Difference between revisions of "Documentation/Nightly/ModuleExtensionListing"

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<noinclude>{{:Documentation/Nightly/ModuleExtensionListing/TOC}}</noinclude>
 
<noinclude>{{:Documentation/Nightly/ModuleExtensionListing/TOC}}</noinclude>
= Modules by name =
 
217 modules:
 
* [http://www.nitrc.org/projects/abc ABC]    <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small>
 
* [[Documentation/Nightly/Modules/ACPCTransform|ACPCTransform]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/AddScalarVolumes|Add Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/AirwaySegmentation|Airway Segmentation]]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation] extension)</small>
 
* [[Documentation/Nightly/Extensions/AirwaySegmentation|Airway Segmentation CLI]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/AirwaySegmentation|Airway Segmentation]] extension)</small>
 
* [[Documentation/Nightly/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Extensions/CMFreg|Apply Matrix]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|Beams]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/IASEM|Bin Shrink]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/Nightly/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/Nightly/Modules/BRAINSDemonWarp|BRAINSDemon Warp]]    <small>(cli, built-in)</small>
 
* BRAINSDWICleanup    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/BRAINSFit|BRAINSFit]]    <small>(cli, built-in)</small>
 
* BRAINSLabel Stats    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/BRAINSResample|BRAINSResample]]    <small>(cli, built-in)</small>
 
* BRAINSResize    <small>(cli, built-in)</small>
 
* BRAINSROIAuto    <small>(cli, built-in)</small>
 
* BRAINSStrip Rotation    <small>(cli, built-in)</small>
 
* BRAINSTransform Convert    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Breach Warning]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
* [[Documentation/Nightly/Modules/CastScalarVolume|Cast Scalar Volume]]    <small>(cli, built-in)</small>
 
* [http://slicer.vmtk.org/ Centerline Computation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/Nightly/Modules/ChangeTracker|Change Tracker]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
* [[Documentation/Nightly/Modules/CheckerBoardFilter|Checker Board Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Extensions/CleaverExtension|Cleaver CLI]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CleaverExtension|Cleaver Extension]] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Boolean REMOVEFilter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Connected Threshold Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Isolated Connected Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/Nightly/Modules/CollectFiducials|Collect Fiducials]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Modules/Colors|Colors]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/CompareVolumes|Compare Volumes]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/ContourComparison|Contour Comparison]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/ContourMorphology|Contour Morphology]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/Contours|Contours]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* [[Documentation/Nightly/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
* [[Documentation/Nightly/Modules/CreateDICOMSeries|Create DICOMSeries]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Create Models]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Modules/CropVolume|Crop Volume]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]] extension)</small>
 
* [[Documentation/Nightly/Modules/Data|Data]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/DataProbe|Data Probe]]    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Modules/DataStore|Data Store]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/DiceComputation|Dice Computation]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/DiceComputation|Dice Computation]] extension)</small>
 
* [[Documentation/Nightly/Modules/DICOM|DICOM]]    <small>(scripted, built-in)</small>
 
* DICOM2Full Brain Tractography    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|Dicom Rt Import Export]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/DicomSroExport|Dicom Sro Export]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/DicomSroImport|Dicom Sro Import]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/DiffusionTensorScalarMeasurements|Diffusion Tensor Scalar Measurements]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Extensions/ErodeDilateLabel|Dilate Label]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
 
* [[Documentation/Nightly/Modules/DoseAccumulation|Dose Accumulation]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/DoseComparison|Dose Comparison]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/DoseVolumeHistogram|Dose Volume Histogram]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|Dvh Comparison]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* DWIConvert    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/DWIToDTIEstimation|DWITo DTIEstimation]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/EMSegment|EMSegment]]    <small>(loadable, built-in)</small>
 
* EMSegment Command Line    <small>(cli, built-in)</small>
 
* EMSegment Quick    <small>(loadable, built-in)</small>
 
* EMSegment Transform To New Format    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/Endoscopy|Endoscopy]]    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Label]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
 
* [[Documentation/Nightly/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/FastGrowCut|Fast Grow Cut]]    <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small>
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
* Fiber Bundle Label Select    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]]    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|Fiber Compare]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* Fiber Tract Measurements    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/FiducialRegistration|Fiducial Registration]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Fiducial Registration Wizard]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Fiducials To Model Registration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/Nightly/Modules/FinslerTractography|Finsler Tractography]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/Nightly/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]]    <small>(cli, built-in)</small>
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo]    <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
* [[Documentation/Nightly/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/GrayscaleGrindPeakImageFilter|Grayscale Grind Peak Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/GrayscaleModelMaker|Grayscale Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/GyroGuide|Gyro Guide]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] extension)</small>
 
* [[Documentation/Nightly/Modules/HeterogeneityCAD|Heterogeneity CAD]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] extension)</small>
 
* [[Documentation/Nightly/Modules/HistogramMatching|Histogram Matching]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Extensions/IASEM|IASEMImport]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/Nightly/Extensions/IASEM|IASEMImport Series]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/Nightly/Extensions/MABMIS|IGR3D MABMIS Testing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] extension)</small>
 
* [[Documentation/Nightly/Extensions/MABMIS|IGR3D MABMIS Training]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] extension)</small>
 
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/Nightly/Modules/ImageLabelCombine|Image Label Combine]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/IntensityDifferenceMetric|Intensity Difference Metric]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
* [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small>
 
* [[Documentation/Nightly/Modules/Isodose|Isodose]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter KUtil]    <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
* [[Documentation/Nightly/Modules/LabelAddition|Label Addition]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/LabelExtraction|Label Extraction]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/LabelMapSmoothing|Label Map Smoothing]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Extensions/IASEM|Label Object Statistics]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/Nightly/Extensions/Reporting|Label To DICOMSEGConverter]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/Reporting|Reporting]] extension)</small>
 
* [[Documentation/Nightly/Modules/LandmarkRegistration|Landmark Registration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
* [[Documentation/Nightly/Modules/LASegmentationWorkflow|LASegmentation Workflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/Nightly/Extensions/LightWeightRobotIGT|Light Weight Robot IGT]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/LightWeightRobotIGT|Light Weight Robot IGT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/Nightly/Modules/Markups|Markups]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/MaskScalarVolume|Mask Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/MedianImageFilter|Median Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/MergeModels|Merge Models]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|Merge Stat With Fiber]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/Nightly/Modules/MeshCompression|Mesh Compression]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]] extension)</small>
 
* [[Documentation/Nightly/Extensions/MultidimData|Metafile Importer]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/Nightly/Modules/ModelMaker|Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/Models|Models]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/ModelToLabelMap|Model To Label Map]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/MultiplyScalarVolumes|Multiply Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
* [[Documentation/Nightly/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/OpenIGTLinkIF|Open IGTLink IF]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/OpenIGTLinkRemote|Open IGTLink Remote]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Modules/OrientScalarVolume|Orient Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/PathExplorer|Path Explorer]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] extension)</small>
 
* [[Documentation/Nightly/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small>
 
* Perform Metric Test    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/PerkEvaluator|Perk Evaluator]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/Nightly/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Pivot Calibration]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PkModeling|Pk Modeling]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|Planar Image]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|plastimatch slicer bspline]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|plastimatch slicer dicomrt export]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|plastimatch slicer dicomrt import]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|plastimatch slicer landwarp]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|plastimatch slicer xformwarp]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|Plastimatch Py]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|Plm Register]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/PlusRemote|Plus Remote]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Modules/PortPlacement|Port Placement]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]] extension)</small>
 
* [[Documentation/Nightly/Modules/ProbeVolumeWithModel|Probe Volume With Model]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Extensions/PerkTutor|Python Metrics Calculator]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/Nightly/Modules/Reformat|Reformat]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Extensions/Reporting|Reporting]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/Reporting|Reporting]] extension)</small>
 
* [[Documentation/Nightly/Modules/ResampleDTIVolume|Resample DTIVolume]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ResampleScalarVectorDWIVolume|Resample Scalar Vector DWIVolume]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ResectionVolume|Resection Volume]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ResectionPlanner|Resection Planner]] extension)</small>
 
* [[Documentation/Nightly/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/SampleData|Sample Data]]    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Modules/ScarVisualization|Scar Visualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/Nightly/Modules/SceneViews|Scene Views]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
* [[Documentation/Nightly/Modules/SegmentCAD|Segment CAD]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] extension)</small>
 
* [[Documentation/Nightly/Extensions/MultidimData|Sequence Browser]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/Nightly/Extensions/MultidimData|Sequences]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/Nightly/Modules/SimpleFilters|Simple Filters]]    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Modules/SimpleRegionGrowingSegmentation|Simple Region Growing Segmentation]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small>
 
* [[Documentation/Nightly/Modules/SobolevSegmenter|Sobolev Segmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SobolevSegmenter|Sobolev Segmenter]] extension)</small>
 
* [[Documentation/Nightly/Extensions/IASEM|Spacing Aware Curvature Diffusion]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/Nightly/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
* [[Documentation/Nightly/Modules/SubjectHierarchy|Subject Hierarchy]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/SubtractScalarVolumes|Subtract Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Extensions/CMFreg|Surface Registration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/SurfaceToolbox|Surface Toolbox]]    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
* [[Documentation/Nightly/Modules/SwissSkullStripper|Swiss Skull Stripper]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]] extension)</small>
 
* [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]] extension)</small>
 
* [[Documentation/Nightly/Modules/ThingiverseBrowser|Thingiverse Browser]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ThingiverseBrowser|Thingiverse Browser]] extension)</small>
 
* [[Documentation/Nightly/Modules/ThresholdScalarVolume|Threshold Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/TrackerStabilizer|Tracker Stabilizer]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small>
 
* [[Documentation/Nightly/Modules/TractographyDisplay|Tractography Display]]    <small>(loadable, built-in)</small>
 
* Tractography Interactive Seeding    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Transform Fusion]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Modules/TransformRecorder|Transform Recorder]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/Nightly/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Ultrasound Snapshots]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Modules/Units|Units]]    <small>(loadable, built-in)</small>
 
* VBRAINSDemon Warp    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/VectorToScalarVolume|Vector To Scalar Volume]]    <small>(scripted, built-in)</small>
 
* [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|Vff File Reader]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip With Model]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip]] extension)</small>
 
* [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip With Roi]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip]] extension)</small>
 
* [[Documentation/Nightly/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/VolumeResliceDriver|Volume Reslice Driver]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Modules/Volumes|Volumes]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/VotingBinaryHoleFillingImageFilter|Voting Binary Hole Filling Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/Welcome|Welcome]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small>
 
* [[Documentation/Nightly/Modules/WorkflowSegmentation|Workflow Segmentation]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/Nightly/Extensions/XNATSlicer|Xnat Slicer]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] extension)</small>
 
 
= Modules by category =
 
= Modules by category =
36 categories:
+
46 categories:
* [[#BRAINS|BRAINS]]
+
* [[#Modules_by_category_Astronomy|Astronomy]]
** [[#LabelStatistics|Label Statistics]]
+
* [[#Modules_by_category_Cardiac|Cardiac]]
* [[#Cardiac_MRI_Toolkit|Cardiac MRI Toolkit]]
+
* [[#Modules_by_category_Cardiac_MRI_Toolkit|Cardiac MRI Toolkit]]
* [[#CMF_Registration|CMF Registration]]
+
* [[#Modules_by_category_Chest_Imaging_Platform|Chest Imaging Platform]]
** [[#Voxelbase_Registration|Voxelbase Registration]]
+
** [[#Modules_by_category_Chest_Imaging_Platform_Toolkit|Toolkit]]
* [[#Converters|Converters]]
+
*** [[#Modules_by_category_Toolkit_Particles|Particles]]
* [[#Developer_Tools|Developer Tools]]
+
*** [[#Modules_by_category_Toolkit_Processing|Processing]]
** [[#DICOM_Plugins|DICOM Plugins]]
+
*** [[#Modules_by_category_Toolkit_Quantification|Quantification]]
** [[#Editor_Extensions|Editor Extensions]]
+
*** [[#Modules_by_category_Toolkit_Registration|Registration]]
** [[#Matlab|Matlab]]
+
*** [[#Modules_by_category_Toolkit_Segmentation|Segmentation]]
* [[#Diffusion|Diffusion]]
+
*** [[#Modules_by_category_Toolkit_Utils|Utils]]
** [[#Diffusion_Data_Conversion|Diffusion Data Conversion]]
+
* [[#Modules_by_category_CIP|CIP]]
** [[#Diffusion_Tensor_Images|Diffusion Tensor Images]]
+
* [[#Modules_by_category_Converters|Converters]]
** [[#Diffusion_Weighted_Images|Diffusion Weighted Images]]
+
* [[#Modules_by_category_Developer_Tools|Developer Tools]]
** [[#FiberAnalysis|Fiber Analysis]]
+
** [[#Modules_by_category_Developer_Tools_DICOM_Plugins|DICOM Plugins]]
** [[#Tractography|Tractography]]
+
** [[#Modules_by_category_Developer_Tools_Editor_Extensions|Editor Extensions]]
* [[#Editor_Effects|Editor Effects]]
+
** [[#Modules_by_category_Developer_Tools_Matlab|Matlab]]
* [[#Endoscopy|Endoscopy]]
+
** [[#Modules_by_category_Developer_Tools_Segment_Editor_Extensions|Segment Editor Extensions]]
* [[#Examples|Examples]]
+
** [[#Modules_by_category_Developer_Tools_Utils|Utils]]
* [[#Exporter|Exporter]]
+
* [[#Modules_by_category_Diffusion|Diffusion]]
* [[#File|File]]
+
** [[#Modules_by_category_Diffusion_Diffusion_Data_Conversion|Diffusion Data Conversion]]
* [[#Filtering|Filtering]]
+
** [[#Modules_by_category_Diffusion_Diffusion_Tensor_Images|Diffusion Tensor Images]]
** [[#Arithmetic|Arithmetic]]
+
** [[#Modules_by_category_Diffusion_Diffusion_Weighted_Images|Diffusion Weighted Images]]
** [[#Denoising|Denoising]]
+
** [[#Modules_by_category_Diffusion_Import_and_Export|Import and Export]]
** [[#Morphology|Morphology]]
+
** [[#Modules_by_category_Diffusion_Process|Process]]
* [[#IGT|IGT]]
+
** [[#Modules_by_category_Diffusion_Quantify|Quantify]]
* [[#Informatics|Informatics]]
+
** [[#Modules_by_category_Diffusion_Tractography|Tractography]]
* [[#Legacy|Legacy]]
+
*** [[#Modules_by_category_Tractography_Region-based|Region-based]]
** [[#Converters|Converters]]
+
** [[#Modules_by_category_Diffusion_Utilities|Utilities]]
** [[#Diffusion|Diffusion]]
+
* [[#Modules_by_category_Editor_Effects|Editor Effects]]
*** [[#Denoising|Denoising]]
+
* [[#Modules_by_category_EditorEffect|EditorEffect]]
*** [[#Diffusion_Data_Conversion|Diffusion Data Conversion]]
+
* [[#Modules_by_category_Endoscopy|Endoscopy]]
** [[#Filtering|Filtering]]
+
* [[#Modules_by_category_Examples|Examples]]
** [[#Registration|Registration]]
+
* [[#Modules_by_category_Exporter|Exporter]]
** [[#Work_in_Progress|Work in Progress]]
+
* [[#Modules_by_category_Filter|Filter]]
*** [[#Diffusion_Tensor|Diffusion Tensor]]
+
* [[#Modules_by_category_Filtering|Filtering]]
**** [[#Test|Test]]
+
** [[#Modules_by_category_Filtering_Arithmetic|Arithmetic]]
* [[#Mesh_Generation|Mesh Generation]]
+
** [[#Modules_by_category_Filtering_Denoising|Denoising]]
* [[#MeshGeneration|Mesh Generation]]
+
** [[#Modules_by_category_Filtering_Morphology|Morphology]]
* [[#Microscopy|Microscopy]]
+
* [[#Modules_by_category_IGT|IGT]]
* [[#Multidimensional_data|Multidimensional data]]
+
* [[#Modules_by_category_Informatics|Informatics]]
* [[#MultiVolume_Support|Multi Volume Support]]
+
** [[#Modules_by_category_Informatics_Converters|Converters]]
* [[#Perk_Tutor|Perk Tutor]]
+
* [[#Modules_by_category_Legacy|Legacy]]
* [[#Plastimatch|Plastimatch]]
+
** [[#Modules_by_category_Legacy_Converters|Converters]]
** [[#Registration|Registration]]
+
** [[#Modules_by_category_Legacy_Filtering|Filtering]]
** [[#Utilities|Utilities]]
+
** [[#Modules_by_category_Legacy_Registration|Registration]]
* [[#Quantification|Quantification]]
+
** [[#Modules_by_category_Legacy_Work_in_Progress|Work in Progress]]
** [[#ChangeQuantification|Change Quantification]]
+
*** [[#Modules_by_category_Work_in_Progress_Diffusion_Tensor|Diffusion Tensor]]
* [[#Radiotherapy|Radiotherapy]]
+
**** [[#Modules_by_category_Diffusion_Tensor_Test|Test]]
* [[#Registration|Registration]]
+
* [[#Modules_by_category_Libraries|Libraries]]
** [[#Specialized|Specialized]]
+
* [[#Modules_by_category_Machine_Learning|Machine Learning]]
* [[#Segmentation|Segmentation]]
+
* [[#Modules_by_category_Margin_Calculator|Margin Calculator]]
** [[#Specialized|Specialized]]
+
* [[#Modules_by_category_Mesh_Generation|Mesh Generation]]
* [[#Shape_Analysis|Shape Analysis]]
+
* [[#Modules_by_category_MeshGeneration|MeshGeneration]]
* [[#Slicelets|Slicelets]]
+
* [[#Modules_by_category_Microscopy|Microscopy]]
* [[#Surface_Models|Surface Models]]
+
* [[#Modules_by_category_MultiVolume_Support|MultiVolume Support]]
* [[#Testing|Testing]]
+
* [[#Modules_by_category_Pathology|Pathology]]
** [[#IGT_Tests|IGT Tests]]
+
* [[#Modules_by_category_Perk_Tutor|Perk Tutor]]
** [[#SlicerRT_Tests|Slicer RT Tests]]
+
* [[#Modules_by_category_Plastimatch|Plastimatch]]
** [[#TestCases|Test Cases]]
+
** [[#Modules_by_category_Plastimatch_Registration|Registration]]
* [[#Unspecified|Unspecified]]
+
** [[#Modules_by_category_Plastimatch_Utilities|Utilities]]
* [[#Utilities|Utilities]]
+
* [[#Modules_by_category_Quantification|Quantification]]
** [[#BRAINS|BRAINS]]
+
** [[#Modules_by_category_Quantification_ChangeQuantification|ChangeQuantification]]
* [[#Vascular_Modeling_Toolkit|Vascular Modeling Toolkit]]
+
* [[#Modules_by_category_Radiology|Radiology]]
* [[#Wizards|Wizards]]
+
* [[#Modules_by_category_Radiotherapy|Radiotherapy]]
* [[#Work_in_Progress|Work in Progress]]
+
* [[#Modules_by_category_Registration|Registration]]
** [[#Converters|Converters]]
+
** [[#Modules_by_category_Registration_CMF_Registration|CMF Registration]]
** [[#Informatics|Informatics]]
+
*** [[#Modules_by_category_CMF_Registration_Voxelbase_Registration|Voxelbase Registration]]
*** [[#TestCases|Test Cases]]
+
** [[#Modules_by_category_Registration_Label_Registration|Label Registration]]
* [[#XNATSlicer|XNATSlicer]]
+
** [[#Modules_by_category_Registration_Specialized|Specialized]]
== BRAINS ==
+
* [[#Modules_by_category_Segmentation|Segmentation]]
=== LabelStatistics ===
+
** [[#Modules_by_category_Segmentation_Specialized|Specialized]]
* BRAINSLabel Stats   <small>(cli, built-in)</small>
+
* [[#Modules_by_category_Sequences|Sequences]]
 +
* [[#Modules_by_category_Slicelets|Slicelets]]
 +
* [[#Modules_by_category_SlicerProstate|SlicerProstate]]
 +
* [[#Modules_by_category_Surface_Models|Surface Models]]
 +
* [[#Modules_by_category_TestCases|TestCases]]
 +
* [[#Modules_by_category_Testing|Testing]]
 +
** [[#Modules_by_category_Testing_IGT_Tests|IGT Tests]]
 +
** [[#Modules_by_category_Testing_SlicerRT_Tests|SlicerRT Tests]]
 +
** [[#Modules_by_category_Testing_TestCases|TestCases]]
 +
* [[#Modules_by_category_Ultrasound|Ultrasound]]
 +
* [[#Modules_by_category_Uncategorized|Uncategorized]]
 +
* [[#Modules_by_category_Utilities|Utilities]]
 +
** [[#Modules_by_category_Utilities_BRAINS|BRAINS]]
 +
* [[#Modules_by_category_Vascular_Modeling_Toolkit|Vascular Modeling Toolkit]]
 +
* [[#Modules_by_category_Virtual_Reality|Virtual Reality]]
 +
* [[#Modules_by_category_Web_System_Tools|Web System Tools]]
 +
* [[#Modules_by_category_Wizards|Wizards]]
 +
* [[#Modules_by_category_XNATSlicer|XNATSlicer]]
 +
<span id='Modules_by_category_Astronomy'></span>
 +
== Astronomy ==
 +
* [[Documentation/Nightly/Modules/AstroVolume|AstroVolume]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerAstro|SlicerAstro]] extension)</small>
 +
* [[Documentation/Nightly/Modules/AstroReproject|AstroReproject]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerAstro|SlicerAstro]] extension)</small>
 +
* [[Documentation/Nightly/Modules/AstroStatistics|AstroStatistics]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerAstro|SlicerAstro]] extension)</small>
 +
* [[Documentation/Nightly/Modules/AstroMasking|AstroMasking]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerAstro|SlicerAstro]] extension)</small>
 +
* [[Documentation/Nightly/Modules/AstroSmoothing|AstroSmoothing]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerAstro|SlicerAstro]] extension)</small>
 +
* [[Documentation/Nightly/Modules/AstroSampleData|AstroSampleData]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerAstro|SlicerAstro]] extension)</small>
 +
* [[Documentation/Nightly/Modules/AstroProfiles|AstroProfiles]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerAstro|SlicerAstro]] extension)</small>
 +
* [[Documentation/Nightly/Modules/AstroMomentMaps|AstroMomentMaps]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerAstro|SlicerAstro]] extension)</small>
 +
* [[Documentation/Nightly/Modules/AstroPVSlice|AstroPVSlice]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerAstro|SlicerAstro]] extension)</small>
 +
* [[Documentation/Nightly/Modules/AstroPVDiagram|AstroPVDiagram]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerAstro|SlicerAstro]] extension)</small>
 +
* [[Documentation/Nightly/Modules/AstroModeling|AstroModeling]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerAstro|SlicerAstro]] extension)</small>
 +
* [[Documentation/Nightly/Modules/AstroWelcome|AstroWelcome]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerAstro|SlicerAstro]] extension)</small>
 +
* [[Documentation/Nightly/Modules/SlicerAstroDataProbe|SlicerAstroDataProbe]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerAstro|SlicerAstro]] extension)</small>
 +
<span id='Modules_by_category_Cardiac'></span>
 +
 
 +
== Cardiac ==
 +
* [[Documentation/Nightly/Extensions/SlicerHeart|Philips4dUsDicomPatcher]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerHeart|SlicerHeart]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/SlicerHeart|ValveView]]   <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerHeart|SlicerHeart]] extension)</small>
 +
<span id='Modules_by_category_Cardiac_MRI_Toolkit'></span>
 
== Cardiac MRI Toolkit ==
 
== Cardiac MRI Toolkit ==
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Connected Threshold Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
+
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkitPVAntrumCut]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac_MRI_Toolkit] extension)</small>
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Isolated Connected Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
+
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkitBooleanREMOVEFilter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac_MRI_Toolkit] extension)</small>
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
+
* [[Documentation/Nightly/Modules/LASegmentationWorkflow|LASegmentationWorkflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac_MRI_Toolkit] extension)</small>
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
+
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkitRegistrationBRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac_MRI_Toolkit] extension)</small>
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
+
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkitAutomaticLeftAtrialScar]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac_MRI_Toolkit] extension)</small>
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
+
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkitConnectedThresholdFilter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac_MRI_Toolkit] extension)</small>
* [[Documentation/Nightly/Modules/ScarVisualization|Scar Visualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
+
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkitWizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac_MRI_Toolkit] extension)</small>
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Boolean REMOVEFilter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
+
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkitIsolatedConnectedFilter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac_MRI_Toolkit] extension)</small>
* [[Documentation/Nightly/Modules/LASegmentationWorkflow|LASegmentation Workflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
+
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkitInhomogeneityCorrection]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac_MRI_Toolkit] extension)</small>
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
+
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkitAxialDilate]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac_MRI_Toolkit] extension)</small>
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
+
* [[Documentation/Nightly/Modules/ScarVisualization|ScarVisualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac_MRI_Toolkit] extension)</small>
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
+
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkitRegistration]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac_MRI_Toolkit] extension)</small>
== CMF Registration ==
+
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkitLASegmentationGraphCuts]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac_MRI_Toolkit] extension)</small>
* [[Documentation/Nightly/Extensions/CMFreg|Apply Matrix]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
+
<span id='Modules_by_category_Chest_Imaging_Platform'></span>
* [[Documentation/Nightly/Modules/LandmarkRegistration|Landmark Registration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
+
== Chest Imaging Platform ==
* [[Documentation/Nightly/Extensions/CMFreg|Surface Registration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
+
* [http://www.chestimagingplatform.org CIP_MIPViewer]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Modules/LabelExtraction|Label Extraction]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
+
* [http://www.chestimagingplatform.org CIP_BodyComposition]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Modules/LabelAddition|Label Addition]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
+
* [http://www.chestimagingplatform.org CIP_InteractiveLobeSegmentation]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
+
* [http://www.chestimagingplatform.org CIP_TracheaStentPlanning]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
=== Voxelbase Registration ===
+
* [http://www.chestimagingplatform.org CIP_LesionModel]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
+
* [http://www.chestimagingplatform.org AirwayInspector]    <small>(loadable, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
+
* [http://www.chestimagingplatform.org CIP_PAARatio]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
+
* [http://www.chestimagingplatform.org CIP_CalciumScoring]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org CIP_ParenchymaAnalysis]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org CIP_ParenchymaSubtypeTraining]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org CIP_PointsLabelling]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
<span id='Modules_by_category_Chest_Imaging_Platform_Toolkit'></span>
 +
=== Toolkit ===
 +
<span id='Modules_by_category_Toolkit_Particles'></span>
 +
==== Particles ====
 +
* [http://www.chestimagingplatform.org ExtractParticlesFromChestRegionChestType]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org FilterVesselParticleData]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org RemoveParticlesFromParticlesDataSet]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org PerturbParticles]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org MergeParticleDataSets]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org FilterAirwayParticleData]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org FitLobeSurfaceModelsToParticleData]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org ClassifyFissureParticles]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org GenerateStenciledLabelMapFromParticles]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org FilterFissureParticleData]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
<span id='Modules_by_category_Toolkit_Processing'></span>
 +
==== Processing ====
 +
* [http://www.chestimagingplatform.org ResampleLabelMap]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org RescaleLabelMap]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org GenerateMedianFilteredImage]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org LabelMapFromRegionAndTypePoints]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org CropLung]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org GenerateNLMFilteredImage]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org RemoveChestTypeFromLabelMapUsingParticles]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org GenerateAtlasConvexHull]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org RemapLabelMap]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org ComputeFissureFeatureVectors]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org GenerateLobeSurfaceModels]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org FilterConnectedComponents]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org ExtractChestLabelMap]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org PerformMorphological]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org ExtractFissureBoundaryFromLobeMap]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org EnhanceFissuresInImage]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org GraphCutsOptimization]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org GenerateDistanceMapFromLabelMap]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org ResampleCT]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org ComputeFeatureStrength]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org ComputeDistanceMap]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org QualityControl]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org GenerateImageSubVolumes]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
<span id='Modules_by_category_Toolkit_Quantification'></span>
 +
==== Quantification ====
 +
* [http://www.chestimagingplatform.org EvaluateLungLobeSegmentationResults]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org GetTransformationKappa]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org ReadWriteImageData]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org ComputeIntensityStatistics]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org ComputeCrossSectionalArea]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org GenerateParenchymaPhenotypes]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org LabelParticlesByChestRegionChestType]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org GetTransformationSimilarityMetric]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org GetTransformationKappa2D]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
<span id='Modules_by_category_Toolkit_Registration'></span>
 +
==== Registration ====
 +
*[[:Category:Documentation/Nightly/Modules/Registration|Introduction to Registration]] <small>(by Dominik Meier)</small>
 +
* [http://www.chestimagingplatform.org RegisterLungAtlas]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org RegisterLabelMaps]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org RegisterCT]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
<span id='Modules_by_category_Toolkit_Segmentation'></span>
 +
 
 +
==== Segmentation ====
 +
* [http://www.chestimagingplatform.org GenerateOtsuLungCast]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org SegmentLungAirways]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org SegmentLungLobes]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org GeneratePartialLungLabelMap]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org GenerateSimpleLungMask]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org SplitLeftLungRightLung]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org GenerateBinaryThinning3D]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org GenerateLesionSegmentation]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
<span id='Modules_by_category_Toolkit_Utils'></span>
 +
==== Utils ====
 +
* [http://www.chestimagingplatform.org ConvertDicom]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org RegionTypeLocationsToROIVolume]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org ReadVTKWriteNRRDs]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org GenerateModel]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org GenerateOverlayImages]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org ExecuteSystemCommand]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org GetStructuresInLabelMap]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org FindPatchMatch]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org ConvertChestRegionChestTypeToLabelMapValue]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org MaskOutLabelMapStructures]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org ReadNRRDsWriteVTK]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org ConvertLabelMapValueToChestRegionChestType]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org ReadWriteRegionAndTypePoints]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org MergeChestLabelMaps]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org ReadVidaWriteCIP]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org ReadDicomWriteTags]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org TransferRegionAndTypeIndicesToFromPoints]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
<span id='Modules_by_category_CIP'></span>
 +
== CIP ==
 +
* [http://www.chestimagingplatform.org CIP_]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org CIP_Common]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
<span id='Modules_by_category_Converters'></span>
 
== Converters ==
 
== Converters ==
* [[Documentation/Nightly/Modules/VectorToScalarVolume|Vector To Scalar Volume]]    <small>(scripted, built-in)</small>
+
* [[Documentation/Nightly/Modules/QuadEdgeSurfaceMesher|QuadEdgeSurfaceMesher]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerProstate|SlicerProstate]] extension)</small>
* [[Documentation/Nightly/Modules/CropVolume|Crop Volume]]    <small>(loadable, built-in)</small>
+
* [[Documentation/Nightly/Modules/CropVolume|CropVolume]]    <small>(loadable, built-in)</small>
* [[Documentation/Nightly/Modules/OrientScalarVolume|Orient Scalar Volume]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/OrientScalarVolume|OrientScalarVolume]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/CreateDICOMSeries|Create DICOMSeries]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Extensions/UKFTractography|ConvertVTK]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]] extension)</small>
 +
* [[Documentation/Nightly/Modules/VectorToScalarVolume|VectorToScalarVolume]]    <small>(scripted, built-in)</small>
 +
* [[Documentation/Nightly/Modules/CreateDICOMSeries|CreateDICOMSeries]]    <small>(cli, built-in)</small>
 +
* [http://www.chestimagingplatform.org ParticlesDisplay]    <small>(loadable, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org RegionType]    <small>(loadable, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
<span id='Modules_by_category_Developer_Tools'></span>
 
== Developer Tools ==
 
== Developer Tools ==
* [[Documentation/Nightly/Modules/EventBroker|Event Broker]]
 
* [[Documentation/Nightly/Modules/ExecutionModelTour|Execution Model Tour]]    <small>(cli, built-in)</small>
 
* Double Arrays    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] extension)</small>
 
 
* [[Documentation/Nightly/Modules/Cameras|Cameras]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/Cameras|Cameras]]    <small>(loadable, built-in)</small>
* [[Documentation/Nightly/Modules/ExtensionWizard|Extension Wizard]]    <small>(scripted, built-in)</small>
+
* [[Documentation/Nightly/Modules/ExecutionModelTour|ExecutionModelTour]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/ImageMaker|Image Maker]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/ImageMaker|Image Maker]] extension)</small>
+
* [[Documentation/Nightly/Extensions/DebuggingTools|NodeModifiedStatistics]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/DebuggingTools|DebuggingTools]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/DebuggingTools|PyDevRemoteDebug]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/DebuggingTools|DebuggingTools]] extension)</small>
 +
* [[Documentation/Nightly/Modules/ExtensionWizard|ExtensionWizard]]    <small>(scripted, built-in)</small>
 +
* [[Documentation/Nightly/Extensions/DebuggingTools|NodeInfo]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/DebuggingTools|DebuggingTools]] extension)</small>
 +
* [[Documentation/Nightly/Modules/ImageMaker|ImageMaker]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/ImageMaker|ImageMaker]] extension)</small>
 +
* [[Documentation/Nightly/Modules/ExtensionStats|ExtensionStats]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/DeveloperToolsForExtensions|DeveloperToolsForExtensions]] extension)</small>
 +
* [[Documentation/Nightly/Modules/DeveloperToolsForExtensions|DeveloperToolsForExtensions]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/DeveloperToolsForExtensions|DeveloperToolsForExtensions]] extension)</small>
 +
* [[Documentation/Nightly/Modules/EventBroker|EventBroker]]
 +
* DoubleArrays    <small>(loadable, built-in)</small>
 +
<span id='Modules_by_category_Developer_Tools_DICOM_Plugins'></span>
 
=== DICOM Plugins ===
 
=== DICOM Plugins ===
* DICOMLongitudinal PETCTPlugin
+
* DICOMParametricMapPlugin
 +
* DicomUltrasoundPlugin
 +
* DICOMSegmentationPlugin
 +
* DICOMSlicerDataBundlePlugin
 +
* DICOMTID1500Plugin
 +
* [[Documentation/Nightly/Modules/DICOMPETSUVPlugin|DICOMPETSUVPlugin]]
 +
* DICOMScalarVolumePlugin
 +
* DICOMDiffusionVolumePlugin
 +
* DICOMLongitudinalPETCTPlugin
 +
* DicomSroImportPlugin
 
* [[Documentation/Nightly/Modules/DICOMRWVMPlugin|DICOMRWVMPlugin]]
 
* [[Documentation/Nightly/Modules/DICOMRWVMPlugin|DICOMRWVMPlugin]]
* Multi Volume Importer Plugin
+
* DicomRtImportExportPlugin
* [[Documentation/Nightly/Modules/DICOMPETSUVPlugin|DICOMPETSUVPlugin]]
+
* MultiVolumeImporterPlugin
* DICOMDiffusion Volume Plugin
+
<span id='Modules_by_category_Developer_Tools_Editor_Extensions'></span>
* DICOMSegmentation Plugin
 
* Dicom Sro Import Plugin
 
* DICOMScalar Volume Plugin
 
* Dicom Rt Import Export Plugin
 
* DICOMSlicer Data Bundle Plugin
 
 
=== Editor Extensions ===
 
=== Editor Extensions ===
* [[Documentation/Nightly/Extensions/IASEM|Binary Watershed Effect]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
+
* [[Documentation/4.3/Modules/FastGrowCut|FastGrowCutEffect]]    <small>(scripted, bundled in [[Documentation/4.3/Modules/FastGrowCut|FastGrowCutEffect]] extension)</small>
* [[Documentation/Nightly/Extensions/IASEM|Double Threshold Effect]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
+
* [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|CarreraSliceEffect]]    <small>(scripted, bundled in [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|CarreraSlice]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/SlicerPathology|QuickTCGAEffect]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerPathology|SlicerPathology]] extension)</small>
 +
* [[Documentation/Nightly/Modules/PETTumorSegmentationEffect|PETTumorSegmentationEffect]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PETTumorSegmentation|PETTumorSegmentation]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/IASEM|BinaryWatershedEffect]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/IASEM|DoubleThresholdEffect]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/SlicerPathology|ShortCutEffect]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerPathology|SlicerPathology]] extension)</small>
 +
<span id='Modules_by_category_Developer_Tools_Matlab'></span>
 
=== Matlab ===
 
=== Matlab ===
* [[Documentation/Nightly/Modules/MatlabCommander|Matlab Commander]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
+
* [[Documentation/Nightly/Modules/MatlabModuleGenerator|MatlabModuleGenerator]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|MatlabBridge]] extension)</small>
* [[Documentation/Nightly/Modules/MatlabModuleGenerator|Matlab Module Generator]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
+
* [[Documentation/Nightly/Modules/MatlabCommander|MatlabCommander]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|MatlabBridge]] extension)</small>
 +
<span id='Modules_by_category_Developer_Tools_Segment_Editor_Extensions'></span>
 +
=== Segment Editor Extensions ===
 +
* [[Documentation/Nightly/Extensions/PETTumorSegmentation|SegmentEditorPETTumor]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PETTumorSegmentation|PETTumorSegmentation]] extension)</small>
 +
<span id='Modules_by_category_Developer_Tools_Utils'></span>
 +
=== Utils ===
 +
* [[Documentation/Nightly/Extensions/SlicerProstate|SlicerProstate]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerProstate|SlicerProstate]] extension)</small>
 +
<span id='Modules_by_category_Diffusion'></span>
 
== Diffusion ==
 
== Diffusion ==
* [[Documentation/Nightly/Modules/TractographyDisplay|Tractography Display]]    <small>(loadable, built-in)</small>
+
* [[Documentation/Nightly/Modules/DMRIInstall|DMRIInstall]]    <small>(scripted, built-in)</small>
* DICOM2Full Brain Tractography    <small>(scripted, built-in)</small>
+
<span id='Modules_by_category_Diffusion_Diffusion_Data_Conversion'></span>
 
=== Diffusion Data Conversion ===
 
=== Diffusion Data Conversion ===
 
* DWIConvert    <small>(cli, built-in)</small>
 
* DWIConvert    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Diffusion_Diffusion_Tensor_Images'></span>
 
=== Diffusion Tensor Images ===
 
=== Diffusion Tensor Images ===
* [[Documentation/Nightly/Modules/ResampleDTIVolume|Resample DTIVolume]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Extensions/ResampleDTIlogEuclidean|ResampleDTIlogEuclidean]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/ResampleDTIlogEuclidean|ResampleDTIlogEuclidean]] extension)</small>
* [[Documentation/Nightly/Modules/DiffusionTensorScalarMeasurements|Diffusion Tensor Scalar Measurements]]   <small>(cli, built-in)</small>
+
<span id='Modules_by_category_Diffusion_Diffusion_Weighted_Images'></span>
* Fiber Tract Measurements    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]]    <small>(cli, built-in)</small>
 
* Tractography Interactive Seeding    <small>(loadable, built-in)</small>
 
 
=== Diffusion Weighted Images ===
 
=== Diffusion Weighted Images ===
* [[Documentation/Nightly/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]]   <small>(cli, built-in)</small>
+
* BRAINSDWICleanup   <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/ResampleScalarVectorDWIVolume|Resample Scalar Vector DWIVolume]]    <small>(cli, built-in)</small>
+
<span id='Modules_by_category_Diffusion_Import_and_Export'></span>
* [[Documentation/Nightly/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]]    <small>(cli, built-in)</small>
+
=== Import and Export ===
* [[Documentation/Nightly/Modules/DWIToDTIEstimation|DWITo DTIEstimation]]   <small>(cli, built-in)</small>
+
* DWIConvert   <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/FinslerTractography|Finsler Tractography]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
+
* [[Documentation/Nightly/Extensions/SlicerDMRI|DICOMTract_to_VTK]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|SlicerDMRI]] extension)</small>
* [[Documentation/Nightly/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
+
* [[Documentation/Nightly/Extensions/SlicerDMRI|VTK_to_DICOMTract]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|SlicerDMRI]] extension)</small>
* [[Documentation/Nightly/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]]    <small>(cli, built-in)</small>
+
<span id='Modules_by_category_Diffusion_Process'></span>
=== FiberAnalysis ===
+
=== Process ===
* [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|Fiber Compare]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
+
* [[Documentation/Nightly/Modules/DiffusionWeightedVolumeMasking|DiffusionWeightedVolumeMasking]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|SlicerDMRI]] extension)</small>
* [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
+
* [[Documentation/Nightly/Modules/DWIToDTIEstimation|DWIToDTIEstimation]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|SlicerDMRI]] extension)</small>
* [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|Merge Stat With Fiber]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
+
<span id='Modules_by_category_Diffusion_Quantify'></span>
* [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
+
=== Quantify ===
 +
* [[Documentation/Nightly/Modules/DiffusionTensorScalarMeasurements|DiffusionTensorScalarMeasurements]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|SlicerDMRI]] extension)</small>
 +
* [[Documentation/Nightly/Modules/FiberTractMeasurements|FiberTractMeasurements]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|SlicerDMRI]] extension)</small>
 +
<span id='Modules_by_category_Diffusion_Tractography'></span>
 
=== Tractography ===
 
=== Tractography ===
* [[Documentation/Nightly/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]]    <small>(scripted, built-in)</small>
+
* [[Documentation/Nightly/Modules/TractographyInteractiveSeeding|TractographyInteractiveSeeding]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|SlicerDMRI]] extension)</small>
 +
* [[Documentation/Nightly/Modules/TractographyDisplay|TractographyDisplay]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|SlicerDMRI]] extension)</small>
 
* [[Documentation/Nightly/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* [[Documentation/Nightly/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]] extension)</small>
* Fiber Bundle Label Select   <small>(cli, built-in)</small>
+
<span id='Modules_by_category_Tractography_Region-based'></span>
 +
==== Region-based ====
 +
* [[Documentation/Nightly/Modules/TractographyLabelMapSeeding|TractographyLabelMapSeeding]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|SlicerDMRI]] extension)</small>
 +
* [[Documentation/Nightly/Modules/FiberBundleLabelSelect|FiberBundleLabelSelect]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|SlicerDMRI]] extension)</small>
 +
<span id='Modules_by_category_Diffusion_Utilities'></span>
 +
=== Utilities ===
 +
* BRAINSDWICleanup   <small>(cli, built-in)</small>
 +
* [[Documentation/Nightly/Modules/ResampleDTIVolume|ResampleDTIVolume]]    <small>(cli, built-in)</small>
 +
* [[Documentation/Nightly/Modules/FiberBundleToLabelMap|FiberBundleToLabelMap]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|SlicerDMRI]] extension)</small>
 +
* [[Documentation/Nightly/Modules/ResampleScalarVectorDWIVolume|ResampleScalarVectorDWIVolume]]    <small>(cli, built-in)</small>
 +
* [[Documentation/Nightly/Extensions/SlicerDMRI|DICOM2FullBrainTractography]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|SlicerDMRI]] extension)</small>
 +
<span id='Modules_by_category_Editor_Effects'></span>
 
== Editor Effects ==
 
== Editor Effects ==
* [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small>
+
* [[Documentation/Nightly/Extensions/WindowLevelEffect|WindowLevelEffect]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/WindowLevelEffect|WindowLevelEffect]] extension)</small>
 +
<span id='Modules_by_category_EditorEffect'></span>
 +
== EditorEffect ==
 +
* [[Documentation/Nightly/Extensions/PETTumorSegmentation|PETTumorSegmentation]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PETTumorSegmentation|PETTumorSegmentation]] extension)</small>
 +
<span id='Modules_by_category_Endoscopy'></span>
 
== Endoscopy ==
 
== Endoscopy ==
 
* [[Documentation/Nightly/Modules/Endoscopy|Endoscopy]]    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Modules/Endoscopy|Endoscopy]]    <small>(scripted, built-in)</small>
 +
<span id='Modules_by_category_Examples'></span>
 
== Examples ==
 
== Examples ==
* [[Documentation/Nightly/Modules/FastGrowCut|Fast Grow Cut]]    <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small>
+
* [[Documentation/Nightly/Modules/FastGrowCut|FastGrowCut]]    <small>(loadable, bundled in [[Documentation/4.3/Modules/FastGrowCut|FastGrowCutEffect]] extension)</small>
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
+
* [[Documentation/Nightly/Extensions/SlicerPathology|QuickTCGA]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerPathology|SlicerPathology]] extension)</small>
* [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
+
* [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|FastGrowCutSegmenter]]    <small>(loadable, bundled in [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|CarreraSlice]] extension)</small>
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
+
* [[Documentation/Nightly/Extensions/SlicerPathology|ShortCutCore]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerPathology|SlicerPathology]] extension)</small>
 +
* [http://publish.uwo.ca/~dchen285/GraphCutSegment/GraphCutSegment.html GraphCutInteractiveSegmenter]    <small>(loadable, bundled in [http://publish.uwo.ca/~dchen285/GraphCutSegment/GraphCutSegment.html GraphCutSegment] extension)</small>
 +
* [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|CarreraSlice]]    <small>(loadable, bundled in [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|CarreraSlice]] extension)</small>
 +
<span id='Modules_by_category_Exporter'></span>
 
== Exporter ==
 
== Exporter ==
* [[Documentation/Nightly/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small>
+
* [[Documentation/Nightly/Modules/SlicerToKiwiExporter|SlicerToKiwiExporter]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|SlicerToKiwiExporter]] extension)</small>
== File ==
+
<span id='Modules_by_category_Filter'></span>
* [[Documentation/Nightly/Extensions/UKFTractography|Convert VTK]]   <small>(cli, bundled in [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]] extension)</small>
+
== Filter ==
 +
* IslandRemoval   <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Filtering'></span>
 
== Filtering ==
 
== Filtering ==
* [[Documentation/Nightly/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/SegmentationSmoothing|SegmentationSmoothing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerProstate|SlicerProstate]] extension)</small>
* [[Documentation/Nightly/Modules/ThresholdScalarVolume|Threshold Scalar Volume]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/N4ITKBiasFieldCorrection|N4ITKBiasFieldCorrection]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/ImageLabelCombine|ImageLabelCombine]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/SimpleFilters|Simple Filters]]    <small>(scripted, built-in)</small>
+
* [[Documentation/Nightly/Modules/VotingBinaryHoleFillingImageFilter|VotingBinaryHoleFillingImageFilter]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/ImageLabelCombine|Image Label Combine]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/CheckerBoardFilter|CheckerBoardFilter]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/VotingBinaryHoleFillingImageFilter|Voting Binary Hole Filling Image Filter]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/AstroSmoothing|AstroSmoothing]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerAstro|SlicerAstro]] extension)</small>
* [[Documentation/Nightly/Modules/HistogramMatching|Histogram Matching]]    <small>(cli, built-in)</small>
+
* [https://slicer.readthedocs.io/en/latest/user_guide/modules/extractskeleton.html ExtractSkeleton]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/CheckerBoardFilter|Checker Board Filter]]    <small>(cli, built-in)</small>
+
* [https://slicer.readthedocs.io/en/latest/user_guide/modules/simplefilters.html SimpleFilters]    <small>(scripted, built-in)</small>
 +
* [https://slicer.readthedocs.io/en/latest/user_guide/modules/thresholdscalarvolume.html ThresholdScalarVolume]    <small>(cli, built-in)</small>
 +
* [https://slicer.readthedocs.io/en/latest/user_guide/modules/histogrammatching.html HistogramMatching]    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Filtering_Arithmetic'></span>
 
=== Arithmetic ===
 
=== Arithmetic ===
* [[Documentation/Nightly/Modules/MultiplyScalarVolumes|Multiply Scalar Volumes]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/MultiplyScalarVolumes|MultiplyScalarVolumes]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/AddScalarVolumes|Add Scalar Volumes]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/AddScalarVolumes|AddScalarVolumes]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/CastScalarVolume|Cast Scalar Volume]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/MaskScalarVolume|MaskScalarVolume]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/SubtractScalarVolumes|Subtract Scalar Volumes]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/SubtractScalarVolumes|SubtractScalarVolumes]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/MaskScalarVolume|Mask Scalar Volume]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/CastScalarVolume|CastScalarVolume]]    <small>(cli, built-in)</small>
 +
* [[Documentation/Nightly/Extensions/OpenCVExample|BlendVectorVolumes]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/OpenCVExample|OpenCVExample]] extension)</small>
 +
<span id='Modules_by_category_Filtering_Denoising'></span>
 
=== Denoising ===
 
=== Denoising ===
* [[Documentation/Nightly/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/CurvatureAnisotropicDiffusion|CurvatureAnisotropicDiffusion]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/MedianImageFilter|Median Image Filter]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/GradientAnisotropicDiffusion|GradientAnisotropicDiffusion]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/MedianImageFilter|MedianImageFilter]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/GaussianBlurImageFilter|GaussianBlurImageFilter]]    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Filtering_Morphology'></span>
 
=== Morphology ===
 
=== Morphology ===
* [[Documentation/Nightly/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/GrayscaleFillHoleImageFilter|GrayscaleFillHoleImageFilter]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Label]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
+
* [[Documentation/Nightly/Modules/GrayscaleGrindPeakImageFilter|GrayscaleGrindPeakImageFilter]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Extensions/ErodeDilateLabel|Dilate Label]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
+
<span id='Modules_by_category_IGT'></span>
* [[Documentation/Nightly/Modules/GrayscaleGrindPeakImageFilter|Grayscale Grind Peak Image Filter]]    <small>(cli, built-in)</small>
+
 
 
== IGT ==
 
== IGT ==
* [[Documentation/Nightly/Modules/ResectionVolume|Resection Volume]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ResectionPlanner|Resection Planner]] extension)</small>
+
* [[Documentation/Nightly/Extensions/SlicerIGT|Viewpoint]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
* [[Documentation/Nightly/Extensions/LightWeightRobotIGT|Light Weight Robot IGT]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/LightWeightRobotIGT|Light Weight Robot IGT]] extension)</small>
+
* [[Documentation/Nightly/Modules/CollectFiducials|CollectFiducials]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
* [[Documentation/Nightly/Modules/VolumeResliceDriver|Volume Reslice Driver]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
+
* [[Documentation/Nightly/Extensions/SlicerIGT|TransformFusion]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
* [[Documentation/Nightly/Modules/CollectFiducials|Collect Fiducials]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
+
* [[Documentation/Nightly/Modules/GyroGuide|GyroGuide]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/GyroGuide|GyroGuide]] extension)</small>
* [[Documentation/Nightly/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small>
+
* [[Documentation/Nightly/Extensions/SlicerIGT|PlusModelCatalogBrowser]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
* [[Documentation/Nightly/Extensions/SlicerIGT|Create Models]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
+
* [[Documentation/Nightly/Extensions/SlicerIGT|CreateModels]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
* [[Documentation/Nightly/Modules/PortPlacement|Port Placement]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]] extension)</small>
+
* [[Documentation/Nightly/Extensions/NeedleFinder|NeedleFinder]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/NeedleFinder|NeedleFinder]] extension)</small>
* [[Documentation/Nightly/Modules/OpenIGTLinkIF|Open IGTLink IF]]    <small>(loadable, built-in)</small>
+
* [[Documentation/Nightly/Modules/TrackerStabilizer|TrackerStabilizer]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/TrackerStabilizer|TrackerStabilizer]] extension)</small>
* [[Documentation/Nightly/Modules/TrackerStabilizer|Tracker Stabilizer]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small>
+
* [[Documentation/Nightly/Modules/PathExplorer|PathExplorer]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
* [[Documentation/Nightly/Modules/PathExplorer|Path Explorer]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
+
* [[Documentation/Nightly/Extensions/SlicerIGT|UltrasoundSnapshots]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
* [[Documentation/Nightly/Extensions/SlicerIGT|Ultrasound Snapshots]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
+
* [[Documentation/Nightly/Extensions/SlicerIGT|BreachWarning]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
* [[Documentation/Nightly/Extensions/SlicerIGT|Transform Fusion]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
+
* [[Documentation/Nightly/Extensions/SlicerIGT|FiducialRegistrationWizard]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
* [[Documentation/Nightly/Extensions/SlicerIGT|Breach Warning]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
+
* [[Documentation/Nightly/Extensions/SlicerIGT|ModelRegistration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
* [[Documentation/Nightly/Modules/GyroGuide|Gyro Guide]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] extension)</small>
+
* [[Documentation/Nightly/Modules/ResectionVolume|ResectionVolume]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ResectionPlanner|ResectionPlanner]] extension)</small>
* [[Documentation/Nightly/Extensions/SlicerIGT|Fiducial Registration Wizard]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
+
* [[Documentation/Nightly/Extensions/SlicerIGT|PivotCalibration]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
* [[Documentation/Nightly/Modules/OpenIGTLinkRemote|Open IGTLink Remote]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
+
* [[Documentation/Nightly/Modules/VolumeResliceDriver|VolumeResliceDriver]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
* [[Documentation/Nightly/Modules/PlusRemote|Plus Remote]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
+
* [[Documentation/Nightly/Modules/OpenIGTLinkRemote|OpenIGTLinkRemote]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/iGyne|i Gyne]] extension)</small>
+
* [[Documentation/Nightly/Extensions/SlicerIGT|FiducialsToModelRegistration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
* [[Documentation/Nightly/Extensions/SlicerIGT|Fiducials To Model Registration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
+
* [[Documentation/Nightly/Modules/Watchdog|Watchdog]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
* [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]] extension)</small>
+
* [[Documentation/Nightly/Modules/CornerAnnotation|CornerAnnotation]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|CornerAnnotation]] extension)</small>
* [[Documentation/Nightly/Extensions/SlicerIGT|Pivot Calibration]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
+
* [[Documentation/Nightly/Modules/OpenIGTLinkIF|OpenIGTLinkIF]]    <small>(loadable, built-in)</small>
* [[Documentation/Nightly/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
+
* [[Documentation/Nightly/Extensions/SlicerIGT|MarkupsToModel]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/iGyne|iGyne]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/iGyne|iGyne]] extension)</small>
 +
* [[Documentation/Nightly/Modules/PlusRemote|PlusRemote]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
 +
<span id='Modules_by_category_Informatics'></span>
 
== Informatics ==
 
== Informatics ==
* [[Documentation/Nightly/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
+
* [[Documentation/Nightly/Extensions/DCMQI|tid1500writer]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DCMQI|DCMQI]] extension)</small>
* [[Documentation/Nightly/Modules/Markups|Markups]]    <small>(loadable, built-in)</small>
+
* [[Documentation/Nightly/Extensions/mpReview|mpReviewPreprocessor]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/mpReview|mpReview]] extension)</small>
 +
* [[Documentation/Nightly/Modules/SEG2NRRD|SEG2NRRD]]    <small>(cli)</small>
 +
* [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/DCMQI|segimage2itkimage]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DCMQI|DCMQI]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/mpReview|mpReview]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/mpReview|mpReview]] extension)</small>
 +
* [[Documentation/Nightly/Modules/Tables|Tables]]    <small>(loadable, built-in)</small>
 +
* [[Documentation/Nightly/Modules/Data|Data]]    <small>(loadable, built-in)</small>
 +
* DumpSEGFrame    <small>(cli)</small>
 +
* [[Documentation/Nightly/Extensions/DCMQI|tid1500reader]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DCMQI|DCMQI]] extension)</small>
 +
* Terminologies   <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/Units|Units]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/Units|Units]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/DICOM|DICOM]]    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Modules/DICOM|DICOM]]    <small>(scripted, built-in)</small>
* [[Documentation/Nightly/Modules/SampleData|Sample Data]]    <small>(scripted, built-in)</small>
+
* [[Documentation/Nightly/Modules/SampleData|SampleData]]    <small>(scripted, built-in)</small>
* [[Documentation/Nightly/Modules/SubjectHierarchy|Subject Hierarchy]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/Data|Data]]    <small>(loadable, built-in)</small>
 
 
* [[Documentation/Nightly/Modules/Colors|Colors]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/Colors|Colors]]    <small>(loadable, built-in)</small>
* [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]] extension)</small>
+
* [[Documentation/Nightly/Extensions/CurveMaker|CurveMaker]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CurveMaker|CurveMaker]] extension)</small>
* [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]] extension)</small>
+
* [[Documentation/Nightly/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 +
* [[Documentation/Nightly/Modules/Markups|Markups]]    <small>(loadable, built-in)</small>
 +
* [[Documentation/Nightly/Modules/SubjectHierarchy|SubjectHierarchy]]    <small>(loadable, built-in)</small>
 +
* [[Documentation/Nightly/Extensions/QuantitativeReporting|QuantitativeReporting]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/QuantitativeReporting|QuantitativeReporting]] extension)</small>
 +
<span id='Modules_by_category_Informatics_Converters'></span>
 +
=== Converters ===
 +
* [[Documentation/Nightly/Extensions/DCMQI|itkimage2paramap]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DCMQI|DCMQI]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/DCMQI|paramap2itkimage]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DCMQI|DCMQI]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/DCMQI|itkimage2segimage]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DCMQI|DCMQI]] extension)</small>
 +
* [[Documentation/Nightly/Modules/EncodeSEG|EncodeSEG]]    <small>(cli)</small>
 +
<span id='Modules_by_category_Legacy'></span>
 
== Legacy ==
 
== Legacy ==
 +
<span id='Modules_by_category_Legacy_Converters'></span>
 
=== Converters ===
 
=== Converters ===
* [[Documentation/Nightly/Modules/BSplineToDeformationField|BSpline To Deformation Field]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/BSplineToDeformationField|BSplineToDeformationField]]    <small>(cli, built-in)</small>
=== Diffusion ===
+
<span id='Modules_by_category_Legacy_Filtering'></span>
==== Denoising ====
 
* [[Documentation/Nightly/Modules/DWIUnbiasedNonLocalMeansFilter|DWIUnbiased Non Local Means Filter]]    <small>(cli, built-in)</small>
 
==== Diffusion Data Conversion ====
 
* DTIimport    <small>(cli, built-in)</small>
 
* DTIexport    <small>(cli, built-in)</small>
 
 
=== Filtering ===
 
=== Filtering ===
* [[Documentation/Nightly/Modules/OtsuThresholdImageFilter|Otsu Threshold Image Filter]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/OtsuThresholdImageFilter|OtsuThresholdImageFilter]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/ResampleScalarVolume|Resample Scalar Volume]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/ResampleScalarVolume|ResampleScalarVolume]]    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Legacy_Registration'></span>
 
=== Registration ===
 
=== Registration ===
* Test Grid Transform Registration   <small>(cli, built-in)</small>
+
* TestGridTransformRegistration   <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/ExpertAutomatedRegistration|Expert Automated Registration]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/ExpertAutomatedRegistration|ExpertAutomatedRegistration]]    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Legacy_Work_in_Progress'></span>
 
=== Work in Progress ===
 
=== Work in Progress ===
 +
<span id='Modules_by_category_Work_in_Progress_Diffusion_Tensor'></span>
 
==== Diffusion Tensor ====
 
==== Diffusion Tensor ====
 +
<span id='Modules_by_category_Diffusion_Tensor_Test'></span>
 
===== Test =====
 
===== Test =====
* Diffusion Tensor Test   <small>(cli, built-in)</small>
+
* DiffusionTensorTest   <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Libraries'></span>
 +
== Libraries ==
 +
* [[Documentation/Nightly/Extensions/SlicerOpenCV|OpenCV]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerOpenCV|SlicerOpenCV]] extension)</small>
 +
<span id='Modules_by_category_Machine_Learning'></span>
 +
== Machine Learning ==
 +
* [[Documentation/Nightly/Modules/DeepInfer|DeepInfer]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/DeepInfer|DeepInfer]] extension)</small>
 +
<span id='Modules_by_category_Margin_Calculator'></span>
 +
== Margin Calculator ==
 +
* [[Documentation/Nightly/Extensions/MarginCalculator|MarginCalculator]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/MarginCalculator|MarginCalculator]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/MarginCalculator|DoseMorphology]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MarginCalculator|MarginCalculator]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/MarginCalculator|SyntheticRTDose]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/MarginCalculator|MarginCalculator]] extension)</small>
 +
<span id='Modules_by_category_Mesh_Generation'></span>
 
== Mesh Generation ==
 
== Mesh Generation ==
* [[Documentation/Nightly/Extensions/CleaverExtension|Cleaver CLI]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CleaverExtension|Cleaver Extension]] extension)</small>
+
* [[Documentation/Nightly/Extensions/CleaverExtension|CleaverCLI]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CleaverExtension|CleaverExtension]] extension)</small>
 +
<span id='Modules_by_category_MeshGeneration'></span>
 
== MeshGeneration ==
 
== MeshGeneration ==
* [[Documentation/Nightly/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
+
* [[Documentation/Nightly/Modules/BodyCentricCubicMesh|BodyCentricCubicMesh]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC_3D_I2MConversion]] extension)</small>
* [[Documentation/Nightly/Modules/MeshCompression|Mesh Compression]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
+
<span id='Modules_by_category_Microscopy'></span>
 
== Microscopy ==
 
== Microscopy ==
* [[Documentation/Nightly/Extensions/IASEM|Bin Shrink]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
+
* [[Documentation/Nightly/Extensions/IASEM|IASEMImportSeries]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
* [[Documentation/Nightly/Extensions/IASEM|Label Object Statistics]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
 
 
* [[Documentation/Nightly/Extensions/IASEM|IASEMImport]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/Nightly/Extensions/IASEM|IASEMImport]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
* [[Documentation/Nightly/Extensions/IASEM|IASEMImport Series]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
+
* [[Documentation/Nightly/Extensions/IASEM|BinShrink]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
* [[Documentation/Nightly/Extensions/IASEM|Spacing Aware Curvature Diffusion]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
+
* [[Documentation/Nightly/Extensions/IASEM|LabelObjectStatistics]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
== Multidimensional data ==
+
* [[Documentation/Nightly/Extensions/IASEM|SpacingAwareCurvatureDiffusion]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
* [[Documentation/Nightly/Extensions/MultidimData|Metafile Importer]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small>
+
<span id='Modules_by_category_MultiVolume_Support'></span>
* [[Documentation/Nightly/Extensions/MultidimData|Sequence Browser]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/Nightly/Extensions/MultidimData|Sequences]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small>
 
 
== MultiVolume Support ==
 
== MultiVolume Support ==
* [[Documentation/Nightly/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
+
* [[Documentation/Nightly/Modules/MultiVolumeImporter|MultiVolumeImporter]]    <small>(scripted, built-in)</small>
* [[Documentation/Nightly/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
+
* [[Documentation/Nightly/Modules/MultiVolumeExplorer|MultiVolumeExplorer]]    <small>(loadable, built-in)</small>
 +
<span id='Modules_by_category_Pathology'></span>
 +
== Pathology ==
 +
* [[Documentation/Nightly/Extensions/SlicerPathology|SlicerPathology]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerPathology|SlicerPathology]] extension)</small>
 +
<span id='Modules_by_category_Perk_Tutor'></span>
 
== Perk Tutor ==
 
== Perk Tutor ==
* [[Documentation/Nightly/Extensions/PerkTutor|Python Metrics Calculator]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small>
+
* [[Documentation/Nightly/Extensions/PerkTutor|PythonMetricsCalculator]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PerkTutor|PerkTutor]] extension)</small>
* [[Documentation/Nightly/Modules/WorkflowSegmentation|Workflow Segmentation]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small>
+
* [[Documentation/Nightly/Modules/TransformRecorder|TransformRecorder]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|PerkTutor]] extension)</small>
* [[Documentation/Nightly/Modules/TransformRecorder|Transform Recorder]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small>
+
* [[Documentation/Nightly/Modules/PerkEvaluator|PerkEvaluator]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|PerkTutor]] extension)</small>
* [[Documentation/Nightly/Modules/PerkEvaluator|Perk Evaluator]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small>
+
* [[Documentation/Nightly/Modules/WorkflowSegmentation|WorkflowSegmentation]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|PerkTutor]] extension)</small>
 +
<span id='Modules_by_category_Plastimatch'></span>
 
== Plastimatch ==
 
== Plastimatch ==
* [[Documentation/Nightly/Modules/DicomSroExport|Dicom Sro Export]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
+
* [[Documentation/Nightly/Modules/DicomSroExport|DicomSroExport]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
* [[Documentation/Nightly/Extensions/SlicerRT|Plm Register]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
+
* [[Documentation/Nightly/Extensions/SlicerRT|PlmRegister]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
 +
<span id='Modules_by_category_Plastimatch_Registration'></span>
 
=== Registration ===
 
=== Registration ===
* [[Documentation/Nightly/Extensions/SlicerRT|plastimatch slicer bspline]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
+
* [[Documentation/Nightly/Extensions/SlicerRT|plastimatch_slicer_bspline]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
* [[Documentation/Nightly/Extensions/SlicerRT|plastimatch slicer landwarp]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
+
* [[Documentation/Nightly/Extensions/SlicerRT|plastimatch_slicer_landwarp]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
* [[Documentation/Nightly/Extensions/SlicerRT|plastimatch slicer xformwarp]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
+
<span id='Modules_by_category_Plastimatch_Utilities'></span>
 
=== Utilities ===
 
=== Utilities ===
* [[Documentation/Nightly/Extensions/SlicerRT|plastimatch slicer dicomrt export]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
+
* [[Documentation/Nightly/Extensions/SlicerRT|PlastimatchPy]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
* [[Documentation/Nightly/Extensions/SlicerRT|plastimatch slicer dicomrt import]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
+
<span id='Modules_by_category_Quantification'></span>
* [[Documentation/Nightly/Extensions/SlicerRT|Plastimatch Py]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
 
== Quantification ==
 
== Quantification ==
* [[Documentation/Nightly/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]]    <small>(cli, built-in)</small>
+
* [http://slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/DSC_MRI_Analysis DSCMRIAnalysis]    <small>(cli, bundled in [http://slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/DSC_MRI_Analysis DSCMRIAnalysis] extension)</small>
* [[Documentation/Nightly/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
+
* [[Documentation/Nightly/Modules/PETLiverUptakeMeasurement|PETLiverUptakeMeasurement]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PETLiverUptakeMeasurement|PETLiverUptakeMeasurement]] extension)</small>
* [[Documentation/Nightly/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis]] extension)</small>
+
* [[Documentation/Nightly/Extensions/PET-IndiC|PETIndiC]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PET-IndiC|PET-IndiC]] extension)</small>
* [[Documentation/Nightly/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PkModeling|Pk Modeling]] extension)</small>
+
* [[Documentation/Nightly/Modules/Q3DC|Q3DC]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/Q3DC|Q3DC]] extension)</small>
* [[Documentation/Nightly/Modules/HeterogeneityCAD|Heterogeneity CAD]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] extension)</small>
+
* [[Documentation/Nightly/Modules/HeterogeneityCAD|HeterogeneityCAD]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|OpenCAD]] extension)</small>
* [[Documentation/Nightly/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
+
* [[Documentation/Nightly/Modules/ShapeQuantifier|ShapeQuantifier]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ShapeQuantifier|ShapeQuantifier]] extension)</small>
* [[Documentation/Nightly/Modules/DiceComputation|Dice Computation]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/DiceComputation|Dice Computation]] extension)</small>
+
* [[Documentation/Nightly/Modules/QuantitativeIndicesCLI|QuantitativeIndicesCLI]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PET-IndiC|PET-IndiC]] extension)</small>
* [[Documentation/Nightly/Modules/DataProbe|Data Probe]]    <small>(scripted, built-in)</small>
+
* [[Documentation/Nightly/Modules/PETStandardUptakeValueComputation|PETStandardUptakeValueComputation]]    <small>(cli, built-in)</small>
 +
* [[Documentation/Nightly/Modules/SUVFactorCalculator|SUVFactorCalculator]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PETDICOM|PETDICOMExtension]] extension)</small>
 +
* [[Documentation/Nightly/Modules/SpinalCurvatureMeasurement|SpinalCurvatureMeasurement]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis]] extension)</small>
 +
* [[Documentation/Nightly/Modules/QuantitativeIndicesTool|QuantitativeIndicesTool]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PET-IndiC|PET-IndiC]] extension)</small>
 +
* SegmentStatistics    <small>(scripted, built-in)</small>
 +
* [[Documentation/Nightly/Modules/LabelStatistics|LabelStatistics]]    <small>(scripted, built-in)</small>
 +
* [[Documentation/Nightly/Modules/MeshStatistics|MeshStatistics]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/MeshStatistics|MeshStatisticsExtension]] extension)</small>
 +
* [[Documentation/Nightly/Modules/DWModeling|DWModeling]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerProstate|SlicerProstate]] extension)</small>
 +
* BRAINSLabelStats    <small>(cli, built-in)</small>
 +
* [[Documentation/Nightly/Modules/PkModeling|PkModeling]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PkModeling|PkModeling]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/LongitudinalPETCT|PETSUVImageMaker]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|LongitudinalPETCT]] extension)</small>
 +
* [[Documentation/Nightly/Modules/DataProbe|DataProbe]]    <small>(scripted, built-in)</small>
 +
* [[Documentation/Nightly/Extensions/ModelToModelDistance|ModelToModelDistance]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/ModelToModelDistance|ModelToModelDistance]] extension)</small>
 +
* [[Documentation/Nightly/Modules/T1Mapping|T1Mapping]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/T1Mapping|T1Mapping]] extension)</small>
 +
* [[Documentation/Nightly/Modules/SlicerAstroDataProbe|SlicerAstroDataProbe]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerAstro|SlicerAstro]] extension)</small>
 +
* [[Documentation/Nightly/Modules/AnglePlanes|AnglePlanes]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ShapeQuantifier|ShapeQuantifier]] extension)</small>
 +
* [[Documentation/Nightly/Modules/dPetBrainQuantification|dPetBrainQuantification]]    <small>(scripted, bundled in [http://gti-fing.github.io/SlicerPetSpectAnalysis PetSpectAnalysis] extension)</small>
 +
* [[Documentation/Nightly/Modules/PickAndPaint|PickAndPaint]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PickAndPaint|PickAndPaintExtension]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/QuantitativeReporting|QuantitativeReporting]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/QuantitativeReporting|QuantitativeReporting]] extension)</small>
 +
* [[Documentation/Nightly/Modules/DiceComputation|DiceComputation]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/DiceComputation|DiceComputation]] extension)</small>
 +
<span id='Modules_by_category_Quantification_ChangeQuantification'></span>
 
=== ChangeQuantification ===
 
=== ChangeQuantification ===
* [[Documentation/Nightly/Modules/IntensityDifferenceMetric|Intensity Difference Metric]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] extension)</small>
+
* [[Documentation/Nightly/Modules/IntensityDifferenceMetric|IntensityDifferenceMetric]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/ChangeTracker|ChangeTracker]] extension)</small>
 +
<span id='Modules_by_category_Radiology'></span>
 +
 
 +
== Radiology ==
 +
* [[Documentation/Nightly/Extensions/SliceTracker|SliceTracker]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SliceTracker|SliceTracker]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/SliceTracker|SliceTrackerRegistration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SliceTracker|SliceTracker]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/SliceTracker|SliceTrackerZFrameRegistration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SliceTracker|SliceTracker]] extension)</small>
 +
<span id='Modules_by_category_Radiotherapy'></span>
 
== Radiotherapy ==
 
== Radiotherapy ==
* [[Documentation/Nightly/Modules/ContourComparison|Contour Comparison]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
+
* [[Documentation/Nightly/Extensions/SlicerRT|Beams]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
* [[Documentation/Nightly/Extensions/SlicerRT|Beams]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
+
* [[Documentation/Nightly/Extensions/SlicerRT|DvhComparison]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
* [[Documentation/Nightly/Extensions/SlicerRT|Dvh Comparison]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
+
* [[Documentation/Nightly/Modules/DoseVolumeHistogram|DoseVolumeHistogram]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
* [[Documentation/Nightly/Modules/Isodose|Isodose]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
+
* [[Documentation/Nightly/Extensions/SlicerRT|DicomRtImportExport]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
* [[Documentation/Nightly/Extensions/SlicerRT|Dicom Rt Import Export]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
+
* [[Documentation/Nightly/Modules/DoseAccumulation|DoseAccumulation]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
* [[Documentation/Nightly/Modules/Contours|Contours]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
+
* [[Documentation/Nightly/Extensions/SlicerRT|ExternalBeamPlanning]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
* [[Documentation/Nightly/Modules/DoseAccumulation|Dose Accumulation]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
+
* [[Documentation/Nightly/Modules/SegmentComparison|SegmentComparison]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
* [[Documentation/Nightly/Modules/DoseComparison|Dose Comparison]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
+
* [[Documentation/Nightly/Extensions/SlicerRT|PlanarImage]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
* [[Documentation/Nightly/Modules/ContourMorphology|Contour Morphology]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
+
* [[Documentation/Nightly/Modules/Isodose|Isodose]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
* [[Documentation/Nightly/Modules/DicomSroImport|Dicom Sro Import]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
+
* [[Documentation/Nightly/Modules/DoseComparison|DoseComparison]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
* [[Documentation/Nightly/Modules/DoseVolumeHistogram|Dose Volume Histogram]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
+
* [[Documentation/Nightly/Modules/SegmentMorphology|SegmentMorphology]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
* [[Documentation/Nightly/Extensions/SlicerRT|Planar Image]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
+
* [[Documentation/Nightly/Modules/DicomSroImport|DicomSroImport]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
 +
<span id='Modules_by_category_Registration'></span>
 
== Registration ==
 
== Registration ==
* [[Documentation/Nightly/Modules/BRAINSResample|BRAINSResample]]    <small>(cli, built-in)</small>
 
 
* [[Documentation/Nightly/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
* BRAINSResize    <small>(cli, built-in)</small>
 
* BRAINSResize    <small>(cli, built-in)</small>
* Perform Metric Test   <small>(cli, built-in)</small>
+
* PerformMetricTest    <small>(cli, built-in)</small>
 +
* [[Documentation/Nightly/Modules/LandmarkRegistration|LandmarkRegistration]]    <small>(scripted, built-in)</small>
 +
* [[Documentation/Nightly/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] extension)</small>
 +
* [[Documentation/Nightly/Modules/BRAINSResample|BRAINSResample]]   <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/BRAINSFit|BRAINSFit]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/BRAINSFit|BRAINSFit]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] extension)</small>
+
<span id='Modules_by_category_Registration_CMF_Registration'></span>
 +
=== CMF Registration ===
 +
* [[Documentation/Nightly/Extensions/CMFreg|ApplyMatrix]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 +
* [[Documentation/Nightly/Modules/LabelExtraction|LabelExtraction]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 +
* [[Documentation/Nightly/Modules/LabelAddition|LabelAddition]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 +
* [[Documentation/Nightly/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 +
* [[Documentation/Nightly/Modules/SurfaceRegistration|SurfaceRegistration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 +
<span id='Modules_by_category_CMF_Registration_Voxelbase_Registration'></span>
 +
==== Voxelbase Registration ====
 +
* [[Documentation/Nightly/Modules/NonGrowing|NonGrowing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 +
* [[Documentation/Nightly/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 +
* [[Documentation/Nightly/Modules/MaskCreation|MaskCreation]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 +
<span id='Modules_by_category_Registration_Label_Registration'></span>
 +
=== Label Registration ===
 +
* [[Documentation/Nightly/Modules/DistanceMapBasedRegistration|DistanceMapBasedRegistration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerProstate|SlicerProstate]] extension)</small>
 +
<span id='Modules_by_category_Registration_Specialized'></span>
 
=== Specialized ===
 
=== Specialized ===
 
* [[Documentation/Nightly/Modules/ACPCTransform|ACPCTransform]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ACPCTransform|ACPCTransform]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/FiducialRegistration|Fiducial Registration]]   <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/FiducialRegistration|FiducialRegistration]]    <small>(cli, built-in)</small>
* VBRAINSDemon Warp   <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/BRAINSDemonWarp|BRAINSDemonWarp]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/BRAINSDemonWarp|BRAINSDemon Warp]]    <small>(cli, built-in)</small>
 
 
* [[Documentation/Nightly/Modules/Reformat|Reformat]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/Reformat|Reformat]]    <small>(loadable, built-in)</small>
 +
* [[Documentation/Nightly/Extensions/ScatteredTransform|ScatteredTransform]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/ScatteredTransform|ScatteredTransform]] extension)</small>
 +
* VBRAINSDemonWarp    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Segmentation'></span>
 
== Segmentation ==
 
== Segmentation ==
* [[Documentation/Nightly/Modules/AirwaySegmentation|Airway Segmentation]]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation] extension)</small>
+
* [[Documentation/Nightly/Modules/ROBEXBrainExtraction|ROBEXBrainExtraction]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/ROBEXBrainExtraction|ROBEXBrainExtraction]] extension)</small>
* [[Documentation/Nightly/Extensions/MABMIS|IGR3D MABMIS Training]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] extension)</small>
+
* EMSegmentQuick    <small>(loadable, built-in)</small>
 +
* [[Documentation/Nightly/Extensions/VolumeClip|VolumeClipWithModel]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/VolumeClip|VolumeClip]] extension)</small>
 
* [http://www.nitrc.org/projects/abc ABC]    <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small>
 
* [http://www.nitrc.org/projects/abc ABC]    <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small>
* EMSegment Quick   <small>(loadable, built-in)</small>
+
* [[Documentation/Nightly/Extensions/SliceTracker|VolumeClipToLabel]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SliceTracker|SliceTracker]] extension)</small>
* [[Documentation/Nightly/Modules/SimpleRegionGrowingSegmentation|Simple Region Growing Segmentation]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Extensions/AirwaySegmentation|AirwaySegmentationCLI]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/AirwaySegmentation|AirwaySegmentation]] extension)</small>
* [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small>
+
* [[Documentation/Nightly/Modules/LAScarSegmenter|LAScarSegmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScarSegmenter]] extension)</small>
 +
* [[Documentation/Nightly/Modules/SegmentEditor|SegmentEditor]]   <small>(scripted, built-in)</small>
 +
* [[Documentation/Nightly/Modules/AirwaySegmentation|AirwaySegmentation]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/AirwaySegmentation|AirwaySegmentation]] extension)</small>
 +
* [[Documentation/Nightly/Modules/SkullStripper|SkullStripper]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SkullStripper|SkullStripper]] extension)</small>
 +
* [https://github.com/lassoan/SlicerSegmentEditorExtraEffects SegmentEditorFastMarching]    <small>(scripted, bundled in [https://github.com/lassoan/SlicerSegmentEditorExtraEffects SegmentEditorExtraEffects] extension)</small>
 +
* [[Documentation/Nightly/Modules/SobolevSegmenter|SobolevSegmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SobolevSegmenter|SobolevSegmenter]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/VolumeClip|VolumeClipWithRoi]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/VolumeClip|VolumeClip]] extension)</small>
 +
* [[Documentation/Nightly/Modules/SegmentCAD|SegmentCAD]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|OpenCAD]] extension)</small>
 +
* [[Documentation/Nightly/Modules/SwissSkullStripper|SwissSkullStripper]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SwissSkullStripper|SwissSkullStripper]] extension)</small>
 +
* [https://github.com/lassoan/SlicerSegmentEditorExtraEffects SegmentEditorFloodFilling]    <small>(scripted, bundled in [https://github.com/lassoan/SlicerSegmentEditorExtraEffects SegmentEditorExtraEffects] extension)</small>
 +
* [https://github.com/Tomnl/Slicer-Wasp Wasp]    <small>(scripted, bundled in [https://github.com/Tomnl/Slicer-Wasp Wasp] extension)</small>
 +
* [[Documentation/Nightly/Modules/Editor|Editor]]    <small>(scripted, built-in)</small>
 +
* [[Documentation/Nightly/Modules/SimpleRegionGrowingSegmentation|SimpleRegionGrowingSegmentation]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/EMSegment|EMSegment]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/EMSegment|EMSegment]]    <small>(loadable, built-in)</small>
* [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip With Roi]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip]] extension)</small>
+
* [[Documentation/Nightly/Extensions/QuantitativeReporting|QuantitativeReporting]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/QuantitativeReporting|QuantitativeReporting]] extension)</small>
* [[Documentation/Nightly/Modules/SegmentCAD|Segment CAD]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] extension)</small>
+
* [[Documentation/Nightly/Extensions/IntensitySegmenter|IntensitySegmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IntensitySegmenter|IntensitySegmenter]] extension)</small>
* [[Documentation/Nightly/Extensions/AirwaySegmentation|Airway Segmentation CLI]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/AirwaySegmentation|Airway Segmentation]] extension)</small>
+
* [https://github.com/lassoan/SlicerSegmentEditorExtraEffects SegmentEditorWatershed]    <small>(scripted, bundled in [https://github.com/lassoan/SlicerSegmentEditorExtraEffects SegmentEditorExtraEffects] extension)</small>
* [[Documentation/Nightly/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
+
<span id='Modules_by_category_Segmentation_Specialized'></span>
* [[Documentation/Nightly/Modules/SobolevSegmenter|Sobolev Segmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SobolevSegmenter|Sobolev Segmenter]] extension)</small>
 
* [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip With Model]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip]] extension)</small>
 
* [[Documentation/Nightly/Extensions/MABMIS|IGR3D MABMIS Testing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] extension)</small>
 
* [[Documentation/Nightly/Modules/SwissSkullStripper|Swiss Skull Stripper]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]] extension)</small>
 
 
=== Specialized ===
 
=== Specialized ===
* EMSegment Command Line    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli, built-in)</small>
 
 
* BRAINSROIAuto    <small>(cli, built-in)</small>
 
* BRAINSROIAuto    <small>(cli, built-in)</small>
== Shape Analysis ==
+
* [[Documentation/Nightly/Modules/RobustStatisticsSegmenter|RobustStatisticsSegmenter]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]] extension)</small>
+
* EMSegmentCommandLine    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Sequences'></span>
 +
== Sequences ==
 +
* [[Documentation/Nightly/Extensions/Sequences|Sequences]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/Sequences|Sequences]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/Sequences|SequenceBrowser]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/Sequences|Sequences]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/Sequences|MetafileImporter]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/Sequences|Sequences]] extension)</small>
 +
<span id='Modules_by_category_Slicelets'></span>
 
== Slicelets ==
 
== Slicelets ==
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
+
* [[Documentation/Nightly/Modules/FilmDosimetry|FilmDosimetryAnalysis]]    <small>(scripted, bundled in [[Documentation/Nightly/Modules/FilmDosimetry|FilmDosimetryAnalysis]] extension)</small>
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo]    <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
+
* [[Documentation/Nightly/Modules/GelDosimetry|GelDosimetryAnalysis]]    <small>(scripted, bundled in [[Documentation/Nightly/Modules/GelDosimetry|GelDosimetryAnalysis]] extension)</small>
 +
* [[Documentation/Nightly/Modules/GelDosimetry|GelDosimetryAnalysisAlgo]]    <small>(loadable, bundled in [[Documentation/Nightly/Modules/GelDosimetry|GelDosimetryAnalysis]] extension)</small>
 +
<span id='Modules_by_category_SlicerProstate'></span>
 +
== SlicerProstate ==
 +
* [[Documentation/Nightly/Extensions/SliceTracker|ZFrameCalibration]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SliceTracker|SliceTracker]] extension)</small>
 +
<span id='Modules_by_category_Surface_Models'></span>
 
== Surface Models ==
 
== Surface Models ==
* [[Documentation/Nightly/Modules/ModelToLabelMap|Model To Label Map]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/SurfaceToolbox|SurfaceToolbox]]    <small>(scripted, built-in)</small>
* [[Documentation/Nightly/Modules/MergeModels|Merge Models]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/GrayscaleModelMaker|GrayscaleModelMaker]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/SurfaceToolbox|Surface Toolbox]]    <small>(scripted, built-in)</small>
+
* [[Documentation/Nightly/Modules/ModelMaker|ModelMaker]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/ProbeVolumeWithModel|Probe Volume With Model]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/ModelToLabelMap|ModelToLabelMap]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/GrayscaleModelMaker|Grayscale Model Maker]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/MergeModels|MergeModels]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/LabelMapSmoothing|Label Map Smoothing]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/EasyClip|EasyClip]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/EasyClip|EasyClip]] extension)</small>
* [[Documentation/Nightly/Modules/ModelMaker|Model Maker]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/LabelMapSmoothing|LabelMapSmoothing]]    <small>(cli, built-in)</small>
 +
* [[Documentation/Nightly/Extensions/MeshToLabelMap|MeshToLabelMap]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/MeshToLabelMap|MeshToLabelMap]] extension)</small>
 +
* [[Documentation/Nightly/Modules/ProbeVolumeWithModel|ProbeVolumeWithModel]]    <small>(cli, built-in)</small>
 +
* [[Documentation/Nightly/Extensions/SlicerIGT|TextureModel]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
 +
<span id='Modules_by_category_TestCases'></span>
 +
== TestCases ==
 +
* SEGExporterSelfTest
 +
<span id='Modules_by_category_Testing'></span>
 
== Testing ==
 
== Testing ==
* Self Tests
+
* CLI4Test
 +
* ThresholdThreadingTest
 +
* [[Documentation/Nightly/Extensions/Scoliosis|ScoliosisMonitoring]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis]] extension)</small>
 +
* SlicerMRBSaveRestoreCheckPathsTest
 
* CLIROITest    <small>(cli, built-in)</small>
 
* CLIROITest    <small>(cli, built-in)</small>
* CLI4Test
+
* PerformanceTests
* Threshold Threading Test
+
* SlicerMRBMultipleSaveRestoreTest
* [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis Monitoring]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis]] extension)</small>
+
* SlicerMRBTest
* Performance Tests
+
* SEGExporterSelfTest
* Slicer MRBTest
+
* SelfTests
 +
* SlicerMRBMultipleSaveRestoreLoopTest
 +
<span id='Modules_by_category_Testing_IGT_Tests'></span>
 
=== IGT Tests ===
 
=== IGT Tests ===
* Breach Warning Self Test
+
* BreachWarningSelfTest
 +
* WatchdogSelfTest
 +
<span id='Modules_by_category_Testing_SlicerRT_Tests'></span>
 
=== SlicerRT Tests ===
 
=== SlicerRT Tests ===
* NAMIC Tutorial 2013June Self Test
+
* IGRTWorkflow_SelfTest
* Dicom Rt Import Self Test
+
* [[Documentation/Nightly/Extensions/SlicerRT|BatchStructureSetConversion]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
* [[Documentation/Nightly/Extensions/SlicerRT|Batch Contour Conversion]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
+
<span id='Modules_by_category_Testing_TestCases'></span>
 
=== TestCases ===
 
=== TestCases ===
* Slice Link Logic    <small>(scripted, built-in)</small>
+
* AtlasTests
* Atlas Tests
+
* AddStorableDataAfterSceneViewTest
* RSNAQuant Tutorial
+
* test_tractography_display
* Volume Rendering Scene Close    <small>(scripted, built-in)</small>
+
* SlicerTransformInteractionTest1
* test tractography display
+
* RSNAQuantTutorial
* slicer Close Crash Bug2590
+
* NeurosurgicalPlanningTutorialMarkupsSelfTest
* Subject Hierarchy Generic Self Test
+
* ChangeTrackerSelfTest
* View Controllers Slice Interpolation Bug1926
+
* FiducialLayoutSwitchBug1914
 +
* GraphCutSegmentSelfTest
 +
* SlicerBoundsTest
 +
* UtilTest
 
* Charting    <small>(scripted, built-in)</small>
 
* Charting    <small>(scripted, built-in)</small>
* Scene Performance    <small>(scripted, built-in)</small>
+
* [http://brainsia.github.io/CardiacAgatstonMeasures/ CardiacAgatstonMeasures]    <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ CardiacAgatstonMeasures] extension)</small>
* Markups In Compare Viewers Self Test
+
* fiber_visibility_crash2438
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures]    <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] extension)</small>
+
* RSNAVisTutorial
* fiber visibility crash2438
 
* scene Import2428
 
* RSNAVis Tutorial
 
 
* JRC2013Vis
 
* JRC2013Vis
* RSNA2012Prostate Demo
+
* AddManyMarkupsFiducialTest
* Add Many Markups Fiducial Test
+
* CropVolumeSelfTest
* Neurosurgical Planning Tutorial Markups Self Test
+
* SliceLinkLogic    <small>(scripted, built-in)</small>
* Colors Scalar Bar Self Test
+
* VolumeRenderingSceneClose    <small>(scripted, built-in)</small>
* Markups In Views Self Test
+
* slicerCloseCrashBug2590
* Subject Hierarchy Core Plugins Self Test
+
* CLIEventTest
* Change Tracker Self Test
+
* [[Documentation/Nightly/Extensions/SlicerDMRI|NsgPlanTracto]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|SlicerDMRI]] extension)</small>
* Fiducial Layout Switch Bug1914
+
* MarkupsWidgetsSelfTest
 +
* TablesSelfTest
 +
* SlicerOrientationSelectorTest
 +
* MarkupsInViewsSelfTest
 +
* TwoCLIsInParallelTest
 +
* SubjectHierarchyCorePluginsSelfTest
 +
* SubjectHierarchyGenericSelfTest
 +
* ScenePerformance    <small>(scripted, built-in)</small>
 +
* MarkupsInCompareViewersSelfTest
 +
* sceneImport2428
 +
* RSNA2012ProstateDemo
 +
* DTINotReproducibleIssue3977
 +
* TwoCLIsInARowTest
 +
* ColorsScalarBarSelfTest
 +
* BRAINSFitRigidRegistrationCrashIssue4139
 
* Slicer4Minute    <small>(scripted, built-in)</small>
 
* Slicer4Minute    <small>(scripted, built-in)</small>
* label Toggle Bug2049
+
* ViewControllersSliceInterpolationBug1926
== Unspecified ==
+
<span id='Modules_by_category_Ultrasound'></span>
* BRAINSDWICleanup   <small>(cli, built-in)</small>
+
== Ultrasound ==
 +
* [https://kitwaremedical.github.io/SlicerITKUltrasoundDoc/ ScanConvertCurvilinearArray]    <small>(cli, bundled in [https://kitwaremedical.github.io/SlicerITKUltrasoundDoc/ SlicerITKUltrasound] extension)</small>
 +
* [https://kitwaremedical.github.io/SlicerITKUltrasoundDoc/ ScanConvertPhasedArray3D]    <small>(cli, bundled in [https://kitwaremedical.github.io/SlicerITKUltrasoundDoc/ SlicerITKUltrasound] extension)</small>
 +
* [https://kitwaremedical.github.io/SlicerITKUltrasoundDoc/ ScanConvertSliceSeries]   <small>(cli, bundled in [https://kitwaremedical.github.io/SlicerITKUltrasoundDoc/ SlicerITKUltrasound] extension)</small>
 +
<span id='Modules_by_category_Uncategorized'></span>
 +
== Uncategorized ==
 +
* [[Documentation/Nightly/Extensions/ShapeQuantifier|ShapeQuantifierCore]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ShapeQuantifier|ShapeQuantifier]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/DatabaseInteractor|DatabaseInteractorLib]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/DatabaseInteractor|DatabaseInteractor]] extension)</small>
 +
<span id='Modules_by_category_Utilities'></span>
 
== Utilities ==
 
== Utilities ==
* [[Documentation/Nightly/Modules/ThingiverseBrowser|Thingiverse Browser]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ThingiverseBrowser|Thingiverse Browser]] extension)</small>
+
* [[Documentation/Nightly/Modules/ScreenCapture|ScreenCapture]]    <small>(scripted, built-in)</small>
* BRAINSStrip Rotation   <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/DataStore|DataStore]]   <small>(loadable, built-in)</small>
* EMSegment Transform To New Format   <small>(cli, built-in)</small>
+
* DICOMPatcher   <small>(scripted, built-in)</small>
* [[Documentation/Nightly/Modules/DataStore|Data Store]]   <small>(loadable, built-in)</small>
+
* BRAINSStripRotation   <small>(cli, built-in)</small>
 +
* EMSegmentTransformToNewFormat   <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Utilities_BRAINS'></span>
 
=== BRAINS ===
 
=== BRAINS ===
* BRAINSTransform Convert   <small>(cli, built-in)</small>
+
* BRAINSTransformConvert   <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Vascular_Modeling_Toolkit'></span>
 
== Vascular Modeling Toolkit ==
 
== Vascular Modeling Toolkit ==
* [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
+
* [http://slicer.vmtk.org/ CenterlineComputation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
* [http://slicer.vmtk.org/ Centerline Computation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
+
* [http://slicer.vmtk.org/ LevelSetSegmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
* [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
+
* [http://slicer.vmtk.org/ VesselnessFiltering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 +
<span id='Modules_by_category_Virtual_Reality'></span>
 +
== Virtual Reality ==
 +
* [[Documentation/Nightly/Modules/VirtualReality|VirtualReality]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerVirtualReality|SlicerVirtualReality]] extension)</small>
 +
<span id='Modules_by_category_Web_System_Tools'></span>
 +
== Web System Tools ==
 +
* [[Documentation/Nightly/Modules/DatabaseInteractor|DatabaseInteractor]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/DatabaseInteractor|DatabaseInteractor]] extension)</small>
 +
<span id='Modules_by_category_Wizards'></span>
 
== Wizards ==
 
== Wizards ==
* [[Documentation/Nightly/Modules/CompareVolumes|Compare Volumes]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
+
* [[Documentation/Nightly/Modules/CompareVolumes|CompareVolumes]]    <small>(scripted, built-in)</small>
* [[Documentation/Nightly/Modules/ChangeTracker|Change Tracker]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] extension)</small>
+
* [[Documentation/Nightly/Modules/ChangeTracker|ChangeTracker]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ChangeTracker|ChangeTracker]] extension)</small>
== Work in Progress ==
+
<span id='Modules_by_category_XNATSlicer'></span>
* [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
=== Converters ===
 
* [[Documentation/Nightly/Extensions/Reporting|Label To DICOMSEGConverter]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/Reporting|Reporting]] extension)</small>
 
=== Informatics ===
 
* [[Documentation/Nightly/Extensions/Reporting|Reporting]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/Reporting|Reporting]] extension)</small>
 
==== TestCases ====
 
* Reporting Self Test
 
* Label To DICOMSEGConverter Self Test
 
 
== XNATSlicer ==
 
== XNATSlicer ==
* [[Documentation/Nightly/Extensions/XNATSlicer|Xnat Slicer]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] extension)</small>
+
* [[Documentation/Nightly/Extensions/XNATSlicer|XnatSlicer]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] extension)</small>
= Modules by contributing organization =
+
 
71 contributing organizations:
+
= Modules by name =
* [[#Asclepios_INRIA|Asclepios INRIA]]
+
367 modules:
* [[#AZE_R_D|AZE R&D]]
+
* [http://www.nitrc.org/projects/abc ABC]    <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small>
* [[#Boston_Children_s_Hospital|Boston Children's Hospital]]
 
* [[#Brigham_and_Women_s_Hospital|Brigham and Women's Hospital]]
 
* [[#BWH|BWH]]
 
* [[#BWH.2C_SPL|BWH, SPL]]
 
* [[#BWH.2C_SUMS|BWH, SUMS]]
 
* [[#BWH.2FUAB|BWH/UAB]]
 
* [[#CARMA|CARMA]]
 
* [[#College_of_Information_Engineering.2C_Zhejiang_University_of_Technology.2C_Hangzhou.2C_China.29.3B_Xiaolei_Chen.2C_Jiashu_Zhang.28Department_of_Neurosurgery.2C_PLA_General_Hospital.2C_Beijing.2C_China|College of Information Engineering, Zhejiang University of Technology, Hangzhou, China);  Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China]]
 
* [[#CRTC|CRTC]]
 
* [[#gatech|gatech]]
 
* [[#GE|GE]]
 
* [[#Georgia_Tech|Georgia Tech]]
 
* [[#IBM|IBM]]
 
* [[#Isomics|Isomics]]
 
* [[#Isomics_Inc.|Isomics Inc.]]
 
* [[#Isomics.2C_pieper.40isomics.com|Isomics, pieper@isomics.com]]
 
* [[#Kingston_General_Hospital|Kingston General Hospital]]
 
* [[#Kitware|Kitware]]
 
* [[#Kitware.29|Kitware)]]
 
* [[#MGH|MGH]]
 
* [[#Moka_Creative.2C_LLC.2C_kumar.sunil.p.40gmail.com|Moka Creative, LLC, kumar.sunil.p@gmail.com]]
 
* [[#MSC.2FNLM|MSC/NLM]]
 
* [[#Noware|Noware]]
 
* [[#Orobix|Orobix]]
 
* [[#PerkLab_at_Queen_s_University|Perk Lab at Queen's University]]
 
* [[#PerkLab.2C_Queen_s|Perk Lab, Queen's]]
 
* [[#PerkLab.2C_Queen_s_University|Perk Lab, Queen's University]]
 
* [[#PMH|PMH]]
 
* [[#PMH.2C_Toronto|PMH, Toronto]]
 
* [[#Princess_Margaret_Cancer_Centre|Princess Margaret Cancer Centre]]
 
* [[#Queen_s|Queen's]]
 
* [[#Queen_s_Universit|Queen's Universit]]
 
* [[#Queen_s_University|Queen's University]]
 
* [[#Queen_s_University.29_Jaime_Garcia-Guevara_.28Queen_s_University|Queen's University) Jaime Garcia-Guevara (Queen's University]]
 
* [[#Radiation_Medicine_Program.2C_Princess_Margaret_Hospital.2C_University_Health_Network_Toronto|Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto]]
 
* [[#RMP.2C_PMH|RMP, PMH]]
 
* [[#SAIC-Frederick.2C_NCI-Frederick|SAIC-Frederick, NCI-Frederick]]
 
* [[#SBU|SBU]]
 
* [[#SCI_Institute|SCI Institute]]
 
* [[#Shiga_University_of_Medical_Science|Shiga University of Medical Science]]
 
* [[#Shiga_University_of_Medical_Science_in_Japan|Shiga University of Medical Science in Japan]]
 
* [[#Shiga_University_of_Medical_Science.2C_Japan.2C_SPL|Shiga University of Medical Science, Japan, SPL]]
 
* [[#SINAPSE|SINAPSE]]
 
* [[#SNR|SNR]]
 
* [[#SPL|SPL]]
 
* [[#SPL_B_W_Harvard|SPL B&W Harvard]]
 
* [[#SPL.2C_BWH|SPL, BWH]]
 
* [[#SPL.2C_BWH.2C_UPenn|SPL, BWH, UPenn]]
 
* [[#SUMS|SUMS]]
 
* [[#Surgical_Planning_Lab|Surgical Planning Lab]]
 
* [[#UAB|UAB]]
 
* [[#UHN.2C_Toronto|UHN, Toronto]]
 
* [[#Uiowa|Uiowa]]
 
* [[#UIowa|UIowa]]
 
* [[#UNC|UNC]]
 
* [[#Univ_of_Michigan|Univ of Michigan]]
 
* [[#Univ._of_Iowa|Univ. of Iowa]]
 
* [[#University__Magna_Graecia__of_Catanzaro|University 'Magna Graecia' of Catanzaro]]
 
* [[#University_College_Cork|University College Cork]]
 
* [[#University_of_Heidelberg|University of Heidelberg]]
 
* [[#University_of_Iowa|University of Iowa]]
 
* [[#University_of_Iowa.29_and_Andrey_Fedorov_.28SPL|University of Iowa) and Andrey Fedorov (SPL]]
 
* [[#UPenn|UPenn]]
 
* [[#Utah|Utah]]
 
* [[#UVa|UVa]]
 
* [[#UWA|UWA]]
 
* [[#WashU-St._Louis.2C_dmarcus.40wustl.edu|Wash U-St. Louis, dmarcus@wustl.edu]]
 
* [[#while_at_GE|while at GE]]
 
== Asclepios INRIA ==
 
* [[Documentation/Nightly/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] extension)</small>
 
== AZE R&D ==
 
* JRC2013Vis
 
== Boston Children's Hospital ==
 
* [http://slicer.vmtk.org/ Centerline Computation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
== Brigham and Women's Hospital ==
 
* [[Documentation/Nightly/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
* [[Documentation/Nightly/Modules/SurfaceToolbox|Surface Toolbox]]    <small>(scripted, built-in)</small>
 
* test tractography display
 
* [[Documentation/Nightly/Modules/VolumeResliceDriver|Volume Reslice Driver]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
== BWH ==
 
* Add Many Markups Fiducial Test
 
* Change Tracker Self Test
 
* Colors Scalar Bar Self Test
 
* [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]] extension)</small>
 
* [[Documentation/Nightly/Modules/DiceComputation|Dice Computation]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/DiceComputation|Dice Computation]] extension)</small>
 
* [[Documentation/Nightly/Modules/DICOMRWVMPlugin|DICOMRWVMPlugin]]
 
* Fiducial Layout Switch Bug1914
 
* [[Documentation/Nightly/Modules/HeterogeneityCAD|Heterogeneity CAD]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] extension)</small>
 
* [[Documentation/Nightly/Modules/Markups|Markups]]    <small>(loadable, built-in)</small>
 
* Markups In Compare Viewers Self Test
 
* Markups In Views Self Test
 
* Neurosurgical Planning Tutorial Markups Self Test
 
* [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
* [[Documentation/Nightly/Modules/SegmentCAD|Segment CAD]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] extension)</small>
 
* Volume Rendering Scene Close    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small>
 
== BWH, SPL ==
 
* [[Documentation/Nightly/Modules/CropVolume|Crop Volume]]    <small>(loadable, built-in)</small>
 
== BWH, SUMS ==
 
* [[Documentation/Nightly/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
== BWH/UAB ==
 
* [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
== CARMA ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Boolean REMOVEFilter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Connected Threshold Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Isolated Connected Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/Nightly/Modules/LASegmentationWorkflow|LASegmentation Workflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/Nightly/Modules/ScarVisualization|Scar Visualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
== College of Information Engineering, Zhejiang University of Technology, Hangzhou, China);  Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China ==
 
* [[Documentation/Nightly/Modules/GyroGuide|Gyro Guide]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] extension)</small>
 
== CRTC ==
 
* [[Documentation/Nightly/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/Nightly/Modules/MeshCompression|Mesh Compression]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/Nightly/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] extension)</small>
 
== gatech ==
 
* [[Documentation/Nightly/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli, built-in)</small>
 
== GE ==
 
* [[Documentation/Nightly/Modules/AddScalarVolumes|Add Scalar Volumes]]    <small>(cli, built-in)</small>
 
* Charting    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Modules/CheckerBoardFilter|Checker Board Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/CreateDICOMSeries|Create DICOMSeries]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
* Diffusion Tensor Test    <small>(cli, built-in)</small>
 
* DWIConvert    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ExecutionModelTour|Execution Model Tour]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/GrayscaleGrindPeakImageFilter|Grayscale Grind Peak Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/GrayscaleModelMaker|Grayscale Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/HistogramMatching|Histogram Matching]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/LabelMapSmoothing|Label Map Smoothing]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/MedianImageFilter|Median Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ModelMaker|Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ModelToLabelMap|Model To Label Map]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/MultiplyScalarVolumes|Multiply Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/OrientScalarVolume|Orient Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/OtsuThresholdImageFilter|Otsu Threshold Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PkModeling|Pk Modeling]] extension)</small>
 
* [[Documentation/Nightly/Modules/ResampleScalarVolume|Resample Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/SimpleRegionGrowingSegmentation|Simple Region Growing Segmentation]]    <small>(cli, built-in)</small>
 
* Slice Link Logic    <small>(scripted, built-in)</small>
 
* Slicer4Minute    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Extensions/IASEM|Spacing Aware Curvature Diffusion]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/Nightly/Modules/SubtractScalarVolumes|Subtract Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 
* View Controllers Slice Interpolation Bug1926
 
* [[Documentation/Nightly/Modules/VotingBinaryHoleFillingImageFilter|Voting Binary Hole Filling Image Filter]]    <small>(cli, built-in)</small>
 
== Georgia Tech ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
== IBM ==
 
* [[Documentation/Nightly/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 
== Isomics ==
 
* Atlas Tests
 
* [[Documentation/Nightly/Extensions/IASEM|Binary Watershed Effect]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
 
* [http://slicer.vmtk.org/ Centerline Computation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/Nightly/Modules/CompareVolumes|Compare Volumes]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/Data|Data]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/DataProbe|Data Probe]]    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Modules/DICOM|DICOM]]    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Modules/Endoscopy|Endoscopy]]    <small>(scripted, built-in)</small>
 
* fiber visibility crash2438
 
* [[Documentation/Nightly/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]]    <small>(scripted, built-in)</small>
 
* label Toggle Bug2049
 
* [[Documentation/Nightly/Modules/LandmarkRegistration|Landmark Registration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/Nightly/Modules/Models|Models]]    <small>(loadable, built-in)</small>
 
* Performance Tests
 
* [[Documentation/Nightly/Extensions/Reporting|Reporting]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/Reporting|Reporting]] extension)</small>
 
* RSNA2012Prostate Demo
 
* RSNAQuant Tutorial
 
* RSNAVis Tutorial
 
* [[Documentation/Nightly/Modules/SampleData|Sample Data]]    <small>(scripted, built-in)</small>
 
* scene Import2428
 
* Self Tests
 
* [[Documentation/Nightly/Modules/SimpleFilters|Simple Filters]]    <small>(scripted, built-in)</small>
 
* slicer Close Crash Bug2590
 
* [[Documentation/Nightly/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small>
 
* Tractography Interactive Seeding    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/VectorToScalarVolume|Vector To Scalar Volume]]    <small>(scripted, built-in)</small>
 
* [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/Nightly/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/Volumes|Volumes]]    <small>(loadable, built-in)</small>
 
== Isomics Inc. ==
 
* DICOMDiffusion Volume Plugin
 
* DICOMLongitudinal PETCTPlugin
 
* DICOMScalar Volume Plugin
 
* DICOMSlicer Data Bundle Plugin
 
* Slicer MRBTest
 
* Threshold Threading Test
 
== Isomics, pieper@isomics.com ==
 
* [[Documentation/Nightly/Extensions/XNATSlicer|Xnat Slicer]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] extension)</small>
 
== Kingston General Hospital ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
== Kitware ==
 
* [[Documentation/Nightly/Modules/Cameras|Cameras]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/Colors|Colors]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/Data|Data]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/DataStore|Data Store]]    <small>(loadable, built-in)</small>
 
* Double Arrays    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/EventBroker|Event Broker]]
 
* [[Documentation/Nightly/Modules/ExpertAutomatedRegistration|Expert Automated Registration]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ExtensionWizard|Extension Wizard]]    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/FastGrowCut|Fast Grow Cut]]    <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small>
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
* fiber visibility crash2438
 
* [[Documentation/Nightly/Modules/FiducialRegistration|Fiducial Registration]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ImageMaker|Image Maker]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/ImageMaker|Image Maker]] extension)</small>
 
* label Toggle Bug2049
 
* [[Documentation/Nightly/Modules/MatlabCommander|Matlab Commander]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/Nightly/Modules/MatlabModuleGenerator|Matlab Module Generator]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/Nightly/Modules/Models|Models]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Modules/PortPlacement|Port Placement]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]] extension)</small>
 
* [[Documentation/Nightly/Modules/Reformat|Reformat]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/SampleData|Sample Data]]    <small>(scripted, built-in)</small>
 
* Scene Performance    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Modules/SimpleFilters|Simple Filters]]    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small>
 
* [[Documentation/Nightly/Modules/ThresholdScalarVolume|Threshold Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/TractographyDisplay|Tractography Display]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/Units|Units]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/Volumes|Volumes]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/Welcome|Welcome]]    <small>(loadable, built-in)</small>
 
== Kitware) ==
 
* [[Documentation/Nightly/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/Nightly/Modules/FinslerTractography|Finsler Tractography]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
== MGH ==
 
* [[Documentation/Nightly/Modules/DicomSroExport|Dicom Sro Export]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PkModeling|Pk Modeling]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|Plm Register]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== Moka Creative, LLC, kumar.sunil.p@gmail.com ==
 
* [[Documentation/Nightly/Extensions/XNATSlicer|Xnat Slicer]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] extension)</small>
 
== MSC/NLM ==
 
* [[Documentation/Nightly/Extensions/IASEM|Label Object Statistics]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/Nightly/Modules/SimpleFilters|Simple Filters]]    <small>(scripted, built-in)</small>
 
== Noware ==
 
* [[Documentation/Nightly/Modules/SwissSkullStripper|Swiss Skull Stripper]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]] extension)</small>
 
== Orobix ==
 
* [http://slicer.vmtk.org/ Centerline Computation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/Nightly/Modules/SurfaceToolbox|Surface Toolbox]]    <small>(scripted, built-in)</small>
 
* [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
== PerkLab at Queen's University ==
 
* [[Documentation/Nightly/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] extension)</small>
 
== PerkLab, Queen's ==
 
* [[Documentation/Nightly/Extensions/MultidimData|Metafile Importer]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/Nightly/Extensions/MultidimData|Sequence Browser]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/Nightly/Extensions/MultidimData|Sequences]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/Nightly/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
== PerkLab, Queen's University ==
 
* [[Documentation/Nightly/Modules/MatlabCommander|Matlab Commander]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/Nightly/Modules/MatlabModuleGenerator|Matlab Module Generator]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/Nightly/Modules/PlusRemote|Plus Remote]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip With Model]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip]] extension)</small>
 
== PMH ==
 
* Colors Scalar Bar Self Test
 
* [[Documentation/Nightly/Extensions/MultidimData|Sequence Browser]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/Nightly/Extensions/MultidimData|Sequences]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small>
 
== PMH, Toronto ==
 
* [[Documentation/Nightly/Modules/Isodose|Isodose]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== Princess Margaret Cancer Centre ==
 
* [[Documentation/Nightly/Modules/DicomSroExport|Dicom Sro Export]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/DicomSroImport|Dicom Sro Import]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== Queen's ==
 
* [[Documentation/Nightly/Extensions/SlicerRT|Batch Contour Conversion]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|Beams]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/ContourComparison|Contour Comparison]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/ContourMorphology|Contour Morphology]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/Contours|Contours]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/Data|Data]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|Dicom Rt Import Export]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* Dicom Rt Import Self Test
 
* [[Documentation/Nightly/Modules/DoseAccumulation|Dose Accumulation]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/DoseComparison|Dose Comparison]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/DoseVolumeHistogram|Dose Volume Histogram]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo]    <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
* [[Documentation/Nightly/Modules/Isodose|Isodose]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* NAMIC Tutorial 2013June Self Test
 
* [[Documentation/Nightly/Extensions/SlicerRT|Planar Image]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/SubjectHierarchy|Subject Hierarchy]]    <small>(loadable, built-in)</small>
 
* Subject Hierarchy Core Plugins Self Test
 
* Subject Hierarchy Generic Self Test
 
* [[Documentation/Nightly/Extensions/SlicerRT|Vff File Reader]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== Queen's Universit ==
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Fiducials To Model Registration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
== Queen's University ==
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Breach Warning]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Modules/CollectFiducials|Collect Fiducials]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Create Models]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|Dvh Comparison]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Fiducial Registration Wizard]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
* [[Documentation/Nightly/Modules/OpenIGTLinkRemote|Open IGTLink Remote]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Modules/PerkEvaluator|Perk Evaluator]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Pivot Calibration]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/PerkTutor|Python Metrics Calculator]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/Nightly/Modules/ResectionVolume|Resection Volume]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ResectionPlanner|Resection Planner]] extension)</small>
 
* [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis Monitoring]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
* [[Documentation/Nightly/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Transform Fusion]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Modules/TransformRecorder|Transform Recorder]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Ultrasound Snapshots]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip With Roi]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip]] extension)</small>
 
* [[Documentation/Nightly/Modules/VolumeResliceDriver|Volume Reslice Driver]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Modules/WorkflowSegmentation|Workflow Segmentation]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
== Queen's University) Jaime Garcia-Guevara (Queen's University ==
 
* Breach Warning Self Test
 
== Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto ==
 
* [[Documentation/Nightly/Modules/MatlabCommander|Matlab Commander]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/Nightly/Modules/MatlabModuleGenerator|Matlab Module Generator]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
== RMP, PMH ==
 
* Dicom Sro Import Plugin
 
== SAIC-Frederick, NCI-Frederick ==
 
* [[Documentation/Nightly/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
 
== SBU ==
 
* [[Documentation/Nightly/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
== SCI Institute ==
 
* [[Documentation/Nightly/Extensions/CleaverExtension|Cleaver CLI]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CleaverExtension|Cleaver Extension]] extension)</small>
 
== Shiga University of Medical Science ==
 
* [[Documentation/Nightly/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small>
 
== Shiga University of Medical Science in Japan ==
 
* [[Documentation/Nightly/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
== Shiga University of Medical Science, Japan, SPL ==
 
* [[Documentation/Nightly/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small>
 
== SINAPSE ==
 
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures]    <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] extension)</small>
 
== SNR ==
 
* [[Documentation/Nightly/Modules/PathExplorer|Path Explorer]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Modules/TrackerStabilizer|Tracker Stabilizer]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small>
 
== SPL ==
 
* DICOM2Full Brain Tractography    <small>(scripted, built-in)</small>
 
* Label To DICOMSEGConverter Self Test
 
* [[Documentation/Nightly/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small>
 
* [[Documentation/Nightly/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PkModeling|Pk Modeling]] extension)</small>
 
* Reporting Self Test
 
* [[Documentation/Nightly/Modules/TrackerStabilizer|Tracker Stabilizer]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small>
 
== SPL B&W Harvard ==
 
* [[Documentation/Nightly/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] extension)</small>
 
== SPL, BWH ==
 
 
* [[Documentation/Nightly/Modules/ACPCTransform|ACPCTransform]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ACPCTransform|ACPCTransform]]    <small>(cli, built-in)</small>
 +
* [[Documentation/Nightly/Modules/AddScalarVolumes|AddScalarVolumes]]    <small>(cli, built-in)</small>
 +
* [http://www.chestimagingplatform.org AirwayInspector]    <small>(loadable, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [[Documentation/Nightly/Modules/AirwaySegmentation|AirwaySegmentation]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/AirwaySegmentation|AirwaySegmentation]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/AirwaySegmentation|AirwaySegmentationCLI]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/AirwaySegmentation|AirwaySegmentation]] extension)</small>
 +
* [[Documentation/Nightly/Modules/AnglePlanes|AnglePlanes]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ShapeQuantifier|ShapeQuantifier]] extension)</small>
 
* [[Documentation/Nightly/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
* [[Documentation/Nightly/Modules/BSplineToDeformationField|BSpline To Deformation Field]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Extensions/CMFreg|ApplyMatrix]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
* [[Documentation/Nightly/Modules/CastScalarVolume|Cast Scalar Volume]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/AstroMasking|AstroMasking]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerAstro|SlicerAstro]] extension)</small>
* [[Documentation/Nightly/Modules/Colors|Colors]]    <small>(loadable, built-in)</small>
+
* [[Documentation/Nightly/Modules/AstroModeling|AstroModeling]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerAstro|SlicerAstro]] extension)</small>
* [[Documentation/Nightly/Modules/Data|Data]]    <small>(loadable, built-in)</small>
+
* [[Documentation/Nightly/Modules/AstroMomentMaps|AstroMomentMaps]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerAstro|SlicerAstro]] extension)</small>
* [[Documentation/Nightly/Modules/DiffusionTensorScalarMeasurements|Diffusion Tensor Scalar Measurements]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/AstroProfiles|AstroProfiles]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerAstro|SlicerAstro]] extension)</small>
* [[Documentation/Nightly/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/AstroPVDiagram|AstroPVDiagram]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerAstro|SlicerAstro]] extension)</small>
* DTIexport    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/AstroPVSlice|AstroPVSlice]]   <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerAstro|SlicerAstro]] extension)</small>
* DTIimport   <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/AstroReproject|AstroReproject]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerAstro|SlicerAstro]] extension)</small>
* [[Documentation/Nightly/Modules/DWIToDTIEstimation|DWITo DTIEstimation]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Extensions/SlicerAstro|AstroSampleData]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerAstro|SlicerAstro]] extension)</small>
* Fiber Tract Measurements    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/AstroSmoothing|AstroSmoothing]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerAstro|SlicerAstro]] extension)</small>
* [[Documentation/Nightly/Modules/FiducialRegistration|Fiducial Registration]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/AstroStatistics|AstroStatistics]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerAstro|SlicerAstro]] extension)</small>
* [[Documentation/Nightly/Modules/GrayscaleModelMaker|Grayscale Model Maker]]   <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/AstroVolume|AstroVolume]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerAstro|SlicerAstro]] extension)</small>
* [[Documentation/Nightly/Modules/ImageLabelCombine|Image Label Combine]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Extensions/SlicerAstro|AstroWelcome]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerAstro|SlicerAstro]] extension)</small>
* [[Documentation/Nightly/Modules/MaskScalarVolume|Mask Scalar Volume]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Extensions/SlicerRT|Beams]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
* [[Documentation/Nightly/Modules/MergeModels|Merge Models]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Extensions/IASEM|BinShrink]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
* [[Documentation/Nightly/Modules/ModelMaker|Model Maker]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Extensions/OpenCVExample|BlendVectorVolumes]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/OpenCVExample|OpenCVExample]] extension)</small>
* [[Documentation/Nightly/Modules/Models|Models]]    <small>(loadable, built-in)</small>
+
* [[Documentation/Nightly/Modules/BodyCentricCubicMesh|BodyCentricCubicMesh]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC_3D_I2MConversion]] extension)</small>
* [[Documentation/Nightly/Modules/ModelToLabelMap|Model To Label Map]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/BRAINSDemonWarp|BRAINSDemonWarp]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/MultiVolumeExplorer|Multi Volume Explorer]]   <small>(loadable, built-in)</small>
+
* BRAINSDWICleanup   <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/Nightly/Modules/ProbeVolumeWithModel|Probe Volume With Model]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Extensions/Reporting|Reporting]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/Reporting|Reporting]] extension)</small>
 
* [[Documentation/Nightly/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/SceneViews|Scene Views]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
* [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]] extension)</small>
 
* Test Grid Transform Registration    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ThresholdScalarVolume|Threshold Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/Volumes|Volumes]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/Welcome|Welcome]]    <small>(loadable, built-in)</small>
 
== SPL, BWH, UPenn ==
 
* [[Documentation/Nightly/Modules/MergeModels|Merge Models]]    <small>(cli, built-in)</small>
 
== SUMS ==
 
* [[Documentation/Nightly/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
== Surgical Planning Lab ==
 
* [[Documentation/Nightly/Extensions/Reporting|Label To DICOMSEGConverter]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/Reporting|Reporting]] extension)</small>
 
== UAB ==
 
* [[Documentation/Nightly/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
* [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
* [[Documentation/Nightly/Modules/SobolevSegmenter|Sobolev Segmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SobolevSegmenter|Sobolev Segmenter]] extension)</small>
 
== UHN, Toronto ==
 
* [[Documentation/Nightly/Modules/ContourComparison|Contour Comparison]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/ContourMorphology|Contour Morphology]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/Contours|Contours]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|Dicom Rt Import Export]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/DoseAccumulation|Dose Accumulation]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/DoseComparison|Dose Comparison]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/DoseVolumeHistogram|Dose Volume Histogram]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== Uiowa ==
 
* DWIConvert    <small>(cli, built-in)</small>
 
== UIowa ==
 
* DWIConvert    <small>(cli, built-in)</small>
 
== UNC ==
 
* [[Documentation/Nightly/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small>
 
* [[Documentation/Nightly/Modules/PortPlacement|Port Placement]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]] extension)</small>
 
* [[Documentation/Nightly/Modules/ResampleDTIVolume|Resample DTIVolume]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ResampleScalarVectorDWIVolume|Resample Scalar Vector DWIVolume]]    <small>(cli, built-in)</small>
 
== Univ of Michigan ==
 
* [[Documentation/Nightly/Extensions/CMFreg|Surface Registration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
== Univ. of Iowa ==
 
* [[Documentation/Nightly/Modules/DICOMPETSUVPlugin|DICOMPETSUVPlugin]]
 
* [[Documentation/Nightly/Modules/DICOMRWVMPlugin|DICOMRWVMPlugin]]
 
== University 'Magna Graecia' of Catanzaro ==
 
* [[Documentation/Nightly/Extensions/SlicerRT|Plastimatch Py]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== University College Cork ==
 
* [[Documentation/Nightly/Modules/AirwaySegmentation|Airway Segmentation]]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation] extension)</small>
 
* [[Documentation/Nightly/Extensions/AirwaySegmentation|Airway Segmentation CLI]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/AirwaySegmentation|Airway Segmentation]] extension)</small>
 
== University of Heidelberg ==
 
* [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
== University of Iowa ==
 
* [[Documentation/Nightly/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/Nightly/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
== University of Iowa) and Andrey Fedorov (SPL ==
 
* [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
== UPenn ==
 
* [[Documentation/Nightly/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/EMSegment|EMSegment]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/SceneViews|Scene Views]]    <small>(loadable, built-in)</small>
 
== Utah ==
 
* [[Documentation/Nightly/Modules/LabelMapSmoothing|Label Map Smoothing]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
* [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
== UVa ==
 
* [[Documentation/Nightly/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/DWIUnbiasedNonLocalMeansFilter|DWIUnbiased Non Local Means Filter]]    <small>(cli, built-in)</small>
 
== UWA ==
 
* [[Documentation/Nightly/Modules/ThingiverseBrowser|Thingiverse Browser]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ThingiverseBrowser|Thingiverse Browser]] extension)</small>
 
== WashU-St. Louis, dmarcus@wustl.edu ==
 
* [[Documentation/Nightly/Extensions/XNATSlicer|Xnat Slicer]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] extension)</small>
 
== while at GE ==
 
* [[Documentation/Nightly/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PkModeling|Pk Modeling]] extension)</small>
 
= Modules by contributing individual =
 
199 contributing individuals:
 
* [[#|']]
 
* [[#.29|)]]
 
* [[#A|A]]
 
* [[#a|a]]
 
* [[#Akila_Viswanathan|Akila Viswanathan]]
 
* [[#Alan_Morris|Alan Morris]]    <small>(Utah)</small>
 
* [[#Alex_Yarmakovich|Alex Yarmakovich]]    <small>(Isomics)</small>
 
* [[#Alex_Yarmarkovich|Alex Yarmarkovich]]    <small>(Kitware))</small>
 
* [[#Ali_Ghayoor|Ali Ghayoor]]
 
* [[#Alireza_Mehrtash|Alireza Mehrtash]]    <small>(SPL and BWH)</small>
 
* [[#Allen_Tannenbaum|Allen Tannenbaum]]    <small>(Stony Brook University)</small>
 
* [[#Amelie_Meyer|Amelie Meyer]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Analysis_Laboratory|Analysis Laboratory]]
 
* [[#Andinet_Enquobahrie|Andinet Enquobahrie]]    <small>(Kitware)</small>
 
* [[#Andras_Lasso|Andras Lasso]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Andreas_Freudling|Andreas Freudling]]    <small>(SPL, BWH)</small>
 
* [[#Andrey_Fedorov|Andrey Fedorov]]    <small>(SPL B&W Harvard)</small>
 
* [[#Andriy_Kot|Andriy Kot]]    <small>(CRTC)</small>
 
* [[#Anonymous|Anonymous]]
 
* [[#Antonio_Damato|Antonio Damato]]
 
* [[#Antonio_Tristan_Vega|Antonio Tristan Vega]]    <small>(UVa)</small>
 
* [[#Anuja_Sharma|Anuja Sharma]]
 
* [[#Arie_Nakhmani|Arie Nakhmani]]    <small>(UAB)</small>
 
* [[#Atsushi_Yamada|Atsushi Yamada]]    <small>(Shiga University of Medical Science)</small>
 
* [[#b|b]]
 
* [[#Beatriz_Paniagua_from_Department_of_Orthodontics|Beatriz Paniagua from Department of Orthodontics]]    <small>(UNC)</small>
 
* [[#Benjamin_Long|Benjamin Long]]    <small>(Kitware)</small>
 
* [[#Benjamin_Yvernault|Benjamin Yvernault]]
 
* [[#Bill_Lorensen|Bill Lorensen]]    <small>(Noware)</small>
 
* [[#Brad_Davis|Brad Davis]]
 
* [[#Bradley_Lowekamp|Bradley Lowekamp]]    <small>(MSC/NLM)</small>
 
* [[#Brian_Zenger|Brian Zenger]]    <small>(CARMA)</small>
 
* [[#BWH|BWH]]
 
* [[#C|C]]
 
* [[#Carl-Fredrik_Westin|Carl-Fredrik Westin]]
 
* [[#Carl-Fredrik_Westin._The_directional_iterators_were_contributed_by_Luis_Ibanez|Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez]]    <small>(Kitware))</small>
 
* [[#Casey_B_Goodlett|Casey B Goodlett]]    <small>(Kitware)</small>
 
* [[#Charles_Marion|Charles Marion]]    <small>(Kitware)</small>
 
* [[#Christian_Baumgartner|Christian Baumgartner]]
 
* [[#Csaba_Pinter|Csaba Pinter]]    <small>(PerkLab, Queen's University)</small>
 
* [[#d|d]]
 
* [[#Dan_Marcus|Dan Marcus]]    <small>(Washington University in St. Louis)</small>
 
* [[#Daniel_Blezek|Daniel Blezek]]    <small>(GE)</small>
 
* [[#Daniel_Haehn|Daniel Haehn]]    <small>(UPenn)</small>
 
* [[#Danny_Perry|Danny Perry]]    <small>(Utah)</small>
 
* [[#Demian_Wassermann|Demian Wassermann]]    <small>(Brigham and Women's Hospital)</small>
 
* [[#Dinggang_Shen|Dinggang Shen]]    <small>(UNC)</small>
 
* [[#Dirk_Padfield|Dirk Padfield]]    <small>(GE)</small>
 
* [[#Dominik_Meier|Dominik Meier]]    <small>(SPL, BWH)</small>
 
* [[#e|e]]
 
* [[#er|er]]    <small>(Kingston General Hospital)</small>
 
* [[#Ethan_Ulrich|Ethan Ulrich]]    <small>(Univ. of Iowa)</small>
 
* [[#Eugene_Kholmovski|Eugene Kholmovski]]    <small>(CARMA)</small>
 
* [[#ez|ez]]    <small>(UVa)</small>
 
* [[#Fotis_Drakopoulos|Fotis Drakopoulos]]    <small>(CRTC)</small>
 
* [[#Francois_Budin|Francois Budin]]    <small>(NIRAL, UNC)</small>
 
* [[#Franklin_King|Franklin King]]    <small>(PerkLab, Queen's University)</small>
 
* [[#g|g]]
 
* [[#Greg_Gardner|Greg Gardner]]    <small>(Utah)</small>
 
* [[#Greg_Harris|Greg Harris]]
 
* [[#Gregory_Sharp|Gregory Sharp]]    <small>(MGH)</small>
 
* [[#Guido_Gerig|Guido Gerig]]    <small>(UNC)</small>
 
* [[#Guillaume_Pernelle|Guillaume Pernelle]]
 
* [[#H|H]]
 
* [[#Hans_J._Johnson|Hans J. Johnson]]
 
* [[#Hans_Johnson|Hans Johnson]]    <small>(SINAPSE)</small>
 
* [[#hans-johnson_-at-_uiowa.edu|hans-johnson -at- uiowa.edu]]
 
* [[#http:.2F.2Fwww.psychiatry.uiowa.edu|http://www.psychiatry.uiowa.edu]]
 
* [[#i|i]]
 
* [[#Ipek_Oguz|Ipek Oguz]]
 
* [[#Ivan_Kolesov|Ivan Kolesov]]    <small>(Stony Brook University)</small>
 
* [[#Jan_Egger|Jan Egger]]
 
* [[#Jayender_Jagadeesan|Jayender Jagadeesan]]    <small>(BWH)</small>
 
* [[#Jean-Baptiste_Berger|Jean-Baptiste Berger]]    <small>(Kitware)</small>
 
* [[#Jean-Christophe_Fillion-Robin|Jean-Christophe Fillion-Robin]]    <small>(Kitware)</small>
 
* [[#Jennifer_Andrea|Jennifer Andrea]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Jessica_Forbes|Jessica Forbes]]    <small>(SINAPSE)</small>
 
* [[#Jim_Miller|Jim Miller]]    <small>(GE)</small>
 
* [[#Johan_Andruejol|Johan Andruejol]]    <small>(Kitware)</small>
 
* [[#John_Evans|John Evans]]    <small>(MGH)</small>
 
* [[#Jonathan_Bronson|Jonathan Bronson]]    <small>(SCI Institute)</small>
 
* [[#Josh_Cates|Josh Cates]]    <small>(Utah)</small>
 
* [[#Joy_Matsui|Joy Matsui]]    <small>(UIowa)</small>
 
* [[#Julien_Finet|Julien Finet]]    <small>(Kitware)</small>
 
* [[#Julien_Jomier|Julien Jomier]]    <small>(Kitware)</small>
 
* [[#Junichi_Tokuda|Junichi Tokuda]]    <small>(BWH)</small>
 
* [[#K|K]]
 
* [[#Kent_Williams|Kent Williams]]    <small>(UIowa)</small>
 
* [[#Kent_WIlliams|Kent WIlliams]]
 
* [[#Kevin_Alex|Kevin Alex]]    <small>(Kingston General Hospital)</small>
 
* [[#Kevin_Wang|Kevin Wang]]    <small>(Princess Margaret Cancer Centre)</small>
 
* [[#Kilian_Pohl|Kilian Pohl]]    <small>(UPenn)</small>
 
* [[#Koichiro_Murakami|Koichiro Murakami]]    <small>(SUMS)</small>
 
* [[#Kyle_Sunderl|Kyle Sunderl]]    <small>(Queen's University)</small>
 
* [[#L|L]]
 
* [[#Lauren_Barber|Lauren Barber]]
 
* [[#Lauren_O_Donnell|Lauren O'Donnell]]    <small>(SPL, BWH)</small>
 
* [[#Laurent_Chauvin|Laurent Chauvin]]    <small>(BWH)</small>
 
* [[#Liang-Jia_Zhu|Liang-Jia Zhu]]    <small>(UAB)</small>
 
* [[#Liangjia_Zhu|Liangjia Zhu]]    <small>(Stony Brook University)</small>
 
* [[#Luca_Antiga|Luca Antiga]]    <small>(Orobix)</small>
 
* [[#Luis_G._Torres|Luis G. Torres]]    <small>(UNC)</small>
 
* [[#Luping_Fang|Luping Fang]]    <small>(College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)</small>
 
* [[#Marc_Niethammer|Marc Niethammer]]    <small>(UNC)</small>
 
* [[#Marcel_Prastawa_prastawa.40sci.utah.edu|Marcel Prastawa prastawa@sci.utah.edu]]
 
* [[#Mark_Scully|Mark Scully]]    <small>(Uiowa)</small>
 
* [[#Markus_Van_Tol|Markus Van Tol]]    <small>(University of Iowa) and Andrey Fedorov (SPL)</small>
 
* [[#Martin_Styner|Martin Styner]]    <small>(UNC)</small>
 
* [[#Mason_Winsauer|Mason Winsauer]]
 
* [[#Matt_Lougheed|Matt Lougheed]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Mattea_Welch|Mattea Welch]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Matthew_Holden|Matthew Holden]]    <small>(Queen's University)</small>
 
* [[#Matthew_S._Holden|Matthew S. Holden]]    <small>(Queen's University)</small>
 
* [[#Matthew_Woehlke|Matthew Woehlke]]    <small>(Kitware)</small>
 
* [[#Michael_Jeulin-Lagarrigue|Michael Jeulin-Lagarrigue]]    <small>(Kitware)</small>
 
* [[#Minjeong_Kim|Minjeong Kim]]    <small>(UNC)</small>
 
* [[#n|n]]
 
* [[#N|N]]
 
* [[#Nabgha_Fahrat|Nabgha Fahrat]]
 
* [[#Neuro_Image_Resarch|Neuro Image Resarch]]
 
* [[#Nicholas_Herlambang|Nicholas Herlambang]]    <small>(AZE R&D)</small>
 
* [[#Nick_Tustison|Nick Tustison]]    <small>(UPenn)</small>
 
* [[#Nicole_Aucoin|Nicole Aucoin]]    <small>(BWH)</small>
 
* [[#Nigel_Goh|Nigel Goh]]    <small>(UWA)</small>
 
* [[#Nikos_Chrisochoides|Nikos Chrisochoides]]    <small>(CRTC)</small>
 
* [[#o|o]]
 
* [[#Olivier_Clatz|Olivier Clatz]]    <small>(Asclepios INRIA) and Nikos Chrisochoides (CRTC)</small>
 
* [[#P|P]]
 
* [[#Paolo_Zaffino|Paolo Zaffino]]    <small>(University 'Magna Graecia' of Catanzaro)</small>
 
* [[#Pat_Marion|Pat Marion]]    <small>(Kitware)</small>
 
* [[#Paul_Mercea|Paul Mercea]]    <small>(University of Heidelberg)</small>
 
* [[#Pengdong_Xiao|Pengdong Xiao]]    <small>(Department of Orthodontics, UNC)</small>
 
* [[#Peter_Black|Peter Black]]    <small>(BWH)</small>
 
* [[#Peter_Karasev|Peter Karasev]]    <small>(Georgia Tech)</small>
 
* [[#Peter_Savadjiev|Peter Savadjiev]]    <small>(Kitware))</small>
 
* [[#Pierre_Seroul|Pierre Seroul]]    <small>(UNC)</small>
 
* [[#Pietro_Nardelli|Pietro Nardelli]]    <small>(University College Cork)</small>
 
* [[#Please_direct_questions_or_suggestions_to_http:.2F.2Fgroups.google.com.2Fgroup.2Fplastimatch|Please direct questions or suggestions to http://groups.google.com/group/plastimatch]]
 
* [[#Polina_Goll|Polina Goll]]
 
* [[#Q|Q]]
 
* [[#Qing_Pan|Qing Pan]]    <small>(College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)</small>
 
* [[#r|r]]
 
* [[#Raul_San_Jose|Raul San Jose]]    <small>(SPL, BWH)</small>
 
* [[#Rob_MacLeod|Rob Mac Leod]]    <small>(Utah)</small>
 
* [[#Ron_Kikinis|Ron Kikinis]]    <small>(BWH)</small>
 
* [[#Ross_Whitaker|Ross Whitaker]]    <small>(Utah)</small>
 
* [[#Ruifeng_Chen|Ruifeng Chen]]    <small>(College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)</small>
 
* [[#S|S]]
 
* [[#s|s]]
 
* [[#Salma_Bengali|Salma Bengali]]    <small>(CARMA)</small>
 
* [[#Sam_Song|Sam Song]]
 
* [[#Santiago_Aja_Fern|Santiago Aja Fern]]    <small>(UVa)</small>
 
* [[#Sebastian_Tauscher|Sebastian Tauscher]]    <small>(LUH)</small>
 
* [[#Sebastien_Barr_eacute.3B|Sebastien Barr&eacute;]]    <small>(Kitware)</small>
 
* [[#Sebastien_Barre|Sebastien Barre]]
 
* [[#Shigeyuki_Naka|Shigeyuki Naka]]    <small>(SUMS)</small>
 
* [[#Soichiro_Tani|Soichiro Tani]]    <small>(BWH, SUMS)</small>
 
* [[#Sonia_Pujol|Sonia Pujol]]    <small>(SPL, BWH)</small>
 
* [[#Stefan_Lienhard|Stefan Lienhard]]
 
* [[#Stephen_Aylward|Stephen Aylward]]    <small>(Kitware)</small>
 
* [[#Stephen_R_Aylward|Stephen R Aylward]]    <small>(Kitware)</small>
 
* [[#Steve_Pieper|Steve Pieper]]    <small>(SPL)</small>
 
* [[#Sunil_Kumar|Sunil Kumar]]    <small>(Moka Creative, LLC, kumar.sunil.p@gmail.com)</small>
 
* [[#Sylvain_Bouix|Sylvain Bouix]]    <small>(BWH)</small>
 
* [[#Sylvain_Gouttard|Sylvain Gouttard]]
 
* [[#T|T]]
 
* [[#t|t]]
 
* [[#Tamas_Ungi|Tamas Ungi]]    <small>(PerkLab, Queen's University)</small>
 
* [[#the_University_of_North_Carolina_at_Chapel_Hill|the University of North Carolina at Chapel Hill]]    <small>(UNC)</small>
 
* [[#Tina_Kapur|Tina Kapur]]
 
* [[#Tobias_Penzkofer|Tobias Penzkofer]]
 
* [[#Tohru_Tani|Tohru Tani]]    <small>(SUMS)</small>
 
* [[#u|u]]
 
* [[#U|U]]
 
* [[#UNC_Medical_School|UNC Medical School]]
 
* [[#UofM_School_Of_Dentistry|Uof M School Of Dentistry]]
 
* [[#UofM_School_of_Dentistry|Uof M School of Dentistry]]
 
* [[#v|v]]
 
* [[#Vince_Magnotta|Vince Magnotta]]    <small>(UIowa)</small>
 
* [[#Vincent_A._Magnotta|Vincent A. Magnotta]]
 
* [[#Vincent_Magnotta|Vincent Magnotta]]
 
* [[#Vinicius_Boen|Vinicius Boen]]    <small>(Univ of Michigan)</small>
 
* [[#Vivek_Narayan|Vivek Narayan]]    <small>(BWH)</small>
 
* [[#W|W]]
 
* [[#Wendy_Plesniak|Wendy Plesniak]]    <small>(SPL, BWH)</small>
 
* [[#Xiaodong_Tao|Xiaodong Tao]]    <small>(GE)</small>
 
* [[#Xiaofeng_Liu|Xiaofeng Liu]]    <small>(GE GLobal Research)</small>
 
* [[#Xiaojun_Chen|Xiaojun Chen]]
 
* [[#y_Wells|y Wells]]
 
* [[#Yanling_Liu|Yanling Liu]]    <small>(SAIC-Frederick, NCI-Frederick)</small>
 
* [[#Yi_Gao|Yi Gao]]    <small>(BWH/UAB)</small>
 
* [[#Yinglin_Lee|Yinglin Lee]]    <small>(SPL, BWH)</small>
 
* [[#Yingxuan_Zhu|Yingxuan Zhu]]    <small>(GE)</small>
 
* [[#Yinpeng_Li|Yinpeng Li]]
 
* [[#Yixun_Liu|Yixun Liu]]    <small>(CRTC)</small>
 
* [[#Yogesh_Rathi|Yogesh Rathi]]    <small>(yogesh@bwh.harvard.edu)</small>
 
* [[#Yong_Zhang|Yong Zhang]]    <small>(IBM)</small>
 
* [[#Yumin_Yuan|Yumin Yuan]]
 
* [[#Yundi_Shi|Yundi Shi]]
 
== ' ==
 
* Dicom Rt Import Export Plugin
 
== ) ==
 
* Dicom Rt Import Export Plugin
 
== A ==
 
* Dicom Rt Import Export Plugin
 
== a ==
 
* Dicom Rt Import Export Plugin
 
== Akila Viswanathan ==
 
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
== Alan Morris ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Boolean REMOVEFilter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Connected Threshold Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Isolated Connected Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/Nightly/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
* [[Documentation/Nightly/Modules/LASegmentationWorkflow|LASegmentation Workflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/Nightly/Modules/ScarVisualization|Scar Visualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
== Alex Yarmakovich ==
 
* [[Documentation/Nightly/Modules/Models|Models]]    <small>(loadable, built-in)</small>
 
* Tractography Interactive Seeding    <small>(loadable, built-in)</small>
 
== Alex Yarmarkovich ==
 
* [[Documentation/Nightly/Modules/Data|Data]]    <small>(loadable, built-in)</small>
 
* Fiber Tract Measurements    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/Nightly/Modules/FinslerTractography|Finsler Tractography]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/Nightly/Modules/ImageLabelCombine|Image Label Combine]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/Volumes|Volumes]]    <small>(loadable, built-in)</small>
 
== Ali Ghayoor ==
 
* BRAINSTransform Convert    <small>(cli, built-in)</small>
 
* Perform Metric Test    <small>(cli, built-in)</small>
 
== Alireza Mehrtash ==
 
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
* [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]] extension)</small>
 
== Allen Tannenbaum ==
 
* [[Documentation/Nightly/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
* [[Documentation/Nightly/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
* [[Documentation/Nightly/Modules/SobolevSegmenter|Sobolev Segmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SobolevSegmenter|Sobolev Segmenter]] extension)</small>
 
== Amelie Meyer ==
 
* [[Documentation/Nightly/Modules/PlusRemote|Plus Remote]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
== Analysis Laboratory ==
 
* [[Documentation/Nightly/Extensions/CMFreg|Apply Matrix]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/LabelAddition|Label Addition]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/LabelExtraction|Label Extraction]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
== Andinet Enquobahrie ==
 
* [[Documentation/Nightly/Modules/PortPlacement|Port Placement]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]] extension)</small>
 
== Andras Lasso ==
 
* [[Documentation/Nightly/Modules/ContourComparison|Contour Comparison]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/ContourMorphology|Contour Morphology]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/Contours|Contours]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|Dicom Rt Import Export]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/DoseAccumulation|Dose Accumulation]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/DoseComparison|Dose Comparison]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/DoseVolumeHistogram|Dose Volume Histogram]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/Isodose|Isodose]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/MatlabCommander|Matlab Commander]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/Nightly/Modules/MatlabModuleGenerator|Matlab Module Generator]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/Nightly/Extensions/MultidimData|Metafile Importer]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/Nightly/Modules/PlusRemote|Plus Remote]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] extension)</small>
 
* [[Documentation/Nightly/Extensions/MultidimData|Sequence Browser]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/Nightly/Extensions/MultidimData|Sequences]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/Nightly/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip With Model]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip]] extension)</small>
 
* [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip With Roi]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip]] extension)</small>
 
== Andreas Freudling ==
 
* [[Documentation/Nightly/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
 
== Andrey Fedorov ==
 
* [[Documentation/Nightly/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/Nightly/Modules/BSplineToDeformationField|BSpline To Deformation Field]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ChangeTracker|Change Tracker]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
* Change Tracker Self Test
 
* [[Documentation/Nightly/Modules/CropVolume|Crop Volume]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/DICOMRWVMPlugin|DICOMRWVMPlugin]]
 
* DICOMSegmentation Plugin
 
* [[Documentation/Nightly/Modules/IntensityDifferenceMetric|Intensity Difference Metric]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
* [[Documentation/Nightly/Extensions/Reporting|Label To DICOMSEGConverter]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/Reporting|Reporting]] extension)</small>
 
* Label To DICOMSEGConverter Self Test
 
* [[Documentation/Nightly/Modules/MeshCompression|Mesh Compression]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/Nightly/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
 
* Multi Volume Importer Plugin
 
* [[Documentation/Nightly/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] extension)</small>
 
* [[Documentation/Nightly/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PkModeling|Pk Modeling]] extension)</small>
 
* [[Documentation/Nightly/Extensions/Reporting|Reporting]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/Reporting|Reporting]] extension)</small>
 
* Reporting Self Test
 
* [[Documentation/Nightly/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
* [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]] extension)</small>
 
* [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small>
 
== Andriy Kot ==
 
* [[Documentation/Nightly/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] extension)</small>
 
== Anonymous ==
 
* CLIROITest    <small>(cli, built-in)</small>
 
* EMSegment Transform To New Format    <small>(cli, built-in)</small>
 
== Antonio Damato ==
 
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
== Antonio Tristan Vega ==
 
* [[Documentation/Nightly/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/DWIUnbiasedNonLocalMeansFilter|DWIUnbiased Non Local Means Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/Nightly/Modules/FinslerTractography|Finsler Tractography]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
== Anuja Sharma ==
 
* [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
== Arie Nakhmani ==
 
* [[Documentation/Nightly/Modules/SobolevSegmenter|Sobolev Segmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SobolevSegmenter|Sobolev Segmenter]] extension)</small>
 
== Atsushi Yamada ==
 
* [[Documentation/Nightly/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
* [[Documentation/Nightly/Modules/PathExplorer|Path Explorer]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small>
 
== b ==
 
* Dicom Rt Import Export Plugin
 
== Beatriz Paniagua from Department of Orthodontics ==
 
* [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small>
 
== Benjamin Long ==
 
* [[Documentation/Nightly/Modules/SampleData|Sample Data]]    <small>(scripted, built-in)</small>
 
== Benjamin Yvernault ==
 
* [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
== Bill Lorensen ==
 
* [[Documentation/Nightly/Modules/AddScalarVolumes|Add Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/CheckerBoardFilter|Checker Board Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/CreateDICOMSeries|Create DICOMSeries]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
* Diffusion Tensor Test    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ExecutionModelTour|Execution Model Tour]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/GrayscaleGrindPeakImageFilter|Grayscale Grind Peak Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/GrayscaleModelMaker|Grayscale Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/HistogramMatching|Histogram Matching]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/MedianImageFilter|Median Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ModelMaker|Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/MultiplyScalarVolumes|Multiply Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/OrientScalarVolume|Orient Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/OtsuThresholdImageFilter|Otsu Threshold Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ResampleScalarVolume|Resample Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Extensions/IASEM|Spacing Aware Curvature Diffusion]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/Nightly/Modules/SubtractScalarVolumes|Subtract Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/SwissSkullStripper|Swiss Skull Stripper]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]] extension)</small>
 
* [[Documentation/Nightly/Modules/VotingBinaryHoleFillingImageFilter|Voting Binary Hole Filling Image Filter]]    <small>(cli, built-in)</small>
 
== Brad Davis ==
 
* EMSegment Command Line    <small>(cli, built-in)</small>
 
== Bradley Lowekamp ==
 
* [[Documentation/Nightly/Extensions/IASEM|Bin Shrink]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/Nightly/Extensions/IASEM|Double Threshold Effect]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/Nightly/Extensions/IASEM|IASEMImport]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/Nightly/Extensions/IASEM|IASEMImport Series]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/Nightly/Extensions/IASEM|Label Object Statistics]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/Nightly/Modules/SimpleFilters|Simple Filters]]    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Extensions/IASEM|Spacing Aware Curvature Diffusion]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
 
== Brian Zenger ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
== BWH ==
 
* DICOMSegmentation Plugin
 
* Multi Volume Importer Plugin
 
== C ==
 
* Dicom Rt Import Export Plugin
 
== Carl-Fredrik Westin ==
 
* [[Documentation/Nightly/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
== Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez ==
 
* [[Documentation/Nightly/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/Nightly/Modules/FinslerTractography|Finsler Tractography]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
== Casey B Goodlett ==
 
* [[Documentation/Nightly/Modules/ExpertAutomatedRegistration|Expert Automated Registration]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/FiducialRegistration|Fiducial Registration]]    <small>(cli, built-in)</small>
 
== Charles Marion ==
 
* [[Documentation/Nightly/Modules/DataStore|Data Store]]    <small>(loadable, built-in)</small>
 
== Christian Baumgartner ==
 
* [[Documentation/Nightly/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* [[Documentation/Nightly/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
== Csaba Pinter ==
 
* [[Documentation/Nightly/Extensions/SlicerRT|Batch Contour Conversion]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|Beams]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/ContourComparison|Contour Comparison]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/ContourMorphology|Contour Morphology]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/Contours|Contours]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/Data|Data]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|Dicom Rt Import Export]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* Dicom Rt Import Self Test
 
* [[Documentation/Nightly/Modules/DoseAccumulation|Dose Accumulation]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/DoseComparison|Dose Comparison]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/DoseVolumeHistogram|Dose Volume Histogram]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|Dvh Comparison]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo]    <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
* [[Documentation/Nightly/Modules/Isodose|Isodose]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* NAMIC Tutorial 2013June Self Test
 
* [[Documentation/Nightly/Extensions/SlicerRT|Planar Image]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/SubjectHierarchy|Subject Hierarchy]]    <small>(loadable, built-in)</small>
 
* Subject Hierarchy Core Plugins Self Test
 
* Subject Hierarchy Generic Self Test
 
* [[Documentation/Nightly/Extensions/SlicerRT|Vff File Reader]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== d ==
 
* Dicom Rt Import Export Plugin
 
== Dan Marcus ==
 
* [[Documentation/Nightly/Extensions/XNATSlicer|Xnat Slicer]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] extension)</small>
 
== Daniel Blezek ==
 
* [[Documentation/Nightly/Modules/ExecutionModelTour|Execution Model Tour]]    <small>(cli, built-in)</small>
 
== Daniel Haehn ==
 
* [[Documentation/Nightly/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 
* [http://slicer.vmtk.org/ Centerline Computation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/Nightly/Modules/EMSegment|EMSegment]]    <small>(loadable, built-in)</small>
 
* EMSegment Command Line    <small>(cli, built-in)</small>
 
* [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/Nightly/Modules/MergeModels|Merge Models]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/SceneViews|Scene Views]]    <small>(loadable, built-in)</small>
 
* [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
== Danny Perry ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/Nightly/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
* [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
== Demian Wassermann ==
 
* DICOM2Full Brain Tractography    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]]    <small>(cli, built-in)</small>
 
* Fiber Bundle Label Select    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/Nightly/Modules/FinslerTractography|Finsler Tractography]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* test tractography display
 
* [[Documentation/Nightly/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]]    <small>(cli, built-in)</small>
 
== Dinggang Shen ==
 
* [[Documentation/Nightly/Extensions/MABMIS|IGR3D MABMIS Testing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] extension)</small>
 
* [[Documentation/Nightly/Extensions/MABMIS|IGR3D MABMIS Training]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] extension)</small>
 
== Dirk Padfield ==
 
* [[Documentation/Nightly/Modules/LabelMapSmoothing|Label Map Smoothing]]    <small>(cli, built-in)</small>
 
== Dominik Meier ==
 
* [[Documentation/Nightly/Modules/FiducialRegistration|Fiducial Registration]]    <small>(cli, built-in)</small>
 
== e ==
 
* Dicom Rt Import Export Plugin
 
== er ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
== Ethan Ulrich ==
 
* [[Documentation/Nightly/Modules/DICOMPETSUVPlugin|DICOMPETSUVPlugin]]
 
* [[Documentation/Nightly/Modules/DICOMRWVMPlugin|DICOMRWVMPlugin]]
 
* [[Documentation/Nightly/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
== Eugene Kholmovski ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
== ez ==
 
* [[Documentation/Nightly/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/DWIUnbiasedNonLocalMeansFilter|DWIUnbiased Non Local Means Filter]]    <small>(cli, built-in)</small>
 
== Fotis Drakopoulos ==
 
* [[Documentation/Nightly/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/Nightly/Modules/MeshCompression|Mesh Compression]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/Nightly/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] extension)</small>
 
== Francois Budin ==
 
* [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small>
 
* [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]] extension)</small>
 
* [[Documentation/Nightly/Modules/ResampleDTIVolume|Resample DTIVolume]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ResampleScalarVectorDWIVolume|Resample Scalar Vector DWIVolume]]    <small>(cli, built-in)</small>
 
== Franklin King ==
 
* [[Documentation/Nightly/Modules/CollectFiducials|Collect Fiducials]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Pivot Calibration]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Modules/PlusRemote|Plus Remote]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis Monitoring]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
* [[Documentation/Nightly/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Transform Fusion]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
== g ==
 
* Dicom Rt Import Export Plugin
 
== Greg Gardner ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/Nightly/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
* [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
== Greg Harris ==
 
* [[Documentation/Nightly/Modules/BRAINSDemonWarp|BRAINSDemon Warp]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/BRAINSResample|BRAINSResample]]    <small>(cli, built-in)</small>
 
* VBRAINSDemon Warp    <small>(cli, built-in)</small>
 
== Gregory Sharp ==
 
* [[Documentation/Nightly/Modules/DicomSroExport|Dicom Sro Export]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|Plm Register]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== Guido Gerig ==
 
* [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/Nightly/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli, built-in)</small>
 
== Guillaume Pernelle ==
 
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
== H ==
 
* Dicom Rt Import Export Plugin
 
== Hans J. Johnson ==
 
* [[Documentation/Nightly/Modules/BRAINSDemonWarp|BRAINSDemon Warp]]   <small>(cli, built-in)</small>
 
 
* [[Documentation/Nightly/Modules/BRAINSFit|BRAINSFit]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/BRAINSFit|BRAINSFit]]    <small>(cli, built-in)</small>
* BRAINSROIAuto   <small>(cli, built-in)</small>
+
* BRAINSLabelStats   <small>(cli, built-in)</small>
* BRAINSTransform Convert    <small>(cli, built-in)</small>
 
* VBRAINSDemon Warp    <small>(cli, built-in)</small>
 
== Hans Johnson ==
 
 
* [[Documentation/Nightly/Modules/BRAINSResample|BRAINSResample]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/BRAINSResample|BRAINSResample]]    <small>(cli, built-in)</small>
 
* BRAINSResize    <small>(cli, built-in)</small>
 
* BRAINSResize    <small>(cli, built-in)</small>
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures]    <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] extension)</small>
 
* DWIConvert    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/Nightly/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
* [[Documentation/Nightly/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
== hans-johnson -at- uiowa.edu ==
 
* [[Documentation/Nightly/Modules/BRAINSFit|BRAINSFit]]    <small>(cli, built-in)</small>
 
* BRAINSROIAuto    <small>(cli, built-in)</small>
 
== http://www.psychiatry.uiowa.edu ==
 
* [[Documentation/Nightly/Modules/BRAINSFit|BRAINSFit]]    <small>(cli, built-in)</small>
 
 
* BRAINSROIAuto    <small>(cli, built-in)</small>
 
* BRAINSROIAuto    <small>(cli, built-in)</small>
== i ==
+
* BRAINSStripRotation   <small>(cli, built-in)</small>
* Dicom Rt Import Export Plugin
+
* BRAINSTransformConvert    <small>(cli, built-in)</small>
== Ipek Oguz ==
+
* [[Documentation/Nightly/Extensions/SlicerIGT|BreachWarning]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
* [[Documentation/Nightly/Extensions/UKFTractography|Convert VTK]]   <small>(cli, bundled in [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]] extension)</small>
+
* [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|CarreraSlice]]    <small>(loadable, bundled in [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|CarreraSlice]] extension)</small>
* [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]] extension)</small>
+
* [[Documentation/Nightly/Modules/CastScalarVolume|CastScalarVolume]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]] extension)</small>
+
* [http://slicer.vmtk.org/ CenterlineComputation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
== Ivan Kolesov ==
+
* [[Documentation/Nightly/Modules/ChangeTracker|ChangeTracker]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ChangeTracker|ChangeTracker]] extension)</small>
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
+
* [[Documentation/Nightly/Modules/CheckerBoardFilter|CheckerBoardFilter]]    <small>(cli, built-in)</small>
== Jan Egger ==
+
* [http://www.chestimagingplatform.org CIP_]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/iGyne|i Gyne]] extension)</small>
+
* [http://www.chestimagingplatform.org CIP_BodyComposition]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
== Jayender Jagadeesan ==
+
* [http://www.chestimagingplatform.org CIP_CalciumScoring]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Modules/HeterogeneityCAD|Heterogeneity CAD]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] extension)</small>
+
* [http://www.chestimagingplatform.org CIP_Common]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Modules/SegmentCAD|Segment CAD]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] extension)</small>
+
* [http://www.chestimagingplatform.org CIP_InteractiveLobeSegmentation]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Modules/TrackerStabilizer|Tracker Stabilizer]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small>
+
* [http://www.chestimagingplatform.org CIP_LesionModel]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
== Jean-Baptiste Berger ==
+
* [http://www.chestimagingplatform.org CIP_MIPViewer]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Modules/DataStore|Data Store]]    <small>(loadable, built-in)</small>
+
* [http://www.chestimagingplatform.org CIP_PAARatio]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
+
* [http://www.chestimagingplatform.org CIP_ParenchymaAnalysis]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|Fiber Compare]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
+
* [http://www.chestimagingplatform.org CIP_ParenchymaSubtypeTraining]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|Merge Stat With Fiber]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
+
* [http://www.chestimagingplatform.org CIP_PointsLabelling]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
== Jean-Christophe Fillion-Robin ==
+
* [http://www.chestimagingplatform.org CIP_TracheaStentPlanning]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* CLI4Test
+
* [http://www.chestimagingplatform.org ClassifyFissureParticles]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Modules/DataStore|Data Store]]    <small>(loadable, built-in)</small>
+
* [[Documentation/Nightly/Extensions/CleaverExtension|CleaverCLI]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CleaverExtension|CleaverExtension]] extension)</small>
* [[Documentation/Nightly/Modules/FastGrowCut|Fast Grow Cut]]    <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small>
+
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkitAutomaticLeftAtrialScar]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac_MRI_Toolkit] extension)</small>
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
+
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkitAxialDilate]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac_MRI_Toolkit] extension)</small>
* fiber visibility crash2438
+
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkitBooleanREMOVEFilter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac_MRI_Toolkit] extension)</small>
* label Toggle Bug2049
+
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkitConnectedThresholdFilter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac_MRI_Toolkit] extension)</small>
* [[Documentation/Nightly/Modules/MatlabCommander|Matlab Commander]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
+
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkitInhomogeneityCorrection]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac_MRI_Toolkit] extension)</small>
* [[Documentation/Nightly/Modules/MatlabModuleGenerator|Matlab Module Generator]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
+
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkitIsolatedConnectedFilter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac_MRI_Toolkit] extension)</small>
* [[Documentation/Nightly/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
+
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkitLASegmentationGraphCuts]   <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac_MRI_Toolkit] extension)</small>
* [[Documentation/Nightly/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
+
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkitPVAntrumCut]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac_MRI_Toolkit] extension)</small>
* [[Documentation/Nightly/Modules/SampleData|Sample Data]]    <small>(scripted, built-in)</small>
+
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkitRegistration]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac_MRI_Toolkit] extension)</small>
* [[Documentation/Nightly/Modules/SimpleFilters|Simple Filters]]   <small>(scripted, built-in)</small>
+
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkitRegistrationBRAINSFit]   <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac_MRI_Toolkit] extension)</small>
* [[Documentation/Nightly/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small>
+
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkitWizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac_MRI_Toolkit] extension)</small>
* [[Documentation/Nightly/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
+
* [[Documentation/Nightly/Modules/CollectFiducials|CollectFiducials]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
* [[Documentation/Nightly/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/Welcome|Welcome]]    <small>(loadable, built-in)</small>
 
== Jennifer Andrea ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|Vff File Reader]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== Jessica Forbes ==
 
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures]    <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] extension)</small>
 
== Jim Miller ==
 
* Charting   <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PkModeling|Pk Modeling]] extension)</small>
 
* [[Documentation/Nightly/Modules/SimpleRegionGrowingSegmentation|Simple Region Growing Segmentation]]    <small>(cli, built-in)</small>
 
* Slice Link Logic    <small>(scripted, built-in)</small>
 
* Slicer4Minute   <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 
* View Controllers Slice Interpolation Bug1926
 
== Johan Andruejol ==
 
* [[Documentation/Nightly/Modules/Units|Units]]    <small>(loadable, built-in)</small>
 
== John Evans ==
 
* [[Documentation/Nightly/Modules/PkModeling|Pk Modeling]]   <small>(cli, bundled in [[Documentation/Nightly/Extensions/PkModeling|Pk Modeling]] extension)</small>
 
== Jonathan Bronson ==
 
* [[Documentation/Nightly/Extensions/CleaverExtension|Cleaver CLI]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CleaverExtension|Cleaver Extension]] extension)</small>
 
== Josh Cates ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Boolean REMOVEFilter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Connected Threshold Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Isolated Connected Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/Nightly/Modules/LabelMapSmoothing|Label Map Smoothing]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
* [[Documentation/Nightly/Modules/LASegmentationWorkflow|LASegmentation Workflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/Nightly/Modules/ScarVisualization|Scar Visualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
== Joy Matsui ==
 
* DWIConvert    <small>(cli, built-in)</small>
 
== Julien Finet ==
 
* [[Documentation/Nightly/Modules/Cameras|Cameras]]    <small>(loadable, built-in)</small>
 
 
* [[Documentation/Nightly/Modules/Colors|Colors]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/Colors|Colors]]    <small>(loadable, built-in)</small>
 +
* [[Documentation/Nightly/Modules/CompareVolumes|CompareVolumes]]    <small>(scripted, built-in)</small>
 +
* [http://www.chestimagingplatform.org ComputeCrossSectionalArea]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org ComputeDistanceMap]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org ComputeFeatureStrength]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org ComputeFissureFeatureVectors]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org ComputeIntensityStatistics]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org ConvertChestRegionChestTypeToLabelMapValue]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org ConvertDicom]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org ConvertLabelMapValueToChestRegionChestType]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [[Documentation/Nightly/Extensions/UKFTractography|ConvertVTK]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]] extension)</small>
 +
* [[Documentation/Nightly/Modules/CornerAnnotation|CornerAnnotation]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|CornerAnnotation]] extension)</small>
 +
* [[Documentation/Nightly/Modules/CreateDICOMSeries|CreateDICOMSeries]]    <small>(cli, built-in)</small>
 +
* [[Documentation/Nightly/Extensions/SlicerIGT|CreateModels]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
 +
* [http://www.chestimagingplatform.org CropLung]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [[Documentation/Nightly/Modules/CropVolume|CropVolume]]    <small>(loadable, built-in)</small>
 +
* [[Documentation/Nightly/Modules/CurvatureAnisotropicDiffusion|CurvatureAnisotropicDiffusion]]    <small>(cli, built-in)</small>
 +
* [[Documentation/Nightly/Extensions/CurveMaker|CurveMaker]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CurveMaker|CurveMaker]] extension)</small>
 
* [[Documentation/Nightly/Modules/Data|Data]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/Data|Data]]    <small>(loadable, built-in)</small>
* Double Arrays   <small>(loadable, built-in)</small>
+
* [[Documentation/Nightly/Modules/DatabaseInteractor|DatabaseInteractor]]   <small>(scripted, bundled in [[Documentation/Nightly/Extensions/DatabaseInteractor|DatabaseInteractor]] extension)</small>
* [[Documentation/Nightly/Modules/EventBroker|Event Broker]]
+
* [[Documentation/Nightly/Extensions/DatabaseInteractor|DatabaseInteractorLib]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/DatabaseInteractor|DatabaseInteractor]] extension)</small>
* [[Documentation/Nightly/Modules/ImageMaker|Image Maker]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/ImageMaker|Image Maker]] extension)</small>
+
* [[Documentation/Nightly/Modules/DataProbe|DataProbe]]    <small>(scripted, built-in)</small>
* [[Documentation/Nightly/Modules/Models|Models]]    <small>(loadable, built-in)</small>
+
* [[Documentation/Nightly/Modules/DataStore|DataStore]]    <small>(loadable, built-in)</small>
* [[Documentation/Nightly/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
+
* [[Documentation/Nightly/Modules/DeepInfer|DeepInfer]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/DeepInfer|DeepInfer]] extension)</small>
* [[Documentation/Nightly/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
+
* [[Documentation/Nightly/Modules/DiceComputation|DiceComputation]]   <small>(loadable, bundled in [[Documentation/Nightly/Extensions/DiceComputation|DiceComputation]] extension)</small>
* Scene Performance   <small>(scripted, built-in)</small>
+
* [[Documentation/Nightly/Modules/DICOM|DICOM]]    <small>(scripted, built-in)</small>
* [[Documentation/Nightly/Modules/ThresholdScalarVolume|Threshold Scalar Volume]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Extensions/SlicerDMRI|DICOM2FullBrainTractography]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|SlicerDMRI]] extension)</small>
* [[Documentation/Nightly/Modules/TractographyDisplay|Tractography Display]]    <small>(loadable, built-in)</small>
+
* DICOMPatcher    <small>(scripted, built-in)</small>
* [[Documentation/Nightly/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
+
* [[Documentation/Nightly/Extensions/SlicerRT|DicomRtImportExport]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
* [[Documentation/Nightly/Modules/Units|Units]]    <small>(loadable, built-in)</small>
+
* [[Documentation/Nightly/Modules/DicomSroExport|DicomSroExport]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
* [[Documentation/Nightly/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
+
* [[Documentation/Nightly/Modules/DicomSroImport|DicomSroImport]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
* [[Documentation/Nightly/Modules/Volumes|Volumes]]    <small>(loadable, built-in)</small>
+
* [[Documentation/Nightly/Extensions/SlicerDMRI|DICOMTract_to_VTK]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|SlicerDMRI]] extension)</small>
== Julien Jomier ==
+
* [[Documentation/Nightly/Modules/DiffusionTensorScalarMeasurements|DiffusionTensorScalarMeasurements]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|SlicerDMRI]] extension)</small>
* [[Documentation/Nightly/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/DiffusionWeightedVolumeMasking|DiffusionWeightedVolumeMasking]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|SlicerDMRI]] extension)</small>
== Junichi Tokuda ==
+
* [[Documentation/Nightly/Modules/DistanceMapBasedRegistration|DistanceMapBasedRegistration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerProstate|SlicerProstate]] extension)</small>
* [[Documentation/Nightly/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
+
* [[Documentation/Nightly/Modules/DMRIInstall|DMRIInstall]]    <small>(scripted, built-in)</small>
* [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]] extension)</small>
+
* [[Documentation/Nightly/Modules/DoseAccumulation|DoseAccumulation]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
* [[Documentation/Nightly/Extensions/ErodeDilateLabel|Dilate Label]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
+
* [[Documentation/Nightly/Modules/DoseComparison|DoseComparison]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
* [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Label]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
+
* [[Documentation/Nightly/Extensions/MarginCalculator|DoseMorphology]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MarginCalculator|MarginCalculator]] extension)</small>
* [[Documentation/Nightly/Extensions/LightWeightRobotIGT|Light Weight Robot IGT]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/LightWeightRobotIGT|Light Weight Robot IGT]] extension)</small>
+
* [[Documentation/Nightly/Modules/DoseVolumeHistogram|DoseVolumeHistogram]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
* [[Documentation/Nightly/Modules/PathExplorer|Path Explorer]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
+
* [[Documentation/Nightly/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
* [[Documentation/Nightly/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small>
+
* [[Documentation/Nightly/Modules/dPetBrainQuantification|dPetBrainQuantification]]    <small>(scripted, bundled in [http://gti-fing.github.io/SlicerPetSpectAnalysis PetSpectAnalysis] extension)</small>
* [[Documentation/Nightly/Modules/VolumeResliceDriver|Volume Reslice Driver]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
+
* [http://slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/DSC_MRI_Analysis DSCMRIAnalysis]   <small>(cli, bundled in [http://slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/DSC_MRI_Analysis DSCMRIAnalysis] extension)</small>
== K ==
+
* DumpSEGFrame   <small>(cli)</small>
* Dicom Rt Import Export Plugin
+
* [[Documentation/Nightly/Extensions/SlicerRT|DvhComparison]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
== Kent Williams ==
 
* BRAINSDWICleanup   <small>(cli, built-in)</small>
 
* BRAINSTransform Convert   <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
 
* DWIConvert    <small>(cli, built-in)</small>
 
* DWIConvert    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]] extension)</small>
+
* [[Documentation/Nightly/Modules/DWIToDTIEstimation|DWIToDTIEstimation]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|SlicerDMRI]] extension)</small>
== Kent WIlliams ==
+
* [[Documentation/Nightly/Modules/DWModeling|DWModeling]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerProstate|SlicerProstate]] extension)</small>
* BRAINSStrip Rotation    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/EasyClip|EasyClip]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/EasyClip|EasyClip]] extension)</small>
== Kevin Alex ==
+
* [[Documentation/Nightly/Modules/Editor|Editor]]    <small>(scripted, built-in)</small>
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
== Kevin Wang ==
 
* Colors Scalar Bar Self Test
 
* [[Documentation/Nightly/Modules/ContourComparison|Contour Comparison]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/ContourMorphology|Contour Morphology]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/Contours|Contours]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|Dicom Rt Import Export]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/DicomSroExport|Dicom Sro Export]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/DicomSroImport|Dicom Sro Import]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* Dicom Sro Import Plugin
 
* [[Documentation/Nightly/Modules/DoseAccumulation|Dose Accumulation]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/DoseComparison|Dose Comparison]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/DoseVolumeHistogram|Dose Volume Histogram]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/Isodose|Isodose]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/MatlabCommander|Matlab Commander]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/Nightly/Modules/MatlabModuleGenerator|Matlab Module Generator]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/Nightly/Extensions/MultidimData|Sequence Browser]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/Nightly/Extensions/MultidimData|Sequences]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small>
 
== Kilian Pohl ==
 
* [[Documentation/Nightly/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/ChangeTracker|Change Tracker]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
 
* [[Documentation/Nightly/Modules/EMSegment|EMSegment]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/EMSegment|EMSegment]]    <small>(loadable, built-in)</small>
* EMSegment Command Line   <small>(cli, built-in)</small>
+
* EMSegmentCommandLine   <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/SceneViews|Scene Views]]    <small>(loadable, built-in)</small>
+
* EMSegmentQuick   <small>(loadable, built-in)</small>
== Koichiro Murakami ==
+
* EMSegmentTransformToNewFormat   <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
+
* [[Documentation/Nightly/Modules/EncodeSEG|EncodeSEG]]    <small>(cli)</small>
* [[Documentation/Nightly/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small>
 
== Kyle Sunderl ==
 
* [[Documentation/Nightly/Extensions/SlicerRT|Dvh Comparison]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== L ==
 
* Dicom Rt Import Export Plugin
 
== Lauren Barber ==
 
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
== Lauren O'Donnell ==
 
* Fiber Bundle Label Select    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ProbeVolumeWithModel|Probe Volume With Model]]    <small>(cli, built-in)</small>
 
== Laurent Chauvin ==
 
* [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]] extension)</small>
 
* [[Documentation/Nightly/Modules/DiceComputation|Dice Computation]]   <small>(loadable, bundled in [[Documentation/Nightly/Extensions/DiceComputation|Dice Computation]] extension)</small>
 
* [[Documentation/Nightly/Modules/PathExplorer|Path Explorer]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small>
 
* [[Documentation/Nightly/Modules/TrackerStabilizer|Tracker Stabilizer]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small>
 
== Liang-Jia Zhu ==
 
* [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
== Liangjia Zhu ==
 
* [[Documentation/Nightly/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
== Luca Antiga ==
 
* [http://slicer.vmtk.org/ Centerline Computation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/Nightly/Modules/SurfaceToolbox|Surface Toolbox]]    <small>(scripted, built-in)</small>
 
* [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
== Luis G. Torres ==
 
* [[Documentation/Nightly/Modules/PortPlacement|Port Placement]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]] extension)</small>
 
== Luping Fang ==
 
* [[Documentation/Nightly/Modules/GyroGuide|Gyro Guide]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] extension)</small>
 
== Marc Niethammer ==
 
* [[Documentation/Nightly/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]]    <small>(cli, built-in)</small>
 
== Marcel Prastawa prastawa@sci.utah.edu ==
 
* [http://www.nitrc.org/projects/abc ABC]    <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small>
 
== Mark Scully ==
 
* DWIConvert    <small>(cli, built-in)</small>
 
== Markus Van Tol ==
 
* [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/Nightly/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
== Martin Styner ==
 
* [[Documentation/Nightly/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/Nightly/Modules/ExtractSkeleton|Extract Skeleton]]   <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
== Mason Winsauer ==
 
* [[Documentation/Nightly/Extensions/CMFreg|Apply Matrix]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/LabelAddition|Label Addition]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/LabelExtraction|Label Extraction]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
== Matt Lougheed ==
 
* [[Documentation/Nightly/Modules/ResectionVolume|Resection Volume]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ResectionPlanner|Resection Planner]] extension)</small>
 
* [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip With Model]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip]] extension)</small>
 
== Mattea Welch ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
== Matthew Holden ==
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Breach Warning]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Fiducial Registration Wizard]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/MultidimData|Metafile Importer]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/Nightly/Extensions/PerkTutor|Python Metrics Calculator]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/Nightly/Extensions/MultidimData|Sequence Browser]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/Nightly/Extensions/MultidimData|Sequences]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small>
 
== Matthew S. Holden ==
 
* [[Documentation/Nightly/Modules/PerkEvaluator|Perk Evaluator]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/Nightly/Modules/TransformRecorder|Transform Recorder]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/Nightly/Modules/WorkflowSegmentation|Workflow Segmentation]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
== Matthew Woehlke ==
 
* [[Documentation/Nightly/Modules/ExtensionWizard|Extension Wizard]]    <small>(scripted, built-in)</small>
 
== Michael Jeulin-Lagarrigue ==
 
* [[Documentation/Nightly/Modules/Reformat|Reformat]]    <small>(loadable, built-in)</small>
 
== Minjeong Kim ==
 
* [[Documentation/Nightly/Extensions/MABMIS|IGR3D MABMIS Testing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] extension)</small>
 
* [[Documentation/Nightly/Extensions/MABMIS|IGR3D MABMIS Training]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] extension)</small>
 
== n ==
 
* Dicom Rt Import Export Plugin
 
== N ==
 
* Dicom Rt Import Export Plugin
 
== Nabgha Fahrat ==
 
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
== Neuro Image Resarch ==
 
* [[Documentation/Nightly/Extensions/CMFreg|Apply Matrix]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/LabelAddition|Label Addition]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/LabelExtraction|Label Extraction]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
== Nicholas Herlambang ==
 
* JRC2013Vis
 
== Nick Tustison ==
 
* [[Documentation/Nightly/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]]    <small>(cli, built-in)</small>
 
== Nicole Aucoin ==
 
* [[Documentation/Nightly/Modules/ACPCTransform|ACPCTransform]]    <small>(cli, built-in)</small>
 
* Add Many Markups Fiducial Test
 
* [[Documentation/Nightly/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/CastScalarVolume|Cast Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/Colors|Colors]]    <small>(loadable, built-in)</small>
 
* Colors Scalar Bar Self Test
 
* [[Documentation/Nightly/Modules/Data|Data]]    <small>(loadable, built-in)</small>
 
* Fiducial Layout Switch Bug1914
 
* [[Documentation/Nightly/Modules/GrayscaleModelMaker|Grayscale Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/Markups|Markups]]    <small>(loadable, built-in)</small>
 
* Markups In Compare Viewers Self Test
 
* Markups In Views Self Test
 
* [[Documentation/Nightly/Modules/MaskScalarVolume|Mask Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/MergeModels|Merge Models]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ModelMaker|Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/Models|Models]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/ModelToLabelMap|Model To Label Map]]    <small>(cli, built-in)</small>
 
* Neurosurgical Planning Tutorial Markups Self Test
 
* [[Documentation/Nightly/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/Reporting|Reporting]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/Reporting|Reporting]] extension)</small>
 
* [[Documentation/Nightly/Modules/SceneViews|Scene Views]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
* [[Documentation/Nightly/Modules/ThresholdScalarVolume|Threshold Scalar Volume]]    <small>(cli, built-in)</small>
 
* Volume Rendering Scene Close    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Modules/Volumes|Volumes]]    <small>(loadable, built-in)</small>
 
== Nigel Goh ==
 
* [[Documentation/Nightly/Modules/ThingiverseBrowser|Thingiverse Browser]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ThingiverseBrowser|Thingiverse Browser]] extension)</small>
 
== Nikos Chrisochoides ==
 
* [[Documentation/Nightly/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/Nightly/Modules/MeshCompression|Mesh Compression]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/Nightly/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] extension)</small>
 
== o ==
 
* Dicom Rt Import Export Plugin
 
== Olivier Clatz ==
 
* [[Documentation/Nightly/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] extension)</small>
 
== P ==
 
* Dicom Rt Import Export Plugin
 
== Paolo Zaffino ==
 
* [[Documentation/Nightly/Extensions/SlicerRT|Plastimatch Py]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== Pat Marion ==
 
* [[Documentation/Nightly/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small>
 
== Paul Mercea ==
 
* [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
== Pengdong Xiao ==
 
* [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small>
 
== Peter Black ==
 
* [[Documentation/Nightly/Modules/ChangeTracker|Change Tracker]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
== Peter Karasev ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
== Peter Savadjiev ==
 
* [[Documentation/Nightly/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/Nightly/Modules/FinslerTractography|Finsler Tractography]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/Nightly/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
== Pierre Seroul ==
 
* [[Documentation/Nightly/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli, built-in)</small>
 
== Pietro Nardelli ==
 
* [[Documentation/Nightly/Modules/AirwaySegmentation|Airway Segmentation]]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation] extension)</small>
 
* [[Documentation/Nightly/Extensions/AirwaySegmentation|Airway Segmentation CLI]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/AirwaySegmentation|Airway Segmentation]] extension)</small>
 
== Please direct questions or suggestions to http://groups.google.com/group/plastimatch ==
 
* [[Documentation/Nightly/Extensions/SlicerRT|plastimatch slicer bspline]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|plastimatch slicer dicomrt export]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|plastimatch slicer dicomrt import]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|plastimatch slicer landwarp]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|plastimatch slicer xformwarp]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== Polina Goll ==
 
* EMSegment Command Line    <small>(cli, built-in)</small>
 
== Q ==
 
* Dicom Rt Import Export Plugin
 
== Qing Pan ==
 
* [[Documentation/Nightly/Modules/GyroGuide|Gyro Guide]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] extension)</small>
 
== r ==
 
* Dicom Rt Import Export Plugin
 
== Raul San Jose ==
 
* [[Documentation/Nightly/Modules/DiffusionTensorScalarMeasurements|Diffusion Tensor Scalar Measurements]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/DWIToDTIEstimation|DWITo DTIEstimation]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]]    <small>(cli, built-in)</small>
 
== Rob MacLeod ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Boolean REMOVEFilter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Connected Threshold Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Isolated Connected Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/Nightly/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
* [[Documentation/Nightly/Modules/LASegmentationWorkflow|LASegmentation Workflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/Nightly/Modules/ScarVisualization|Scar Visualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
== Ron Kikinis ==
 
* [[Documentation/Nightly/Modules/ACPCTransform|ACPCTransform]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/CastScalarVolume|Cast Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ChangeTracker|Change Tracker]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
* [[Documentation/Nightly/Modules/CropVolume|Crop Volume]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/MaskScalarVolume|Mask Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/MergeModels|Merge Models]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ModelMaker|Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/Nightly/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/SurfaceToolbox|Surface Toolbox]]    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
* [[Documentation/Nightly/Modules/ThresholdScalarVolume|Threshold Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
 
== Ross Whitaker ==
 
* [[Documentation/Nightly/Modules/LabelMapSmoothing|Label Map Smoothing]]    <small>(cli, built-in)</small>
 
== Ruifeng Chen ==
 
* [[Documentation/Nightly/Modules/GyroGuide|Gyro Guide]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] extension)</small>
 
== S ==
 
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
== s ==
 
* Dicom Rt Import Export Plugin
 
== Salma Bengali ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Boolean REMOVEFilter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Connected Threshold Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Isolated Connected Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/Nightly/Modules/LASegmentationWorkflow|LASegmentation Workflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/Nightly/Modules/ScarVisualization|Scar Visualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
== Sam Song ==
 
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/iGyne|i Gyne]] extension)</small>
 
== Santiago Aja Fern ==
 
* [[Documentation/Nightly/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/DWIUnbiasedNonLocalMeansFilter|DWIUnbiased Non Local Means Filter]]    <small>(cli, built-in)</small>
 
== Sebastian Tauscher ==
 
* [[Documentation/Nightly/Extensions/LightWeightRobotIGT|Light Weight Robot IGT]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/LightWeightRobotIGT|Light Weight Robot IGT]] extension)</small>
 
== Sebastien Barr&eacute; ==
 
* [[Documentation/Nightly/Modules/Cameras|Cameras]]    <small>(loadable, built-in)</small>
 
== Sebastien Barre ==
 
* EMSegment Command Line    <small>(cli, built-in)</small>
 
== Shigeyuki Naka ==
 
* [[Documentation/Nightly/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
== Soichiro Tani ==
 
* [[Documentation/Nightly/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
== Sonia Pujol ==
 
* [[Documentation/Nightly/Modules/DiceComputation|Dice Computation]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/DiceComputation|Dice Computation]] extension)</small>
 
* DTIexport    <small>(cli, built-in)</small>
 
* DTIimport    <small>(cli, built-in)</small>
 
== Stefan Lienhard ==
 
* [[Documentation/Nightly/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* [[Documentation/Nightly/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
== Stephen Aylward ==
 
* [[Documentation/Nightly/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]]    <small>(cli, built-in)</small>
 
== Stephen R Aylward ==
 
* [[Documentation/Nightly/Modules/ExpertAutomatedRegistration|Expert Automated Registration]]    <small>(cli, built-in)</small>
 
== Steve Pieper ==
 
* Atlas Tests
 
* [[Documentation/Nightly/Extensions/IASEM|Binary Watershed Effect]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
 
* [http://slicer.vmtk.org/ Centerline Computation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/Nightly/Modules/CompareVolumes|Compare Volumes]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/DataProbe|Data Probe]]    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Modules/DICOM|DICOM]]    <small>(scripted, built-in)</small>
 
* DICOMDiffusion Volume Plugin
 
* DICOMLongitudinal PETCTPlugin
 
* DICOMScalar Volume Plugin
 
* DICOMSlicer Data Bundle Plugin
 
 
* [[Documentation/Nightly/Modules/Endoscopy|Endoscopy]]    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Modules/Endoscopy|Endoscopy]]    <small>(scripted, built-in)</small>
* fiber visibility crash2438
+
* [http://www.chestimagingplatform.org EnhanceFissuresInImage]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]]    <small>(scripted, built-in)</small>
+
* [http://www.chestimagingplatform.org EvaluateLungLobeSegmentationResults]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* label Toggle Bug2049
+
* [http://www.chestimagingplatform.org ExecuteSystemCommand]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Modules/LandmarkRegistration|Landmark Registration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
+
* [[Documentation/Nightly/Extensions/SlicerRT|ExternalBeamPlanning]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
* [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
+
* [http://www.chestimagingplatform.org ExtractChestLabelMap]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
+
* [http://www.chestimagingplatform.org ExtractFissureBoundaryFromLobeMap]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Modules/MultiVolumeImporter|Multi Volume Importer]]   <small>(scripted, built-in)</small>
+
* [http://www.chestimagingplatform.org ExtractParticlesFromChestRegionChestType]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* Performance Tests
+
* [[Documentation/Nightly/Modules/ExtractSkeleton|ExtractSkeleton]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Extensions/Reporting|Reporting]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/Reporting|Reporting]] extension)</small>
+
* [[Documentation/Nightly/Modules/FastGrowCut|FastGrowCut]]    <small>(loadable, bundled in [[Documentation/4.3/Modules/FastGrowCut|FastGrowCutEffect]] extension)</small>
* RSNA2012Prostate Demo
+
* [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|FastGrowCutSegmenter]]    <small>(loadable, bundled in [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|CarreraSlice]] extension)</small>
* RSNAQuant Tutorial
+
* [[Documentation/Nightly/Modules/FiberBundleLabelSelect|FiberBundleLabelSelect]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|SlicerDMRI]] extension)</small>
* RSNAVis Tutorial
+
* [[Documentation/Nightly/Modules/FiberBundleToLabelMap|FiberBundleToLabelMap]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|SlicerDMRI]] extension)</small>
* [[Documentation/Nightly/Modules/SampleData|Sample Data]]    <small>(scripted, built-in)</small>
+
* [[Documentation/Nightly/Modules/FiberTractMeasurements|FiberTractMeasurements]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|SlicerDMRI]] extension)</small>
* scene Import2428
+
* [[Documentation/Nightly/Modules/FiducialRegistration|FiducialRegistration]]    <small>(cli, built-in)</small>
* Self Tests
+
* [[Documentation/Nightly/Extensions/SlicerIGT|FiducialRegistrationWizard]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
* [[Documentation/Nightly/Modules/SimpleFilters|Simple Filters]]    <small>(scripted, built-in)</small>
+
* [[Documentation/Nightly/Extensions/SlicerIGT|FiducialsToModelRegistration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
* slicer Close Crash Bug2590
+
* [[Documentation/Nightly/Modules/FilmDosimetry|FilmDosimetryAnalysis]]    <small>(scripted, bundled in [[Documentation/Nightly/Modules/FilmDosimetry|FilmDosimetryAnalysis]] extension)</small>
* Slicer MRBTest
+
* [http://www.chestimagingplatform.org FilterAirwayParticleData]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small>
+
* [http://www.chestimagingplatform.org FilterConnectedComponents]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* Threshold Threading Test
+
* [http://www.chestimagingplatform.org FilterFissureParticleData]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Modules/VectorToScalarVolume|Vector To Scalar Volume]]    <small>(scripted, built-in)</small>
+
* [http://www.chestimagingplatform.org FilterVesselParticleData]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
+
* [http://www.chestimagingplatform.org FindPatchMatch]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
+
* [http://www.chestimagingplatform.org FitLobeSurfaceModelsToParticleData]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Modules/Volumes|Volumes]]   <small>(loadable, built-in)</small>
+
* [[Documentation/Nightly/Modules/GaussianBlurImageFilter|GaussianBlurImageFilter]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Extensions/XNATSlicer|Xnat Slicer]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] extension)</small>
+
* [[Documentation/Nightly/Modules/GelDosimetry|GelDosimetryAnalysis]]    <small>(scripted, bundled in [[Documentation/Nightly/Modules/GelDosimetry|GelDosimetryAnalysis]] extension)</small>
== Sunil Kumar ==
+
* [[Documentation/Nightly/Modules/GelDosimetry|GelDosimetryAnalysisAlgo]]    <small>(loadable, bundled in [[Documentation/Nightly/Modules/GelDosimetry|GelDosimetryAnalysis]] extension)</small>
* [[Documentation/Nightly/Extensions/XNATSlicer|Xnat Slicer]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] extension)</small>
+
* [http://www.chestimagingplatform.org GenerateAtlasConvexHull]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
== Sylvain Bouix ==
+
* [http://www.chestimagingplatform.org GenerateBinaryThinning3D]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
+
* [http://www.chestimagingplatform.org GenerateDistanceMapFromLabelMap]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
== Sylvain Gouttard ==
+
* [http://www.chestimagingplatform.org GenerateImageSubVolumes]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
+
* [http://www.chestimagingplatform.org GenerateLesionSegmentation]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
== T ==
+
* [http://www.chestimagingplatform.org GenerateLobeSurfaceModels]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* Dicom Rt Import Export Plugin
+
* [http://www.chestimagingplatform.org GenerateMedianFilteredImage]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
== t ==
+
* [http://www.chestimagingplatform.org GenerateModel]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* Dicom Rt Import Export Plugin
+
* [http://www.chestimagingplatform.org GenerateNLMFilteredImage]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
== Tamas Ungi ==
+
* [http://www.chestimagingplatform.org GenerateOtsuLungCast]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Extensions/SlicerIGT|Breach Warning]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
+
* [http://www.chestimagingplatform.org GenerateOverlayImages]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* Breach Warning Self Test
+
* [http://www.chestimagingplatform.org GenerateParenchymaPhenotypes]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Modules/CollectFiducials|Collect Fiducials]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
+
* [http://www.chestimagingplatform.org GeneratePartialLungLabelMap]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Extensions/SlicerIGT|Create Models]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
+
* [http://www.chestimagingplatform.org GenerateSimpleLungMask]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Extensions/SlicerIGT|Fiducial Registration Wizard]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
+
* [http://www.chestimagingplatform.org GenerateStenciledLabelMapFromParticles]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Extensions/SlicerIGT|Fiducials To Model Registration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
+
* [http://www.chestimagingplatform.org GetStructuresInLabelMap]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Modules/OpenIGTLinkRemote|Open IGTLink Remote]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
+
* [http://www.chestimagingplatform.org GetTransformationKappa]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Modules/PerkEvaluator|Perk Evaluator]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small>
+
* [http://www.chestimagingplatform.org GetTransformationKappa2D]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Extensions/SlicerIGT|Pivot Calibration]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
+
* [http://www.chestimagingplatform.org GetTransformationSimilarityMetric]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Modules/PlusRemote|Plus Remote]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
+
* [[Documentation/Nightly/Modules/GradientAnisotropicDiffusion|GradientAnisotropicDiffusion]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Extensions/PerkTutor|Python Metrics Calculator]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small>
+
* [http://publish.uwo.ca/~dchen285/GraphCutSegment/GraphCutSegment.html GraphCutInteractiveSegmenter]    <small>(loadable, bundled in [http://publish.uwo.ca/~dchen285/GraphCutSegment/GraphCutSegment.html GraphCutSegment] extension)</small>
* [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis Monitoring]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis]] extension)</small>
+
* [http://www.chestimagingplatform.org GraphCutsOptimization]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis]] extension)</small>
+
* [[Documentation/Nightly/Modules/GrayscaleFillHoleImageFilter|GrayscaleFillHoleImageFilter]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Extensions/SlicerIGT|Transform Fusion]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
+
* [[Documentation/Nightly/Modules/GrayscaleGrindPeakImageFilter|GrayscaleGrindPeakImageFilter]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/TransformRecorder|Transform Recorder]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small>
+
* [[Documentation/Nightly/Modules/GrayscaleModelMaker|GrayscaleModelMaker]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Extensions/SlicerIGT|Ultrasound Snapshots]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Modules/VolumeResliceDriver|Volume Reslice Driver]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Modules/WorkflowSegmentation|Workflow Segmentation]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
== the University of North Carolina at Chapel Hill ==
 
* [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small>
 
== Tina Kapur ==
 
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
== Tobias Penzkofer ==
 
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/iGyne|i Gyne]] extension)</small>
 
== Tohru Tani ==
 
* [[Documentation/Nightly/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
== u ==
 
* Dicom Rt Import Export Plugin
 
== U ==
 
* Dicom Rt Import Export Plugin
 
== UNC Medical School ==
 
* [[Documentation/Nightly/Extensions/CMFreg|Apply Matrix]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/LabelAddition|Label Addition]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/LabelExtraction|Label Extraction]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
== UofM School Of Dentistry ==
 
* [[Documentation/Nightly/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
== UofM School of Dentistry ==
 
* [[Documentation/Nightly/Extensions/CMFreg|Apply Matrix]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/LabelAddition|Label Addition]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/LabelExtraction|Label Extraction]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
== v ==
 
* Dicom Rt Import Export Plugin
 
== Vince Magnotta ==
 
* DWIConvert    <small>(cli, built-in)</small>
 
== Vincent A. Magnotta ==
 
* BRAINSLabel Stats    <small>(cli, built-in)</small>
 
== Vincent Magnotta ==
 
* [[Documentation/Nightly/Modules/BRAINSResample|BRAINSResample]]    <small>(cli, built-in)</small>
 
== Vinicius Boen ==
 
* [[Documentation/Nightly/Extensions/CMFreg|Apply Matrix]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/LabelAddition|Label Addition]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/LabelExtraction|Label Extraction]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Extensions/CMFreg|Surface Registration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
== Vivek Narayan ==
 
* [[Documentation/Nightly/Modules/HeterogeneityCAD|Heterogeneity CAD]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] extension)</small>
 
* [[Documentation/Nightly/Modules/SegmentCAD|Segment CAD]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] extension)</small>
 
== W ==
 
* Dicom Rt Import Export Plugin
 
== Wendy Plesniak ==
 
* [[Documentation/Nightly/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/Nightly/Modules/SceneViews|Scene Views]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
* [[Documentation/Nightly/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/Welcome|Welcome]]    <small>(loadable, built-in)</small>
 
== Xiaodong Tao ==
 
* DWIConvert    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ModelToLabelMap|Model To Label Map]]    <small>(cli, built-in)</small>
 
== Xiaofeng Liu ==
 
* [[Documentation/Nightly/Extensions/MABMIS|IGR3D MABMIS Testing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] extension)</small>
 
* [[Documentation/Nightly/Extensions/MABMIS|IGR3D MABMIS Training]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] extension)</small>
 
== Xiaojun Chen ==
 
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/iGyne|i Gyne]] extension)</small>
 
== y Wells ==
 
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
== Yanling Liu ==
 
* [[Documentation/Nightly/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
 
== Yi Gao ==
 
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/Nightly/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
* [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
* [[Documentation/Nightly/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
== Yinglin Lee ==
 
* Test Grid Transform Registration    <small>(cli, built-in)</small>
 
== Yingxuan Zhu ==
 
* [[Documentation/Nightly/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PkModeling|Pk Modeling]] extension)</small>
 
== Yinpeng Li ==
 
* [[Documentation/Nightly/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* [[Documentation/Nightly/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
== Yixun Liu ==
 
* [[Documentation/Nightly/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/Nightly/Modules/MeshCompression|Mesh Compression]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/Nightly/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] extension)</small>
 
== Yogesh Rathi ==
 
* [[Documentation/Nightly/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* [[Documentation/Nightly/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
== Yong Zhang ==
 
* [[Documentation/Nightly/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 
== Yumin Yuan ==
 
* EMSegment Command Line    <small>(cli, built-in)</small>
 
== Yundi Shi ==
 
* [[Documentation/Nightly/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/Nightly/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
= Modules by type =
 
3 types:
 
* [[#cli|cli]]
 
* [[#loadable|loadable]]
 
* [[#scripted|scripted]]
 
== cli ==
 
* [http://www.nitrc.org/projects/abc ABC]    <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small>
 
* [[Documentation/Nightly/Modules/ACPCTransform|ACPCTransform]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/AddScalarVolumes|Add Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Extensions/AirwaySegmentation|Airway Segmentation CLI]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/AirwaySegmentation|Airway Segmentation]] extension)</small>
 
* [[Documentation/Nightly/Extensions/CMFreg|Apply Matrix]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Extensions/IASEM|Bin Shrink]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/Nightly/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/Nightly/Modules/BRAINSDemonWarp|BRAINSDemon Warp]]    <small>(cli, built-in)</small>
 
* BRAINSDWICleanup    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/BRAINSFit|BRAINSFit]]    <small>(cli, built-in)</small>
 
* BRAINSLabel Stats    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/BRAINSResample|BRAINSResample]]    <small>(cli, built-in)</small>
 
* BRAINSResize    <small>(cli, built-in)</small>
 
* BRAINSROIAuto    <small>(cli, built-in)</small>
 
* BRAINSStrip Rotation    <small>(cli, built-in)</small>
 
* BRAINSTransform Convert    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/BSplineToDeformationField|BSpline To Deformation Field]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/CastScalarVolume|Cast Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/CheckerBoardFilter|Checker Board Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Extensions/CleaverExtension|Cleaver CLI]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CleaverExtension|Cleaver Extension]] extension)</small>
 
* CLIROITest    <small>(cli, built-in)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Boolean REMOVEFilter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Connected Threshold Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Isolated Connected Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/Nightly/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* [[Documentation/Nightly/Modules/CreateDICOMSeries|Create DICOMSeries]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/DiffusionTensorScalarMeasurements|Diffusion Tensor Scalar Measurements]]    <small>(cli, built-in)</small>
 
* Diffusion Tensor Test    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Extensions/ErodeDilateLabel|Dilate Label]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
 
* [[Documentation/Nightly/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* DTIexport    <small>(cli, built-in)</small>
 
* DTIimport    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* DWIConvert    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/DWIToDTIEstimation|DWITo DTIEstimation]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/DWIUnbiasedNonLocalMeansFilter|DWIUnbiased Non Local Means Filter]]    <small>(cli, built-in)</small>
 
* EMSegment Command Line    <small>(cli, built-in)</small>
 
* EMSegment Transform To New Format    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Label]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
 
* [[Documentation/Nightly/Modules/ExecutionModelTour|Execution Model Tour]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ExpertAutomatedRegistration|Expert Automated Registration]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli, built-in)</small>
 
* Fiber Bundle Label Select    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|Fiber Compare]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* Fiber Tract Measurements    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/FiducialRegistration|Fiducial Registration]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/Nightly/Modules/FinslerTractography|Finsler Tractography]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/Nightly/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/GrayscaleGrindPeakImageFilter|Grayscale Grind Peak Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/GrayscaleModelMaker|Grayscale Model Maker]]    <small>(cli, built-in)</small>
 
 
* [[Documentation/Nightly/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
* [[Documentation/Nightly/Modules/HistogramMatching|Histogram Matching]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/GyroGuide|GyroGuide]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/GyroGuide|GyroGuide]] extension)</small>
 +
* [[Documentation/Nightly/Modules/HeterogeneityCAD|HeterogeneityCAD]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|OpenCAD]] extension)</small>
 +
* [[Documentation/Nightly/Modules/HistogramMatching|HistogramMatching]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Extensions/IASEM|IASEMImport]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/Nightly/Extensions/IASEM|IASEMImport]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
* [[Documentation/Nightly/Extensions/IASEM|IASEMImport Series]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
+
* [[Documentation/Nightly/Extensions/IASEM|IASEMImportSeries]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
* [[Documentation/Nightly/Extensions/MABMIS|IGR3D MABMIS Testing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] extension)</small>
+
* [[Documentation/Nightly/Extensions/iGyne|iGyne]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/iGyne|iGyne]] extension)</small>
* [[Documentation/Nightly/Extensions/MABMIS|IGR3D MABMIS Training]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] extension)</small>
+
* [[Documentation/Nightly/Modules/ImageLabelCombine|ImageLabelCombine]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/ImageLabelCombine|Image Label Combine]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/IntensityDifferenceMetric|IntensityDifferenceMetric]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/ChangeTracker|ChangeTracker]] extension)</small>
* [[Documentation/Nightly/Modules/ImageMaker|Image Maker]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/ImageMaker|Image Maker]] extension)</small>
+
* [[Documentation/Nightly/Extensions/IntensitySegmenter|IntensitySegmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IntensitySegmenter|IntensitySegmenter]] extension)</small>
* [[Documentation/Nightly/Modules/IntensityDifferenceMetric|Intensity Difference Metric]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] extension)</small>
+
* IslandRemoval    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small>
+
* [[Documentation/Nightly/Modules/Isodose|Isodose]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
* [[Documentation/Nightly/Modules/LabelAddition|Label Addition]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
+
* [[Documentation/Nightly/Extensions/DCMQI|itkimage2paramap]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DCMQI|DCMQI]] extension)</small>
* [[Documentation/Nightly/Modules/LabelExtraction|Label Extraction]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
+
* [[Documentation/Nightly/Extensions/DCMQI|itkimage2segimage]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DCMQI|DCMQI]] extension)</small>
* [[Documentation/Nightly/Modules/LabelMapSmoothing|Label Map Smoothing]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|KUtil]]    <small>(scripted, bundled in [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|CarreraSlice]] extension)</small>
* [[Documentation/Nightly/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
+
* [[Documentation/Nightly/Modules/LabelAddition|LabelAddition]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
* [[Documentation/Nightly/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
+
* [[Documentation/Nightly/Modules/LabelExtraction|LabelExtraction]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
* [[Documentation/Nightly/Modules/MaskScalarVolume|Mask Scalar Volume]]    <small>(cli, built-in)</small>
+
* [http://www.chestimagingplatform.org LabelMapFromRegionAndTypePoints]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Modules/MatlabCommander|Matlab Commander]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
+
* [[Documentation/Nightly/Modules/LabelMapSmoothing|LabelMapSmoothing]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/MedianImageFilter|Median Image Filter]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Extensions/IASEM|LabelObjectStatistics]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
* [[Documentation/Nightly/Modules/MergeModels|Merge Models]]   <small>(cli, built-in)</small>
+
* [http://www.chestimagingplatform.org LabelParticlesByChestRegionChestType]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|Merge Stat With Fiber]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
+
* [[Documentation/Nightly/Modules/LabelStatistics|LabelStatistics]]    <small>(scripted, built-in)</small>
* [[Documentation/Nightly/Modules/MeshCompression|Mesh Compression]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
+
* [[Documentation/Nightly/Modules/LandmarkRegistration|LandmarkRegistration]]    <small>(scripted, built-in)</small>
* [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]] extension)</small>
+
* [[Documentation/Nightly/Modules/LAScarSegmenter|LAScarSegmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScarSegmenter]] extension)</small>
* [[Documentation/Nightly/Modules/ModelMaker|Model Maker]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/LASegmentationWorkflow|LASegmentationWorkflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac_MRI_Toolkit] extension)</small>
* [[Documentation/Nightly/Modules/ModelToLabelMap|Model To Label Map]]   <small>(cli, built-in)</small>
+
* [http://slicer.vmtk.org/ LevelSetSegmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
* [[Documentation/Nightly/Modules/MultiplyScalarVolumes|Multiply Scalar Volumes]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Extensions/MarginCalculator|MarginCalculator]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/MarginCalculator|MarginCalculator]] extension)</small>
* [[Documentation/Nightly/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/OrientScalarVolume|Orient Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/OtsuThresholdImageFilter|Otsu Threshold Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] extension)</small>
 
* Perform Metric Test    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/Nightly/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PkModeling|Pk Modeling]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|plastimatch slicer bspline]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|plastimatch slicer dicomrt export]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|plastimatch slicer dicomrt import]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|plastimatch slicer landwarp]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|plastimatch slicer xformwarp]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/ProbeVolumeWithModel|Probe Volume With Model]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ResampleDTIVolume|Resample DTIVolume]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ResampleScalarVectorDWIVolume|Resample Scalar Vector DWIVolume]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ResampleScalarVolume|Resample Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
* [[Documentation/Nightly/Modules/SimpleRegionGrowingSegmentation|Simple Region Growing Segmentation]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/SobolevSegmenter|Sobolev Segmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SobolevSegmenter|Sobolev Segmenter]] extension)</small>
 
* [[Documentation/Nightly/Extensions/IASEM|Spacing Aware Curvature Diffusion]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/Nightly/Modules/SubtractScalarVolumes|Subtract Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
* [[Documentation/Nightly/Modules/SwissSkullStripper|Swiss Skull Stripper]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]] extension)</small>
 
* Test Grid Transform Registration    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ThresholdScalarVolume|Threshold Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* VBRAINSDemon Warp    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/VotingBinaryHoleFillingImageFilter|Voting Binary Hole Filling Image Filter]]    <small>(cli, built-in)</small>
 
== loadable ==
 
* [[Documentation/Nightly/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|Beams]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Breach Warning]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Modules/Cameras|Cameras]]    <small>(loadable, built-in)</small>
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
* [[Documentation/Nightly/Modules/CollectFiducials|Collect Fiducials]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Modules/Colors|Colors]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/ContourComparison|Contour Comparison]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/ContourMorphology|Contour Morphology]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/Contours|Contours]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Create Models]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Modules/CropVolume|Crop Volume]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/Data|Data]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/DataStore|Data Store]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/DiceComputation|Dice Computation]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/DiceComputation|Dice Computation]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|Dicom Rt Import Export]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/DicomSroImport|Dicom Sro Import]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/DoseAccumulation|Dose Accumulation]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/DoseComparison|Dose Comparison]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/DoseVolumeHistogram|Dose Volume Histogram]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* Double Arrays    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/EMSegment|EMSegment]]    <small>(loadable, built-in)</small>
 
* EMSegment Quick    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/FastGrowCut|Fast Grow Cut]]    <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small>
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Fiducial Registration Wizard]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo]    <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
* [[Documentation/Nightly/Modules/Isodose|Isodose]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/LightWeightRobotIGT|Light Weight Robot IGT]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/LightWeightRobotIGT|Light Weight Robot IGT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
 
* [[Documentation/Nightly/Modules/Markups|Markups]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/Markups|Markups]]    <small>(loadable, built-in)</small>
* [[Documentation/Nightly/Modules/MatlabModuleGenerator|Matlab Module Generator]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
+
* [[Documentation/Nightly/Extensions/SlicerIGT|MarkupsToModel]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
* [[Documentation/Nightly/Extensions/MultidimData|Metafile Importer]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small>
+
* [[Documentation/Nightly/Modules/MaskCreation|MaskCreation]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 +
* [http://www.chestimagingplatform.org MaskOutLabelMapStructures]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [[Documentation/Nightly/Modules/MaskScalarVolume|MaskScalarVolume]]    <small>(cli, built-in)</small>
 +
* [[Documentation/Nightly/Modules/MedianImageFilter|MedianImageFilter]]    <small>(cli, built-in)</small>
 +
* [http://www.chestimagingplatform.org MergeChestLabelMaps]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [[Documentation/Nightly/Modules/MergeModels|MergeModels]]    <small>(cli, built-in)</small>
 +
* [http://www.chestimagingplatform.org MergeParticleDataSets]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [[Documentation/Nightly/Modules/MeshStatistics|MeshStatistics]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/MeshStatistics|MeshStatisticsExtension]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/MeshToLabelMap|MeshToLabelMap]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/MeshToLabelMap|MeshToLabelMap]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/Sequences|MetafileImporter]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/Sequences|Sequences]] extension)</small>
 +
* [[Documentation/Nightly/Modules/ModelMaker|ModelMaker]]    <small>(cli, built-in)</small>
 +
* [[Documentation/Nightly/Extensions/SlicerIGT|ModelRegistration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
 
* [[Documentation/Nightly/Modules/Models|Models]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/Models|Models]]    <small>(loadable, built-in)</small>
* [[Documentation/Nightly/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
+
* [[Documentation/Nightly/Modules/ModelToLabelMap|ModelToLabelMap]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/OpenIGTLinkIF|Open IGTLink IF]]    <small>(loadable, built-in)</small>
+
* [[Documentation/Nightly/Extensions/ModelToModelDistance|ModelToModelDistance]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/ModelToModelDistance|ModelToModelDistance]] extension)</small>
* [[Documentation/Nightly/Modules/OpenIGTLinkRemote|Open IGTLink Remote]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
+
* [[Documentation/Nightly/Extensions/mpReview|mpReview]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/mpReview|mpReview]] extension)</small>
* [[Documentation/Nightly/Modules/PathExplorer|Path Explorer]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
+
* [[Documentation/Nightly/Extensions/mpReview|mpReviewPreprocessor]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/mpReview|mpReview]] extension)</small>
* [[Documentation/Nightly/Modules/PerkEvaluator|Perk Evaluator]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small>
+
* [[Documentation/Nightly/Modules/MultiplyScalarVolumes|MultiplyScalarVolumes]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Extensions/SlicerIGT|Pivot Calibration]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
+
* [[Documentation/Nightly/Modules/MultiVolumeExplorer|MultiVolumeExplorer]]    <small>(loadable, built-in)</small>
* [[Documentation/Nightly/Extensions/SlicerRT|Planar Image]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
+
* [[Documentation/Nightly/Modules/MultiVolumeImporter|MultiVolumeImporter]]    <small>(scripted, built-in)</small>
* [[Documentation/Nightly/Extensions/SlicerRT|Plastimatch Py]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
+
* [[Documentation/Nightly/Modules/N4ITKBiasFieldCorrection|N4ITKBiasFieldCorrection]]    <small>(cli, built-in)</small>
 +
* [[Documentation/Nightly/Extensions/NeedleFinder|NeedleFinder]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/NeedleFinder|NeedleFinder]] extension)</small>
 +
* [[Documentation/Nightly/Modules/NonGrowing|NonGrowing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/SlicerOpenCV|OpenCV]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerOpenCV|SlicerOpenCV]] extension)</small>
 +
* [[Documentation/Nightly/Modules/OpenIGTLinkIF|OpenIGTLinkIF]]    <small>(loadable, built-in)</small>
 +
* [[Documentation/Nightly/Modules/OpenIGTLinkRemote|OpenIGTLinkRemote]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
 +
* [[Documentation/Nightly/Modules/OrientScalarVolume|OrientScalarVolume]]    <small>(cli, built-in)</small>
 +
* [[Documentation/Nightly/Extensions/DCMQI|paramap2itkimage]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DCMQI|DCMQI]] extension)</small>
 +
* [http://www.chestimagingplatform.org ParticlesDisplay]    <small>(loadable, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [[Documentation/Nightly/Modules/PathExplorer|PathExplorer]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] extension)</small>
 +
* PerformMetricTest    <small>(cli, built-in)</small>
 +
* [http://www.chestimagingplatform.org PerformMorphological]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [[Documentation/Nightly/Modules/PerkEvaluator|PerkEvaluator]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|PerkTutor]] extension)</small>
 +
* [http://www.chestimagingplatform.org PerturbParticles]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [[Documentation/Nightly/Extensions/PET-IndiC|PETIndiC]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PET-IndiC|PET-IndiC]] extension)</small>
 +
* [[Documentation/Nightly/Modules/PETLiverUptakeMeasurement|PETLiverUptakeMeasurement]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PETLiverUptakeMeasurement|PETLiverUptakeMeasurement]] extension)</small>
 +
* [[Documentation/Nightly/Modules/PETStandardUptakeValueComputation|PETStandardUptakeValueComputation]]    <small>(cli, built-in)</small>
 +
* [[Documentation/Nightly/Extensions/LongitudinalPETCT|PETSUVImageMaker]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|LongitudinalPETCT]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/PETTumorSegmentation|PETTumorSegmentation]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PETTumorSegmentation|PETTumorSegmentation]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/SlicerHeart|Philips4dUsDicomPatcher]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerHeart|SlicerHeart]] extension)</small>
 +
* [[Documentation/Nightly/Modules/PickAndPaint|PickAndPaint]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PickAndPaint|PickAndPaintExtension]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/SlicerIGT|PivotCalibration]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
 +
* [[Documentation/Nightly/Modules/PkModeling|PkModeling]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PkModeling|PkModeling]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/SlicerRT|PlanarImage]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/SlicerRT|plastimatch_slicer_bspline]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/SlicerRT|plastimatch_slicer_landwarp]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/SlicerRT|PlastimatchPy]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/SlicerRT|PlmRegister]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/SlicerIGT|PlusModelCatalogBrowser]]   <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
 +
* [[Documentation/Nightly/Modules/PlusRemote|PlusRemote]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
 +
* [[Documentation/Nightly/Modules/ProbeVolumeWithModel|ProbeVolumeWithModel]]    <small>(cli, built-in)</small>
 +
* [[Documentation/Nightly/Extensions/PerkTutor|PythonMetricsCalculator]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PerkTutor|PerkTutor]] extension)</small>
 +
* [[Documentation/Nightly/Modules/Q3DC|Q3DC]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/Q3DC|Q3DC]] extension)</small>
 +
* [[Documentation/Nightly/Modules/QuadEdgeSurfaceMesher|QuadEdgeSurfaceMesher]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerProstate|SlicerProstate]] extension)</small>
 +
* [http://www.chestimagingplatform.org QualityControl]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [[Documentation/Nightly/Modules/QuantitativeIndicesCLI|QuantitativeIndicesCLI]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PET-IndiC|PET-IndiC]] extension)</small>
 +
* [[Documentation/Nightly/Modules/QuantitativeIndicesTool|QuantitativeIndicesTool]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PET-IndiC|PET-IndiC]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/QuantitativeReporting|QuantitativeReporting]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/QuantitativeReporting|QuantitativeReporting]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/SlicerPathology|QuickTCGA]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerPathology|SlicerPathology]] extension)</small>
 +
* [http://www.chestimagingplatform.org ReadDicomWriteTags]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org ReadNRRDsWriteVTK]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org ReadVidaWriteCIP]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org ReadVTKWriteNRRDs]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org ReadWriteImageData]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org ReadWriteRegionAndTypePoints]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
 
* [[Documentation/Nightly/Modules/Reformat|Reformat]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/Reformat|Reformat]]    <small>(loadable, built-in)</small>
* [[Documentation/Nightly/Extensions/Reporting|Reporting]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/Reporting|Reporting]] extension)</small>
+
* [http://www.chestimagingplatform.org RegionType]    <small>(loadable, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Modules/SceneViews|Scene Views]]    <small>(loadable, built-in)</small>
+
* [http://www.chestimagingplatform.org RegionTypeLocationsToROIVolume]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Extensions/MultidimData|Sequence Browser]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small>
+
* [http://www.chestimagingplatform.org RegisterCT]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Extensions/MultidimData|Sequences]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small>
+
* [http://www.chestimagingplatform.org RegisterLabelMaps]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Modules/SubjectHierarchy|Subject Hierarchy]]    <small>(loadable, built-in)</small>
+
* [http://www.chestimagingplatform.org RegisterLungAtlas]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Modules/TrackerStabilizer|Tracker Stabilizer]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small>
+
* [http://www.chestimagingplatform.org RemapLabelMap]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Modules/TractographyDisplay|Tractography Display]]    <small>(loadable, built-in)</small>
+
* [http://www.chestimagingplatform.org RemoveChestTypeFromLabelMapUsingParticles]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* Tractography Interactive Seeding   <small>(loadable, built-in)</small>
+
* [http://www.chestimagingplatform.org RemoveParticlesFromParticlesDataSet]   <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Extensions/SlicerIGT|Transform Fusion]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
+
* [http://www.chestimagingplatform.org ResampleCT]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Modules/TransformRecorder|Transform Recorder]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small>
+
* [[Documentation/Nightly/Extensions/ResampleDTIlogEuclidean|ResampleDTIlogEuclidean]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/ResampleDTIlogEuclidean|ResampleDTIlogEuclidean]] extension)</small>
* [[Documentation/Nightly/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
+
* [[Documentation/Nightly/Modules/ResampleDTIVolume|ResampleDTIVolume]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Extensions/SlicerIGT|Ultrasound Snapshots]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
+
* [http://www.chestimagingplatform.org ResampleLabelMap]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Modules/Units|Units]]    <small>(loadable, built-in)</small>
+
* [[Documentation/Nightly/Modules/ResampleScalarVectorDWIVolume|ResampleScalarVectorDWIVolume]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Extensions/SlicerRT|Vff File Reader]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
+
* [http://www.chestimagingplatform.org RescaleLabelMap]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
+
* [[Documentation/Nightly/Modules/ResectionVolume|ResectionVolume]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ResectionPlanner|ResectionPlanner]] extension)</small>
* [[Documentation/Nightly/Modules/VolumeRendering|Volume Rendering]]   <small>(loadable, built-in)</small>
+
* [[Documentation/Nightly/Modules/ROBEXBrainExtraction|ROBEXBrainExtraction]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/ROBEXBrainExtraction|ROBEXBrainExtraction]] extension)</small>
* [[Documentation/Nightly/Modules/VolumeResliceDriver|Volume Reslice Driver]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
+
* [[Documentation/Nightly/Modules/RobustStatisticsSegmenter|RobustStatisticsSegmenter]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/Volumes|Volumes]]    <small>(loadable, built-in)</small>
+
* [[Documentation/Nightly/Modules/SampleData|SampleData]]    <small>(scripted, built-in)</small>
* [[Documentation/Nightly/Modules/Welcome|Welcome]]    <small>(loadable, built-in)</small>
+
* [https://kitwaremedical.github.io/SlicerITKUltrasoundDoc/ ScanConvertCurvilinearArray]    <small>(cli, bundled in [https://kitwaremedical.github.io/SlicerITKUltrasoundDoc/ SlicerITKUltrasound] extension)</small>
* [[Documentation/Nightly/Modules/WorkflowSegmentation|Workflow Segmentation]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small>
+
* [https://kitwaremedical.github.io/SlicerITKUltrasoundDoc/ ScanConvertPhasedArray3D]    <small>(cli, bundled in [https://kitwaremedical.github.io/SlicerITKUltrasoundDoc/ SlicerITKUltrasound] extension)</small>
== scripted ==
+
* [https://kitwaremedical.github.io/SlicerITKUltrasoundDoc/ ScanConvertSliceSeries]    <small>(cli, bundled in [https://kitwaremedical.github.io/SlicerITKUltrasoundDoc/ SlicerITKUltrasound] extension)</small>
* [[Documentation/Nightly/Modules/AirwaySegmentation|Airway Segmentation]]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation] extension)</small>
+
* [[Documentation/Nightly/Modules/ScarVisualization|ScarVisualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac_MRI_Toolkit] extension)</small>
* [[Documentation/Nightly/Extensions/SlicerRT|Batch Contour Conversion]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
+
* [[Documentation/Nightly/Extensions/ScatteredTransform|ScatteredTransform]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/ScatteredTransform|ScatteredTransform]] extension)</small>
* [[Documentation/Nightly/Extensions/IASEM|Binary Watershed Effect]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
+
* [[Documentation/Nightly/Modules/SceneViews|SceneViews]]    <small>(loadable, built-in)</small>
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures]    <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] extension)</small>
+
* [[Documentation/Nightly/Modules/ScreenCapture|ScreenCapture]]    <small>(scripted, built-in)</small>
* [http://slicer.vmtk.org/ Centerline Computation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
+
* [[Documentation/Nightly/Modules/SEG2NRRD|SEG2NRRD]]    <small>(cli)</small>
* [[Documentation/Nightly/Modules/ChangeTracker|Change Tracker]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] extension)</small>
+
* [[Documentation/Nightly/Extensions/DCMQI|segimage2itkimage]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DCMQI|DCMQI]] extension)</small>
* Charting   <small>(scripted, built-in)</small>
+
* [[Documentation/Nightly/Modules/Segmentations|Segmentations]]    <small>(loadable, built-in)</small>
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
+
* [[Documentation/Nightly/Modules/SegmentationSmoothing|SegmentationSmoothing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerProstate|SlicerProstate]] extension)</small>
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
+
* [[Documentation/Nightly/Modules/SegmentCAD|SegmentCAD]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|OpenCAD]] extension)</small>
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
+
* [[Documentation/Nightly/Modules/SegmentComparison|SegmentComparison]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
* [[Documentation/Nightly/Modules/CompareVolumes|Compare Volumes]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
+
* [[Documentation/Nightly/Modules/SegmentEditor|SegmentEditor]]    <small>(scripted, built-in)</small>
* [[Documentation/Nightly/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
+
* [https://github.com/lassoan/SlicerSegmentEditorExtraEffects SegmentEditorFastMarching]    <small>(scripted, bundled in [https://github.com/lassoan/SlicerSegmentEditorExtraEffects SegmentEditorExtraEffects] extension)</small>
* [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]] extension)</small>
+
* [https://github.com/lassoan/SlicerSegmentEditorExtraEffects SegmentEditorFloodFilling]    <small>(scripted, bundled in [https://github.com/lassoan/SlicerSegmentEditorExtraEffects SegmentEditorExtraEffects] extension)</small>
* [[Documentation/Nightly/Modules/DataProbe|Data Probe]]    <small>(scripted, built-in)</small>
+
* [https://github.com/lassoan/SlicerSegmentEditorExtraEffects SegmentEditorWatershed]   <small>(scripted, bundled in [https://github.com/lassoan/SlicerSegmentEditorExtraEffects SegmentEditorExtraEffects] extension)</small>
* [[Documentation/Nightly/Modules/DICOM|DICOM]]    <small>(scripted, built-in)</small>
+
* [http://www.chestimagingplatform.org SegmentLungAirways]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* DICOM2Full Brain Tractography   <small>(scripted, built-in)</small>
+
* [http://www.chestimagingplatform.org SegmentLungLobes]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Modules/DicomSroExport|Dicom Sro Export]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
+
* [[Documentation/Nightly/Modules/SegmentMorphology|SegmentMorphology]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
* [[Documentation/Nightly/Extensions/IASEM|Double Threshold Effect]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
+
* SegmentStatistics   <small>(scripted, built-in)</small>
* [[Documentation/Nightly/Extensions/SlicerRT|Dvh Comparison]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
+
* [[Documentation/Nightly/Extensions/Sequences|SequenceBrowser]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/Sequences|Sequences]] extension)</small>
* [[Documentation/Nightly/Modules/Endoscopy|Endoscopy]]   <small>(scripted, built-in)</small>
+
* [[Documentation/Nightly/Extensions/Sequences|Sequences]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/Sequences|Sequences]] extension)</small>
* [[Documentation/Nightly/Modules/ExtensionWizard|Extension Wizard]]    <small>(scripted, built-in)</small>
+
* [[Documentation/Nightly/Modules/ShapeQuantifier|ShapeQuantifier]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ShapeQuantifier|ShapeQuantifier]] extension)</small>
* [[Documentation/Nightly/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]]   <small>(scripted, built-in)</small>
+
* [[Documentation/Nightly/Extensions/ShapeQuantifier|ShapeQuantifierCore]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ShapeQuantifier|ShapeQuantifier]] extension)</small>
* [[Documentation/Nightly/Extensions/SlicerIGT|Fiducials To Model Registration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
+
* [[Documentation/Nightly/Extensions/SlicerPathology|ShortCutCore]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerPathology|SlicerPathology]] extension)</small>
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
+
* [[Documentation/Nightly/Modules/SimpleFilters|SimpleFilters]]    <small>(scripted, built-in)</small>
* [[Documentation/Nightly/Modules/GyroGuide|Gyro Guide]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] extension)</small>
+
* [[Documentation/Nightly/Modules/SimpleRegionGrowingSegmentation|SimpleRegionGrowingSegmentation]]   <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/HeterogeneityCAD|Heterogeneity CAD]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] extension)</small>
+
* [[Documentation/Nightly/Modules/SkullStripper|SkullStripper]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SkullStripper|SkullStripper]] extension)</small>
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/iGyne|i Gyne]] extension)</small>
+
* [[Documentation/Nightly/Modules/SlicerAstroDataProbe|SlicerAstroDataProbe]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerAstro|SlicerAstro]] extension)</small>
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter KUtil]    <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
+
* [[Documentation/Nightly/Extensions/SlicerPathology|SlicerPathology]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerPathology|SlicerPathology]] extension)</small>
* [[Documentation/Nightly/Extensions/IASEM|Label Object Statistics]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
+
* [[Documentation/Nightly/Modules/SlicerToKiwiExporter|SlicerToKiwiExporter]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|SlicerToKiwiExporter]] extension)</small>
* [[Documentation/Nightly/Extensions/Reporting|Label To DICOMSEGConverter]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/Reporting|Reporting]] extension)</small>
+
* [[Documentation/Nightly/Extensions/SliceTracker|SliceTracker]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SliceTracker|SliceTracker]] extension)</small>
* [[Documentation/Nightly/Modules/LandmarkRegistration|Landmark Registration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
+
* [[Documentation/Nightly/Extensions/SliceTracker|SliceTrackerRegistration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SliceTracker|SliceTracker]] extension)</small>
* [[Documentation/Nightly/Modules/LASegmentationWorkflow|LASegmentation Workflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
+
* [[Documentation/Nightly/Extensions/SliceTracker|SliceTrackerZFrameRegistration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SliceTracker|SliceTracker]] extension)</small>
* [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
+
* [[Documentation/Nightly/Modules/SobolevSegmenter|SobolevSegmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SobolevSegmenter|SobolevSegmenter]] extension)</small>
* [[Documentation/Nightly/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
+
* [[Documentation/Nightly/Extensions/IASEM|SpacingAwareCurvatureDiffusion]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
* [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]]   <small>(scripted, bundled in [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]] extension)</small>
+
* [[Documentation/Nightly/Modules/SpinalCurvatureMeasurement|SpinalCurvatureMeasurement]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis]] extension)</small>
* [[Documentation/Nightly/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small>
+
* [http://www.chestimagingplatform.org SplitLeftLungRightLung]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[Documentation/Nightly/Extensions/SlicerRT|Plm Register]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
+
* [[Documentation/Nightly/Modules/SubjectHierarchy|SubjectHierarchy]]    <small>(loadable, built-in)</small>
* [[Documentation/Nightly/Modules/PlusRemote|Plus Remote]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
+
* [[Documentation/Nightly/Modules/SubtractScalarVolumes|SubtractScalarVolumes]]   <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/PortPlacement|Port Placement]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]] extension)</small>
+
* [[Documentation/Nightly/Modules/SurfaceRegistration|SurfaceRegistration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
* [[Documentation/Nightly/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] extension)</small>
+
* [[Documentation/Nightly/Modules/SurfaceToolbox|SurfaceToolbox]]    <small>(scripted, built-in)</small>
* [[Documentation/Nightly/Extensions/PerkTutor|Python Metrics Calculator]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small>
+
* [[Documentation/Nightly/Modules/SUVFactorCalculator|SUVFactorCalculator]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PETDICOM|PETDICOMExtension]] extension)</small>
* [[Documentation/Nightly/Modules/ResectionVolume|Resection Volume]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ResectionPlanner|Resection Planner]] extension)</small>
+
* [[Documentation/Nightly/Modules/SwissSkullStripper|SwissSkullStripper]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SwissSkullStripper|SwissSkullStripper]] extension)</small>
* [[Documentation/Nightly/Modules/SampleData|Sample Data]]    <small>(scripted, built-in)</small>
+
* [[Documentation/Nightly/Extensions/MarginCalculator|SyntheticRTDose]]   <small>(scripted, bundled in [[Documentation/Nightly/Extensions/MarginCalculator|MarginCalculator]] extension)</small>
* [[Documentation/Nightly/Modules/ScarVisualization|Scar Visualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
+
* [[Documentation/Nightly/Modules/T1Mapping|T1Mapping]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/T1Mapping|T1Mapping]] extension)</small>
* Scene Performance   <small>(scripted, built-in)</small>
+
* [[Documentation/Nightly/Modules/Tables|Tables]]    <small>(loadable, built-in)</small>
* [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis Monitoring]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
* [[Documentation/Nightly/Modules/SegmentCAD|Segment CAD]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] extension)</small>
 
* [[Documentation/Nightly/Modules/SimpleFilters|Simple Filters]]    <small>(scripted, built-in)</small>
 
* Slice Link Logic    <small>(scripted, built-in)</small>
 
* Slicer4Minute    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small>
 
* [[Documentation/Nightly/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
* [[Documentation/Nightly/Extensions/CMFreg|Surface Registration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/SurfaceToolbox|Surface Toolbox]]    <small>(scripted, built-in)</small>
 
 
* [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]] extension)</small>
 
* [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]] extension)</small>
* [[Documentation/Nightly/Modules/ThingiverseBrowser|Thingiverse Browser]]   <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ThingiverseBrowser|Thingiverse Browser]] extension)</small>
+
* Terminologies   <small>(loadable, built-in)</small>
* [[Documentation/Nightly/Modules/VectorToScalarVolume|Vector To Scalar Volume]]    <small>(scripted, built-in)</small>
+
* [[Documentation/Nightly/Extensions/SlicerIGT|TextureModel]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
* [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
+
* [[Documentation/Nightly/Modules/ThresholdScalarVolume|ThresholdScalarVolume]]    <small>(cli, built-in)</small>
* [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip With Model]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip]] extension)</small>
+
* [[Documentation/Nightly/Extensions/DCMQI|tid1500reader]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DCMQI|DCMQI]] extension)</small>
* [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip With Roi]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip]] extension)</small>
+
* [[Documentation/Nightly/Extensions/DCMQI|tid1500writer]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DCMQI|DCMQI]] extension)</small>
* Volume Rendering Scene Close    <small>(scripted, built-in)</small>
+
* [[Documentation/Nightly/Modules/TrackerStabilizer|TrackerStabilizer]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/TrackerStabilizer|TrackerStabilizer]] extension)</small>
* [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small>
+
* [[Documentation/Nightly/Modules/TractographyDisplay|TractographyDisplay]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|SlicerDMRI]] extension)</small>
* [[Documentation/Nightly/Extensions/XNATSlicer|Xnat Slicer]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] extension)</small>
+
* [[Documentation/Nightly/Modules/TractographyInteractiveSeeding|TractographyInteractiveSeeding]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|SlicerDMRI]] extension)</small>
= Modules by extension =
+
* [[Documentation/Nightly/Modules/TractographyLabelMapSeeding|TractographyLabelMapSeeding]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|SlicerDMRI]] extension)</small>
57 extensions:
+
* [http://www.chestimagingplatform.org TransferRegionAndTypeIndicesToFromPoints]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest_Imaging_Platform] extension)</small>
* [[#ABC|ABC]]
+
* [[Documentation/Nightly/Extensions/SlicerIGT|TransformFusion]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
* [[#AirwaySegmentation|Airway Segmentation]]
+
* [[Documentation/Nightly/Modules/TransformRecorder|TransformRecorder]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|PerkTutor]] extension)</small>
* [[#builtin|builtin]]
 
* [[#Cardiac_MRI_Toolkit|Cardiac MRI Toolkit]]
 
* [[#CardiacAgastonMeasures|Cardiac Agaston Measures]]
 
* [[#CarreraSlice|Carrera Slice]]
 
* [[#CBC_3D_I2MConversion|CBC 3D I2MConversion]]
 
* [[#ChangeTracker|Change Tracker]]
 
* [[#CleaverExtension|Cleaver Extension]]
 
* [[#CMFreg|CMFreg]]
 
* [[#CornerAnnotation|Corner Annotation]]
 
* [[#CurveMaker|Curve Maker]]
 
* [[#DiceComputation|Dice Computation]]
 
* [[#DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]
 
* [[#ErodeDilateLabel|Erode Dilate Label]]
 
* [[#FastGrowCutEffect|Fast Grow Cut Effect]]
 
* [[#FinslerTractography|Finsler Tractography]]
 
* [[#GelDosimetryAnalysis|Gel Dosimetry Analysis]]
 
* [[#GyroGuide|Gyro Guide]]
 
* [[#IASEM|IASEM]]
 
* [[#iGyne|i Gyne]]
 
* [[#ImageMaker|Image Maker]]
 
* [[#IntensitySegmenter|Intensity Segmenter]]
 
* [[#LAScarSegmenter|LAScar Segmenter]]
 
* [[#LightWeightRobotIGT|Light Weight Robot IGT]]
 
* [[#LongitudinalPETCT|Longitudinal PETCT]]
 
* [[#MABMIS|MABMIS]]
 
* [[#MatlabBridge|Matlab Bridge]]
 
* [[#MeshToLabelMap|Mesh To Label Map]]
 
* [[#MultidimData|Multidim Data]]
 
* [[#NeedleFinder|Needle Finder]]
 
* [[#OpenCAD|Open CAD]]
 
* [[#PBNRR|PBNRR]]
 
* [[#PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]
 
* [[#PerkTutor|Perk Tutor]]
 
* [[#PETDICOMExtension|PETDICOMExtension]]
 
* [[#PkModeling|Pk Modeling]]
 
* [[#PortPlacement|Port Placement]]
 
* [[#PyDevRemoteDebug|Py Dev Remote Debug]]
 
* [[#Reporting|Reporting]]
 
* [[#ResectionPlanner|Resection Planner]]
 
* [[#Scoliosis|Scoliosis]]
 
* [[#SegmentationAidedRegistration|Segmentation Aided Registration]]
 
* [[#Slicer-AirwaySegmentation|Airway Segmentation]]
 
* [[#SlicerExtension-VMTK|VMTK]]
 
* [[#SlicerIGT|Slicer IGT]]
 
* [[#SlicerRT|Slicer RT]]
 
* [[#SlicerToKiwiExporter|Slicer To Kiwi Exporter]]
 
* [[#SobolevSegmenter|Sobolev Segmenter]]
 
* [[#SwissSkullStripper|Swiss Skull Stripper]]
 
* [[#TCIABrowser|TCIABrowser]]
 
* [[#ThingiverseBrowser|Thingiverse Browser]]
 
* [[#TrackerStabilizer|Tracker Stabilizer]]
 
* [[#UKFTractography|UKFTractography]]
 
* [[#VolumeClip|Volume Clip]]
 
* [[#WindowLevelEffect|Window Level Effect]]
 
* [[#XNATSlicer|XNATSlicer]]
 
== ABC ==
 
* [http://www.nitrc.org/projects/abc ABC]    <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small>
 
== AirwaySegmentation ==
 
* [[Documentation/Nightly/Extensions/AirwaySegmentation|Airway Segmentation CLI]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/AirwaySegmentation|Airway Segmentation]] extension)</small>
 
== builtin ==
 
* [[Documentation/Nightly/Modules/ACPCTransform|ACPCTransform]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/AddScalarVolumes|Add Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/BRAINSDemonWarp|BRAINSDemon Warp]]   <small>(cli, built-in)</small>
 
* BRAINSDWICleanup    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/BRAINSFit|BRAINSFit]]    <small>(cli, built-in)</small>
 
* BRAINSLabel Stats    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/BRAINSResample|BRAINSResample]]    <small>(cli, built-in)</small>
 
* BRAINSResize    <small>(cli, built-in)</small>
 
* BRAINSROIAuto    <small>(cli, built-in)</small>
 
* BRAINSStrip Rotation    <small>(cli, built-in)</small>
 
* BRAINSTransform Convert    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/BSplineToDeformationField|BSpline To Deformation Field]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/Cameras|Cameras]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/CastScalarVolume|Cast Scalar Volume]]   <small>(cli, built-in)</small>
 
* Charting    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Modules/CheckerBoardFilter|Checker Board Filter]]    <small>(cli, built-in)</small>
 
* CLIROITest    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/Colors|Colors]]   <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/CreateDICOMSeries|Create DICOMSeries]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/CropVolume|Crop Volume]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/Data|Data]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/DataProbe|Data Probe]]   <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Modules/DataStore|Data Store]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/DICOM|DICOM]]   <small>(scripted, built-in)</small>
 
* DICOM2Full Brain Tractography    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Modules/DiffusionTensorScalarMeasurements|Diffusion Tensor Scalar Measurements]]    <small>(cli, built-in)</small>
 
* Diffusion Tensor Test    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]]    <small>(cli, built-in)</small>
 
* Double Arrays    <small>(loadable, built-in)</small>
 
* DTIexport    <small>(cli, built-in)</small>
 
* DTIimport    <small>(cli, built-in)</small>
 
* DWIConvert    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/DWIToDTIEstimation|DWITo DTIEstimation]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/DWIUnbiasedNonLocalMeansFilter|DWIUnbiased Non Local Means Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/EMSegment|EMSegment]]    <small>(loadable, built-in)</small>
 
* EMSegment Command Line    <small>(cli, built-in)</small>
 
* EMSegment Quick    <small>(loadable, built-in)</small>
 
* EMSegment Transform To New Format    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/Endoscopy|Endoscopy]]    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Modules/ExecutionModelTour|Execution Model Tour]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ExpertAutomatedRegistration|Expert Automated Registration]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ExtensionWizard|Extension Wizard]]    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli, built-in)</small>
 
* Fiber Bundle Label Select    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]]    <small>(scripted, built-in)</small>
 
* Fiber Tract Measurements    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/FiducialRegistration|Fiducial Registration]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/GrayscaleGrindPeakImageFilter|Grayscale Grind Peak Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/GrayscaleModelMaker|Grayscale Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/HistogramMatching|Histogram Matching]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ImageLabelCombine|Image Label Combine]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/LabelMapSmoothing|Label Map Smoothing]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/Markups|Markups]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/MaskScalarVolume|Mask Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/MedianImageFilter|Median Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/MergeModels|Merge Models]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ModelMaker|Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/Models|Models]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/ModelToLabelMap|Model To Label Map]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/MultiplyScalarVolumes|Multiply Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/OpenIGTLinkIF|Open IGTLink IF]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/OrientScalarVolume|Orient Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/OtsuThresholdImageFilter|Otsu Threshold Image Filter]]    <small>(cli, built-in)</small>
 
* Perform Metric Test    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ProbeVolumeWithModel|Probe Volume With Model]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/Reformat|Reformat]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/ResampleDTIVolume|Resample DTIVolume]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ResampleScalarVectorDWIVolume|Resample Scalar Vector DWIVolume]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ResampleScalarVolume|Resample Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/SampleData|Sample Data]]    <small>(scripted, built-in)</small>
 
* Scene Performance    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Modules/SceneViews|Scene Views]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/SimpleFilters|Simple Filters]]    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Modules/SimpleRegionGrowingSegmentation|Simple Region Growing Segmentation]]    <small>(cli, built-in)</small>
 
* Slice Link Logic    <small>(scripted, built-in)</small>
 
* Slicer4Minute    <small>(scripted, built-in)</small>
 
* [[Documentation/Nightly/Modules/SubjectHierarchy|Subject Hierarchy]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/SubtractScalarVolumes|Subtract Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/SurfaceToolbox|Surface Toolbox]]    <small>(scripted, built-in)</small>
 
* Test Grid Transform Registration    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/ThresholdScalarVolume|Threshold Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/Nightly/Modules/TractographyDisplay|Tractography Display]]    <small>(loadable, built-in)</small>
 
* Tractography Interactive Seeding    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]]    <small>(cli, built-in)</small>
 
 
* [[Documentation/Nightly/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 +
* [[Documentation/Nightly/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/SlicerIGT|UltrasoundSnapshots]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
 
* [[Documentation/Nightly/Modules/Units|Units]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/Units|Units]]    <small>(loadable, built-in)</small>
* VBRAINSDemon Warp   <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Extensions/SlicerHeart|ValveView]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerHeart|SlicerHeart]] extension)</small>
* [[Documentation/Nightly/Modules/VectorToScalarVolume|Vector To Scalar Volume]]    <small>(scripted, built-in)</small>
+
* VBRAINSDemonWarp   <small>(cli, built-in)</small>
* [[Documentation/Nightly/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
+
* [[Documentation/Nightly/Modules/VectorToScalarVolume|VectorToScalarVolume]]    <small>(scripted, built-in)</small>
* [[Documentation/Nightly/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
+
* [http://slicer.vmtk.org/ VesselnessFiltering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
* Volume Rendering Scene Close   <small>(scripted, built-in)</small>
+
* [[Documentation/Nightly/Extensions/SlicerRT|VffFileReader]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|SlicerRT]] extension)</small>
 +
* [[Documentation/Nightly/Modules/ViewControllers|ViewControllers]]    <small>(loadable, built-in)</small>
 +
* [[Documentation/Nightly/Extensions/SlicerIGT|Viewpoint]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
 +
* [[Documentation/Nightly/Modules/VirtualReality|VirtualReality]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerVirtualReality|SlicerVirtualReality]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/SliceTracker|VolumeClipToLabel]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SliceTracker|SliceTracker]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/VolumeClip|VolumeClipWithModel]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/VolumeClip|VolumeClip]] extension)</small>
 +
* [[Documentation/Nightly/Extensions/VolumeClip|VolumeClipWithRoi]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/VolumeClip|VolumeClip]] extension)</small>
 +
* [[Documentation/Nightly/Modules/VolumeRendering|VolumeRendering]]    <small>(loadable, built-in)</small>
 +
* [[Documentation/Nightly/Modules/VolumeResliceDriver|VolumeResliceDriver]]   <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
 
* [[Documentation/Nightly/Modules/Volumes|Volumes]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/Volumes|Volumes]]    <small>(loadable, built-in)</small>
* [[Documentation/Nightly/Modules/VotingBinaryHoleFillingImageFilter|Voting Binary Hole Filling Image Filter]]    <small>(cli, built-in)</small>
+
* [[Documentation/Nightly/Modules/VotingBinaryHoleFillingImageFilter|VotingBinaryHoleFillingImageFilter]]    <small>(cli, built-in)</small>
 +
* [[Documentation/Nightly/Extensions/SlicerDMRI|VTK_to_DICOMTract]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|SlicerDMRI]] extension)</small>
 +
* [https://github.com/Tomnl/Slicer-Wasp Wasp]    <small>(scripted, bundled in [https://github.com/Tomnl/Slicer-Wasp Wasp] extension)</small>
 +
* [[Documentation/Nightly/Modules/Watchdog|Watchdog]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|SlicerIGT]] extension)</small>
 
* [[Documentation/Nightly/Modules/Welcome|Welcome]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/Welcome|Welcome]]    <small>(loadable, built-in)</small>
== Cardiac_MRI_Toolkit ==
+
* [[Documentation/Nightly/Extensions/WindowLevelEffect|WindowLevelEffect]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/WindowLevelEffect|WindowLevelEffect]] extension)</small>
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
+
* [[Documentation/Nightly/Modules/WorkflowSegmentation|WorkflowSegmentation]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|PerkTutor]] extension)</small>
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
+
* [[Documentation/Nightly/Extensions/XNATSlicer|XnatSlicer]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] extension)</small>
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Boolean REMOVEFilter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
+
* [[Documentation/Nightly/Extensions/SliceTracker|ZFrameCalibration]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SliceTracker|SliceTracker]] extension)</small>
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Connected Threshold Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Isolated Connected Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/Nightly/Modules/LASegmentationWorkflow|LASegmentation Workflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/Nightly/Modules/ScarVisualization|Scar Visualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
== CardiacAgastonMeasures ==
 
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures]    <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] extension)</small>
 
== CarreraSlice ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter KUtil]    <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
== CBC_3D_I2MConversion ==
 
* [[Documentation/Nightly/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/Nightly/Modules/MeshCompression|Mesh Compression]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
== ChangeTracker ==
 
* [[Documentation/Nightly/Modules/ChangeTracker|Change Tracker]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
* [[Documentation/Nightly/Modules/IntensityDifferenceMetric|Intensity Difference Metric]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
== CleaverExtension ==
 
* [[Documentation/Nightly/Extensions/CleaverExtension|Cleaver CLI]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CleaverExtension|Cleaver Extension]] extension)</small>
 
== CMFreg ==
 
* [[Documentation/Nightly/Extensions/CMFreg|Apply Matrix]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/CompareVolumes|Compare Volumes]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/LabelAddition|Label Addition]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/LabelExtraction|Label Extraction]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/LandmarkRegistration|Landmark Registration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Extensions/CMFreg|Surface Registration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
== CornerAnnotation ==
 
* [[Documentation/Nightly/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
== CurveMaker ==
 
* [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]] extension)</small>
 
== DiceComputation ==
 
* [[Documentation/Nightly/Modules/DiceComputation|Dice Computation]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/DiceComputation|Dice Computation]] extension)</small>
 
== DTIAtlasFiberAnalyzer ==
 
* [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|Fiber Compare]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|Merge Stat With Fiber]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
== ErodeDilateLabel ==
 
* [[Documentation/Nightly/Extensions/ErodeDilateLabel|Dilate Label]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
 
* [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Label]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
 
== FastGrowCutEffect ==
 
* [[Documentation/Nightly/Modules/FastGrowCut|Fast Grow Cut]]    <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small>
 
== FinslerTractography ==
 
* [[Documentation/Nightly/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/Nightly/Modules/FinslerTractography|Finsler Tractography]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
== GelDosimetryAnalysis ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo]    <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
== GyroGuide ==
 
* [[Documentation/Nightly/Modules/GyroGuide|Gyro Guide]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] extension)</small>
 
== IASEM ==
 
* [[Documentation/Nightly/Extensions/IASEM|Binary Watershed Effect]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/Nightly/Extensions/IASEM|Bin Shrink]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/Nightly/Extensions/IASEM|Double Threshold Effect]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/Nightly/Extensions/IASEM|IASEMImport]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/Nightly/Extensions/IASEM|IASEMImport Series]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/Nightly/Extensions/IASEM|Label Object Statistics]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/Nightly/Extensions/IASEM|Spacing Aware Curvature Diffusion]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
 
== iGyne ==
 
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/iGyne|i Gyne]] extension)</small>
 
== ImageMaker ==
 
* [[Documentation/Nightly/Modules/ImageMaker|Image Maker]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/ImageMaker|Image Maker]] extension)</small>
 
== IntensitySegmenter ==
 
* [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small>
 
== LAScarSegmenter ==
 
* [[Documentation/Nightly/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
== LightWeightRobotIGT ==
 
* [[Documentation/Nightly/Extensions/LightWeightRobotIGT|Light Weight Robot IGT]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/LightWeightRobotIGT|Light Weight Robot IGT]] extension)</small>
 
== LongitudinalPETCT ==
 
* [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
== MABMIS ==
 
* [[Documentation/Nightly/Extensions/MABMIS|IGR3D MABMIS Testing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] extension)</small>
 
* [[Documentation/Nightly/Extensions/MABMIS|IGR3D MABMIS Training]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] extension)</small>
 
== MatlabBridge ==
 
* [[Documentation/Nightly/Modules/MatlabCommander|Matlab Commander]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/Nightly/Modules/MatlabModuleGenerator|Matlab Module Generator]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
== MeshToLabelMap ==
 
* [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]] extension)</small>
 
== MultidimData ==
 
* [[Documentation/Nightly/Extensions/MultidimData|Metafile Importer]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/Nightly/Extensions/MultidimData|Sequence Browser]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/Nightly/Extensions/MultidimData|Sequences]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small>
 
== NeedleFinder ==
 
* [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
== OpenCAD ==
 
* [[Documentation/Nightly/Modules/HeterogeneityCAD|Heterogeneity CAD]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] extension)</small>
 
* [[Documentation/Nightly/Modules/SegmentCAD|Segment CAD]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] extension)</small>
 
== PBNRR ==
 
* [[Documentation/Nightly/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] extension)</small>
 
== PercutaneousApproachAnalysis ==
 
* [[Documentation/Nightly/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small>
 
== PerkTutor ==
 
* [[Documentation/Nightly/Modules/PerkEvaluator|Perk Evaluator]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/Nightly/Extensions/PerkTutor|Python Metrics Calculator]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/Nightly/Modules/TransformRecorder|Transform Recorder]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/Nightly/Modules/WorkflowSegmentation|Workflow Segmentation]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
== PETDICOMExtension ==
 
* [[Documentation/Nightly/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
== PkModeling ==
 
* [[Documentation/Nightly/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PkModeling|Pk Modeling]] extension)</small>
 
== PortPlacement ==
 
* [[Documentation/Nightly/Modules/PortPlacement|Port Placement]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]] extension)</small>
 
== PyDevRemoteDebug ==
 
* [[Documentation/Nightly/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] extension)</small>
 
== Reporting ==
 
* [[Documentation/Nightly/Extensions/Reporting|Label To DICOMSEGConverter]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/Reporting|Reporting]] extension)</small>
 
* [[Documentation/Nightly/Extensions/Reporting|Reporting]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/Reporting|Reporting]] extension)</small>
 
== ResectionPlanner ==
 
* [[Documentation/Nightly/Modules/ResectionVolume|Resection Volume]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ResectionPlanner|Resection Planner]] extension)</small>
 
== Scoliosis ==
 
* [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis Monitoring]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
* [[Documentation/Nightly/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
== SegmentationAidedRegistration ==
 
* [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
== Slicer-AirwaySegmentation ==
 
* [[Documentation/Nightly/Modules/AirwaySegmentation|Airway Segmentation]]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation] extension)</small>
 
== SlicerExtension-VMTK ==
 
* [http://slicer.vmtk.org/ Centerline Computation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
== SlicerIGT ==
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Breach Warning]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Modules/CollectFiducials|Collect Fiducials]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Create Models]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Fiducial Registration Wizard]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Fiducials To Model Registration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Modules/OpenIGTLinkRemote|Open IGTLink Remote]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Modules/PathExplorer|Path Explorer]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Pivot Calibration]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Modules/PlusRemote|Plus Remote]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Transform Fusion]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Ultrasound Snapshots]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Modules/VolumeResliceDriver|Volume Reslice Driver]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
== SlicerRT ==
 
* [[Documentation/Nightly/Extensions/SlicerRT|Batch Contour Conversion]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|Beams]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/ContourComparison|Contour Comparison]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/ContourMorphology|Contour Morphology]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/Contours|Contours]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|Dicom Rt Import Export]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/DicomSroExport|Dicom Sro Export]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/DicomSroImport|Dicom Sro Import]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/DoseAccumulation|Dose Accumulation]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/DoseComparison|Dose Comparison]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/DoseVolumeHistogram|Dose Volume Histogram]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|Dvh Comparison]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Modules/Isodose|Isodose]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|Planar Image]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|plastimatch slicer bspline]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|plastimatch slicer dicomrt export]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|plastimatch slicer dicomrt import]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|plastimatch slicer landwarp]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|plastimatch slicer xformwarp]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|Plastimatch Py]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|Plm Register]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerRT|Vff File Reader]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== SlicerToKiwiExporter ==
 
* [[Documentation/Nightly/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small>
 
== SobolevSegmenter ==
 
* [[Documentation/Nightly/Modules/SobolevSegmenter|Sobolev Segmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SobolevSegmenter|Sobolev Segmenter]] extension)</small>
 
== SwissSkullStripper ==
 
* [[Documentation/Nightly/Modules/SwissSkullStripper|Swiss Skull Stripper]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]] extension)</small>
 
== TCIABrowser ==
 
* [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]] extension)</small>
 
== ThingiverseBrowser ==
 
* [[Documentation/Nightly/Modules/ThingiverseBrowser|Thingiverse Browser]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ThingiverseBrowser|Thingiverse Browser]] extension)</small>
 
== TrackerStabilizer ==
 
* [[Documentation/Nightly/Modules/TrackerStabilizer|Tracker Stabilizer]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small>
 
== UKFTractography ==
 
* [[Documentation/Nightly/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* [[Documentation/Nightly/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
== VolumeClip ==
 
* [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip With Model]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip]] extension)</small>
 
* [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip With Roi]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip]] extension)</small>
 
== WindowLevelEffect ==
 
* [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small>
 
== XNATSlicer ==
 
* [[Documentation/Nightly/Extensions/XNATSlicer|Xnat Slicer]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] extension)</small>
 
= Extensions by name =
 
56 extensions:
 
* [http://www.nitrc.org/projects/abc ABC]
 
* [[Documentation/Nightly/Extensions/AirwaySegmentation|Airway Segmentation]]
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit]
 
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures]
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
* [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]]
 
* [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]]
 
* [[Documentation/Nightly/Extensions/CleaverExtension|Cleaver Extension]]
 
* [[Documentation/Nightly/Extensions/CMFreg|CMFreg]]
 
* [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]]
 
* [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]]
 
* [[Documentation/Nightly/Extensions/DiceComputation|Dice Computation]]
 
* [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]
 
* [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Dilate Label]]
 
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect]
 
* [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]
 
* [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]]
 
* [[Documentation/Nightly/Extensions/IASEM|IASEM]]
 
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]
 
* [[Documentation/Nightly/Extensions/ImageMaker|Image Maker]]
 
* [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]]
 
* [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
* [[Documentation/Nightly/Extensions/LightWeightRobotIGT|Light Weight Robot IGT]]
 
* [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]]
 
* [[Documentation/Nightly/Extensions/MABMIS|MABMIS]]
 
* [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]]
 
* [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]]
 
* [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]]
 
* [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]]
 
* [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]]
 
* [[Documentation/Nightly/Extensions/PBNRR|PBNRR]]
 
* [[Documentation/Nightly/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]
 
* [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension]
 
* [[Documentation/Nightly/Extensions/PkModeling|Pk Modeling]]
 
* [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]]
 
* [[Documentation/Nightly/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]]
 
* [[Documentation/Nightly/Extensions/Reporting|Reporting]]
 
* [[Documentation/Nightly/Extensions/ResectionPlanner|Resection Planner]]
 
* [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation]
 
* [http://slicer.vmtk.org/ VMTK]
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]]
 
* [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]]
 
* [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]
 
* [[Documentation/Nightly/Extensions/SobolevSegmenter|Sobolev Segmenter]]
 
* [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]]
 
* [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]]
 
* [[Documentation/Nightly/Extensions/ThingiverseBrowser|Thingiverse Browser]]
 
* [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]]
 
* [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]]
 
* [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip]]
 
* [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]]
 
* [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]]
 
= Extensions by category =
 
25 categories:
 
* [[#Cardiac|Cardiac]]
 
* [[#Cardiac_MRI_toolkit|Cardiac MRI toolkit]]
 
* [[#Converters|Converters]]
 
* [[#Developer_Tools|Developer Tools]]
 
* [[#Diffusion|Diffusion]]
 
* [[#Editor_Effects|Editor Effects]]
 
* [[#Exporter|Exporter]]
 
* [[#Filtering|Filtering]]
 
** [[#Morphology|Morphology]]
 
* [[#IGT|IGT]]
 
* [[#Informatics|Informatics]]
 
* [[#Mesh_Generation|Mesh Generation]]
 
* [[#Microscopy|Microscopy]]
 
* [[#Multidimensional_data|Multidimensional data]]
 
* [[#Quantification|Quantification]]
 
* [[#Radiotherapy|Radiotherapy]]
 
* [[#Registration|Registration]]
 
* [[#Remote|Remote]]
 
* [[#Scoliosis|Scoliosis]]
 
* [[#Segmentation|Segmentation]]
 
* [[#Shape_Analysis|Shape Analysis]]
 
* [[#Tractography|Tractography]]
 
* [[#Training|Training]]
 
* [[#Utilities|Utilities]]
 
* [[#Vascular_Modeling_Toolkit|Vascular Modeling Toolkit]]
 
* [[#Wizards|Wizards]]
 
== Cardiac ==
 
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures]
 
== Cardiac MRI toolkit ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit]
 
== Converters ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension]
 
== Developer Tools ==
 
* [[Documentation/Nightly/Extensions/ImageMaker|Image Maker]]
 
* [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]]
 
* [[Documentation/Nightly/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]]
 
== Diffusion ==
 
* [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]
 
== Editor Effects ==
 
* [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]]
 
== Exporter ==
 
* [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]
 
== Filtering ==
 
=== Morphology ===
 
* [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Dilate Label]]
 
== IGT ==
 
* [[Documentation/Nightly/Extensions/LightWeightRobotIGT|Light Weight Robot IGT]]
 
* [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]]
 
* [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]]
 
* [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]]
 
* [[Documentation/Nightly/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]
 
* [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]]
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]]
 
* [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]]
 
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]
 
* [[Documentation/Nightly/Extensions/ResectionPlanner|Resection Planner]]
 
== Informatics ==
 
* [[Documentation/Nightly/Extensions/Reporting|Reporting]]
 
* [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]]
 
* [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]]
 
* [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]]
 
== Mesh Generation ==
 
* [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]]
 
* [[Documentation/Nightly/Extensions/CleaverExtension|Cleaver Extension]]
 
== Microscopy ==
 
* [[Documentation/Nightly/Extensions/IASEM|IASEM]]
 
== Multidimensional data ==
 
* [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]]
 
== Quantification ==
 
* [[Documentation/Nightly/Extensions/DiceComputation|Dice Computation]]
 
* [[Documentation/Nightly/Extensions/PkModeling|Pk Modeling]]
 
== Radiotherapy ==
 
* [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]
 
== Registration ==
 
* [[Documentation/Nightly/Extensions/CMFreg|CMFreg]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
* [[Documentation/Nightly/Extensions/PBNRR|PBNRR]]
 
== Remote ==
 
* [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]]
 
== Scoliosis ==
 
* [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis]]
 
== Segmentation ==
 
* [[Documentation/Nightly/Extensions/AirwaySegmentation|Airway Segmentation]]
 
* [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]]
 
* [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]]
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
* [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation]
 
* [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]]
 
* [[Documentation/Nightly/Extensions/MABMIS|MABMIS]]
 
* [http://www.nitrc.org/projects/abc ABC]
 
* [[Documentation/Nightly/Extensions/SobolevSegmenter|Sobolev Segmenter]]
 
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect]
 
* [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip]]
 
== Shape Analysis ==
 
* [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]]
 
== Tractography ==
 
* [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]]
 
* [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]]
 
== Training ==
 
* [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]]
 
== Utilities ==
 
* [[Documentation/Nightly/Extensions/ThingiverseBrowser|Thingiverse Browser]]
 
== Vascular Modeling Toolkit ==
 
* [http://slicer.vmtk.org/ VMTK]
 
== Wizards ==
 
* [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]]
 
= Extensions by contributing organization =
 
54 contributing organizations:
 
* [[#Asclepios_INRIA.29_and_Nikos_Chrisochoides_.28CRTC|Asclepios INRIA) and Nikos Chrisochoides (CRTC]]
 
* [[#Boston_Childrens_Hospital|Boston Childrens Hospital]]
 
* [[#Brigham_and_Women_s_Hospital|Brigham and Women's Hospital]]
 
* [[#BWH|BWH]]
 
* [[#BWH___MGH|BWH & MGH]]
 
* [[#BWH.2C_SPL|BWH, SPL]]
 
* [[#BWH.2FUAB|BWH/UAB]]
 
* [[#CARMA|CARMA]]
 
* [[#College_of_Information_Engineering.2C_Zhejiang_University_of_Technology.2C_Hangzhou.2C_China|College of Information Engineering, Zhejiang University of Technology, Hangzhou, China]]
 
* [[#Crisalix|Crisalix]]
 
* [[#CRTC|CRTC]]
 
* [[#Department_of_Neurosurgery.2C_PLA_General_Hospital.2C_Beijing.2C_China|Department of Neurosurgery, PLA General Hospital, Beijing, China]]
 
* [[#Department_of_Orthodontics.2C_UNC|Department of Orthodontics, UNC]]
 
* [[#GE|GE]]
 
* [[#GE_GLobal_Research|GE GLobal Research]]
 
* [[#GT|GT]]
 
* [[#Isomics|Isomics]]
 
* [[#Kitware|Kitware]]
 
* [[#LUH|LUH]]
 
* [[#Massachusetts_General_Hospital|Massachusetts General Hospital]]
 
* [[#Moka_Creative_LLC.2C_Washington_University_in_St._Louis|Moka Creative LLC, Washington University in St. Louis]]
 
* [[#NIRAL.2C_UNC|NIRAL, UNC]]
 
* [[#Noware|Noware]]
 
* [[#Orobix|Orobix]]
 
* [[#PerkLab_at_Queen_s_University|Perk Lab at Queen's University]]
 
* [[#PerkLab.2C_Queen_s|Perk Lab, Queen's]]
 
* [[#PerkLab.2C_Queen_s_University|Perk Lab, Queen's University]]
 
* [[#PMH|PMH]]
 
* [[#Queen_s_University|Queen's University]]
 
* [[#Radiation_Medicine_Program.2C_Princess_Margaret_Hospital.2C_University_Health_Network_Toronto|Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto]]
 
* [[#SBU|SBU]]
 
* [[#SCI_Institute|SCI Institute]]
 
* [[#Shiga_University_of_Medical_Science.2C_Japan|Shiga University of Medical Science, Japan]]
 
* [[#Shiga_University_of_Medical_Science.2C_Japan.2C_SPL|Shiga University of Medical Science, Japan, SPL]]
 
* [[#SPL|SPL]]
 
* [[#SPL_and_BWH|SPL and BWH]]
 
* [[#SPL_B_W_Harvard|SPL B&W Harvard]]
 
* [[#SRI|SRI]]
 
* [[#Stony_Brook_University|Stony Brook University]]
 
* [[#Surgical_Planning_Lab|Surgical Planning Lab]]
 
* [[#UAB|UAB]]
 
* [[#UIowa|UIowa]]
 
* [[#UNC|UNC]]
 
* [[#Univ_of_Michigan|Univ of Michigan]]
 
* [[#University_College_Cork|University College Cork]]
 
* [[#University_of_Bern|University of Bern]]
 
* [[#University_of_Heidelberg|University of Heidelberg]]
 
* [[#University_of_Iowa|University of Iowa]]
 
* [[#University_of_Utah|University of Utah]]
 
* [[#Utah|Utah]]
 
* [[#UWA|UWA]]
 
* [[#Washington_University_in_St._Louis|Washington University in St. Louis]]
 
* [[#yogesh.40bwh.harvard.edu|yogesh@bwh.harvard.edu]]
 
== Asclepios INRIA) and Nikos Chrisochoides (CRTC ==
 
* [[Documentation/Nightly/Extensions/PBNRR|PBNRR]]
 
== Boston Childrens Hospital ==
 
* [http://slicer.vmtk.org/ VMTK]
 
== Brigham and Women's Hospital ==
 
* [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Dilate Label]]
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]]
 
== BWH ==
 
* [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]]
 
* [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]]
 
* [[Documentation/Nightly/Extensions/DiceComputation|Dice Computation]]
 
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect]
 
* [[Documentation/Nightly/Extensions/LightWeightRobotIGT|Light Weight Robot IGT]]
 
* [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]]
 
* [[Documentation/Nightly/Extensions/PkModeling|Pk Modeling]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
* [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]]
 
== BWH & MGH ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
== BWH, SPL ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension]
 
== BWH/UAB ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
== CARMA ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit]
 
== College of Information Engineering, Zhejiang University of Technology, Hangzhou, China ==
 
* [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]]
 
== Crisalix ==
 
* [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]]
 
== CRTC ==
 
* [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]]
 
* [[Documentation/Nightly/Extensions/PBNRR|PBNRR]]
 
== Department of Neurosurgery, PLA General Hospital, Beijing, China ==
 
* [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]]
 
== Department of Orthodontics, UNC ==
 
* [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]]
 
== GE ==
 
* [[Documentation/Nightly/Extensions/PkModeling|Pk Modeling]]
 
== GE GLobal Research ==
 
* [[Documentation/Nightly/Extensions/MABMIS|MABMIS]]
 
== GT ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
== Isomics ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
* [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]]
 
* [http://slicer.vmtk.org/ VMTK]
 
* [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]
 
* [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]]
 
== Kitware ==
 
* [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]]
 
* [[Documentation/Nightly/Extensions/ImageMaker|Image Maker]]
 
* [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]]
 
* [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]]
 
* [http://slicer.vmtk.org/ VMTK]
 
* [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]
 
== LUH ==
 
* [[Documentation/Nightly/Extensions/LightWeightRobotIGT|Light Weight Robot IGT]]
 
== Massachusetts General Hospital ==
 
* [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]]
 
== Moka Creative LLC, Washington University in St. Louis ==
 
* [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]]
 
== NIRAL, UNC ==
 
* [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]]
 
== Noware ==
 
* [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]]
 
== Orobix ==
 
* [http://slicer.vmtk.org/ VMTK]
 
== PerkLab at Queen's University ==
 
* [[Documentation/Nightly/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]]
 
== PerkLab, Queen's ==
 
* [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]]
 
== PerkLab, Queen's University ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]
 
* [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]]
 
* [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis]]
 
* [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]]
 
* [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip]]
 
== PMH ==
 
* [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]]
 
== Queen's University ==
 
* [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]]
 
* [[Documentation/Nightly/Extensions/ResectionPlanner|Resection Planner]]
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]]
 
== Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto ==
 
* [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]]
 
* [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]]
 
== SBU ==
 
* [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
== SCI Institute ==
 
* [[Documentation/Nightly/Extensions/CleaverExtension|Cleaver Extension]]
 
== Shiga University of Medical Science, Japan ==
 
* [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]]
 
== Shiga University of Medical Science, Japan, SPL ==
 
* [[Documentation/Nightly/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]
 
== SPL ==
 
* [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]]
 
* [[Documentation/Nightly/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]
 
* [[Documentation/Nightly/Extensions/Reporting|Reporting]]
 
* [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]]
 
== SPL and BWH ==
 
* [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]]
 
== SPL B&W Harvard ==
 
* [[Documentation/Nightly/Extensions/PBNRR|PBNRR]]
 
== SRI ==
 
* [[Documentation/Nightly/Extensions/PkModeling|Pk Modeling]]
 
== Stony Brook University ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect]
 
== Surgical Planning Lab ==
 
* [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]]
 
== UAB ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect]
 
* [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
* [[Documentation/Nightly/Extensions/SobolevSegmenter|Sobolev Segmenter]]
 
== UIowa ==
 
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures]
 
== UNC ==
 
* [[Documentation/Nightly/Extensions/CMFreg|CMFreg]]
 
* [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]
 
* [[Documentation/Nightly/Extensions/MABMIS|MABMIS]]
 
* [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]]
 
* [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]]
 
== Univ of Michigan ==
 
* [[Documentation/Nightly/Extensions/CMFreg|CMFreg]]
 
== University College Cork ==
 
* [[Documentation/Nightly/Extensions/AirwaySegmentation|Airway Segmentation]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation]
 
== University of Bern ==
 
* [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]]
 
== University of Heidelberg ==
 
* [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]]
 
== University of Iowa ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension]
 
== University of Utah ==
 
* [http://www.nitrc.org/projects/abc ABC]
 
== Utah ==
 
* [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
== UWA ==
 
* [[Documentation/Nightly/Extensions/ThingiverseBrowser|Thingiverse Browser]]
 
== Washington University in St. Louis ==
 
* [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]]
 
== yogesh@bwh.harvard.edu ==
 
* [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]]
 
= Extensions by contributing individual =
 
125 contributing individuals:
 
* [[#Akila_Viswanathan|Akila Viswanathan]]
 
* [[#Alan_Morris|Alan Morris]]    <small>(Utah)</small>
 
* [[#Alex_Yarmarkovich|Alex Yarmarkovich]]    <small>(Kitware))</small>
 
* [[#Alireza_Mehrtash|Alireza Mehrtash]]    <small>(SPL and BWH)</small>
 
* [[#Allen_Tannenbaum|Allen Tannenbaum]]    <small>(Stony Brook University)</small>
 
* [[#Andinet_Enquobahrie|Andinet Enquobahrie]]    <small>(Kitware)</small>
 
* [[#Andras_Lasso|Andras Lasso]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Andre_Mastmeyer|Andre Mastmeyer]]
 
* [[#Andrey_Fedorov|Andrey Fedorov]]    <small>(SPL B&W Harvard)</small>
 
* [[#Andriy_Fedorov|Andriy Fedorov]]    <small>(BWH)</small>
 
* [[#Andriy_Kot|Andriy Kot]]    <small>(CRTC)</small>
 
* [[#Antonio_Damato|Antonio Damato]]
 
* [[#Antonio_Tristan-Vega|Antonio Tristan-Vega]]    <small>(Isomics)</small>
 
* [[#Arie_Nakhmani|Arie Nakhmani]]    <small>(UAB)</small>
 
* [[#Arnaud_Gelas|Arnaud Gelas]]    <small>(Crisalix)</small>
 
* [[#Atsushi_Yamada|Atsushi Yamada]]    <small>(Shiga University of Medical Science)</small>
 
* [[#Beatriz_Paniagua|Beatriz Paniagua]]    <small>(UNC)</small>
 
* [[#Bill_Lorensen|Bill Lorensen]]    <small>(Noware)</small>
 
* [[#Bradley_Lowekamp|Bradley Lowekamp]]    <small>(MSC/NLM)</small>
 
* [[#Brig_Bagley|Brig Bagley]]    <small>(SCI Institute)</small>
 
* [[#Carl-Fredrik_Westin|Carl-Fredrik Westin]]
 
* [[#Christian_Baumgartner|Christian Baumgartner]]
 
* [[#Csaba_Pinter|Csaba Pinter]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Dan_Marcus|Dan Marcus]]    <small>(Washington University in St. Louis)</small>
 
* [[#Daniel_Haehn|Daniel Haehn]]    <small>(UPenn)</small>
 
* [[#Danny_Perry|Danny Perry]]    <small>(Utah)</small>
 
* [[#Demian_Wasssermann|Demian Wasssermann]]
 
* [[#Dinggang_Shen|Dinggang Shen]]    <small>(UNC)</small>
 
* [[#Ethan_Ulrich|Ethan Ulrich]]    <small>(Univ. of Iowa)</small>
 
* [[#Eugene_Kholmovski|Eugene Kholmovski]]    <small>(CARMA)</small>
 
* [[#Fotis_Drakopoulos|Fotis Drakopoulos]]    <small>(CRTC)</small>
 
* [[#Francois_Budin|Francois Budin]]    <small>(NIRAL, UNC)</small>
 
* [[#Franklin_King|Franklin King]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Greg_Gardner|Greg Gardner]]    <small>(Utah)</small>
 
* [[#Greg_Sharp|Greg Sharp]]    <small>(Massachusetts General Hospital)</small>
 
* [[#Guillaume_Pernelle|Guillaume Pernelle]]
 
* [[#Hans_Johnson|Hans Johnson]]    <small>(SINAPSE)</small>
 
* [[#Ipek_Oguz|Ipek Oguz]]
 
* [[#Ivan_Kolesov|Ivan Kolesov]]    <small>(Stony Brook University)</small>
 
* [[#Jan_Egger|Jan Egger]]
 
* [[#Jayender_Jagadeesan|Jayender Jagadeesan]]    <small>(BWH)</small>
 
* [[#Jean-Christophe_Fillion-Robin|Jean-Christophe Fillion-Robin]]    <small>(Kitware)</small>
 
* [[#Jennifer_Andrea|Jennifer Andrea]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Jessica_Forbes|Jessica Forbes]]    <small>(SINAPSE)</small>
 
* [[#Jiashu_Zhang|Jiashu Zhang]]    <small>(Department of Neurosurgery, PLA General Hospital, Beijing, China)</small>
 
* [[#Jim_Miller|Jim Miller]]    <small>(GE)</small>
 
* [[#Jonathan_Bronson|Jonathan Bronson]]    <small>(SCI Institute)</small>
 
* [[#Josh_Cates|Josh Cates]]    <small>(Utah)</small>
 
* [[#Julien_Finet|Julien Finet]]    <small>(Kitware)</small>
 
* [[#Junichi_Tokuda|Junichi Tokuda]]    <small>(BWH)</small>
 
* [[#Karl_Fritscher|Karl Fritscher]]    <small>(BWH & MGH)</small>
 
* [[#Kent_Williams|Kent Williams]]    <small>(UIowa)</small>
 
* [[#Kevin_Wang|Kevin Wang]]    <small>(Princess Margaret Cancer Centre)</small>
 
* [[#Kilian_Pohl|Kilian Pohl]]    <small>(UPenn)</small>
 
* [[#Koichiro_Murakami|Koichiro Murakami]]    <small>(SUMS)</small>
 
* [[#Lauren_Barber|Lauren Barber]]
 
* [[#Laurent_Chauvin|Laurent Chauvin]]    <small>(BWH)</small>
 
* [[#Liang-Jia_Zhu|Liang-Jia Zhu]]    <small>(UAB)</small>
 
* [[#Liangjia_Zhu|Liangjia Zhu]]    <small>(Stony Brook University)</small>
 
* [[#Luca_Antiga|Luca Antiga]]    <small>(Orobix)</small>
 
* [[#Luis_G._Torres|Luis G. Torres]]    <small>(UNC)</small>
 
* [[#Luping_Fang|Luping Fang]]    <small>(College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)</small>
 
* [[#Mahnaz_Maddah|Mahnaz Maddah]]    <small>(SRI)</small>
 
* [[#Manson_Winsauer|Manson Winsauer]]    <small>(UNC)</small>
 
* [[#Marcel_Prastawa|Marcel Prastawa]]    <small>(University of Utah)</small>
 
* [[#Martin_Styner|Martin Styner]]    <small>(UNC)</small>
 
* [[#Matt_Lougheed|Matt Lougheed]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Mattea_Welch|Mattea Welch]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Matthew_Holden|Matthew Holden]]    <small>(Queen's University)</small>
 
* [[#Matthew_S._Holden|Matthew S. Holden]]    <small>(Queen's University)</small>
 
* [[#Mauricio_Reyes|Mauricio Reyes]]    <small>(University of Bern)</small>
 
* [[#Ming-ching_Chang|Ming-ching Chang]]    <small>(GE)</small>
 
* [[#Minjeong_Kim|Minjeong Kim]]    <small>(UNC)</small>
 
* [[#Nabgha_Fahrat|Nabgha Fahrat]]
 
* [[#Nicole_Aucoin|Nicole Aucoin]]    <small>(BWH)</small>
 
* [[#Nigel_Goh|Nigel Goh]]    <small>(UWA)</small>
 
* [[#Nikos_Chrisochoides|Nikos Chrisochoides]]    <small>(CRTC)</small>
 
* [[#Olivier_Clatz|Olivier Clatz]]    <small>(Asclepios INRIA) and Nikos Chrisochoides (CRTC)</small>
 
* [[#Pat_Marion|Pat Marion]]    <small>(Kitware)</small>
 
* [[#Patricio_Vela|Patricio Vela]]    <small>(GT)</small>
 
* [[#Paul_Mercea|Paul Mercea]]    <small>(University of Heidelberg)</small>
 
* [[#Pengdong_Xiao|Pengdong Xiao]]    <small>(Department of Orthodontics, UNC)</small>
 
* [[#Peter_Black|Peter Black]]    <small>(BWH)</small>
 
* [[#Peter_Karasev|Peter Karasev]]    <small>(Georgia Tech)</small>
 
* [[#Peter_Savadjiev|Peter Savadjiev]]    <small>(Kitware))</small>
 
* [[#Pietro_Nardelli|Pietro Nardelli]]    <small>(University College Cork)</small>
 
* [[#Qing_Pan|Qing Pan]]    <small>(College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)</small>
 
* [[#Rick_Herrick|Rick Herrick]]    <small>(Washington University in St. Louis)</small>
 
* [[#Rob_MacLeod|Rob Mac Leod]]    <small>(Utah)</small>
 
* [[#Ron_Kikinis|Ron Kikinis]]    <small>(BWH)</small>
 
* [[#Ruifeng_Chen|Ruifeng Chen]]    <small>(College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)</small>
 
* [[#Ryan_Eckbo|Ryan Eckbo]]
 
* [[#S|S]]
 
* [[#Salma_Bengali|Salma Bengali]]    <small>(CARMA)</small>
 
* [[#Sam_Song|Sam Song]]
 
* [[#Sebastian_Tauscher|Sebastian Tauscher]]    <small>(LUH)</small>
 
* [[#Stefan_Bauer|Stefan Bauer]]    <small>(University of Bern)</small>
 
* [[#Stefan_Lienhard|Stefan Lienhard]]
 
* [[#Steve_Pieper|Steve Pieper]]    <small>(SPL)</small>
 
* [[#Sunil_Kumar|Sunil Kumar]]    <small>(Moka Creative, LLC, kumar.sunil.p@gmail.com)</small>
 
* [[#Sylvain_Bouix|Sylvain Bouix]]    <small>(BWH)</small>
 
* [[#Tamas_Ungi|Tamas Ungi]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Thomas_Fejes|Thomas Fejes]]    <small>(University of Bern)</small>
 
* [[#Tina_Kapur|Tina Kapur]]
 
* [[#Tobias_Penzkofer|Tobias Penzkofer]]
 
* [[#Vinicius_Boen|Vinicius Boen]]    <small>(Univ of Michigan)</small>
 
* [[#Vivek_Narayan|Vivek Narayan]]    <small>(BWH)</small>
 
* [[#Xiaofeng_Liu|Xiaofeng Liu]]    <small>(GE GLobal Research)</small>
 
* [[#Xiaojun_Chen|Xiaojun Chen]]
 
* [[#Xiaolei_Chen|Xiaolei Chen]]    <small>(Department of Neurosurgery, PLA General Hospital, Beijing, China)</small>
 
* [[#y_Wells|y Wells]]
 
* [[#Yi_Gao|Yi Gao]]    <small>(BWH/UAB)</small>
 
* [[#Yingxuan_Zhu|Yingxuan Zhu]]    <small>(GE)</small>
 
* [[#Yinpeng_Li|Yinpeng Li]]
 
* [[#Yixun_Liu|Yixun Liu]]    <small>(CRTC)</small>
 
* [[#Yogesh_Rathi|Yogesh Rathi]]    <small>(yogesh@bwh.harvard.edu)</small>
 
* [[#Yundi_Shi|Yundi Shi]]
 
== Akila Viswanathan ==
 
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]
 
* [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]]
 
== Alan Morris ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit]
 
* [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
== Alex Yarmarkovich ==
 
* [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]]
 
== Alireza Mehrtash ==
 
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]
 
* [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]]
 
* [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]]
 
== Allen Tannenbaum ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect]
 
* [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
* [[Documentation/Nightly/Extensions/SobolevSegmenter|Sobolev Segmenter]]
 
== Andinet Enquobahrie ==
 
* [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]]
 
== Andras Lasso ==
 
* [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]]
 
* [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]]
 
* [[Documentation/Nightly/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]]
 
* [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]]
 
* [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]]
 
* [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip]]
 
== Andre Mastmeyer ==
 
* [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]]
 
== Andrey Fedorov ==
 
* [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]]
 
* [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]]
 
* [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]]
 
* [[Documentation/Nightly/Extensions/PBNRR|PBNRR]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension]
 
* [[Documentation/Nightly/Extensions/Reporting|Reporting]]
 
* [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]]
 
* [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]]
 
== Andriy Fedorov ==
 
* [[Documentation/Nightly/Extensions/PkModeling|Pk Modeling]]
 
== Andriy Kot ==
 
* [[Documentation/Nightly/Extensions/PBNRR|PBNRR]]
 
== Antonio Damato ==
 
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]
 
* [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]]
 
== Antonio Tristan-Vega ==
 
* [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]]
 
== Arie Nakhmani ==
 
* [[Documentation/Nightly/Extensions/SobolevSegmenter|Sobolev Segmenter]]
 
== Arnaud Gelas ==
 
* [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]]
 
== Atsushi Yamada ==
 
* [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]]
 
== Beatriz Paniagua ==
 
* [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]]
 
== Bill Lorensen ==
 
* [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]]
 
== Bradley Lowekamp ==
 
* [[Documentation/Nightly/Extensions/IASEM|IASEM]]
 
== Brig Bagley ==
 
* [[Documentation/Nightly/Extensions/CleaverExtension|Cleaver Extension]]
 
== Carl-Fredrik Westin ==
 
* [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]]
 
* [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]]
 
== Christian Baumgartner ==
 
* [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]]
 
== Csaba Pinter ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]
 
* [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]]
 
== Dan Marcus ==
 
* [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]]
 
== Daniel Haehn ==
 
* [http://slicer.vmtk.org/ VMTK]
 
== Danny Perry ==
 
* [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
== Demian Wasssermann ==
 
* [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]]
 
== Dinggang Shen ==
 
* [[Documentation/Nightly/Extensions/MABMIS|MABMIS]]
 
== Ethan Ulrich ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension]
 
== Eugene Kholmovski ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit]
 
== Fotis Drakopoulos ==
 
* [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]]
 
* [[Documentation/Nightly/Extensions/PBNRR|PBNRR]]
 
== Francois Budin ==
 
* [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]
 
* [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]]
 
* [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]]
 
== Franklin King ==
 
* [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis]]
 
== Greg Gardner ==
 
* [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
== Greg Sharp ==
 
* [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]]
 
== Guillaume Pernelle ==
 
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]
 
* [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]]
 
== Hans Johnson ==
 
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures]
 
* [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]]
 
== Ipek Oguz ==
 
* [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]]
 
== Ivan Kolesov ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect]
 
== Jan Egger ==
 
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]
 
* [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]]
 
== Jayender Jagadeesan ==
 
* [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]]
 
* [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]]
 
== Jean-Christophe Fillion-Robin ==
 
* [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]]
 
* [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]]
 
* [http://slicer.vmtk.org/ VMTK]
 
* [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]
 
== Jennifer Andrea ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]
 
== Jessica Forbes ==
 
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures]
 
== Jiashu Zhang ==
 
* [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]]
 
== Jim Miller ==
 
* [[Documentation/Nightly/Extensions/MABMIS|MABMIS]]
 
* [[Documentation/Nightly/Extensions/PkModeling|Pk Modeling]]
 
== Jonathan Bronson ==
 
* [[Documentation/Nightly/Extensions/CleaverExtension|Cleaver Extension]]
 
== Josh Cates ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit]
 
* [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
== Julien Finet ==
 
* [[Documentation/Nightly/Extensions/ImageMaker|Image Maker]]
 
== Junichi Tokuda ==
 
* [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]]
 
* [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Dilate Label]]
 
* [[Documentation/Nightly/Extensions/LightWeightRobotIGT|Light Weight Robot IGT]]
 
* [[Documentation/Nightly/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]]
 
== Karl Fritscher ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
== Kent Williams ==
 
* [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]]
 
== Kevin Wang ==
 
* [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]]
 
* [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]]
 
* [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]]
 
== Kilian Pohl ==
 
* [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]]
 
== Koichiro Murakami ==
 
* [[Documentation/Nightly/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]
 
== Lauren Barber ==
 
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]
 
* [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]]
 
== Laurent Chauvin ==
 
* [[Documentation/Nightly/Extensions/DiceComputation|Dice Computation]]
 
* [[Documentation/Nightly/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]
 
* [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]]
 
== Liang-Jia Zhu ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
== Liangjia Zhu ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect]
 
* [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
== Luca Antiga ==
 
* [http://slicer.vmtk.org/ VMTK]
 
== Luis G. Torres ==
 
* [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]]
 
== Luping Fang ==
 
* [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]]
 
== Mahnaz Maddah ==
 
* [[Documentation/Nightly/Extensions/PkModeling|Pk Modeling]]
 
== Manson Winsauer ==
 
* [[Documentation/Nightly/Extensions/CMFreg|CMFreg]]
 
== Marcel Prastawa ==
 
* [http://www.nitrc.org/projects/abc ABC]
 
== Martin Styner ==
 
* [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]]
 
== Matt Lougheed ==
 
* [[Documentation/Nightly/Extensions/ResectionPlanner|Resection Planner]]
 
* [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip]]
 
== Mattea Welch ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]
 
== Matthew Holden ==
 
* [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]]
 
== Matthew S. Holden ==
 
* [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]]
 
== Mauricio Reyes ==
 
* [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]]
 
== Ming-ching Chang ==
 
* [[Documentation/Nightly/Extensions/PkModeling|Pk Modeling]]
 
== Minjeong Kim ==
 
* [[Documentation/Nightly/Extensions/MABMIS|MABMIS]]
 
== Nabgha Fahrat ==
 
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]
 
* [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]]
 
== Nicole Aucoin ==
 
* [[Documentation/Nightly/Extensions/Reporting|Reporting]]
 
== Nigel Goh ==
 
* [[Documentation/Nightly/Extensions/ThingiverseBrowser|Thingiverse Browser]]
 
== Nikos Chrisochoides ==
 
* [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]]
 
== Olivier Clatz ==
 
* [[Documentation/Nightly/Extensions/PBNRR|PBNRR]]
 
== Pat Marion ==
 
* [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]
 
== Patricio Vela ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
== Paul Mercea ==
 
* [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]]
 
== Pengdong Xiao ==
 
* [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]]
 
== Peter Black ==
 
* [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]]
 
== Peter Karasev ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
== Peter Savadjiev ==
 
* [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]]
 
* [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]]
 
== Pietro Nardelli ==
 
* [[Documentation/Nightly/Extensions/AirwaySegmentation|Airway Segmentation]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation]
 
== Qing Pan ==
 
* [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]]
 
== Rick Herrick ==
 
* [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]]
 
== Rob MacLeod ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit]
 
* [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
== Ron Kikinis ==
 
* [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]]
 
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect]
 
== Ruifeng Chen ==
 
* [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]]
 
== Ryan Eckbo ==
 
* [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]]
 
== S ==
 
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]
 
* [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]]
 
== Salma Bengali ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit]
 
== Sam Song ==
 
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]
 
* [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]]
 
== Sebastian Tauscher ==
 
* [[Documentation/Nightly/Extensions/LightWeightRobotIGT|Light Weight Robot IGT]]
 
== Stefan Bauer ==
 
* [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]]
 
== Stefan Lienhard ==
 
* [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]]
 
== Steve Pieper ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
* [[Documentation/Nightly/Extensions/Reporting|Reporting]]
 
* [http://slicer.vmtk.org/ VMTK]
 
* [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]
 
* [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]]
 
* [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]]
 
== Sunil Kumar ==
 
* [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]]
 
== Sylvain Bouix ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
== Tamas Ungi ==
 
* [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]]
 
* [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis]]
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]]
 
== Thomas Fejes ==
 
* [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]]
 
== Tina Kapur ==
 
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]
 
* [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]]
 
== Tobias Penzkofer ==
 
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]
 
* [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]]
 
== Vinicius Boen ==
 
* [[Documentation/Nightly/Extensions/CMFreg|CMFreg]]
 
== Vivek Narayan ==
 
* [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]]
 
== Xiaofeng Liu ==
 
* [[Documentation/Nightly/Extensions/MABMIS|MABMIS]]
 
== Xiaojun Chen ==
 
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]
 
* [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]]
 
== Xiaolei Chen ==
 
* [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]]
 
== y Wells ==
 
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]
 
* [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]]
 
== Yi Gao ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect]
 
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]
 
* [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
* [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
== Yingxuan Zhu ==
 
* [[Documentation/Nightly/Extensions/PkModeling|Pk Modeling]]
 
== Yinpeng Li ==
 
* [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]]
 
== Yixun Liu ==
 
* [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]]
 
* [[Documentation/Nightly/Extensions/PBNRR|PBNRR]]
 
== Yogesh Rathi ==
 
* [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]]
 
== Yundi Shi ==
 
* [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]]
 

Latest revision as of 18:02, 13 November 2022

Home < Documentation < Nightly < ModuleExtensionListing


Modules by category

46 categories:

Astronomy

Cardiac

Cardiac MRI Toolkit

Chest Imaging Platform

Toolkit

Particles

Processing

Quantification

Registration

Segmentation

Utils

CIP

Converters

Developer Tools

DICOM Plugins

  • DICOMParametricMapPlugin
  • DicomUltrasoundPlugin
  • DICOMSegmentationPlugin
  • DICOMSlicerDataBundlePlugin
  • DICOMTID1500Plugin
  • DICOMPETSUVPlugin
  • DICOMScalarVolumePlugin
  • DICOMDiffusionVolumePlugin
  • DICOMLongitudinalPETCTPlugin
  • DicomSroImportPlugin
  • DICOMRWVMPlugin
  • DicomRtImportExportPlugin
  • MultiVolumeImporterPlugin

Editor Extensions

Matlab

Segment Editor Extensions

Utils

Diffusion

Diffusion Data Conversion

  • DWIConvert (cli, built-in)

Diffusion Tensor Images

Diffusion Weighted Images

  • BRAINSDWICleanup (cli, built-in)

Import and Export

Process

Quantify

Tractography

Region-based

Utilities

Editor Effects

EditorEffect

Endoscopy

Examples

Exporter

Filter

  • IslandRemoval (cli, built-in)

Filtering

Arithmetic

Denoising

Morphology

IGT

Informatics

Converters

Legacy

Converters

Filtering

Registration

Work in Progress

Diffusion Tensor

Test
  • DiffusionTensorTest (cli, built-in)

Libraries

Machine Learning

Margin Calculator

Mesh Generation

MeshGeneration

Microscopy

MultiVolume Support

Pathology

Perk Tutor

Plastimatch

Registration

Utilities

Quantification

ChangeQuantification

Radiology

Radiotherapy

Registration

CMF Registration

Voxelbase Registration

Label Registration

Specialized

Segmentation

Specialized

Sequences

Slicelets

SlicerProstate

Surface Models

TestCases

  • SEGExporterSelfTest

Testing

  • CLI4Test
  • ThresholdThreadingTest
  • ScoliosisMonitoring (scripted, bundled in Scoliosis extension)
  • SlicerMRBSaveRestoreCheckPathsTest
  • CLIROITest (cli, built-in)
  • PerformanceTests
  • SlicerMRBMultipleSaveRestoreTest
  • SlicerMRBTest
  • SEGExporterSelfTest
  • SelfTests
  • SlicerMRBMultipleSaveRestoreLoopTest

IGT Tests

  • BreachWarningSelfTest
  • WatchdogSelfTest

SlicerRT Tests

TestCases

  • AtlasTests
  • AddStorableDataAfterSceneViewTest
  • test_tractography_display
  • SlicerTransformInteractionTest1
  • RSNAQuantTutorial
  • NeurosurgicalPlanningTutorialMarkupsSelfTest
  • ChangeTrackerSelfTest
  • FiducialLayoutSwitchBug1914
  • GraphCutSegmentSelfTest
  • SlicerBoundsTest
  • UtilTest
  • Charting (scripted, built-in)
  • CardiacAgatstonMeasures (scripted, bundled in CardiacAgatstonMeasures extension)
  • fiber_visibility_crash2438
  • RSNAVisTutorial
  • JRC2013Vis
  • AddManyMarkupsFiducialTest
  • CropVolumeSelfTest
  • SliceLinkLogic (scripted, built-in)
  • VolumeRenderingSceneClose (scripted, built-in)
  • slicerCloseCrashBug2590
  • CLIEventTest
  • NsgPlanTracto (scripted, bundled in SlicerDMRI extension)
  • MarkupsWidgetsSelfTest
  • TablesSelfTest
  • SlicerOrientationSelectorTest
  • MarkupsInViewsSelfTest
  • TwoCLIsInParallelTest
  • SubjectHierarchyCorePluginsSelfTest
  • SubjectHierarchyGenericSelfTest
  • ScenePerformance (scripted, built-in)
  • MarkupsInCompareViewersSelfTest
  • sceneImport2428
  • RSNA2012ProstateDemo
  • DTINotReproducibleIssue3977
  • TwoCLIsInARowTest
  • ColorsScalarBarSelfTest
  • BRAINSFitRigidRegistrationCrashIssue4139
  • Slicer4Minute (scripted, built-in)
  • ViewControllersSliceInterpolationBug1926

Ultrasound

Uncategorized

Utilities

  • ScreenCapture (scripted, built-in)
  • DataStore (loadable, built-in)
  • DICOMPatcher (scripted, built-in)
  • BRAINSStripRotation (cli, built-in)
  • EMSegmentTransformToNewFormat (cli, built-in)

BRAINS

  • BRAINSTransformConvert (cli, built-in)

Vascular Modeling Toolkit

Virtual Reality

Web System Tools

Wizards

XNATSlicer

Modules by name

367 modules: