Documentation/Nightly/Modules/FiberBundleToLabelMap

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For the stable Slicer documentation, visit the 4.8 page.


Introduction and Acknowledgements


Title: Fiber Bundle to Label Map

Author(s)/Contributor(s): Steve Pieper (SPL, Isomics, Inc.), Isaiah Norton (SPL, LMI, BWH, SlicerDMRI)

License: 3D Slicer Contribution and Software License Agreement

Acknowledgements: The SlicerDMRI developers gratefully acknowledge funding for this project provided by NIH NCI ITCR U01CA199459 (Open Source Diffusion MRI Technology For Brain Cancer Research), NIH P41EB015898 (National Center for Image-Guided Therapy) and NIH P41EB015902 (Neuroimaging Analysis Center), as well as the National Alliance for Medical Image Computing (NA-MIC), funded by the National Institutes of Health through the NIH Roadmap for Medical Research, Grant U54 EB005149.

Contact: slicer-users@bwh.harvard.edu

Website: http://slicerdmri.github.io/

SlicerDMRI  
Surgical Planning Laboratory  
NAC  
Corpus callosum (CC) tracts  
Label map from the corpus callosum (CC) tracts.  


Module Description

Example of the label map generated from a set of fibers

This module sets the specified label value in the label map at every vertex in each of the fibers in a bundle.

This module first upsamples points along the fiber bundle in order to get better voxel coverage.

Tutorials

Panels and their use

  • Fiber Bundle
    • Pick a fiber bundle to rasterize
  • Target Label Map
    • The fibers will be painted into this label map. Note that this will add to and overwrite existing data, but does not clear the label map to zero first.
  • Label Value
    • Numerical value to be written into the label map.


Similar Modules

Model To Label Map

References

Information for Developers

This is a python scripted module.