Revision as of 21:08, 18 April 2017

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Modules by type

Modules by type

3 types:

cli
loadable
scripted

cli

ABC (cli, bundled in ABC extension)
ACPCTransform (cli, built-in)
Add Scalar Volumes (cli, built-in)
Airway Segmentation CLI (cli, bundled in Airway Segmentation extension)
Apply Matrix (cli, bundled in CMFreg extension)
Bin Shrink (cli, bundled in IASEM extension)
Blend Vector Volumes (cli, bundled in Open CVExample extension)
Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
BRAINSDemon Warp (cli, built-in)
BRAINSDWICleanup (cli, built-in)
BRAINSFit (cli, built-in)
BRAINSLabel Stats (cli, built-in)
BRAINSResample (cli, built-in)
BRAINSResize (cli, built-in)
BRAINSROIAuto (cli, built-in)
BRAINSStrip Rotation (cli, built-in)
BRAINSTransform Convert (cli, built-in)
BSpline To Deformation Field (cli, built-in)
Cast Scalar Volume (cli, built-in)
Checker Board Filter (cli, built-in)
Classify Fissure Particles (cli, bundled in Chest Imaging Platform extension)
Cleaver CLI (cli, bundled in Cleaver Extension extension)
CLIROITest (cli, built-in)
CMRToolkit Automatic Left Atrial Scar (cli, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
CMRToolkit LASegmentation Graph Cuts (cli, bundled in Cardiac MRI Toolkit extension)
CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
Compute Cross Sectional Area (cli, bundled in Chest Imaging Platform extension)
Compute Distance Map (cli, bundled in Chest Imaging Platform extension)
Compute Feature Strength (cli, bundled in Chest Imaging Platform extension)
Compute Fissure Feature Vectors (cli, bundled in Chest Imaging Platform extension)
Compute Intensity Statistics (cli, bundled in Chest Imaging Platform extension)
Convert Chest Region Chest Type To Label Map Value (cli, bundled in Chest Imaging Platform extension)
Convert Dicom (cli, bundled in Chest Imaging Platform extension)
Convert Label Map Value To Chest Region Chest Type (cli, bundled in Chest Imaging Platform extension)
Convert VTK (cli, bundled in UKFTractography extension)
Create DICOMSeries (cli, built-in)
Crop Lung (cli, bundled in Chest Imaging Platform extension)
Curvature Anisotropic Diffusion (cli, built-in)
DICOMTract to VTK (cli, bundled in Slicer DMRI extension)
Diffusion Tensor Scalar Measurements (cli, bundled in Slicer DMRI extension)
Diffusion Tensor Test (cli, built-in)
Diffusion Weighted Volume Masking (cli, bundled in Slicer DMRI extension)
Downsize (cli, bundled in CMFreg extension)
DSCMRIAnalysis (cli, bundled in DSCMRIAnalysis extension)
Dump SEGFrame (cli)
DWIConvert (cli, built-in)
DWITo DTIEstimation (cli, bundled in Slicer DMRI extension)
DWModeling (cli, bundled in Slicer Prostate extension)
EMSegment Command Line (cli, built-in)
EMSegment Transform To New Format (cli, built-in)
Encode SEG (cli)
Enhance Fissures In Image (cli, bundled in Chest Imaging Platform extension)
Evaluate Lung Lobe Segmentation Results (cli, bundled in Chest Imaging Platform extension)
Execute System Command (cli, bundled in Chest Imaging Platform extension)
Execution Model Tour (cli, built-in)
Expert Automated Registration (cli, built-in)
Extract Chest Label Map (cli, bundled in Chest Imaging Platform extension)
Extract Fissure Boundary From Lobe Map (cli, bundled in Chest Imaging Platform extension)
Extract Particles From Chest Region Chest Type (cli, bundled in Chest Imaging Platform extension)
Extract Skeleton (cli, built-in)
Fiber Bundle Label Select (cli, bundled in Slicer DMRI extension)
Fiber Tract Measurements (cli, bundled in Slicer DMRI extension)
Fiducial Registration (cli, built-in)
Filter Airway Particle Data (cli, bundled in Chest Imaging Platform extension)
Filter Connected Components (cli, bundled in Chest Imaging Platform extension)
Filter Fissure Particle Data (cli, bundled in Chest Imaging Platform extension)
Filter Vessel Particle Data (cli, bundled in Chest Imaging Platform extension)
Find Patch Match (cli, bundled in Chest Imaging Platform extension)
Fit Lobe Surface Models To Particle Data (cli, bundled in Chest Imaging Platform extension)
Gaussian Blur Image Filter (cli, built-in)
Generate Atlas Convex Hull (cli, bundled in Chest Imaging Platform extension)
Generate Binary Thinning3D (cli, bundled in Chest Imaging Platform extension)
Generate Distance Map From Label Map (cli, bundled in Chest Imaging Platform extension)
Generate Image Sub Volumes (cli, bundled in Chest Imaging Platform extension)
Generate Lesion Segmentation (cli, bundled in Chest Imaging Platform extension)
Generate Lobe Surface Models (cli, bundled in Chest Imaging Platform extension)
Generate Median Filtered Image (cli, bundled in Chest Imaging Platform extension)
Generate Model (cli, bundled in Chest Imaging Platform extension)
Generate NLMFiltered Image (cli, bundled in Chest Imaging Platform extension)
Generate Otsu Lung Cast (cli, bundled in Chest Imaging Platform extension)
Generate Overlay Images (cli, bundled in Chest Imaging Platform extension)
Generate Parenchyma Phenotypes (cli, bundled in Chest Imaging Platform extension)
Generate Partial Lung Label Map (cli, bundled in Chest Imaging Platform extension)
Generate Simple Lung Mask (cli, bundled in Chest Imaging Platform extension)
Generate Stenciled Label Map From Particles (cli, bundled in Chest Imaging Platform extension)
Get Structures In Label Map (cli, bundled in Chest Imaging Platform extension)
Get Transformation Kappa (cli, bundled in Chest Imaging Platform extension)
Get Transformation Kappa2D (cli, bundled in Chest Imaging Platform extension)
Get Transformation Similarity Metric (cli, bundled in Chest Imaging Platform extension)
Gradient Anisotropic Diffusion (cli, built-in)
Graph Cuts Optimization (cli, bundled in Chest Imaging Platform extension)
Grayscale Fill Hole Image Filter (cli, built-in)
Grayscale Grind Peak Image Filter (cli, built-in)
Grayscale Model Maker (cli, built-in)
Growing (cli, bundled in CMFreg extension)
Histogram Matching (cli, built-in)
IASEMImport (cli, bundled in IASEM extension)
IASEMImport Series (cli, bundled in IASEM extension)
Image Label Combine (cli, built-in)
Image Maker (cli, bundled in Image Maker extension)
Intensity Difference Metric (cli, bundled in Change Tracker extension)
Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
Island Removal (cli, built-in)
itkimage2paramap (cli, bundled in DCMQI extension)
itkimage2segimage (cli, bundled in DCMQI extension)
Label Addition (cli, bundled in CMFreg extension)
Label Extraction (cli, bundled in CMFreg extension)
Label Map From Region And Type Points (cli, bundled in Chest Imaging Platform extension)
Label Map Smoothing (cli, built-in)
Label Particles By Chest Region Chest Type (cli, bundled in Chest Imaging Platform extension)
LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
Mask Creation (cli, bundled in CMFreg extension)
Mask Out Label Map Structures (cli, bundled in Chest Imaging Platform extension)
Mask Scalar Volume (cli, built-in)
Matlab Commander (cli, bundled in Matlab Bridge extension)
Median Image Filter (cli, built-in)
Merge Chest Label Maps (cli, bundled in Chest Imaging Platform extension)
Merge Models (cli, built-in)
Merge Particle Data Sets (cli, bundled in Chest Imaging Platform extension)
Mesh To Label Map (cli, bundled in Mesh To Label Map extension)
Model Maker (cli, built-in)
Model To Label Map (cli, built-in)
Model To Model Distance (cli, bundled in Model To Model Distance extension)
Multiply Scalar Volumes (cli, built-in)
N4ITKBias Field Correction (cli, built-in)
Non Growing (cli, bundled in CMFreg extension)
Orient Scalar Volume (cli, built-in)
Otsu Threshold Image Filter (cli, built-in)
paramap2itkimage (cli, bundled in DCMQI extension)
PBNRR (cli, bundled in PBNRR extension)
Perform Metric Test (cli, built-in)
Perform Morphological (cli, bundled in Chest Imaging Platform extension)
Perturb Particles (cli, bundled in Chest Imaging Platform extension)
PETLiver Uptake Measurement (cli, bundled in PETLiver Uptake Measurement extension)
PETStandard Uptake Value Computation (cli, built-in)
PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
Pk Modeling (cli, bundled in Pk Modeling extension)
plastimatch slicer bspline (cli, bundled in Slicer RT extension)
plastimatch slicer landwarp (cli, bundled in Slicer RT extension)
Probe Volume With Model (cli, built-in)
Quad Edge Surface Mesher (cli, bundled in Slicer Prostate extension)
Quality Control (cli, bundled in Chest Imaging Platform extension)
Quantitative Indices CLI (cli, bundled in PET-Indi C extension)
Read Dicom Write Tags (cli, bundled in Chest Imaging Platform extension)
Read NRRDs Write VTK (cli, bundled in Chest Imaging Platform extension)
Read Vida Write CIP (cli, bundled in Chest Imaging Platform extension)
Read VTKWrite NRRDs (cli, bundled in Chest Imaging Platform extension)
Read Write Image Data (cli, bundled in Chest Imaging Platform extension)
Read Write Region And Type Points (cli, bundled in Chest Imaging Platform extension)
Region Type Locations To ROIVolume (cli, bundled in Chest Imaging Platform extension)
Register CT (cli, bundled in Chest Imaging Platform extension)
Register Label Maps (cli, bundled in Chest Imaging Platform extension)
Register Lung Atlas (cli, bundled in Chest Imaging Platform extension)
Remap Label Map (cli, bundled in Chest Imaging Platform extension)
Remove Chest Type From Label Map Using Particles (cli, bundled in Chest Imaging Platform extension)
Remove Particles From Particles Data Set (cli, bundled in Chest Imaging Platform extension)
Resample CT (cli, bundled in Chest Imaging Platform extension)
Resample DTIlog Euclidean (cli, bundled in Resample DTIlog Euclidean extension)
Resample DTIVolume (cli, built-in)
Resample Label Map (cli, bundled in Chest Imaging Platform extension)
Resample Scalar Vector DWIVolume (cli, built-in)
Resample Scalar Volume (cli, built-in)
Rescale Label Map (cli, bundled in Chest Imaging Platform extension)
ROBEXBrain Extraction (cli, bundled in ROBEXBrain Extraction extension)
Robust Statistics Segmenter (cli, built-in)
Scan Convert Curvilinear Array (cli, bundled in Slicer ITKUltrasound extension)
Scan Convert Phased Array3D (cli, bundled in Slicer ITKUltrasound extension)
Scan Convert Slice Series (cli, bundled in Slicer ITKUltrasound extension)
Scattered Transform (cli, bundled in Scattered Transform extension)
SEG2NRRD (cli)
segimage2itkimage (cli, bundled in DCMQI extension)
Segmentation Smoothing (cli, bundled in Slicer Prostate extension)
Segment Lung Airways (cli, bundled in Chest Imaging Platform extension)
Segment Lung Lobes (cli, bundled in Chest Imaging Platform extension)
Simple Region Growing Segmentation (cli, built-in)
Skull Stripper (cli, bundled in Skull Stripper extension)
Sobolev Segmenter (cli, bundled in Sobolev Segmenter extension)
Spacing Aware Curvature Diffusion (cli, bundled in IASEM extension)
Split Left Lung Right Lung (cli, bundled in Chest Imaging Platform extension)
Subtract Scalar Volumes (cli, built-in)
SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
Swiss Skull Stripper (cli, bundled in Swiss Skull Stripper extension)
T1Mapping (cli, bundled in T1Mapping extension)
Test Grid Transform Registration (cli, built-in)
Threshold Scalar Volume (cli, built-in)
tid1500reader (cli, bundled in DCMQI extension)
tid1500writer (cli, bundled in DCMQI extension)
Tractography Label Map Seeding (cli, bundled in Slicer DMRI extension)
Transfer Region And Type Indices To From Points (cli, bundled in Chest Imaging Platform extension)
UKFTractography (cli, bundled in UKFTractography extension)
VBRAINSDemon Warp (cli, built-in)
Voting Binary Hole Filling Image Filter (cli, built-in)
VTK to DICOMTract (cli, bundled in Slicer DMRI extension)
ZFrame Calibration (cli, bundled in Slice Tracker extension)

loadable

Airway Inspector (loadable, bundled in Chest Imaging Platform extension)
Annotations (loadable, built-in)
Astro Modeling (loadable, bundled in Slicer Astro extension)
Astro Smoothing (loadable, bundled in Slicer Astro extension)
Astro Volume (loadable, bundled in Slicer Astro extension)
Astro Welcome (loadable, bundled in Slicer Astro extension)
Beams (loadable, bundled in Slicer RT extension)
Breach Warning (loadable, bundled in Slicer IGT extension)
Cameras (loadable, built-in)
Carrera Slice (loadable, bundled in Carrera Slice extension)
Collect Fiducials (loadable, bundled in Slicer IGT extension)
Colors (loadable, built-in)
Create Models (loadable, bundled in Slicer IGT extension)
Crop Volume (loadable, built-in)
Data (loadable, built-in)
Data Store (loadable, built-in)
Dice Computation (loadable, bundled in Dice Computation extension)
Dicom Rt Import Export (loadable, bundled in Slicer RT extension)
Dicom Sro Import (loadable, bundled in Slicer RT extension)
Dose Accumulation (loadable, bundled in Slicer RT extension)
Dose Comparison (loadable, bundled in Slicer RT extension)
Dose Morphology (loadable, bundled in Margin Calculator extension)
Dose Volume Histogram (loadable, bundled in Slicer RT extension)
Double Arrays (loadable, built-in)
EMSegment (loadable, built-in)
EMSegment Quick (loadable, built-in)
External Beam Planning (loadable, bundled in Slicer RT extension)
Fast Grow Cut (loadable, bundled in Fast Grow Cut Effect extension)
Fast Grow Cut Segmenter (loadable, bundled in Carrera Slice extension)
Fiducial Registration Wizard (loadable, bundled in Slicer IGT extension)
Gel Dosimetry Analysis Algo (loadable, bundled in Gel Dosimetry Analysis extension)
Graph Cut Interactive Segmenter (loadable, bundled in Graph Cut Segment extension)
Isodose (loadable, bundled in Slicer RT extension)
Markups (loadable, built-in)
Markups To Model (loadable, bundled in Slicer IGT extension)
Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
Metafile Importer (loadable, bundled in Sequences extension)
Models (loadable, built-in)
Multi Volume Explorer (loadable, built-in)
Open CV (loadable, bundled in Slicer Open CV extension)
Open IGTLink IF (loadable, built-in)
Open IGTLink Remote (loadable, bundled in Slicer IGT extension)
Particles Display (loadable, bundled in Chest Imaging Platform extension)
Path Explorer (loadable, bundled in Slicer IGT extension)
Perk Evaluator (loadable, bundled in Perk Tutor extension)
PETTumor Segmentation (loadable, bundled in PETTumor Segmentation extension)
Pivot Calibration (loadable, bundled in Slicer IGT extension)
Planar Image (loadable, bundled in Slicer RT extension)
Plastimatch Py (loadable, bundled in Slicer RT extension)
Quick TCGA (loadable, bundled in Slicer Pathology extension)
Reformat (loadable, built-in)
Region Type (loadable, bundled in Chest Imaging Platform extension)
Scene Views (loadable, built-in)
Segmentations (loadable, built-in)
Segment Comparison (loadable, bundled in Slicer RT extension)
Segment Morphology (loadable, bundled in Slicer RT extension)
Sequence Browser (loadable, bundled in Sequences extension)
Sequences (loadable, bundled in Sequences extension)
Short Cut Core (loadable, bundled in Slicer Pathology extension)
Subject Hierarchy (loadable, built-in)
Tables (loadable, built-in)
Terminologies (loadable, built-in)
Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)
Tractography Display (loadable, bundled in Slicer DMRI extension)
Tractography Interactive Seeding (loadable, bundled in Slicer DMRI extension)
Transform Fusion (loadable, bundled in Slicer IGT extension)
Transform Recorder (loadable, bundled in Perk Tutor extension)
Transforms (loadable, built-in)
Ultrasound Snapshots (loadable, bundled in Slicer IGT extension)
Units (loadable, built-in)
Vff File Reader (loadable, bundled in Slicer RT extension)
View Controllers (loadable, built-in)
Volume Rendering (loadable, built-in)
Volume Reslice Driver (loadable, bundled in Slicer IGT extension)
Volumes (loadable, built-in)
Watchdog (loadable, bundled in Slicer IGT extension)
Welcome (loadable, built-in)
Workflow Segmentation (loadable, bundled in Perk Tutor extension)

scripted

Airway Segmentation (scripted, bundled in Airway Segmentation extension)
Angle Planes (scripted, bundled in Shape Quantifier extension)
Astro Sample Data (scripted, bundled in Slicer Astro extension)
Batch Structure Set Conversion (scripted, bundled in Slicer RT extension)
Binary Watershed Effect (scripted, bundled in IASEM extension)
Cardiac Agatston Measures (scripted, bundled in Cardiac Agatston Measures extension)
Carrera Slice Effect (scripted, bundled in Carrera Slice extension)
Centerline Computation (scripted, bundled in VMTK extension)
Change Tracker (scripted, bundled in Change Tracker extension)
Charting (scripted, built-in)
CIP (scripted, bundled in Chest Imaging Platform extension)
CIP Body Composition (scripted, bundled in Chest Imaging Platform extension)
CIP Calcium Scoring (scripted, bundled in Chest Imaging Platform extension)
CIP Common (scripted, bundled in Chest Imaging Platform extension)
CIP Interactive Lobe Segmentation (scripted, bundled in Chest Imaging Platform extension)
CIP Lesion Model (scripted, bundled in Chest Imaging Platform extension)
CIP MIPViewer (scripted, bundled in Chest Imaging Platform extension)
CIP PAARatio (scripted, bundled in Chest Imaging Platform extension)
CIP Parenchyma Analysis (scripted, bundled in Chest Imaging Platform extension)
CIP Parenchyma Subtype Training (scripted, bundled in Chest Imaging Platform extension)
CIP Points Labelling (scripted, bundled in Chest Imaging Platform extension)
CIP Trachea Stent Planning (scripted, bundled in Chest Imaging Platform extension)
CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
Compare Volumes (scripted, built-in)
Corner Annotation (scripted, bundled in Corner Annotation extension)
Curve Maker (scripted, bundled in Curve Maker extension)
Database Interactor (scripted, bundled in Database Interactor extension)
Database Interactor Lib (scripted, bundled in Database Interactor extension)
Data Probe (scripted, built-in)
Deep Infer (scripted, bundled in Deep Infer extension)
Developer Tools For Extensions (scripted, bundled in Developer Tools For Extensions extension)
DICOM (scripted, built-in)
DICOM2Full Brain Tractography (scripted, bundled in Slicer DMRI extension)
DICOMPatcher (scripted, built-in)
Dicom Sro Export (scripted, bundled in Slicer RT extension)
Distance Map Based Registration (scripted, bundled in Slicer Prostate extension)
DMRIInstall (scripted, built-in)
Double Threshold Effect (scripted, bundled in IASEM extension)
d Pet Brain Quantification (scripted, bundled in Pet Spect Analysis extension)
Dvh Comparison (scripted, bundled in Slicer RT extension)
Easy Clip (scripted, bundled in Easy Clip extension)
Editor (scripted, built-in)
Endoscopy (scripted, built-in)
Extension Stats (scripted, bundled in Developer Tools For Extensions extension)
Extension Wizard (scripted, built-in)
Fast Grow Cut Effect (scripted, bundled in Fast Grow Cut Effect extension)
Fiber Bundle To Label Map (scripted, bundled in Slicer DMRI extension)
Fiducials To Model Registration (scripted, bundled in Slicer IGT extension)
Film Dosimetry Analysis (scripted, bundled in Film Dosimetry Analysis extension)
Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)
Gyro Guide (scripted, bundled in Gyro Guide extension)
Heterogeneity CAD (scripted, bundled in Open CAD extension)
i Gyne (scripted, bundled in i Gyne extension)
KUtil (scripted, bundled in Carrera Slice extension)
Label Object Statistics (scripted, bundled in IASEM extension)
Label Statistics (scripted, built-in)
Landmark Registration (scripted, built-in)
LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
Level Set Segmentation (scripted, bundled in VMTK extension)
Margin Calculator (scripted, bundled in Margin Calculator extension)
Mesh Statistics (scripted, bundled in Mesh Statistics Extension extension)
Model Registration (scripted, bundled in Slicer IGT extension)
mp Review (scripted, bundled in mp Review extension)
mp Review Preprocessor (scripted, bundled in mp Review extension)
Multi Volume Importer (scripted, built-in)
Needle Finder (scripted, bundled in Needle Finder extension)
Node Info (scripted, bundled in Debugging Tools extension)
Node Modified Statistics (scripted, bundled in Debugging Tools extension)
Nsg Plan Tracto (scripted, bundled in Slicer DMRI extension)
PETIndi C (scripted, bundled in PET-Indi C extension)
PETTumor Segmentation Effect (scripted, bundled in PETTumor Segmentation extension)
Philips4d Us Dicom Patcher (scripted, bundled in Slicer Heart extension)
Pick And Paint (scripted, bundled in Pick And Paint Extension extension)
Plm Register (scripted, bundled in Slicer RT extension)
Plus Model Catalog Browser (scripted, bundled in Slicer IGT extension)
Plus Remote (scripted, bundled in Slicer IGT extension)
Py Dev Remote Debug (scripted, bundled in Debugging Tools extension)
Python Metrics Calculator (scripted, bundled in Perk Tutor extension)
Q3DC (scripted, bundled in Q3DC extension)
Quantitative Indices Tool (scripted, bundled in PET-Indi C extension)
Quantitative Reporting (scripted, bundled in Quantitative Reporting extension)
Quick TCGAEffect (scripted, bundled in Slicer Pathology extension)
Resection Volume (scripted, bundled in Resection Planner extension)
Sample Data (scripted, built-in)
Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)
Scene Performance (scripted, built-in)
Scoliosis Monitoring (scripted, bundled in Scoliosis extension)
Screen Capture (scripted, built-in)
Segment CAD (scripted, bundled in Open CAD extension)
Segment Editor (scripted, built-in)
Segment Editor Fast Marching (scripted, bundled in Segment Editor Extra Effects extension)
Segment Editor Flood Filling (scripted, bundled in Segment Editor Extra Effects extension)
Segment Editor PETTumor (scripted, bundled in PETTumor Segmentation extension)
Segment Editor Watershed (scripted, bundled in Segment Editor Extra Effects extension)
Segment Statistics (scripted, built-in)
Shape Quantifier (scripted, bundled in Shape Quantifier extension)
Shape Quantifier Core (scripted, bundled in Shape Quantifier extension)
Short Cut Effect (scripted, bundled in Slicer Pathology extension)
Simple Filters (scripted, built-in)
Slice Link Logic (scripted, built-in)
Slicer4Minute (scripted, built-in)
Slicer Astro Data Probe (scripted, bundled in Slicer Astro extension)
Slicer Pathology (scripted, bundled in Slicer Pathology extension)
Slicer Prostate (scripted, bundled in Slicer Prostate extension)
Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
Slice Tracker (scripted, bundled in Slice Tracker extension)
Slice Tracker Registration (scripted, bundled in Slice Tracker extension)
Slice Tracker ZFrame Registration (scripted, bundled in Slice Tracker extension)
Spinal Curvature Measurement (scripted, bundled in Scoliosis extension)
Surface Registration (scripted, bundled in CMFreg extension)
Surface Toolbox (scripted, built-in)
Synthetic RTDose (scripted, bundled in Margin Calculator extension)
TCIABrowser (scripted, bundled in TCIABrowser extension)
Texture Model (scripted, bundled in Slicer IGT extension)
Valve View (scripted, bundled in Slicer Heart extension)
Vector To Scalar Volume (scripted, built-in)
Vesselness Filtering (scripted, bundled in VMTK extension)
Viewpoint (scripted, bundled in Slicer IGT extension)
Volume Clip To Label (scripted, bundled in Slice Tracker extension)
Volume Clip With Model (scripted, bundled in Volume Clip extension)
Volume Clip With Roi (scripted, bundled in Volume Clip extension)
Volume Rendering Scene Close (scripted, built-in)
Wasp (scripted, bundled in Wasp extension)
Window Level Effect (scripted, bundled in Window Level Effect extension)
Xnat Slicer (scripted, bundled in XNATSlicer extension)

Difference between revisions of "Documentation/Nightly/ModuleExtensionListing/Modules by type"

Revision as of 21:08, 18 April 2017

Modules by type

cli

loadable

scripted

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@@ Line 13: / Line 13: @@
 * [[Documentation/Nightly/Extensions/CMFreg|Apply Matrix]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 * [[Documentation/Nightly/Extensions/IASEM|Bin Shrink]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
+* [[Documentation/Nightly/Extensions/OpenCVExample|Blend Vector Volumes]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/OpenCVExample|Open CVExample]] extension)</small>
 * [[Documentation/Nightly/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 * [[Documentation/Nightly/Modules/BRAINSDemonWarp|BRAINSDemon Warp]]    <small>(cli, built-in)</small>
@@ Line 49: / Line 50: @@
 * [http://www.chestimagingplatform.org Crop Lung]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 * [[Documentation/Nightly/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]]    <small>(cli, built-in)</small>
-* [[Documentation/Nightly/Modules/DiffusionTensorScalarMeasurements|Diffusion Tensor Scalar Measurements]]    <small>(cli, built-in)</small>
+* [[Documentation/Nightly/Extensions/SlicerDMRI|DICOMTract to VTK]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|Slicer DMRI]] extension)</small>
+* [[Documentation/Nightly/Modules/DiffusionTensorScalarMeasurements|Diffusion Tensor Scalar Measurements]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|Slicer DMRI]] extension)</small>
 * Diffusion Tensor Test    <small>(cli, built-in)</small>
-* [[Documentation/Nightly/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]]    <small>(cli, built-in)</small>
+* [[Documentation/Nightly/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|Slicer DMRI]] extension)</small>
 * [[Documentation/Nightly/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 * [http://slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/DSC_MRI_Analysis DSCMRIAnalysis]    <small>(cli, bundled in [http://slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/DSC_MRI_Analysis DSCMRIAnalysis] extension)</small>
+* Dump SEGFrame    <small>(cli)</small>
 * DWIConvert    <small>(cli, built-in)</small>
-* [[Documentation/Nightly/Modules/DWIToDTIEstimation|DWITo DTIEstimation]]    <small>(cli, built-in)</small>
+* [[Documentation/Nightly/Modules/DWIToDTIEstimation|DWITo DTIEstimation]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|Slicer DMRI]] extension)</small>
 * [[Documentation/Nightly/Modules/DWModeling|DWModeling]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerProstate|Slicer Prostate]] extension)</small>
 * EMSegment Command Line    <small>(cli, built-in)</small>
 * EMSegment Transform To New Format    <small>(cli, built-in)</small>
-* [[Documentation/Nightly/Modules/EncodeSEG|Encode SEG]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/Reporting|Reporting]] extension)</small>
+* [[Documentation/Nightly/Modules/EncodeSEG|Encode SEG]]    <small>(cli)</small>
 * [http://www.chestimagingplatform.org Enhance Fissures In Image]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 * [http://www.chestimagingplatform.org Evaluate Lung Lobe Segmentation Results]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
@@ Line 69: / Line 72: @@
 * [http://www.chestimagingplatform.org Extract Particles From Chest Region Chest Type]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 * [[Documentation/Nightly/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli, built-in)</small>
-* Fiber Bundle Label Select    <small>(cli, built-in)</small>
+* [[Documentation/Nightly/Modules/FiberBundleLabelSelect|Fiber Bundle Label Select]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|Slicer DMRI]] extension)</small>
-* Fiber Post Process    <small>(cli, built-in)</small>
+* [[Documentation/Nightly/Modules/FiberTractMeasurements|Fiber Tract Measurements]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|Slicer DMRI]] extension)</small>
-* [[Documentation/Nightly/Modules/FiberTractMeasurements|Fiber Tract Measurements]]    <small>(cli, built-in)</small>
 * [[Documentation/Nightly/Modules/FiducialRegistration|Fiducial Registration]]    <small>(cli, built-in)</small>
 * [http://www.chestimagingplatform.org Filter Airway Particle Data]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
@@ Line 78: / Line 80: @@
 * [http://www.chestimagingplatform.org Filter Vessel Particle Data]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 * [http://www.chestimagingplatform.org Find Patch Match]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
-* [[Documentation/Nightly/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
-* [[Documentation/Nightly/Modules/FinslerTractography|Finsler Tractography]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 * [http://www.chestimagingplatform.org Fit Lobe Surface Models To Particle Data]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 * [[Documentation/Nightly/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]]    <small>(cli, built-in)</small>
@@ Line 89: / Line 89: @@
 * [http://www.chestimagingplatform.org Generate Lobe Surface Models]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 * [http://www.chestimagingplatform.org Generate Median Filtered Image]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
+* [http://www.chestimagingplatform.org Generate Model]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 * [http://www.chestimagingplatform.org Generate NLMFiltered Image]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 * [http://www.chestimagingplatform.org Generate Otsu Lung Cast]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 * [http://www.chestimagingplatform.org Generate Overlay Images]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
+* [http://www.chestimagingplatform.org Generate Parenchyma Phenotypes]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 * [http://www.chestimagingplatform.org Generate Partial Lung Label Map]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
-* [http://www.chestimagingplatform.org Generate Region Histograms And Parenchyma Phenotypes]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
+* [http://www.chestimagingplatform.org Generate Simple Lung Mask]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 * [http://www.chestimagingplatform.org Generate Stenciled Label Map From Particles]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 * [http://www.chestimagingplatform.org Get Structures In Label Map]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
@@ Line 100: / Line 102: @@
 * [http://www.chestimagingplatform.org Get Transformation Similarity Metric]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 * [[Documentation/Nightly/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]]    <small>(cli, built-in)</small>
+* [http://www.chestimagingplatform.org Graph Cuts Optimization]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 * [[Documentation/Nightly/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]]    <small>(cli, built-in)</small>
 * [[Documentation/Nightly/Modules/GrayscaleGrindPeakImageFilter|Grayscale Grind Peak Image Filter]]    <small>(cli, built-in)</small>
@@ Line 112: / Line 115: @@
 * [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small>
 * Island Removal    <small>(cli, built-in)</small>
+* [[Documentation/Nightly/Extensions/DCMQI|itkimage2paramap]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DCMQI|DCMQI]] extension)</small>
+* [[Documentation/Nightly/Extensions/DCMQI|itkimage2segimage]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DCMQI|DCMQI]] extension)</small>
 * [[Documentation/Nightly/Modules/LabelAddition|Label Addition]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 * [[Documentation/Nightly/Modules/LabelExtraction|Label Extraction]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
@@ Line 126: / Line 131: @@
 * [[Documentation/Nightly/Modules/MergeModels|Merge Models]]    <small>(cli, built-in)</small>
 * [http://www.chestimagingplatform.org Merge Particle Data Sets]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
-* [[Documentation/Nightly/Modules/MeshCompression|Mesh Compression]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 * [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]] extension)</small>
 * [[Documentation/Nightly/Modules/ModelMaker|Model Maker]]    <small>(cli, built-in)</small>
@@ Line 136: / Line 140: @@
 * [[Documentation/Nightly/Modules/OrientScalarVolume|Orient Scalar Volume]]    <small>(cli, built-in)</small>
 * [[Documentation/Nightly/Modules/OtsuThresholdImageFilter|Otsu Threshold Image Filter]]    <small>(cli, built-in)</small>
+* [[Documentation/Nightly/Extensions/DCMQI|paramap2itkimage]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DCMQI|DCMQI]] extension)</small>
 * [[Documentation/Nightly/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] extension)</small>
 * Perform Metric Test    <small>(cli, built-in)</small>
 * [http://www.chestimagingplatform.org Perform Morphological]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 * [http://www.chestimagingplatform.org Perturb Particles]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
+* [[Documentation/Nightly/Modules/PETLiverUptakeMeasurement|PETLiver Uptake Measurement]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/PETLiverUptakeMeasurement|PETLiver Uptake Measurement]] extension)</small>
 * [[Documentation/Nightly/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]]    <small>(cli, built-in)</small>
 * [[Documentation/Nightly/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
@@ Line 169: / Line 175: @@
 * [[Documentation/Nightly/Modules/ResampleScalarVolume|Resample Scalar Volume]]    <small>(cli, built-in)</small>
 * [http://www.chestimagingplatform.org Rescale Label Map]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
+* [[Documentation/Nightly/Modules/ROBEXBrainExtraction|ROBEXBrain Extraction]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/ROBEXBrainExtraction|ROBEXBrain Extraction]] extension)</small>
 * [[Documentation/Nightly/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli, built-in)</small>
-* [[Documentation/Nightly/Modules/SEG2NRRD|SEG2NRRD]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/Reporting|Reporting]] extension)</small>
+* [https://kitwaremedical.github.io/SlicerITKUltrasoundDoc/ Scan Convert Curvilinear Array]    <small>(cli, bundled in [https://kitwaremedical.github.io/SlicerITKUltrasoundDoc/ Slicer ITKUltrasound] extension)</small>
+* [https://kitwaremedical.github.io/SlicerITKUltrasoundDoc/ Scan Convert Phased Array3D]    <small>(cli, bundled in [https://kitwaremedical.github.io/SlicerITKUltrasoundDoc/ Slicer ITKUltrasound] extension)</small>
+* [https://kitwaremedical.github.io/SlicerITKUltrasoundDoc/ Scan Convert Slice Series]    <small>(cli, bundled in [https://kitwaremedical.github.io/SlicerITKUltrasoundDoc/ Slicer ITKUltrasound] extension)</small>
+* [[Documentation/Nightly/Extensions/ScatteredTransform|Scattered Transform]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/ScatteredTransform|Scattered Transform]] extension)</small>
+* [[Documentation/Nightly/Modules/SEG2NRRD|SEG2NRRD]]    <small>(cli)</small>
+* [[Documentation/Nightly/Extensions/DCMQI|segimage2itkimage]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DCMQI|DCMQI]] extension)</small>
 * [[Documentation/Nightly/Modules/SegmentationSmoothing|Segmentation Smoothing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerProstate|Slicer Prostate]] extension)</small>
+* [http://www.chestimagingplatform.org Segment Lung Airways]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 * [http://www.chestimagingplatform.org Segment Lung Lobes]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 * [[Documentation/Nightly/Modules/SimpleRegionGrowingSegmentation|Simple Region Growing Segmentation]]    <small>(cli, built-in)</small>
 * [[Documentation/Nightly/Modules/SkullStripper|Skull Stripper]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SkullStripper|Skull Stripper]] extension)</small>
+* [[Documentation/Nightly/Modules/SobolevSegmenter|Sobolev Segmenter]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SobolevSegmenter|Sobolev Segmenter]] extension)</small>
 * [[Documentation/Nightly/Extensions/IASEM|Spacing Aware Curvature Diffusion]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
 * [http://www.chestimagingplatform.org Split Left Lung Right Lung]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
@@ Line 183: / Line 197: @@
 * Test Grid Transform Registration    <small>(cli, built-in)</small>
 * [[Documentation/Nightly/Modules/ThresholdScalarVolume|Threshold Scalar Volume]]    <small>(cli, built-in)</small>
-* [[Documentation/Nightly/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]]    <small>(cli, built-in)</small>
+* [[Documentation/Nightly/Extensions/DCMQI|tid1500reader]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DCMQI|DCMQI]] extension)</small>
+* [[Documentation/Nightly/Extensions/DCMQI|tid1500writer]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/DCMQI|DCMQI]] extension)</small>
+* [[Documentation/Nightly/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|Slicer DMRI]] extension)</small>
 * [http://www.chestimagingplatform.org Transfer Region And Type Indices To From Points]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 * [[Documentation/Nightly/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/UKFTractography|UKFTractography]] extension)</small>
 * VBRAINSDemon Warp    <small>(cli, built-in)</small>
 * [[Documentation/Nightly/Modules/VotingBinaryHoleFillingImageFilter|Voting Binary Hole Filling Image Filter]]    <small>(cli, built-in)</small>
+* [[Documentation/Nightly/Extensions/SlicerDMRI|VTK to DICOMTract]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|Slicer DMRI]] extension)</small>
+* [[Documentation/Nightly/Extensions/SliceTracker|ZFrame Calibration]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/SliceTracker|Slice Tracker]] extension)</small>
 == loadable ==
 * [http://www.chestimagingplatform.org Airway Inspector]    <small>(loadable, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 * [[Documentation/Nightly/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
+* [[Documentation/Nightly/Modules/AstroModeling|Astro Modeling]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerAstro|Slicer Astro]] extension)</small>
+* [[Documentation/Nightly/Modules/AstroSmoothing|Astro Smoothing]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerAstro|Slicer Astro]] extension)</small>
+* [[Documentation/Nightly/Modules/AstroVolume|Astro Volume]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerAstro|Slicer Astro]] extension)</small>
+* [[Documentation/Nightly/Extensions/SlicerAstro|Astro Welcome]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerAstro|Slicer Astro]] extension)</small>
 * [[Documentation/Nightly/Extensions/SlicerRT|Beams]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 * [[Documentation/Nightly/Extensions/SlicerIGT|Breach Warning]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
@@ Line 207: / Line 229: @@
 * [[Documentation/Nightly/Modules/DoseComparison|Dose Comparison]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 * [[Documentation/Nightly/Extensions/MarginCalculator|Dose Morphology]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
-* [[Documentation/Nightly/Extensions/MarginCalculator|Dose Population Histogram]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
 * [[Documentation/Nightly/Modules/DoseVolumeHistogram|Dose Volume Histogram]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 * Double Arrays    <small>(loadable, built-in)</small>
 * [[Documentation/Nightly/Modules/EMSegment|EMSegment]]    <small>(loadable, built-in)</small>
 * EMSegment Quick    <small>(loadable, built-in)</small>
+* [[Documentation/Nightly/Extensions/SlicerRT|External Beam Planning]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 * [[Documentation/Nightly/Modules/FastGrowCut|Fast Grow Cut]]    <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small>
 * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
@@ Line 223: / Line 245: @@
 * [[Documentation/Nightly/Extensions/Sequences|Metafile Importer]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/Sequences|Sequences]] extension)</small>
 * [[Documentation/Nightly/Modules/Models|Models]]    <small>(loadable, built-in)</small>
-* [[Documentation/Nightly/Extensions/MarginCalculator|Motion Simulator]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
-* [[Documentation/Nightly/Extensions/MarginCalculator|Motion Simulator Double Array]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
 * [[Documentation/Nightly/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
+* [[Documentation/Nightly/Extensions/SlicerOpenCV|Open CV]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerOpenCV|Slicer Open CV]] extension)</small>
 * [[Documentation/Nightly/Modules/OpenIGTLinkIF|Open IGTLink IF]]    <small>(loadable, built-in)</small>
 * [[Documentation/Nightly/Modules/OpenIGTLinkRemote|Open IGTLink Remote]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 * [http://www.chestimagingplatform.org Particles Display]    <small>(loadable, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 * [[Documentation/Nightly/Modules/PathExplorer|Path Explorer]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
+* [[Documentation/Nightly/Modules/PerkEvaluator|Perk Evaluator]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 * [[Documentation/Nightly/Extensions/PETTumorSegmentation|PETTumor Segmentation]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PETTumorSegmentation|PETTumor Segmentation]] extension)</small>
 * [[Documentation/Nightly/Extensions/SlicerIGT|Pivot Calibration]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 * [[Documentation/Nightly/Extensions/SlicerRT|Planar Image]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 * [[Documentation/Nightly/Extensions/SlicerRT|Plastimatch Py]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
+* [[Documentation/Nightly/Extensions/SlicerPathology|Quick TCGA]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerPathology|Slicer Pathology]] extension)</small>
 * [[Documentation/Nightly/Modules/Reformat|Reformat]]    <small>(loadable, built-in)</small>
 * [http://www.chestimagingplatform.org Region Type]    <small>(loadable, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 * [[Documentation/Nightly/Modules/SceneViews|Scene Views]]    <small>(loadable, built-in)</small>
-* [[Documentation/Nightly/Modules/Segmentations|Segmentations]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
+* [[Documentation/Nightly/Modules/Segmentations|Segmentations]]    <small>(loadable, built-in)</small>
 * [[Documentation/Nightly/Modules/SegmentComparison|Segment Comparison]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 * [[Documentation/Nightly/Modules/SegmentMorphology|Segment Morphology]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 * [[Documentation/Nightly/Extensions/Sequences|Sequence Browser]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/Sequences|Sequences]] extension)</small>
 * [[Documentation/Nightly/Extensions/Sequences|Sequences]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/Sequences|Sequences]] extension)</small>
+* [[Documentation/Nightly/Extensions/SlicerPathology|Short Cut Core]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerPathology|Slicer Pathology]] extension)</small>
 * [[Documentation/Nightly/Modules/SubjectHierarchy|Subject Hierarchy]]    <small>(loadable, built-in)</small>
 * [[Documentation/Nightly/Modules/Tables|Tables]]    <small>(loadable, built-in)</small>
+* Terminologies    <small>(loadable, built-in)</small>
 * [[Documentation/Nightly/Modules/TrackerStabilizer|Tracker Stabilizer]]    <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/TrackerStabilizer Tracker Stabilizer] extension)</small>
-* [[Documentation/Nightly/Modules/TractographyDisplay|Tractography Display]]    <small>(loadable, built-in)</small>
+* [[Documentation/Nightly/Modules/TractographyDisplay|Tractography Display]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|Slicer DMRI]] extension)</small>
-* Tractography Interactive Seeding    <small>(loadable, built-in)</small>
+* [[Documentation/Nightly/Modules/TractographyInteractiveSeeding|Tractography Interactive Seeding]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|Slicer DMRI]] extension)</small>
 * [[Documentation/Nightly/Extensions/SlicerIGT|Transform Fusion]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
+* [[Documentation/Nightly/Modules/TransformRecorder|Transform Recorder]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 * [[Documentation/Nightly/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 * [[Documentation/Nightly/Extensions/SlicerIGT|Ultrasound Snapshots]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
@@ Line 258: / Line 284: @@
 * [[Documentation/Nightly/Modules/Watchdog|Watchdog]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 * [[Documentation/Nightly/Modules/Welcome|Welcome]]    <small>(loadable, built-in)</small>
+* [[Documentation/Nightly/Modules/WorkflowSegmentation|Workflow Segmentation]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 == scripted ==
 * [[Documentation/Nightly/Modules/AirwaySegmentation|Airway Segmentation]]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation] extension)</small>
-* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AnglePlanes Angle Planes]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AnglePlanes Angle Planes Extension] extension)</small>
+* [[Documentation/Nightly/Modules/AnglePlanes|Angle Planes]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ShapeQuantifier|Shape Quantifier]] extension)</small>
+* [[Documentation/Nightly/Extensions/SlicerAstro|Astro Sample Data]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerAstro|Slicer Astro]] extension)</small>
 * [[Documentation/Nightly/Extensions/SlicerRT|Batch Structure Set Conversion]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 * [[Documentation/Nightly/Extensions/IASEM|Binary Watershed Effect]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
-* [https://github.com/SlicerIGT/LumpNav Breach Warning Light]    <small>(scripted, bundled in [https://github.com/SlicerIGT/LumpNav Lump Nav] extension)</small>
 * [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures]    <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures] extension)</small>
 * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice Effect]    <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
@@ Line 269: / Line 296: @@
 * [[Documentation/Nightly/Modules/ChangeTracker|Change Tracker]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 * Charting    <small>(scripted, built-in)</small>
+* [http://www.chestimagingplatform.org CIP ]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 * [http://www.chestimagingplatform.org CIP Body Composition]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
+* [http://www.chestimagingplatform.org CIP Calcium Scoring]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 * [http://www.chestimagingplatform.org CIP Common]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
+* [http://www.chestimagingplatform.org CIP Interactive Lobe Segmentation]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 * [http://www.chestimagingplatform.org CIP Lesion Model]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 * [http://www.chestimagingplatform.org CIP MIPViewer]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 * [http://www.chestimagingplatform.org CIP PAARatio]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
+* [http://www.chestimagingplatform.org CIP Parenchyma Analysis]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 * [http://www.chestimagingplatform.org CIP Parenchyma Subtype Training]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
+* [http://www.chestimagingplatform.org CIP Points Labelling]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 * [http://www.chestimagingplatform.org CIP Trachea Stent Planning]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
@@ Line 282: / Line 314: @@
 * [[Documentation/Nightly/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 * [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]] extension)</small>
+* [[Documentation/Nightly/Modules/DatabaseInteractor|Database Interactor]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/DatabaseInteractor|Database Interactor]] extension)</small>
+* [[Documentation/Nightly/Extensions/DatabaseInteractor|Database Interactor Lib]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/DatabaseInteractor|Database Interactor]] extension)</small>
 * [[Documentation/Nightly/Modules/DataProbe|Data Probe]]    <small>(scripted, built-in)</small>
+* [[Documentation/Nightly/Modules/DeepInfer|Deep Infer]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/DeepInfer|Deep Infer]] extension)</small>
 * [[Documentation/Nightly/Modules/DeveloperToolsForExtensions|Developer Tools For Extensions]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/DeveloperToolsForExtensions|Developer Tools For Extensions]] extension)</small>
 * [[Documentation/Nightly/Modules/DICOM|DICOM]]    <small>(scripted, built-in)</small>
-* DICOM2Full Brain Tractography    <small>(scripted, built-in)</small>
+* [[Documentation/Nightly/Extensions/SlicerDMRI|DICOM2Full Brain Tractography]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|Slicer DMRI]] extension)</small>
+* DICOMPatcher    <small>(scripted, built-in)</small>
 * [[Documentation/Nightly/Modules/DicomSroExport|Dicom Sro Export]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
 * [[Documentation/Nightly/Modules/DistanceMapBasedRegistration|Distance Map Based Registration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerProstate|Slicer Prostate]] extension)</small>
+* [[Documentation/Nightly/Modules/DMRIInstall|DMRIInstall]]    <small>(scripted, built-in)</small>
 * [[Documentation/Nightly/Extensions/IASEM|Double Threshold Effect]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
 * [[Documentation/Nightly/Modules/dPetBrainQuantification|d Pet Brain Quantification]]    <small>(scripted, bundled in [http://gti-fing.github.io/SlicerPetSpectAnalysis Pet Spect Analysis] extension)</small>
 * [[Documentation/Nightly/Extensions/SlicerRT|Dvh Comparison]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
-* [[Documentation/Nightly/Extensions/EasyClip|Easy Clip]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/EasyClip|Easy Clip]] extension)</small>
+* [[Documentation/Nightly/Modules/EasyClip|Easy Clip]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/EasyClip|Easy Clip]] extension)</small>
 * [[Documentation/Nightly/Modules/Editor|Editor]]    <small>(scripted, built-in)</small>
 * [[Documentation/Nightly/Modules/Endoscopy|Endoscopy]]    <small>(scripted, built-in)</small>
@@ Line 297: / Line 334: @@
 * [[Documentation/Nightly/Modules/ExtensionWizard|Extension Wizard]]    <small>(scripted, built-in)</small>
 * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect]    <small>(scripted, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small>
-* [[Documentation/Nightly/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]]    <small>(scripted, built-in)</small>
+* [[Documentation/Nightly/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|Slicer DMRI]] extension)</small>
 * [[Documentation/Nightly/Extensions/SlicerIGT|Fiducials To Model Registration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
+* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/FilmDosimetry Film Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/FilmDosimetry Film Dosimetry Analysis] extension)</small>
 * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 * [[Documentation/Nightly/Modules/GyroGuide|Gyro Guide]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] extension)</small>
 * [[Documentation/Nightly/Modules/HeterogeneityCAD|Heterogeneity CAD]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] extension)</small>
 * [[Documentation/Nightly/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/iGyne|i Gyne]] extension)</small>
-* [http://www.chestimagingplatform.org Interactive Lobe Segmentation]    <small>(scripted, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter KUtil]    <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 * [[Documentation/Nightly/Extensions/IASEM|Label Object Statistics]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small>
@@ Line 310: / Line 347: @@
 * [[Documentation/Nightly/Modules/LASegmentationWorkflow|LASegmentation Workflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 * [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
-* [https://github.com/SlicerIGT/LumpNav Lump Nav]    <small>(scripted, bundled in [https://github.com/SlicerIGT/LumpNav Lump Nav] extension)</small>
 * [[Documentation/Nightly/Extensions/MarginCalculator|Margin Calculator]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
+* [[Documentation/Nightly/Modules/MeshStatistics|Mesh Statistics]]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MeshStatistics Mesh Statistics Extension] extension)</small>
 * [[Documentation/Nightly/Extensions/SlicerIGT|Model Registration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 * [[Documentation/Nightly/Extensions/mpReview|mp Review]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/mpReview|mp Review]] extension)</small>
@@ Line 317: / Line 354: @@
 * [[Documentation/Nightly/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
 * [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]] extension)</small>
+* [[Documentation/Nightly/Extensions/DebuggingTools|Node Info]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/DebuggingTools|Debugging Tools]] extension)</small>
 * [[Documentation/Nightly/Extensions/DebuggingTools|Node Modified Statistics]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/DebuggingTools|Debugging Tools]] extension)</small>
+* [[Documentation/Nightly/Extensions/SlicerDMRI|Nsg Plan Tracto]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerDMRI|Slicer DMRI]] extension)</small>
 * [[Documentation/Nightly/Extensions/PET-IndiC|PETIndi C]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 * [[Documentation/Nightly/Modules/PETTumorSegmentationEffect|PETTumor Segmentation Effect]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PETTumorSegmentation|PETTumor Segmentation]] extension)</small>
 * [[Documentation/Nightly/Extensions/SlicerHeart|Philips4d Us Dicom Patcher]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerHeart|Slicer Heart]] extension)</small>
-* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PickAndPaint Pick And Paint]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PickAndPaint Pick And Paint Extension] extension)</small>
+* [[Documentation/Nightly/Modules/PickAndPaint|Pick And Paint]]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PickAndPaint Pick And Paint Extension] extension)</small>
 * [[Documentation/Nightly/Extensions/SlicerRT|Plm Register]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
+* [[Documentation/Nightly/Extensions/SlicerIGT|Plus Model Catalog Browser]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 * [[Documentation/Nightly/Modules/PlusRemote|Plus Remote]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 * [[Documentation/Nightly/Extensions/DebuggingTools|Py Dev Remote Debug]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/DebuggingTools|Debugging Tools]] extension)</small>
-* [[Documentation/Nightly/Extensions/Q3DC|Q3DC]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/Q3DC|Q3DC]] extension)</small>
+* [[Documentation/Nightly/Extensions/PerkTutor|Python Metrics Calculator]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small>
+* [[Documentation/Nightly/Modules/Q3DC|Q3DC]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/Q3DC|Q3DC]] extension)</small>
 * [[Documentation/Nightly/Modules/QuantitativeIndicesTool|Quantitative Indices Tool]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
+* [[Documentation/Nightly/Extensions/QuantitativeReporting|Quantitative Reporting]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/QuantitativeReporting|Quantitative Reporting]] extension)</small>
+* [[Documentation/Nightly/Extensions/SlicerPathology|Quick TCGAEffect]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerPathology|Slicer Pathology]] extension)</small>
+* [[Documentation/Nightly/Modules/ResectionVolume|Resection Volume]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ResectionPlanner|Resection Planner]] extension)</small>
 * [[Documentation/Nightly/Modules/SampleData|Sample Data]]    <small>(scripted, built-in)</small>
 * [[Documentation/Nightly/Modules/ScarVisualization|Scar Visualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 * Scene Performance    <small>(scripted, built-in)</small>
 * [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis Monitoring]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis]] extension)</small>
+* [[Documentation/Nightly/Modules/ScreenCapture|Screen Capture]]    <small>(scripted, built-in)</small>
 * [[Documentation/Nightly/Modules/SegmentCAD|Segment CAD]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] extension)</small>
-* [[Documentation/Nightly/Extensions/SlicerRT|Segment Editor]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small>
+* [[Documentation/Nightly/Modules/SegmentEditor|Segment Editor]]    <small>(scripted, built-in)</small>
+* [https://github.com/lassoan/SlicerSegmentEditorExtraEffects Segment Editor Fast Marching]    <small>(scripted, bundled in [https://github.com/lassoan/SlicerSegmentEditorExtraEffects Segment Editor Extra Effects] extension)</small>
+* [https://github.com/lassoan/SlicerSegmentEditorExtraEffects Segment Editor Flood Filling]    <small>(scripted, bundled in [https://github.com/lassoan/SlicerSegmentEditorExtraEffects Segment Editor Extra Effects] extension)</small>
+* [[Documentation/Nightly/Extensions/PETTumorSegmentation|Segment Editor PETTumor]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PETTumorSegmentation|PETTumor Segmentation]] extension)</small>
+* [https://github.com/lassoan/SlicerSegmentEditorExtraEffects Segment Editor Watershed]    <small>(scripted, bundled in [https://github.com/lassoan/SlicerSegmentEditorExtraEffects Segment Editor Extra Effects] extension)</small>
+* Segment Statistics    <small>(scripted, built-in)</small>
+* [[Documentation/Nightly/Modules/ShapeQuantifier|Shape Quantifier]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ShapeQuantifier|Shape Quantifier]] extension)</small>
+* [[Documentation/Nightly/Extensions/ShapeQuantifier|Shape Quantifier Core]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ShapeQuantifier|Shape Quantifier]] extension)</small>
+* [[Documentation/Nightly/Extensions/SlicerPathology|Short Cut Effect]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerPathology|Slicer Pathology]] extension)</small>
 * [[Documentation/Nightly/Modules/SimpleFilters|Simple Filters]]    <small>(scripted, built-in)</small>
 * Slice Link Logic    <small>(scripted, built-in)</small>
 * Slicer4Minute    <small>(scripted, built-in)</small>
+* [[Documentation/Nightly/Extensions/SlicerAstro|Slicer Astro Data Probe]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerAstro|Slicer Astro]] extension)</small>
+* [[Documentation/Nightly/Extensions/SlicerPathology|Slicer Pathology]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerPathology|Slicer Pathology]] extension)</small>
+* [[Documentation/Nightly/Extensions/SlicerProstate|Slicer Prostate]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerProstate|Slicer Prostate]] extension)</small>
 * [[Documentation/Nightly/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small>
+* [[Documentation/Nightly/Extensions/SliceTracker|Slice Tracker]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SliceTracker|Slice Tracker]] extension)</small>
+* [[Documentation/Nightly/Extensions/SliceTracker|Slice Tracker Registration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SliceTracker|Slice Tracker]] extension)</small>
+* [[Documentation/Nightly/Extensions/SliceTracker|Slice Tracker ZFrame Registration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SliceTracker|Slice Tracker]] extension)</small>
 * [[Documentation/Nightly/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis]] extension)</small>
 * [[Documentation/Nightly/Modules/SurfaceRegistration|Surface Registration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
@@ Line 342: / Line 401: @@
 * [[Documentation/Nightly/Extensions/MarginCalculator|Synthetic RTDose]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
 * [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]] extension)</small>
+* [[Documentation/Nightly/Extensions/SlicerIGT|Texture Model]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 * [[Documentation/Nightly/Extensions/SlicerHeart|Valve View]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerHeart|Slicer Heart]] extension)</small>
 * [[Documentation/Nightly/Modules/VectorToScalarVolume|Vector To Scalar Volume]]    <small>(scripted, built-in)</small>
 * [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
-* [https://github.com/SlicerIGT/LumpNav Viewpoint]    <small>(scripted, bundled in [https://github.com/SlicerIGT/LumpNav Lump Nav] extension)</small>
+* [[Documentation/Nightly/Extensions/SlicerIGT|Viewpoint]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
+* [[Documentation/Nightly/Extensions/SliceTracker|Volume Clip To Label]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SliceTracker|Slice Tracker]] extension)</small>
 * [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip With Model]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip]] extension)</small>
 * [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip With Roi]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip]] extension)</small>
@@ Line 351: / Line 412: @@
 * [https://github.com/Tomnl/Slicer-Wasp Wasp]    <small>(scripted, bundled in [https://github.com/Tomnl/Slicer-Wasp Wasp] extension)</small>
 * [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small>
+* [[Documentation/Nightly/Extensions/XNATSlicer|Xnat Slicer]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] extension)</small>
 __NOTOC__