Difference between revisions of "Documentation/Nightly/ModuleExtensionListing"
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<noinclude>{{:Documentation/Nightly/ModuleExtensionListing/TOC}}</noinclude> | <noinclude>{{:Documentation/Nightly/ModuleExtensionListing/TOC}}</noinclude> | ||
| − | = Modules by | + | = Modules by category = |
| − | + | 36 categories: | |
| − | * [[ | + | * [[#BRAINS|BRAINS]] |
| − | * [[ | + | ** [[#LabelStatistics|Label Statistics]] |
| − | * [[ | + | * [[#Cardiac_MRI_Toolkit|Cardiac MRI Toolkit]] |
| − | * [ | + | * [[#CMF_Registration|CMF Registration]] |
| − | * [[ | + | ** [[#Voxelbase_Registration|Voxelbase Registration]] |
| − | * [[ | + | * [[#Converters|Converters]] |
| − | * [[ | + | * [[#Developer_Tools|Developer Tools]] |
| − | * [[ | + | ** [[#DICOM_Plugins|DICOM Plugins]] |
| − | * [[ | + | ** [[#Editor_Extensions|Editor Extensions]] |
| − | * [[ | + | ** [[#Matlab|Matlab]] |
| − | + | * [[#Diffusion|Diffusion]] | |
| − | * [[ | + | ** [[#Diffusion_Data_Conversion|Diffusion Data Conversion]] |
| − | * | + | ** [[#Diffusion_Tensor_Images|Diffusion Tensor Images]] |
| − | * [[ | + | ** [[#Diffusion_Weighted_Images|Diffusion Weighted Images]] |
| − | * | + | ** [[#FiberAnalysis|Fiber Analysis]] |
| − | * | + | ** [[#Tractography|Tractography]] |
| − | * | + | * [[#Editor_Effects|Editor Effects]] |
| − | * | + | * [[#EditorEffect|Editor Effect]] |
| − | * [[ | + | * [[#Endoscopy|Endoscopy]] |
| − | * [ | + | * [[#Examples|Examples]] |
| − | * [[ | + | * [[#Exporter|Exporter]] |
| − | * [ | + | * [[#Filtering|Filtering]] |
| − | * [[ | + | ** [[#Arithmetic|Arithmetic]] |
| − | * [[ | + | ** [[#Denoising|Denoising]] |
| − | * [[ | + | ** [[#Morphology|Morphology]] |
| − | * [ | + | * [[#IGT|IGT]] |
| − | * [ | + | * [[#Informatics|Informatics]] |
| − | * [ | + | * [[#Legacy|Legacy]] |
| − | * [ | + | ** [[#Converters|Converters]] |
| − | * [ | + | ** [[#Diffusion|Diffusion]] |
| − | * [ | + | *** [[#Denoising|Denoising]] |
| − | * [ | + | *** [[#Diffusion_Data_Conversion|Diffusion Data Conversion]] |
| − | * [ | + | ** [[#Filtering|Filtering]] |
| − | * [ | + | ** [[#Registration|Registration]] |
| − | * [ | + | ** [[#Work_in_Progress|Work in Progress]] |
| − | * [ | + | *** [[#Diffusion_Tensor|Diffusion Tensor]] |
| − | + | **** [[#Test|Test]] | |
| − | * [ | + | * [[#Mesh_Generation|Mesh Generation]] |
| − | * [ | + | * [[#MeshGeneration|Mesh Generation]] |
| − | * [ | + | * [[#Microscopy|Microscopy]] |
| − | * [ | + | * [[#MultiVolume_Support|Multi Volume Support]] |
| − | * [ | + | * [[#Perk_Tutor|Perk Tutor]] |
| − | * [ | + | * [[#Plastimatch|Plastimatch]] |
| − | * [[Documentation/Nightly/Modules/ | + | ** [[#Registration|Registration]] |
| − | * [ | + | ** [[#Utilities|Utilities]] |
| − | * [[Documentation/Nightly/Modules/ | + | * [[#Quantification|Quantification]] |
| − | * [ | + | ** [[#ChangeQuantification|Change Quantification]] |
| − | + | * [[#Radiotherapy|Radiotherapy]] | |
| − | * [ | + | * [[#Registration|Registration]] |
| − | * [ | + | ** [[#Specialized|Specialized]] |
| − | * | + | * [[#Segmentation|Segmentation]] |
| − | + | ** [[#Specialized|Specialized]] | |
| − | * [[Documentation/Nightly/ | + | * [[#Sequences|Sequences]] |
| − | * [[Documentation/Nightly/Modules/ | + | * [[#Shape_Analysis|Shape Analysis]] |
| − | * [[Documentation/Nightly/ | + | * [[#Slicelets|Slicelets]] |
| − | + | * [[#Surface_Models|Surface Models]] | |
| − | * [[Documentation/Nightly/Modules/ | + | * [[#Testing|Testing]] |
| − | + | ** [[#IGT_Tests|IGT Tests]] | |
| − | + | ** [[#TestCases|Test Cases]] | |
| − | + | * [[#Unspecified|Unspecified]] | |
| − | + | * [[#Utilities|Utilities]] | |
| − | + | ** [[#BRAINS|BRAINS]] | |
| − | + | * [[#Vascular_Modeling_Toolkit|Vascular Modeling Toolkit]] | |
| − | + | * [[#Wizards|Wizards]] | |
| − | + | * [[#Work_in_Progress|Work in Progress]] | |
| − | + | ** [[#Converters|Converters]] | |
| − | + | ** [[#Informatics|Informatics]] | |
| − | + | *** [[#TestCases|Test Cases]] | |
| − | + | * [[#XNATSlicer|XNATSlicer]] | |
| − | + | == BRAINS == | |
| − | + | === LabelStatistics === | |
| − | + | * BRAINSLabel Stats <small>(cli, built-in)</small> | |
| − | + | == Cardiac MRI Toolkit == | |
| − | + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Connected Threshold Filter] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | |
| − | + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Isolated Connected Filter] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | |
| − | + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | |
| − | + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | |
| − | + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | |
| − | + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | |
| − | + | * [[Documentation/Nightly/Modules/ScarVisualization|Scar Visualization]] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | |
| − | + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Boolean REMOVEFilter] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | |
| − | + | * [[Documentation/Nightly/Modules/LASegmentationWorkflow|LASegmentation Workflow]] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | |
| − | + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | |
| − | + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | |
| − | + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | |
| − | + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit LASegmentation Graph Cuts] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | |
| − | + | == CMF Registration == | |
| − | + | * [[Documentation/Nightly/Extensions/CMFreg|Apply Matrix]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small> | |
| − | + | * [[Documentation/Nightly/Modules/LandmarkRegistration|Landmark Registration]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small> | |
| − | + | * [[Documentation/Nightly/Extensions/CMFreg|Surface Registration]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small> | |
| − | + | * [[Documentation/Nightly/Modules/LabelExtraction|Label Extraction]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small> | |
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* [[Documentation/Nightly/Modules/LabelAddition|Label Addition]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small> | * [[Documentation/Nightly/Modules/LabelAddition|Label Addition]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small> | ||
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/Downsize|Downsize]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | + | === Voxelbase Registration === | |
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* [[Documentation/Nightly/Modules/MaskCreation|Mask Creation]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small> | * [[Documentation/Nightly/Modules/MaskCreation|Mask Creation]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small> | ||
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/NonGrowing|Non Growing]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | + | * [[Documentation/Nightly/Modules/Growing|Growing]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small> | |
| − | + | == Converters == | |
| − | + | * [[Documentation/Nightly/Modules/VectorToScalarVolume|Vector To Scalar Volume]] <small>(scripted, built-in)</small> | |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/CropVolume|Crop Volume]] <small>(loadable, built-in)</small> |
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| − | * [[Documentation/Nightly/Modules/ | ||
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| − | * [[Documentation/Nightly/Modules/ | ||
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* [[Documentation/Nightly/Modules/OrientScalarVolume|Orient Scalar Volume]] <small>(cli, built-in)</small> | * [[Documentation/Nightly/Modules/OrientScalarVolume|Orient Scalar Volume]] <small>(cli, built-in)</small> | ||
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/CreateDICOMSeries|Create DICOMSeries]] <small>(cli, built-in)</small> |
| − | + | == Developer Tools == | |
| − | + | * [[Documentation/Nightly/Modules/EventBroker|Event Broker]] | |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/ExecutionModelTour|Execution Model Tour]] <small>(cli, built-in)</small> |
| − | + | * Double Arrays <small>(loadable, built-in)</small> | |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] extension)</small> |
| − | * | + | * [[Documentation/Nightly/Modules/Cameras|Cameras]] <small>(loadable, built-in)</small> |
| − | + | * [[Documentation/Nightly/Extensions/DeveloperToolsForExtensions|Developer Tools For Extensions]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/DeveloperToolsForExtensions|Developer Tools For Extensions]] extension)</small> | |
| − | + | * [[Documentation/Nightly/Modules/ExtensionWizard|Extension Wizard]] <small>(scripted, built-in)</small> | |
| − | + | * [[Documentation/Nightly/Modules/ImageMaker|Image Maker]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/ImageMaker|Image Maker]] extension)</small> | |
| − | + | === DICOM Plugins === | |
| − | + | * DICOMLongitudinal PETCTPlugin | |
| − | + | * [[Documentation/Nightly/Modules/DICOMRWVMPlugin|DICOMRWVMPlugin]] | |
| − | * [[Documentation/Nightly/Extensions/ | + | * Multi Volume Importer Plugin |
| − | + | * [[Documentation/Nightly/Modules/DICOMPETSUVPlugin|DICOMPETSUVPlugin]] | |
| − | + | * DICOMDiffusion Volume Plugin | |
| − | * [[Documentation/Nightly/Modules/ | + | * Dicom Rt Import Export Plugin |
| − | * [[Documentation/Nightly/Extensions/ | + | * DICOMSegmentation Plugin |
| − | + | * Dicom Sro Import Plugin | |
| − | * [[Documentation/Nightly/Modules/ | + | * DICOMScalar Volume Plugin |
| − | + | * DICOMSlicer Data Bundle Plugin | |
| − | * [[Documentation/Nightly/ | + | === Editor Extensions === |
| − | + | * [[Documentation/Nightly/Extensions/IASEM|Binary Watershed Effect]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> | |
| − | * | + | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] <small>(scripted, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice Effect] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> |
| − | * | + | * [[Documentation/Nightly/Extensions/IASEM|Double Threshold Effect]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/PETTumorSegmentationEffect|PETTumor Segmentation Effect]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PETTumorSegmentation|PETTumor Segmentation]] extension)</small> |
| − | * | + | === Matlab === |
| − | * | + | * [[Documentation/Nightly/Modules/MatlabCommander|Matlab Commander]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> |
| − | * | + | * [[Documentation/Nightly/Modules/MatlabModuleGenerator|Matlab Module Generator]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> |
| − | * | + | == Diffusion == |
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| − | * [[Documentation/Nightly/ | ||
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| − | * [[Documentation/Nightly/ | ||
| − | * [[Documentation/Nightly/ | ||
| − | * [[Documentation/Nightly/Modules/ | ||
| − | * [[Documentation/Nightly/Modules/ | ||
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* [[Documentation/Nightly/Modules/TractographyDisplay|Tractography Display]] <small>(loadable, built-in)</small> | * [[Documentation/Nightly/Modules/TractographyDisplay|Tractography Display]] <small>(loadable, built-in)</small> | ||
| + | * DICOM2Full Brain Tractography <small>(scripted, built-in)</small> | ||
| + | === Diffusion Data Conversion === | ||
| + | * DWIConvert <small>(cli, built-in)</small> | ||
| + | === Diffusion Tensor Images === | ||
| + | * [[Documentation/Nightly/Modules/ResampleDTIVolume|Resample DTIVolume]] <small>(cli, built-in)</small> | ||
| + | * [[Documentation/Nightly/Modules/DiffusionTensorScalarMeasurements|Diffusion Tensor Scalar Measurements]] <small>(cli, built-in)</small> | ||
| + | * [[Documentation/Nightly/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]] <small>(cli, built-in)</small> | ||
* Tractography Interactive Seeding <small>(loadable, built-in)</small> | * Tractography Interactive Seeding <small>(loadable, built-in)</small> | ||
| − | * [[Documentation/Nightly/Modules/ | + | === Diffusion Weighted Images === |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]] <small>(cli, built-in)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/ResampleScalarVectorDWIVolume|Resample Scalar Vector DWIVolume]] <small>(cli, built-in)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/DWIToDTIEstimation|DWITo DTIEstimation]] <small>(cli, built-in)</small> |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]] <small>(cli, built-in)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/FinslerBacktracing|Finsler Backtracing]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]] extension)</small> |
| − | + | * [[Documentation/Nightly/Modules/FinslerTractography|Finsler Tractography]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]] extension)</small> | |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]] <small>(cli, built-in)</small> |
| − | * [ | + | === FiberAnalysis === |
| − | * [[Documentation/Nightly/Extensions/ | + | * [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small> |
| − | + | * [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|Fiber Compare]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small> | |
| − | * [[Documentation/Nightly/Extensions/ | + | * [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|Merge Stat With Fiber]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small> |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small> |
| − | + | === Tractography === | |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]] <small>(scripted, built-in)</small> |
| − | * | + | * Fiber Tract Measurements <small>(cli, built-in)</small> |
| − | * | + | * Fiber Bundle Label Select <small>(cli, built-in)</small> |
| − | + | == Editor Effects == | |
| − | |||
* [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small> | * [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small> | ||
| − | + | == EditorEffect == | |
| − | + | * [[Documentation/Nightly/Extensions/PETTumorSegmentation|PETTumor Segmentation]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PETTumorSegmentation|PETTumor Segmentation]] extension)</small> | |
| − | + | == Endoscopy == | |
| − | + | * [[Documentation/Nightly/Modules/Endoscopy|Endoscopy]] <small>(scripted, built-in)</small> | |
| − | + | == Examples == | |
| − | + | * [[Documentation/Nightly/Modules/FastGrowCut|Fast Grow Cut]] <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> | |
| − | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | |
| − | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] <small | |
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* [[Documentation/Nightly/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> | * [[Documentation/Nightly/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> | ||
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/BRAINSDemonWarp|BRAINSDemon Warp]] <small>(cli, built-in)</small> |
| − | + | * BRAINSDWICleanup <small>(cli, built-in)</small> | |
| − | * [[Documentation/Nightly/Extensions/ | + | * [[Documentation/Nightly/Modules/BRAINSFit|BRAINSFit]] <small>(cli, built-in)</small> |
| − | * [[Documentation/Nightly/ | + | * BRAINSLabel Stats <small>(cli, built-in)</small> |
| − | * [[Documentation/Nightly/Extensions/ | + | * [[Documentation/Nightly/Modules/BRAINSResample|BRAINSResample]] <small>(cli, built-in)</small> |
| − | * [[Documentation/Nightly/ | + | * BRAINSResize <small>(cli, built-in)</small> |
| − | * [[Documentation/Nightly/ | + | * BRAINSROIAuto <small>(cli, built-in)</small> |
| − | + | * BRAINSStrip Rotation <small>(cli, built-in)</small> | |
| − | * [[Documentation/Nightly/Modules/ | + | * BRAINSTransform Convert <small>(cli, built-in)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Extensions/SlicerIGT|Breach Warning]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | |
| − | * [[Documentation/Nightly/Extensions/ | + | * [[Documentation/Nightly/Modules/CastScalarVolume|Cast Scalar Volume]] <small>(cli, built-in)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * [http://slicer.vmtk.org/ Centerline Computation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/ChangeTracker|Change Tracker]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] extension)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/CheckerBoardFilter|Checker Board Filter]] <small>(cli, built-in)</small> |
| − | + | * [[Documentation/Nightly/Extensions/CleaverExtension|Cleaver CLI]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CleaverExtension|Cleaver Extension]] extension)</small> | |
| + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Boolean REMOVEFilter] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Connected Threshold Filter] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Isolated Connected Filter] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit LASegmentation Graph Cuts] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| + | * [[Documentation/Nightly/Modules/CollectFiducials|Collect Fiducials]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small> | ||
| + | * [[Documentation/Nightly/Modules/Colors|Colors]] <small>(loadable, built-in)</small> | ||
| + | * [[Documentation/Nightly/Modules/CompareVolumes|Compare Volumes]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small> | ||
| + | * [[Documentation/Nightly/Modules/CornerAnnotation|Corner Annotation]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] extension)</small> | ||
| + | * [[Documentation/Nightly/Modules/CreateDICOMSeries|Create DICOMSeries]] <small>(cli, built-in)</small> | ||
| + | * [[Documentation/Nightly/Extensions/SlicerIGT|Create Models]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small> | ||
| + | * [[Documentation/Nightly/Modules/CropVolume|Crop Volume]] <small>(loadable, built-in)</small> | ||
| + | * [[Documentation/Nightly/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]] <small>(cli, built-in)</small> | ||
| + | * [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]] extension)</small> | ||
| + | * [[Documentation/Nightly/Modules/Data|Data]] <small>(loadable, built-in)</small> | ||
| + | * [[Documentation/Nightly/Modules/DataProbe|Data Probe]] <small>(scripted, built-in)</small> | ||
| + | * [[Documentation/Nightly/Modules/DataStore|Data Store]] <small>(loadable, built-in)</small> | ||
| + | * [[Documentation/Nightly/Modules/DiceComputation|Dice Computation]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/DiceComputation|Dice Computation]] extension)</small> | ||
| + | * [[Documentation/Nightly/Modules/DICOM|DICOM]] <small>(scripted, built-in)</small> | ||
| + | * DICOM2Full Brain Tractography <small>(scripted, built-in)</small> | ||
* [[Documentation/Nightly/Modules/DicomSroExport|Dicom Sro Export]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small> | * [[Documentation/Nightly/Modules/DicomSroExport|Dicom Sro Export]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small> | ||
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Modules/DicomSroImport|Dicom Sro Import]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | + | * [[Documentation/Nightly/Modules/DiffusionTensorScalarMeasurements|Diffusion Tensor Scalar Measurements]] <small>(cli, built-in)</small> | |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]] <small>(cli, built-in)</small> |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Modules/DoseAccumulation|Dose Accumulation]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | + | * [[Documentation/Nightly/Modules/Downsize|Downsize]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small> | |
| − | * [[Documentation/Nightly/ | ||
| − | |||
* [[Documentation/Nightly/Modules/dPetBrainQuantification|d Pet Brain Quantification]] <small>(scripted, bundled in [http://gti-fing.github.io/SlicerPetSpectAnalysis Pet Spect Analysis] extension)</small> | * [[Documentation/Nightly/Modules/dPetBrainQuantification|d Pet Brain Quantification]] <small>(scripted, bundled in [http://gti-fing.github.io/SlicerPetSpectAnalysis Pet Spect Analysis] extension)</small> | ||
| − | + | * [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small> | |
| − | + | * [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small> | |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | * [[Documentation/Nightly/Extensions/ | ||
| − | * | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
* [[Documentation/Nightly/Extensions/SlicerRT|Dvh Comparison]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small> | * [[Documentation/Nightly/Extensions/SlicerRT|Dvh Comparison]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small> | ||
| − | * [[Documentation/Nightly/Modules/ | + | * DWIConvert <small>(cli, built-in)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]] <small>(cli, built-in)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]] <small>(cli, built-in)</small> |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Modules/DWIToDTIEstimation|DWITo DTIEstimation]] <small>(cli, built-in)</small> |
| − | + | * [[Documentation/Nightly/Modules/Editor|Editor]] <small>(scripted, built-in)</small> | |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/EMSegment|EMSegment]] <small>(loadable, built-in)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * EMSegment Command Line <small>(cli, built-in)</small> |
| − | * | + | * EMSegment Quick <small>(loadable, built-in)</small> |
| − | * | + | * EMSegment Transform To New Format <small>(cli, built-in)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/Endoscopy|Endoscopy]] <small>(scripted, built-in)</small> |
| − | * [[Documentation/Nightly/Extensions/ | + | * [[Documentation/Nightly/Modules/ExtractSkeleton|Extract Skeleton]] <small>(cli, built-in)</small> |
| − | + | * [[Documentation/Nightly/Modules/FastGrowCut|Fast Grow Cut]] <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> | |
| − | * | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> |
| + | * Fiber Bundle Label Select <small>(cli, built-in)</small> | ||
| + | * [[Documentation/Nightly/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]] <small>(scripted, built-in)</small> | ||
| + | * [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|Fiber Compare]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small> | ||
| + | * Fiber Tract Measurements <small>(cli, built-in)</small> | ||
* [[Documentation/Nightly/Modules/FiducialRegistration|Fiducial Registration]] <small>(cli, built-in)</small> | * [[Documentation/Nightly/Modules/FiducialRegistration|Fiducial Registration]] <small>(cli, built-in)</small> | ||
| − | * | + | * [[Documentation/Nightly/Extensions/SlicerIGT|Fiducial Registration Wizard]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | + | * [[Documentation/Nightly/Extensions/SlicerIGT|Fiducials To Model Registration]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small> | |
| − | + | * [[Documentation/Nightly/Modules/FinslerBacktracing|Finsler Backtracing]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]] extension)</small> | |
| − | + | * [[Documentation/Nightly/Modules/FinslerTractography|Finsler Tractography]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]] extension)</small> | |
| − | + | * [[Documentation/Nightly/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]] <small>(cli, built-in)</small> | |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | * [ | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | * [[Documentation/Nightly/Modules/ | ||
| − | * [[Documentation/Nightly/ | ||
| − | |||
| − | |||
| − | * [[Documentation/Nightly/Modules/ | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | ||
| − | + | * [[Documentation/Nightly/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]] <small>(cli, built-in)</small> | |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]] <small>(cli, built-in)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/GrayscaleGrindPeakImageFilter|Grayscale Grind Peak Image Filter]] <small>(cli, built-in)</small> |
| − | * [[Documentation/Nightly/Modules/ | ||
| − | |||
* [[Documentation/Nightly/Modules/GrayscaleModelMaker|Grayscale Model Maker]] <small>(cli, built-in)</small> | * [[Documentation/Nightly/Modules/GrayscaleModelMaker|Grayscale Model Maker]] <small>(cli, built-in)</small> | ||
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/Growing|Growing]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/GyroGuide|Gyro Guide]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] extension)</small> |
| − | + | * [[Documentation/Nightly/Modules/HeterogeneityCAD|Heterogeneity CAD]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] extension)</small> | |
| − | * | + | * [[Documentation/Nightly/Modules/HistogramMatching|Histogram Matching]] <small>(cli, built-in)</small> |
| − | * | + | * [[Documentation/Nightly/Extensions/IASEM|IASEMImport]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> |
| − | + | * [[Documentation/Nightly/Extensions/IASEM|IASEMImport Series]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> | |
| − | * | + | * [[Documentation/Nightly/Extensions/iGyne|i Gyne]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/iGyne|i Gyne]] extension)</small> |
| − | * | + | * [[Documentation/Nightly/Modules/ImageLabelCombine|Image Label Combine]] <small>(cli, built-in)</small> |
| − | * [[Documentation/Nightly/Extensions/ | + | * [[Documentation/Nightly/Modules/IntensityDifferenceMetric|Intensity Difference Metric]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] extension)</small> |
| − | * | + | * [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small> |
| − | + | * [[Documentation/Nightly/Modules/Isodose|Isodose]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small> | |
| − | * | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter KUtil] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> |
| − | * | + | * [[Documentation/Nightly/Modules/LabelAddition|Label Addition]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | + | * [[Documentation/Nightly/Modules/LabelExtraction|Label Extraction]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small> | |
| − | * | + | * [[Documentation/Nightly/Modules/LabelMapSmoothing|Label Map Smoothing]] <small>(cli, built-in)</small> |
| − | * | + | * [[Documentation/Nightly/Extensions/IASEM|Label Object Statistics]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> |
| − | * | + | * [[Documentation/Nightly/Modules/LabelStatistics|Label Statistics]] <small>(scripted, built-in)</small> |
| − | * | + | * [[Documentation/Nightly/Extensions/Reporting|Label To DICOMSEGConverter]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/Reporting|Reporting]] extension)</small> |
| − | * | + | * [[Documentation/Nightly/Modules/LandmarkRegistration|Landmark Registration]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * | + | * [[Documentation/Nightly/Modules/LAScarSegmenter|LAScar Segmenter]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small> |
| − | + | * [[Documentation/Nightly/Modules/LASegmentationWorkflow|LASegmentation Workflow]] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | |
| − | + | * [http://slicer.vmtk.org/ Level Set Segmentation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | |
| − | * | + | * [[Documentation/Nightly/Extensions/LightWeightRobotIGT|Light Weight Robot IGT]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/LightWeightRobotIGT|Light Weight Robot IGT]] extension)</small> |
| − | * | + | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
| − | * | + | * [[Documentation/Nightly/Modules/Markups|Markups]] <small>(loadable, built-in)</small> |
| − | * [http:// | + | * [[Documentation/Nightly/Extensions/SlicerIGT|Markups To Model]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * | + | * [[Documentation/Nightly/Modules/MaskCreation|Mask Creation]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * | + | * [[Documentation/Nightly/Modules/MaskScalarVolume|Mask Scalar Volume]] <small>(cli, built-in)</small> |
| − | * | + | * [[Documentation/Nightly/Modules/MedianImageFilter|Median Image Filter]] <small>(cli, built-in)</small> |
| − | * | + | * [[Documentation/Nightly/Modules/MergeModels|Merge Models]] <small>(cli, built-in)</small> |
| − | * | + | * [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|Merge Stat With Fiber]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small> |
| − | * | + | * [[Documentation/Nightly/Modules/MeshCompression|Mesh Compression]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
| − | * | + | * [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]] extension)</small> |
| − | * | + | * [[Documentation/Nightly/Extensions/Sequences|Metafile Importer]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/Sequences|Sequences]] extension)</small> |
| − | * | + | * [[Documentation/Nightly/Modules/ModelMaker|Model Maker]] <small>(cli, built-in)</small> |
| − | * | + | * [[Documentation/Nightly/Extensions/SlicerIGT|Model Registration]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * | + | * [[Documentation/Nightly/Modules/Models|Models]] <small>(loadable, built-in)</small> |
| − | * | + | * [[Documentation/Nightly/Modules/ModelToLabelMap|Model To Label Map]] <small>(cli, built-in)</small> |
| − | * | + | * [[Documentation/Nightly/Modules/MultiplyScalarVolumes|Multiply Scalar Volumes]] <small>(cli, built-in)</small> |
| − | * | + | * [[Documentation/Nightly/Modules/MultiVolumeExplorer|Multi Volume Explorer]] <small>(loadable, built-in)</small> |
| − | * | + | * [[Documentation/Nightly/Modules/MultiVolumeImporter|Multi Volume Importer]] <small>(scripted, built-in)</small> |
| − | + | * [[Documentation/Nightly/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]] <small>(cli, built-in)</small> | |
| − | * | + | * [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]] extension)</small> |
| − | + | * [[Documentation/Nightly/Modules/NonGrowing|Non Growing]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small> | |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/OpenIGTLinkIF|Open IGTLink IF]] <small>(loadable, built-in)</small> |
| − | * | + | * [[Documentation/Nightly/Modules/OpenIGTLinkRemote|Open IGTLink Remote]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * | + | * [[Documentation/Nightly/Modules/OrientScalarVolume|Orient Scalar Volume]] <small>(cli, built-in)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/PathExplorer|Path Explorer]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | + | * [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] extension)</small> | |
| − | * | + | * Perform Metric Test <small>(cli, built-in)</small> |
| − | + | * [[Documentation/Nightly/Modules/PerkEvaluator|Perk Evaluator]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small> | |
| − | * [ | + | * [[Documentation/Nightly/Extensions/PET-IndiC|PETIndi C]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PET-IndiC|PET-Indi C]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|PETSUVImage Maker]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
| − | + | * [[Documentation/Nightly/Extensions/PETTumorSegmentation|PETTumor Segmentation]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PETTumorSegmentation|PETTumor Segmentation]] extension)</small> | |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Extensions/SlicerIGT|Pivot Calibration]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/PkModeling|Pk Modeling]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PkModeling|Pk Modeling]] extension)</small> |
| − | + | * [[Documentation/Nightly/Extensions/SlicerRT|Planar Image]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small> | |
| − | * [[Documentation/Nightly/Extensions/ | + | * [[Documentation/Nightly/Extensions/SlicerRT|plastimatch slicer bspline]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | + | * [[Documentation/Nightly/Extensions/SlicerRT|plastimatch slicer landwarp]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small> | |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Extensions/SlicerRT|Plastimatch Py]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | + | * [[Documentation/Nightly/Extensions/SlicerRT|Plm Register]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small> | |
| + | * [[Documentation/Nightly/Modules/PlusRemote|Plus Remote]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small> | ||
| + | * [[Documentation/Nightly/Modules/ProbeVolumeWithModel|Probe Volume With Model]] <small>(cli, built-in)</small> | ||
| + | * [[Documentation/Nightly/Extensions/PerkTutor|Python Metrics Calculator]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small> | ||
| + | * [[Documentation/Nightly/Modules/QuantitativeIndicesCLI|Quantitative Indices CLI]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PET-IndiC|PET-Indi C]] extension)</small> | ||
| + | * [[Documentation/Nightly/Modules/QuantitativeIndicesTool|Quantitative Indices Tool]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PET-IndiC|PET-Indi C]] extension)</small> | ||
| + | * [[Documentation/Nightly/Modules/Reformat|Reformat]] <small>(loadable, built-in)</small> | ||
* [[Documentation/Nightly/Extensions/Reporting|Reporting]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/Reporting|Reporting]] extension)</small> | * [[Documentation/Nightly/Extensions/Reporting|Reporting]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/Reporting|Reporting]] extension)</small> | ||
| − | + | * [[Documentation/Nightly/Modules/ResampleDTIVolume|Resample DTIVolume]] <small>(cli, built-in)</small> | |
| − | + | * [[Documentation/Nightly/Modules/ResampleScalarVectorDWIVolume|Resample Scalar Vector DWIVolume]] <small>(cli, built-in)</small> | |
| − | + | * [[Documentation/Nightly/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]] <small>(cli, built-in)</small> | |
| − | + | * [[Documentation/Nightly/Modules/SampleData|Sample Data]] <small>(scripted, built-in)</small> | |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Modules/ScarVisualization|Scar Visualization]] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> |
| − | + | * [[Documentation/Nightly/Modules/SceneViews|Scene Views]] <small>(loadable, built-in)</small> | |
| − | + | * [[Documentation/Nightly/Modules/SegmentCAD|Segment CAD]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] extension)</small> | |
| − | * [[ | + | * [[Documentation/Nightly/Extensions/Sequences|Sequence Browser]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/Sequences|Sequences]] extension)</small> |
| − | * [[ | + | * [[Documentation/Nightly/Extensions/Sequences|Sequences]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/Sequences|Sequences]] extension)</small> |
| − | * [[ | + | * [[Documentation/Nightly/Modules/SimpleFilters|Simple Filters]] <small>(scripted, built-in)</small> |
| − | + | * [[Documentation/Nightly/Modules/SimpleRegionGrowingSegmentation|Simple Region Growing Segmentation]] <small>(cli, built-in)</small> | |
| − | * [[ | + | * [[Documentation/Nightly/Modules/SkullStripper|Skull Stripper]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/SkullStripper|Skull Stripper]] extension)</small> |
| − | + | * [[Documentation/Nightly/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small> | |
| − | * [[ | + | * [[Documentation/Nightly/Modules/SobolevSegmenter|Sobolev Segmenter]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/SobolevSegmenter|Sobolev Segmenter]] extension)</small> |
| − | + | * [[Documentation/Nightly/Extensions/IASEM|Spacing Aware Curvature Diffusion]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> | |
| − | * [[ | + | * [[Documentation/Nightly/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis]] extension)</small> |
| − | + | * [[Documentation/Nightly/Modules/SubjectHierarchy|Subject Hierarchy]] <small>(loadable, built-in)</small> | |
| − | * [[ | + | * [[Documentation/Nightly/Modules/SubtractScalarVolumes|Subtract Scalar Volumes]] <small>(cli, built-in)</small> |
| − | + | * [[Documentation/Nightly/Extensions/CMFreg|Surface Registration]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small> | |
| − | * [[ | + | * [[Documentation/Nightly/Modules/SurfaceToolbox|Surface Toolbox]] <small>(scripted, built-in)</small> |
| − | + | * [[Documentation/Nightly/Modules/SUVFactorCalculator|SUVFactor Calculator]] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small> | |
| − | * [[ | + | * [[Documentation/Nightly/Modules/SwissSkullStripper|Swiss Skull Stripper]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]] extension)</small> |
| − | + | * [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]] extension)</small> | |
| − | * [[ | + | * [[Documentation/Nightly/Modules/ThingiverseBrowser|Thingiverse Browser]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ThingiverseBrowser|Thingiverse Browser]] extension)</small> |
| − | + | * [[Documentation/Nightly/Modules/ThresholdScalarVolume|Threshold Scalar Volume]] <small>(cli, built-in)</small> | |
| − | * [[ | + | * [[Documentation/Nightly/Modules/TrackerStabilizer|Tracker Stabilizer]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small> |
| − | + | * [[Documentation/Nightly/Modules/TractographyDisplay|Tractography Display]] <small>(loadable, built-in)</small> | |
| − | * [[ | + | * Tractography Interactive Seeding <small>(loadable, built-in)</small> |
| − | + | * [[Documentation/Nightly/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]] <small>(cli, built-in)</small> | |
| − | * [[ | + | * [[Documentation/Nightly/Extensions/SlicerIGT|Transform Fusion]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [[ | + | * [[Documentation/Nightly/Modules/TransformRecorder|Transform Recorder]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small> |
| − | + | * [[Documentation/Nightly/Modules/Transforms|Transforms]] <small>(loadable, built-in)</small> | |
| − | * [[ | + | * [[Documentation/Nightly/Extensions/SlicerIGT|Ultrasound Snapshots]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [[ | + | * [[Documentation/Nightly/Modules/Units|Units]] <small>(loadable, built-in)</small> |
| − | * [[ | + | * VBRAINSDemon Warp <small>(cli, built-in)</small> |
| − | * [[ | + | * [[Documentation/Nightly/Modules/VectorToScalarVolume|Vector To Scalar Volume]] <small>(scripted, built-in)</small> |
| − | * [[ | + | * [http://slicer.vmtk.org/ Vesselness Filtering] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> |
| − | + | * [[Documentation/Nightly/Extensions/SlicerRT|Vff File Reader]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small> | |
| − | * [[ | + | * [[Documentation/Nightly/Modules/ViewControllers|View Controllers]] <small>(loadable, built-in)</small> |
| − | + | * [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip With Model]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip]] extension)</small> | |
| − | * [[ | + | * [[Documentation/Nightly/Modules/VolumeRendering|Volume Rendering]] <small>(loadable, built-in)</small> |
| − | + | * [[Documentation/Nightly/Modules/VolumeResliceDriver|Volume Reslice Driver]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small> | |
| − | + | * [[Documentation/Nightly/Modules/Volumes|Volumes]] <small>(loadable, built-in)</small> | |
| − | * [[ | + | * [[Documentation/Nightly/Modules/VotingBinaryHoleFillingImageFilter|Voting Binary Hole Filling Image Filter]] <small>(cli, built-in)</small> |
| − | + | * [https://github.com/Tomnl/Slicer-Wasp Wasp] <small>(scripted, bundled in [https://github.com/Tomnl/Slicer-Wasp Wasp] extension)</small> | |
| − | * [[ | + | * [[Documentation/Nightly/Extensions/SlicerIGT|Watchdog]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | + | * [[Documentation/Nightly/Modules/Welcome|Welcome]] <small>(loadable, built-in)</small> | |
| − | * [[ | + | * [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small> |
| − | + | * [[Documentation/Nightly/Modules/WorkflowSegmentation|Workflow Segmentation]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small> | |
| − | * [[ | + | * [[Documentation/Nightly/Extensions/XNATSlicer|Xnat Slicer]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] extension)</small> |
| − | * | + | = Modules by contributing organization = |
| − | * [[ | + | 74 contributing organizations: |
| − | * [[ | + | * [[#Asclepios_INRIA|Asclepios INRIA]] |
| − | + | * [[#AZE_R_D|AZE R&D]] | |
| − | * [[ | + | * [[#Boston_Children_s_Hospital|Boston Children's Hospital]] |
| − | + | * [[#Brigham_and_Women_s_Hospital|Brigham and Women's Hospital]] | |
| − | * [[ | + | * [[#BWH|BWH]] |
| − | * [[ | + | * [[#BWH.2C_SPL|BWH, SPL]] |
| − | * [[ | + | * [[#BWH.2C_SUMS|BWH, SUMS]] |
| − | * | + | * [[#CARMA|CARMA]] |
| − | * [[ | + | * [[#College_of_Information_Engineering.2C_Zhejiang_University_of_Technology.2C_Hangzhou.2C_China.29.3B_Xiaolei_Chen.2C_Jiashu_Zhang.28Department_of_Neurosurgery.2C_PLA_General_Hospital.2C_Beijing.2C_China|College of Information Engineering, Zhejiang University of Technology, Hangzhou, China); Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China]] |
| − | + | * [[#CRTC|CRTC]] | |
| − | * [ | + | * [[#gatech|gatech]] |
| − | * [[ | + | * [[#GE|GE]] |
| − | + | * [[#Georgia_Institute_of_Technology|Georgia Institute of Technology]] | |
| − | * [[ | + | * [[#Georgia_Tech|Georgia Tech]] |
| − | * [[ | + | * [[#IBM|IBM]] |
| − | + | * [[#Isomics|Isomics]] | |
| − | * [[ | + | * [[#Isomics_Inc.|Isomics Inc.]] |
| − | * [[ | + | * [[#Isomics.2C_Inc.|Isomics, Inc.]] |
| − | + | * [[#Isomics.2C_pieper.40isomics.com|Isomics, pieper@isomics.com]] | |
| − | + | * [[#Kitware|Kitware]] | |
| − | * [[ | + | * [[#Kitware.29|Kitware)]] |
| − | * [ | + | * [[#MGH|MGH]] |
| − | + | * [[#Moka_Creative.2C_LLC.2C_kumar.sunil.p.40gmail.com|Moka Creative, LLC, kumar.sunil.p@gmail.com]] | |
| − | * [[ | + | * [[#MRC_Harwell.2C_Oxfordshire|MRC Harwell, Oxfordshire]] |
| − | + | * [[#MSC.2FNLM|MSC/NLM]] | |
| − | * [[ | + | * [[#Noware|Noware]] |
| − | + | * [[#Orobix|Orobix]] | |
| − | * [[ | + | * [[#PerkLab_at_Queen_s_University|Perk Lab at Queen's University]] |
| − | + | * [[#PerkLab.2C_Queen_s|Perk Lab, Queen's]] | |
| − | + | * [[#PerkLab.2C_Queen_s_Universit|Perk Lab, Queen's Universit]] | |
| − | + | * [[#PerkLab.2C_Queen_s_University|Perk Lab, Queen's University]] | |
| − | + | * [[#PMH|PMH]] | |
| − | + | * [[#PMH.2C_Toronto|PMH, Toronto]] | |
| − | + | * [[#Princess_Margaret_Cancer_Centre|Princess Margaret Cancer Centre]] | |
| − | * [ | + | * [[#Queen_s|Queen's]] |
| − | * [ | + | * [[#Queen_s_Universit|Queen's Universit]] |
| − | + | * [[#Queen_s_University|Queen's University]] | |
| − | * [[ | + | * [[#Queen_s_University.29_Jaime_Garcia-Guevara_.28Queen_s_University|Queen's University) Jaime Garcia-Guevara (Queen's University]] |
| − | * [[ | + | * [[#Radiation_Medicine_Program.2C_Princess_Margaret_Hospital.2C_University_Health_Network_Toronto|Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto]] |
| − | + | * [[#RMP.2C_PMH|RMP, PMH]] | |
| − | + | * [[#SAIC-Frederick.2C_NCI-Frederick|SAIC-Frederick, NCI-Frederick]] | |
| − | + | * [[#SBU|SBU]] | |
| − | * | + | * [[#SCI_Institute|SCI Institute]] |
| − | * | + | * [[#Shiga_University_of_Medical_Science|Shiga University of Medical Science]] |
| − | * | + | * [[#Shiga_University_of_Medical_Science_in_Japan|Shiga University of Medical Science in Japan]] |
| − | * | + | * [[#SINAPSE|SINAPSE]] |
| − | * [[ | + | * [[#SNR|SNR]] |
| − | * [[ | + | * [[#SPL|SPL]] |
| − | * [[ | + | * [[#SPL_B_W_Harvard|SPL B&W Harvard]] |
| − | * [ | + | * [[#SPL.2C_BWH|SPL, BWH]] |
| − | * | + | * [[#SPL.2C_BWH.2C_UPenn|SPL, BWH, UPenn]] |
| − | * [[ | + | * [[#Stony_Brook_University|Stony Brook University]] |
| − | * [[ | + | * [[#SUMS|SUMS]] |
| − | * | + | * [[#Surgical_Planning_Lab|Surgical Planning Lab]] |
| − | + | * [[#UAB|UAB]] | |
| − | + | * [[#UHN.2C_Toronto|UHN, Toronto]] | |
| − | * [[ | + | * [[#Uiowa|Uiowa]] |
| − | * | + | * [[#UIowa|UIowa]] |
| − | * [[ | + | * [[#UNC|UNC]] |
| − | + | * [[#Univ_of_Michigan|Univ of Michigan]] | |
| − | * [[ | + | * [[#Univ._of_Iowa|Univ. of Iowa]] |
| − | + | * [[#University__Magna_Graecia__of_Catanzaro|University 'Magna Graecia' of Catanzaro]] | |
| − | * [[ | + | * [[#University_College_Cork|University College Cork]] |
| − | + | * [[#University_of_Alabama_Birmingham|University of Alabama Birmingham]] | |
| − | * [ | + | * [[#University_of_Heidelberg|University of Heidelberg]] |
| − | * [ | + | * [[#University_of_Iowa|University of Iowa]] |
| − | * [ | + | * [[#University_of_Iowa.29_and_Andrey_Fedorov_.28SPL|University of Iowa) and Andrey Fedorov (SPL]] |
| − | * [ | + | * [[#UPenn|UPenn]] |
| − | * [ | + | * [[#Utah|Utah]] |
| − | * [ | + | * [[#UVa|UVa]] |
| − | * [ | + | * [[#UWA|UWA]] |
| − | * [ | + | * [[#WashU-St._Louis.2C_dmarcus.40wustl.edu|Wash U-St. Louis, dmarcus@wustl.edu]] |
| − | * [ | + | * [[#while_at_GE|while at GE]] |
| − | * [ | + | == Asclepios INRIA == |
| − | * [[ | ||
| − | * [[ | ||
| − | |||
| − | * [[ | ||
| − | |||
| − | * [[ | ||
| − | * [[ | ||
* [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] extension)</small> | * [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] extension)</small> | ||
| − | == | + | == AZE R&D == |
| − | * [ | + | * JRC2013Vis |
| − | + | == Boston Children's Hospital == | |
| − | * [ | + | * [http://slicer.vmtk.org/ Centerline Computation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> |
| − | * | + | * [http://slicer.vmtk.org/ Level Set Segmentation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> |
| − | + | * [http://slicer.vmtk.org/ Vesselness Filtering] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | |
| − | * [[Documentation/Nightly/Modules/ | + | == Brigham and Women's Hospital == |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/CornerAnnotation|Corner Annotation]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] extension)</small> |
| − | * | + | * [[Documentation/Nightly/Modules/SurfaceToolbox|Surface Toolbox]] <small>(scripted, built-in)</small> |
| − | + | * test tractography display | |
| − | * | + | * [[Documentation/Nightly/Modules/VolumeResliceDriver|Volume Reslice Driver]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | == BWH == |
| − | + | * Add Many Markups Fiducial Test | |
| − | * [[Documentation/Nightly/Modules/ | + | * Change Tracker Self Test |
| − | + | * Colors Scalar Bar Self Test | |
| − | + | * Crop Volume Self Test | |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]] extension)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/DiceComputation|Dice Computation]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/DiceComputation|Dice Computation]] extension)</small> |
| − | * | + | * [[Documentation/Nightly/Modules/DICOMRWVMPlugin|DICOMRWVMPlugin]] |
| − | + | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] <small>(scripted, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> | |
| − | * [[Documentation/Nightly/ | + | * Fiducial Layout Switch Bug1914 |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/HeterogeneityCAD|Heterogeneity CAD]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] extension)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/Markups|Markups]] <small>(loadable, built-in)</small> |
| − | + | * Markups In Compare Viewers Self Test | |
| − | + | * Markups In Views Self Test | |
| − | * [ | + | * Neurosurgical Planning Tutorial Markups Self Test |
| − | + | * [[Documentation/Nightly/Modules/SegmentCAD|Segment CAD]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] extension)</small> | |
| − | * | + | * Volume Rendering Scene Close <small>(scripted, built-in)</small> |
| − | * | + | * [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small> |
| − | * [ | + | == BWH, SPL == |
| − | * [ | + | * [[Documentation/Nightly/Modules/CropVolume|Crop Volume]] <small>(loadable, built-in)</small> |
| − | + | == BWH, SUMS == | |
| − | + | * [[Documentation/Nightly/Modules/CornerAnnotation|Corner Annotation]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] extension)</small> | |
| − | * [ | + | == CARMA == |
| − | + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | |
| − | + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | |
| − | + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Boolean REMOVEFilter] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | |
| − | * [http:// | + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Connected Threshold Filter] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> |
| − | + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | |
| − | * [[Documentation/Nightly/Modules/ | + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Isolated Connected Filter] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> |
| − | + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | |
| − | + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | |
| − | * [[Documentation/Nightly/ | + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> |
| − | * [ | + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/LASegmentationWorkflow|LASegmentation Workflow]] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/ScarVisualization|Scar Visualization]] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> |
| − | + | == College of Information Engineering, Zhejiang University of Technology, Hangzhou, China); Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China == | |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Modules/GyroGuide|Gyro Guide]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] extension)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | == CRTC == |
| − | + | * [[Documentation/Nightly/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> | |
| − | * | + | * [[Documentation/Nightly/Modules/MeshCompression|Mesh Compression]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
| − | + | * [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] extension)</small> | |
| − | * [[Documentation/Nightly/Modules/ | + | == gatech == |
| − | + | * [[Documentation/Nightly/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]] <small>(cli, built-in)</small> | |
| − | * [[Documentation/Nightly/Modules/ | + | == GE == |
| − | * | + | * [[Documentation/Nightly/Modules/AddScalarVolumes|Add Scalar Volumes]] <small>(cli, built-in)</small> |
| − | * | + | * Charting <small>(scripted, built-in)</small> |
| − | + | * [[Documentation/Nightly/Modules/CheckerBoardFilter|Checker Board Filter]] <small>(cli, built-in)</small> | |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/CreateDICOMSeries|Create DICOMSeries]] <small>(cli, built-in)</small> |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]] <small>(cli, built-in)</small> |
| − | + | * Diffusion Tensor Test <small>(cli, built-in)</small> | |
| − | + | * DWIConvert <small>(cli, built-in)</small> | |
| − | + | * [[Documentation/Nightly/Modules/ExecutionModelTour|Execution Model Tour]] <small>(cli, built-in)</small> | |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]] <small>(cli, built-in)</small> |
| − | + | * [[Documentation/Nightly/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]] <small>(cli, built-in)</small> | |
| − | + | * [[Documentation/Nightly/Modules/GrayscaleGrindPeakImageFilter|Grayscale Grind Peak Image Filter]] <small>(cli, built-in)</small> | |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/GrayscaleModelMaker|Grayscale Model Maker]] <small>(cli, built-in)</small> |
| − | + | * [[Documentation/Nightly/Modules/HistogramMatching|Histogram Matching]] <small>(cli, built-in)</small> | |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/LabelMapSmoothing|Label Map Smoothing]] <small>(cli, built-in)</small> |
| − | + | * [[Documentation/Nightly/Modules/MedianImageFilter|Median Image Filter]] <small>(cli, built-in)</small> | |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/ModelMaker|Model Maker]] <small>(cli, built-in)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/ModelToLabelMap|Model To Label Map]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/Nightly/Modules/MultiplyScalarVolumes|Multiply Scalar Volumes]] <small>(cli, built-in)</small> |
| + | * [[Documentation/Nightly/Modules/OrientScalarVolume|Orient Scalar Volume]] <small>(cli, built-in)</small> | ||
| + | * [[Documentation/Nightly/Modules/OtsuThresholdImageFilter|Otsu Threshold Image Filter]] <small>(cli, built-in)</small> | ||
| + | * [[Documentation/Nightly/Modules/PkModeling|Pk Modeling]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PkModeling|Pk Modeling]] extension)</small> | ||
| + | * [[Documentation/Nightly/Modules/ResampleScalarVolume|Resample Scalar Volume]] <small>(cli, built-in)</small> | ||
| + | * [[Documentation/Nightly/Modules/SimpleRegionGrowingSegmentation|Simple Region Growing Segmentation]] <small>(cli, built-in)</small> | ||
| + | * [[Documentation/Nightly/Modules/SkullStripper|Skull Stripper]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/SkullStripper|Skull Stripper]] extension)</small> | ||
| + | * Slice Link Logic <small>(scripted, built-in)</small> | ||
| + | * Slicer4Minute <small>(scripted, built-in)</small> | ||
| + | * [[Documentation/Nightly/Extensions/IASEM|Spacing Aware Curvature Diffusion]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> | ||
| + | * [[Documentation/Nightly/Modules/SubtractScalarVolumes|Subtract Scalar Volumes]] <small>(cli, built-in)</small> | ||
* [[Documentation/Nightly/Modules/ViewControllers|View Controllers]] <small>(loadable, built-in)</small> | * [[Documentation/Nightly/Modules/ViewControllers|View Controllers]] <small>(loadable, built-in)</small> | ||
| − | * [[Documentation/Nightly/Modules/ | + | * View Controllers Slice Interpolation Bug1926 |
| − | * [ | + | * [[Documentation/Nightly/Modules/VotingBinaryHoleFillingImageFilter|Voting Binary Hole Filling Image Filter]] <small>(cli, built-in)</small> |
| − | == | + | == Georgia Institute of Technology == |
| − | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice Effect] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | |
| − | + | == Georgia Tech == | |
| − | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | |
| − | + | == IBM == | |
| − | + | * [[Documentation/Nightly/Modules/Annotations|Annotations]] <small>(loadable, built-in)</small> | |
| − | + | == Isomics == | |
| − | + | * Atlas Tests | |
| − | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice | + | * [[Documentation/Nightly/Extensions/IASEM|Binary Watershed Effect]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> |
| − | == Isomics | + | * [http://slicer.vmtk.org/ Centerline Computation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> |
| − | * [[Documentation/Nightly/Extensions/ | + | * [[Documentation/Nightly/Modules/CompareVolumes|Compare Volumes]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | |||
| − | * [ | ||
| − | * [[Documentation/Nightly/Modules/ | ||
* [[Documentation/Nightly/Modules/Data|Data]] <small>(loadable, built-in)</small> | * [[Documentation/Nightly/Modules/Data|Data]] <small>(loadable, built-in)</small> | ||
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/DataProbe|Data Probe]] <small>(scripted, built-in)</small> |
| − | + | * [[Documentation/Nightly/Modules/DICOM|DICOM]] <small>(scripted, built-in)</small> | |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/Editor|Editor]] <small>(scripted, built-in)</small> |
| − | + | * [[Documentation/Nightly/Modules/Endoscopy|Endoscopy]] <small>(scripted, built-in)</small> | |
| − | * [[Documentation/Nightly/Modules/ | ||
| − | * [[Documentation/Nightly/Modules/ | ||
| − | |||
| − | |||
* fiber visibility crash2438 | * fiber visibility crash2438 | ||
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]] <small>(scripted, built-in)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/LabelStatistics|Label Statistics]] <small>(scripted, built-in)</small> |
| − | |||
* label Toggle Bug2049 | * label Toggle Bug2049 | ||
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/LandmarkRegistration|Landmark Registration]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [http://slicer.vmtk.org/ Level Set Segmentation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> |
* [[Documentation/Nightly/Modules/Models|Models]] <small>(loadable, built-in)</small> | * [[Documentation/Nightly/Modules/Models|Models]] <small>(loadable, built-in)</small> | ||
| − | * [[Documentation/Nightly/Modules/ | + | * Performance Tests |
| − | + | * [[Documentation/Nightly/Modules/PETTumorSegmentationEffect|PETTumor Segmentation Effect]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PETTumorSegmentation|PETTumor Segmentation]] extension)</small> | |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Extensions/Reporting|Reporting]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/Reporting|Reporting]] extension)</small> |
| + | * RSNA2012Prostate Demo | ||
| + | * RSNAQuant Tutorial | ||
| + | * RSNAVis Tutorial | ||
* [[Documentation/Nightly/Modules/SampleData|Sample Data]] <small>(scripted, built-in)</small> | * [[Documentation/Nightly/Modules/SampleData|Sample Data]] <small>(scripted, built-in)</small> | ||
| − | * | + | * scene Import2428 |
| + | * Self Tests | ||
* [[Documentation/Nightly/Modules/SimpleFilters|Simple Filters]] <small>(scripted, built-in)</small> | * [[Documentation/Nightly/Modules/SimpleFilters|Simple Filters]] <small>(scripted, built-in)</small> | ||
| + | * slicer Close Crash Bug2590 | ||
* [[Documentation/Nightly/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small> | * [[Documentation/Nightly/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small> | ||
| − | * | + | * Tractography Interactive Seeding <small>(loadable, built-in)</small> |
| − | |||
* [[Documentation/Nightly/Modules/Transforms|Transforms]] <small>(loadable, built-in)</small> | * [[Documentation/Nightly/Modules/Transforms|Transforms]] <small>(loadable, built-in)</small> | ||
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/VectorToScalarVolume|Vector To Scalar Volume]] <small>(scripted, built-in)</small> |
| + | * [http://slicer.vmtk.org/ Vesselness Filtering] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
* [[Documentation/Nightly/Modules/ViewControllers|View Controllers]] <small>(loadable, built-in)</small> | * [[Documentation/Nightly/Modules/ViewControllers|View Controllers]] <small>(loadable, built-in)</small> | ||
* [[Documentation/Nightly/Modules/VolumeRendering|Volume Rendering]] <small>(loadable, built-in)</small> | * [[Documentation/Nightly/Modules/VolumeRendering|Volume Rendering]] <small>(loadable, built-in)</small> | ||
* [[Documentation/Nightly/Modules/Volumes|Volumes]] <small>(loadable, built-in)</small> | * [[Documentation/Nightly/Modules/Volumes|Volumes]] <small>(loadable, built-in)</small> | ||
| − | + | == Isomics Inc. == | |
| − | == | + | * DICOMDiffusion Volume Plugin |
| − | * | + | * DICOMLongitudinal PETCTPlugin |
| − | * | + | * DICOMScalar Volume Plugin |
| − | == | + | * DICOMSlicer Data Bundle Plugin |
| − | * [ | + | * Slicer MRBTest |
| − | + | * Threshold Threading Test | |
| − | + | == Isomics, Inc. == | |
| − | == | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice Effect] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> |
| + | == Isomics, pieper@isomics.com == | ||
* [[Documentation/Nightly/Extensions/XNATSlicer|Xnat Slicer]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] extension)</small> | * [[Documentation/Nightly/Extensions/XNATSlicer|Xnat Slicer]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] extension)</small> | ||
| − | == | + | == Kitware == |
| − | * [ | + | * [[Documentation/Nightly/Modules/Cameras|Cameras]] <small>(loadable, built-in)</small> |
| − | + | * [[Documentation/Nightly/Modules/Colors|Colors]] <small>(loadable, built-in)</small> | |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Modules/Data|Data]] <small>(loadable, built-in)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/DataStore|Data Store]] <small>(loadable, built-in)</small> |
| − | + | * Double Arrays <small>(loadable, built-in)</small> | |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/EventBroker|Event Broker]] |
| − | + | * [[Documentation/Nightly/Modules/ExpertAutomatedRegistration|Expert Automated Registration]] <small>(cli, built-in)</small> | |
| − | * | + | * [[Documentation/Nightly/Modules/ExtensionWizard|Extension Wizard]] <small>(scripted, built-in)</small> |
| − | * [ | + | * [[Documentation/Nightly/Modules/ExtractSkeleton|Extract Skeleton]] <small>(cli, built-in)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/FastGrowCut|Fast Grow Cut]] <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> |
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> |
| − | + | * fiber visibility crash2438 | |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Modules/FiducialRegistration|Fiducial Registration]] <small>(cli, built-in)</small> |
| − | + | * [[Documentation/Nightly/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]] <small>(cli, built-in)</small> | |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Modules/ImageMaker|Image Maker]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/ImageMaker|Image Maker]] extension)</small> |
| − | * [ | + | * label Toggle Bug2049 |
| − | * [[Documentation/Nightly/ | ||
| − | * [[Documentation/Nightly/Modules/ | ||
| − | |||
| − | * [[Documentation/Nightly/ | ||
| − | |||
* [[Documentation/Nightly/Modules/MatlabCommander|Matlab Commander]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> | * [[Documentation/Nightly/Modules/MatlabCommander|Matlab Commander]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> | ||
* [[Documentation/Nightly/Modules/MatlabModuleGenerator|Matlab Module Generator]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> | * [[Documentation/Nightly/Modules/MatlabModuleGenerator|Matlab Module Generator]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> | ||
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/Models|Models]] <small>(loadable, built-in)</small> |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Modules/MultiVolumeExplorer|Multi Volume Explorer]] <small>(loadable, built-in)</small> |
| − | + | * [[Documentation/Nightly/Modules/MultiVolumeImporter|Multi Volume Importer]] <small>(scripted, built-in)</small> | |
| − | + | * [[Documentation/Nightly/Modules/Reformat|Reformat]] <small>(loadable, built-in)</small> | |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Modules/SampleData|Sample Data]] <small>(scripted, built-in)</small> |
| − | * [[Documentation/Nightly/ | + | * Scene Performance <small>(scripted, built-in)</small> |
| − | + | * [[Documentation/Nightly/Modules/SimpleFilters|Simple Filters]] <small>(scripted, built-in)</small> | |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small> |
| − | + | * [[Documentation/Nightly/Modules/ThresholdScalarVolume|Threshold Scalar Volume]] <small>(cli, built-in)</small> | |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/TractographyDisplay|Tractography Display]] <small>(loadable, built-in)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/Transforms|Transforms]] <small>(loadable, built-in)</small> |
| − | + | * [[Documentation/Nightly/Modules/Units|Units]] <small>(loadable, built-in)</small> | |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Modules/ViewControllers|View Controllers]] <small>(loadable, built-in)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/VolumeRendering|Volume Rendering]] <small>(loadable, built-in)</small> |
| − | + | * [[Documentation/Nightly/Modules/Volumes|Volumes]] <small>(loadable, built-in)</small> | |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/Welcome|Welcome]] <small>(loadable, built-in)</small> |
| − | * [ | + | == Kitware) == |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/FinslerBacktracing|Finsler Backtracing]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]] extension)</small> |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Modules/FinslerTractography|Finsler Tractography]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]] extension)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | == MGH == |
| − | + | * [[Documentation/Nightly/Modules/DicomSroExport|Dicom Sro Export]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small> | |
| − | + | * [[Documentation/Nightly/Modules/PkModeling|Pk Modeling]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PkModeling|Pk Modeling]] extension)</small> | |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Extensions/SlicerRT|Plm Register]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | + | == Moka Creative, LLC, kumar.sunil.p@gmail.com == | |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Extensions/XNATSlicer|Xnat Slicer]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] extension)</small> |
| − | == | + | == MRC Harwell, Oxfordshire == |
| − | * [[Documentation/Nightly/ | + | * [https://github.com/Tomnl/Slicer-Wasp Wasp] <small>(scripted, bundled in [https://github.com/Tomnl/Slicer-Wasp Wasp] extension)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | == MSC/NLM == |
| − | * [[Documentation/Nightly/Extensions/ | + | * [[Documentation/Nightly/Extensions/IASEM|Label Object Statistics]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [[Documentation/Nightly/Extensions/ | + | * [[Documentation/Nightly/Modules/SimpleFilters|Simple Filters]] <small>(scripted, built-in)</small> |
| − | * [ | + | == Noware == |
| − | * [[Documentation/Nightly/Extensions/ | + | * [[Documentation/Nightly/Modules/SwissSkullStripper|Swiss Skull Stripper]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]] extension)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | == Orobix == |
| − | * [[Documentation/Nightly/Modules/ | + | * [http://slicer.vmtk.org/ Centerline Computation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> |
| − | * [ | + | * [http://slicer.vmtk.org/ Level Set Segmentation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Modules/SurfaceToolbox|Surface Toolbox]] <small>(scripted, built-in)</small> |
| − | * [[Documentation/Nightly/ | + | * [http://slicer.vmtk.org/ Vesselness Filtering] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> |
| − | * [ | + | == PerkLab at Queen's University == |
| − | * [[Documentation/Nightly/Extensions/ | + | * [[Documentation/Nightly/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] extension)</small> |
| − | * [[Documentation/Nightly/ | + | == PerkLab, Queen's == |
| − | * [[Documentation/Nightly/Extensions/ | + | * [[Documentation/Nightly/Extensions/Sequences|Metafile Importer]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/Sequences|Sequences]] extension)</small> |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Extensions/Sequences|Sequence Browser]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/Sequences|Sequences]] extension)</small> |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Extensions/Sequences|Sequences]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/Sequences|Sequences]] extension)</small> |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Modules/Transforms|Transforms]] <small>(loadable, built-in)</small> |
| − | == Queen's University | + | == PerkLab, Queen's Universit == |
| − | + | * [[Documentation/Nightly/Extensions/SlicerIGT|Model Registration]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small> | |
| − | + | == PerkLab, Queen's University == | |
| − | |||
* [[Documentation/Nightly/Modules/MatlabCommander|Matlab Commander]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> | * [[Documentation/Nightly/Modules/MatlabCommander|Matlab Commander]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> | ||
* [[Documentation/Nightly/Modules/MatlabModuleGenerator|Matlab Module Generator]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> | * [[Documentation/Nightly/Modules/MatlabModuleGenerator|Matlab Module Generator]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> | ||
| − | + | * [[Documentation/Nightly/Modules/PlusRemote|Plus Remote]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small> | |
| − | + | * [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip With Model]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip]] extension)</small> | |
| − | + | == PMH == | |
| − | * [[Documentation/Nightly/Modules/ | + | * Colors Scalar Bar Self Test |
| − | + | * [[Documentation/Nightly/Extensions/Sequences|Sequence Browser]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/Sequences|Sequences]] extension)</small> | |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Extensions/Sequences|Sequences]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/Sequences|Sequences]] extension)</small> |
| − | == | + | == PMH, Toronto == |
| − | * [[Documentation/Nightly/Extensions/ | + | * [[Documentation/Nightly/Modules/Isodose|Isodose]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | + | == Princess Margaret Cancer Centre == | |
| − | + | * [[Documentation/Nightly/Modules/DicomSroExport|Dicom Sro Export]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small> | |
| − | == | + | * [[Documentation/Nightly/Modules/DicomSroImport|Dicom Sro Import]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | == Queen's == |
| − | == | + | * [[Documentation/Nightly/Extensions/SlicerRT|Beams]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Modules/Data|Data]] <small>(loadable, built-in)</small> |
| − | + | * DICOMScalar Volume Plugin | |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/DoseAccumulation|Dose Accumulation]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [[Documentation/Nightly/ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> |
| − | + | * [[Documentation/Nightly/Modules/Isodose|Isodose]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small> | |
| − | * | + | * [[Documentation/Nightly/Extensions/SlicerRT|Planar Image]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * | + | * [[Documentation/Nightly/Modules/SubjectHierarchy|Subject Hierarchy]] <small>(loadable, built-in)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * Subject Hierarchy Core Plugins Self Test |
| − | * [ | + | * Subject Hierarchy Generic Self Test |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Extensions/SlicerRT|Vff File Reader]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | + | == Queen's Universit == | |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Extensions/SlicerIGT|Fiducials To Model Registration]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | == Queen's University == |
| − | + | * [[Documentation/Nightly/Extensions/SlicerIGT|Breach Warning]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small> | |
| − | * [[Documentation/Nightly/Extensions/ | + | * [[Documentation/Nightly/Modules/CollectFiducials|Collect Fiducials]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | == | + | * [[Documentation/Nightly/Extensions/SlicerIGT|Create Models]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Extensions/SlicerRT|Dvh Comparison]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | + | * [[Documentation/Nightly/Extensions/SlicerIGT|Fiducial Registration Wizard]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small> | |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Extensions/SlicerIGT|Markups To Model]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | + | * [[Documentation/Nightly/Modules/OpenIGTLinkRemote|Open IGTLink Remote]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small> | |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/PerkEvaluator|Perk Evaluator]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small> |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Extensions/SlicerIGT|Pivot Calibration]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | + | * [[Documentation/Nightly/Extensions/PerkTutor|Python Metrics Calculator]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small> | |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis Monitoring]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis]] extension)</small> |
| − | * | + | * [[Documentation/Nightly/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis]] extension)</small> |
| − | * | + | * [[Documentation/Nightly/Extensions/SlicerIGT|Transform Fusion]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | + | * [[Documentation/Nightly/Modules/TransformRecorder|Transform Recorder]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small> | |
| − | + | * [[Documentation/Nightly/Extensions/SlicerIGT|Ultrasound Snapshots]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small> | |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/VolumeResliceDriver|Volume Reslice Driver]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | + | * [[Documentation/Nightly/Extensions/SlicerIGT|Watchdog]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small> | |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/WorkflowSegmentation|Workflow Segmentation]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] extension)</small> |
| − | * [[Documentation/Nightly/ | + | == Queen's University) Jaime Garcia-Guevara (Queen's University == |
| − | + | * Breach Warning Self Test | |
| − | * [[Documentation/Nightly/ | + | * Watchdog Self Test |
| − | + | == Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto == | |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Modules/MatlabCommander|Matlab Commander]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> |
| − | + | * [[Documentation/Nightly/Modules/MatlabModuleGenerator|Matlab Module Generator]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> | |
| − | * [[Documentation/Nightly/Modules/ | + | == RMP, PMH == |
| − | + | * Dicom Sro Import Plugin | |
| − | * [[Documentation/Nightly/ | + | == SAIC-Frederick, NCI-Frederick == |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Modules/VolumeRendering|Volume Rendering]] <small>(loadable, built-in)</small> |
| − | * [[Documentation/Nightly/ | + | == SBU == |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Modules/LAScarSegmenter|LAScar Segmenter]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small> |
| − | * [[Documentation/Nightly/ | + | == SCI Institute == |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Extensions/CleaverExtension|Cleaver CLI]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CleaverExtension|Cleaver Extension]] extension)</small> |
| − | + | == Shiga University of Medical Science == | |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small> |
| − | + | == Shiga University of Medical Science in Japan == | |
| − | * | ||
| − | * [[Documentation/Nightly/Modules/ | ||
| − | |||
| − | * [[Documentation/Nightly/ | ||
| − | |||
| − | * [[Documentation/Nightly/Modules/ | ||
| − | |||
| − | |||
| − | == | ||
| − | |||
| − | |||
| − | |||
* [[Documentation/Nightly/Modules/CornerAnnotation|Corner Annotation]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] extension)</small> | * [[Documentation/Nightly/Modules/CornerAnnotation|Corner Annotation]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] extension)</small> | ||
| − | == | + | == SINAPSE == |
| − | * [[Documentation/Nightly/Extensions/ | + | * [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures] <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] extension)</small> |
| − | == | + | == SNR == |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/PathExplorer|Path Explorer]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/TrackerStabilizer|Tracker Stabilizer]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small> |
| − | + | == SPL == | |
| − | * [[Documentation/Nightly/Modules/ | + | * DICOM2Full Brain Tractography <small>(scripted, built-in)</small> |
| − | + | * Label To DICOMSEGConverter Self Test | |
| − | * | + | * [[Documentation/Nightly/Modules/PkModeling|Pk Modeling]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PkModeling|Pk Modeling]] extension)</small> |
| − | + | * [[Documentation/Nightly/Modules/QuantitativeIndicesCLI|Quantitative Indices CLI]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PET-IndiC|PET-Indi C]] extension)</small> | |
| − | * | + | * [[Documentation/Nightly/Modules/QuantitativeIndicesTool|Quantitative Indices Tool]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PET-IndiC|PET-Indi C]] extension)</small> |
| − | == | + | * Reporting Self Test |
| − | * [[Documentation/Nightly/Extensions/ | + | * [[Documentation/Nightly/Modules/SUVFactorCalculator|SUVFactor Calculator]] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/TrackerStabilizer|Tracker Stabilizer]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | == SPL B&W Harvard == |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] extension)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | == SPL, BWH == |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/ACPCTransform|ACPCTransform]] <small>(cli, built-in)</small> |
| − | + | * [[Documentation/Nightly/Modules/Annotations|Annotations]] <small>(loadable, built-in)</small> | |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Modules/BSplineToDeformationField|BSpline To Deformation Field]] <small>(cli, built-in)</small> |
| − | + | * [[Documentation/Nightly/Modules/CastScalarVolume|Cast Scalar Volume]] <small>(cli, built-in)</small> | |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/Colors|Colors]] <small>(loadable, built-in)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/Data|Data]] <small>(loadable, built-in)</small> |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Modules/DiffusionTensorScalarMeasurements|Diffusion Tensor Scalar Measurements]] <small>(cli, built-in)</small> |
| − | + | * [[Documentation/Nightly/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]] <small>(cli, built-in)</small> | |
| − | * [[Documentation/Nightly/ | + | * DTIexport <small>(cli, built-in)</small> |
| − | + | * DTIimport <small>(cli, built-in)</small> | |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/DWIToDTIEstimation|DWITo DTIEstimation]] <small>(cli, built-in)</small> |
| − | * [ | + | * Fiber Tract Measurements <small>(cli, built-in)</small> |
| − | + | * [[Documentation/Nightly/Modules/FiducialRegistration|Fiducial Registration]] <small>(cli, built-in)</small> | |
| − | * [ | + | * [[Documentation/Nightly/Modules/GrayscaleModelMaker|Grayscale Model Maker]] <small>(cli, built-in)</small> |
| − | * [ | + | * [[Documentation/Nightly/Modules/ImageLabelCombine|Image Label Combine]] <small>(cli, built-in)</small> |
| − | + | * [[Documentation/Nightly/Modules/MaskScalarVolume|Mask Scalar Volume]] <small>(cli, built-in)</small> | |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Modules/MergeModels|Merge Models]] <small>(cli, built-in)</small> |
| − | + | * [[Documentation/Nightly/Modules/ModelMaker|Model Maker]] <small>(cli, built-in)</small> | |
| + | * [[Documentation/Nightly/Modules/Models|Models]] <small>(loadable, built-in)</small> | ||
| + | * [[Documentation/Nightly/Modules/ModelToLabelMap|Model To Label Map]] <small>(cli, built-in)</small> | ||
| + | * [[Documentation/Nightly/Modules/MultiVolumeExplorer|Multi Volume Explorer]] <small>(loadable, built-in)</small> | ||
| + | * [[Documentation/Nightly/Modules/MultiVolumeImporter|Multi Volume Importer]] <small>(scripted, built-in)</small> | ||
| + | * [[Documentation/Nightly/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]] <small>(cli, built-in)</small> | ||
| + | * [[Documentation/Nightly/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]] <small>(cli, built-in)</small> | ||
* [[Documentation/Nightly/Extensions/LongitudinalPETCT|PETSUVImage Maker]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|PETSUVImage Maker]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> | ||
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Modules/ProbeVolumeWithModel|Probe Volume With Model]] <small>(cli, built-in)</small> |
| − | * [[Documentation/Nightly/ | + | * [[Documentation/Nightly/Extensions/Reporting|Reporting]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/Reporting|Reporting]] extension)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]] <small>(cli, built-in)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/SceneViews|Scene Views]] <small>(loadable, built-in)</small> |
* [[Documentation/Nightly/Modules/SUVFactorCalculator|SUVFactor Calculator]] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small> | * [[Documentation/Nightly/Modules/SUVFactorCalculator|SUVFactor Calculator]] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small> | ||
| − | + | * [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]] extension)</small> | |
| − | * [[Documentation/Nightly/Extensions/ | + | * Test Grid Transform Registration <small>(cli, built-in)</small> |
| − | + | * [[Documentation/Nightly/Modules/ThresholdScalarVolume|Threshold Scalar Volume]] <small>(cli, built-in)</small> | |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]] <small>(cli, built-in)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/ViewControllers|View Controllers]] <small>(loadable, built-in)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/VolumeRendering|Volume Rendering]] <small>(loadable, built-in)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/Volumes|Volumes]] <small>(loadable, built-in)</small> |
| − | == | + | * [[Documentation/Nightly/Modules/Welcome|Welcome]] <small>(loadable, built-in)</small> |
| − | * [[Documentation/Nightly/Modules/ | + | == SPL, BWH, UPenn == |
| + | * [[Documentation/Nightly/Modules/MergeModels|Merge Models]] <small>(cli, built-in)</small> | ||
| + | == Stony Brook University == | ||
| + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice Effect] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
| + | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] <small>(scripted, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> | ||
| + | == SUMS == | ||
| + | * [[Documentation/Nightly/Modules/CornerAnnotation|Corner Annotation]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] extension)</small> | ||
| + | == Surgical Planning Lab == | ||
| + | * [[Documentation/Nightly/Extensions/Reporting|Label To DICOMSEGConverter]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/Reporting|Reporting]] extension)</small> | ||
| + | == UAB == | ||
* [[Documentation/Nightly/Modules/LAScarSegmenter|LAScar Segmenter]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small> | * [[Documentation/Nightly/Modules/LAScarSegmenter|LAScar Segmenter]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small> | ||
| − | + | * [[Documentation/Nightly/Modules/SobolevSegmenter|Sobolev Segmenter]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/SobolevSegmenter|Sobolev Segmenter]] extension)</small> | |
| − | * [[Documentation/Nightly/Modules/ | + | == UHN, Toronto == |
| − | + | * [[Documentation/Nightly/Modules/DoseAccumulation|Dose Accumulation]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small> | |
| − | * [[Documentation/Nightly/Modules/ | + | == Uiowa == |
| − | == | + | * DWIConvert <small>(cli, built-in)</small> |
| − | * | + | == UIowa == |
| − | == | + | * DWIConvert <small>(cli, built-in)</small> |
| − | * [[Documentation/Nightly/Extensions/ | + | == UNC == |
| − | + | * [[Documentation/Nightly/Extensions/DeveloperToolsForExtensions|Developer Tools For Extensions]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/DeveloperToolsForExtensions|Developer Tools For Extensions]] extension)</small> | |
| − | * [[Documentation/Nightly/Modules/ | + | * [[Documentation/Nightly/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]] <small>(cli, built-in)</small> |
| − | + | * [[Documentation/Nightly/Modules/ExtractSkeleton|Extract Skeleton]] <small>(cli, built-in)</small> | |
| − | + | * [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small> | |
| − | * [[ | + | * [[Documentation/Nightly/Modules/ResampleDTIVolume|Resample DTIVolume]] <small>(cli, built-in)</small> |
| − | + | * [[Documentation/Nightly/Modules/ResampleScalarVectorDWIVolume|Resample Scalar Vector DWIVolume]] <small>(cli, built-in)</small> | |
| − | + | == Univ of Michigan == | |
| − | * [[ | + | * [[Documentation/Nightly/Extensions/CMFreg|Surface Registration]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [[ | + | == Univ. of Iowa == |
| − | + | * [[Documentation/Nightly/Modules/DICOMPETSUVPlugin|DICOMPETSUVPlugin]] | |
| − | * [[ | + | * [[Documentation/Nightly/Modules/DICOMRWVMPlugin|DICOMRWVMPlugin]] |
| − | + | * [[Documentation/Nightly/Extensions/PET-IndiC|PETIndi C]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PET-IndiC|PET-Indi C]] extension)</small> | |
| − | * [[ | + | == University 'Magna Graecia' of Catanzaro == |
| − | * [[ | + | * [[Documentation/Nightly/Extensions/SlicerRT|Plastimatch Py]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] extension)</small> |
| − | * [[ | + | == University College Cork == |
| − | + | * [[Documentation/Nightly/Modules/AirwaySegmentation|Airway Segmentation]] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation] extension)</small> | |
| − | * [[ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation CLI] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation] extension)</small> |
| − | + | == University of Alabama Birmingham == | |
| − | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice Effect] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | |
| − | * [[ | + | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] <small>(scripted, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> |
| − | * [ | + | == University of Heidelberg == |
| − | + | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> | |
| − | + | == University of Iowa == | |
| − | + | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|PETSUVImage Maker]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> | |
| − | + | * [[Documentation/Nightly/Extensions/PETTumorSegmentation|PETTumor Segmentation]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/PETTumorSegmentation|PETTumor Segmentation]] extension)</small> | |
| − | * [ | + | * [[Documentation/Nightly/Modules/PETTumorSegmentationEffect|PETTumor Segmentation Effect]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PETTumorSegmentation|PETTumor Segmentation]] extension)</small> |
| − | + | * [[Documentation/Nightly/Modules/QuantitativeIndicesCLI|Quantitative Indices CLI]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PET-IndiC|PET-Indi C]] extension)</small> | |
| − | * [ | + | * [[Documentation/Nightly/Modules/QuantitativeIndicesTool|Quantitative Indices Tool]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PET-IndiC|PET-Indi C]] extension)</small> |
| − | + | * [[Documentation/Nightly/Modules/SUVFactorCalculator|SUVFactor Calculator]] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small> | |
| − | + | == University of Iowa) and Andrey Fedorov (SPL == | |
| − | + | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> | |
| − | * [[ | + | == UPenn == |
| − | + | * [[Documentation/Nightly/Modules/Annotations|Annotations]] <small>(loadable, built-in)</small> | |
| − | * [[ | + | * [[Documentation/Nightly/Modules/EMSegment|EMSegment]] <small>(loadable, built-in)</small> |
| − | * [[ | + | * [[Documentation/Nightly/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]] <small>(cli, built-in)</small> |
| − | * [[ | + | * [[Documentation/Nightly/Modules/SceneViews|Scene Views]] <small>(loadable, built-in)</small> |
| − | + | == Utah == | |
| − | * [[ | + | * [[Documentation/Nightly/Modules/LabelMapSmoothing|Label Map Smoothing]] <small>(cli, built-in)</small> |
| − | * [[ | + | * [[Documentation/Nightly/Modules/LAScarSegmenter|LAScar Segmenter]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small> |
| − | + | == UVa == | |
| − | * [[ | + | * [[Documentation/Nightly/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]] <small>(cli, built-in)</small> |
| − | * [[ | + | * [[Documentation/Nightly/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]] <small>(cli, built-in)</small> |
| − | + | * [[Documentation/Nightly/Modules/DWIUnbiasedNonLocalMeansFilter|DWIUnbiased Non Local Means Filter]] <small>(cli, built-in)</small> | |
| − | * [[ | + | == UWA == |
| − | * [[ | + | * [[Documentation/Nightly/Modules/ThingiverseBrowser|Thingiverse Browser]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ThingiverseBrowser|Thingiverse Browser]] extension)</small> |
| − | * [[ | + | == WashU-St. Louis, dmarcus@wustl.edu == |
| − | * [[ | + | * [[Documentation/Nightly/Extensions/XNATSlicer|Xnat Slicer]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] extension)</small> |
| − | * [[ | + | == while at GE == |
| − | * [[ | + | * [[Documentation/Nightly/Modules/PkModeling|Pk Modeling]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PkModeling|Pk Modeling]] extension)</small> |
| − | * [[ | + | = Modules by contributing individual = |
| − | * [[ | + | 194 contributing individuals: |
| − | + | * [[#|']] | |
| − | * [[ | + | * [[#.29|)]] |
| − | * [[ | + | * [[#A|A]] |
| − | * [[ | + | * [[#a|a]] |
| − | + | * [[#Akila_Viswanathan|Akila Viswanathan]] | |
| − | * [[ | + | * [[#Alan_Morris|Alan Morris]] <small>(Utah)</small> |
| − | * [[# | + | * [[#Alex_Yarmakovich|Alex Yarmakovich]] <small>(Isomics)</small> |
| − | * [[# | + | * [[#Alex_Yarmarkovich|Alex Yarmarkovich]] <small>(Kitware))</small> |
| − | * [[# | + | * [[#Ali_Ghayoor|Ali Ghayoor]] |
| − | * [[# | + | * [[#Alireza_Mehrtash|Alireza Mehrtash]] <small>(SPL and BWH)</small> |
| − | * [[# | + | * [[#Allen_Tannenbaum|Allen Tannenbaum]] <small>(Stony Brook University)</small> |
| − | * [[# | + | * [[#Amelie_Meyer|Amelie Meyer]] <small>(PerkLab, Queen's University)</small> |
| − | * [[# | + | * [[#Analysis_Laboratory|Analysis Laboratory]] |
| − | + | * [[#Andras_Lasso|Andras Lasso]] <small>(PerkLab, Queen's Universit)</small> | |
| − | * [[# | + | * [[#Andreas_Freudling|Andreas Freudling]] <small>(SPL, BWH)</small> |
| − | * [[# | + | * [[#Andrey_Fedorov|Andrey Fedorov]] <small>(SPL B&W Harvard)</small> |
| − | * [[# | + | * [[#Andriy_Kot|Andriy Kot]] <small>(CRTC)</small> |
| − | * [[# | + | * [[#Anonymous|Anonymous]] |
| − | * [[# | + | * [[#Antonio_Damato|Antonio Damato]] |
| − | * [[# | + | * [[#Antonio_Tristan_Vega|Antonio Tristan Vega]] <small>(UVa)</small> |
| − | + | * [[#Anuja_Sharma|Anuja Sharma]] | |
| − | * [[# | + | * [[#Arie_Nakhmani|Arie Nakhmani]] <small>(UAB)</small> |
| − | * [[# | + | * [[#Atsushi_Yamada|Atsushi Yamada]] <small>(Shiga University of Medical Science)</small> |
| − | * [[# | + | * [[#b|b]] |
| − | * [[# | + | * [[#Beatriz_Paniagua_from_Department_of_Orthodontics|Beatriz Paniagua from Department of Orthodontics]] <small>(UNC)</small> |
| − | * [[# | + | * [[#Benjamin_Long|Benjamin Long]] <small>(Kitware)</small> |
| − | * [[# | + | * [[#Benjamin_Yvernault|Benjamin Yvernault]] |
| − | * [[# | + | * [[#Bill_Lorensen|Bill Lorensen]] <small>(Noware)</small> |
| − | * [[# | + | * [[#Brad_Davis|Brad Davis]] |
| − | * [[# | + | * [[#Bradley_Lowekamp|Bradley Lowekamp]] <small>(MSC/NLM)</small> |
| − | * [[# | + | * [[#Brian_Zenger|Brian Zenger]] <small>(CARMA)</small> |
| − | * [[# | + | * [[#BWH|BWH]] |
| − | * [[# | + | * [[#C|C]] |
| − | * [[# | + | * [[#Carl-Fredrik_Westin._The_directional_iterators_were_contributed_by_Luis_Ibanez|Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez]] <small>(Kitware))</small> |
| − | * [[# | + | * [[#Casey_B_Goodlett|Casey B Goodlett]] <small>(Kitware)</small> |
| − | * [[# | + | * [[#Charles_Marion|Charles Marion]] <small>(Kitware)</small> |
| − | * [[# | + | * [[#Christian_Bauer|Christian Bauer]] <small>(Univ. of Iowa)</small> |
| − | * [[# | + | * [[#Csaba_Pinter|Csaba Pinter]] <small>(PerkLab, Queen's University)</small> |
| − | * [[# | + | * [[#d|d]] |
| − | * [[# | + | * [[#Dan_Marcus|Dan Marcus]] <small>(Washington University in St. Louis)</small> |
| − | * [[# | + | * [[#Daniel_Blezek|Daniel Blezek]] <small>(GE)</small> |
| − | + | * [[#Daniel_Haehn|Daniel Haehn]] <small>(UPenn)</small> | |
| − | * [[# | + | * [[#Danny_Perry|Danny Perry]] <small>(Utah)</small> |
| − | * [[# | + | * [[#Demian_Wassermann|Demian Wassermann]] <small>(Brigham and Women's Hospital)</small> |
| − | * [[# | + | * [[#Dirk_Padfield|Dirk Padfield]] <small>(GE)</small> |
| − | * [[# | + | * [[#Dominik_Meier|Dominik Meier]] <small>(SPL, BWH)</small> |
| − | * [[# | + | * [[#e|e]] |
| − | * [[# | + | * [[#Ethan_Ulrich|Ethan Ulrich]] <small>(Univ. of Iowa)</small> |
| − | + | * [[#Eugene_Kholmovski|Eugene Kholmovski]] <small>(CARMA)</small> | |
| − | * [[# | + | * [[#ez|ez]] <small>(UVa)</small> |
| − | * [[# | + | * [[#Fotis_Drakopoulos|Fotis Drakopoulos]] <small>(CRTC)</small> |
| − | * [[# | + | * [[#Francois_Budin|Francois Budin]] <small>(NIRAL, UNC)</small> |
| − | * [[# | + | * [[#Franklin_King|Franklin King]] <small>(PerkLab, Queen's University)</small> |
| − | * [[# | + | * [[#g|g]] |
| − | * [[# | + | * [[#Gopalkrishna_Veni|Gopalkrishna Veni]] |
| − | * [[# | + | * [[#Greg_Gardner|Greg Gardner]] <small>(Utah)</small> |
| − | * [[# | + | * [[#Greg_Harris|Greg Harris]] |
| − | * [[# | + | * [[#Gregory_Sharp|Gregory Sharp]] <small>(MGH)</small> |
| − | * [[# | + | * [[#Guido_Gerig|Guido Gerig]] <small>(UNC)</small> |
| − | * [[# | + | * [[#Guillaume_Pernelle|Guillaume Pernelle]] |
| − | * [[# | + | * [[#H|H]] |
| − | * [[# | + | * [[#Hans_J._Johnson|Hans J. Johnson]] |
| − | * [[# | + | * [[#Hans_Johnson|Hans Johnson]] <small>(SINAPSE)</small> |
| − | * [[# | + | * [[#hans-johnson_-at-_uiowa.edu|hans-johnson -at- uiowa.edu]] |
| − | * [[# | + | * [[#http:.2F.2Fwww.psychiatry.uiowa.edu|http://www.psychiatry.uiowa.edu]] |
| − | * [[# | + | * [[#i|i]] |
| − | * [[# | + | * [[#Idk|Idk]] |
| − | * [[# | + | * [[#Ipek_Oguz|Ipek Oguz]] |
| − | * [[# | + | * [[#Ivan_Kolesov|Ivan Kolesov]] <small>(Stony Brook University)</small> |
| − | * [[# | + | * [[#Jaime_Garcia_Guevara|Jaime Garcia Guevara]] <small>(Queen's University)</small> |
| − | * [[# | + | * [[#Jaime_Garcia-Guevara|Jaime Garcia-Guevara]] <small>(Queen's University)</small> |
| − | * [[# | + | * [[#Jan_Egger|Jan Egger]] |
| − | * [[# | + | * [[#Jayender_Jagadeesan|Jayender Jagadeesan]] <small>(BWH)</small> |
| − | * [[# | + | * [[#Jean-Baptiste_Berger|Jean-Baptiste Berger]] <small>(Kitware)</small> |
| − | * [[# | + | * [[#Jean-Christophe_Fillion-Robin|Jean-Christophe Fillion-Robin]] <small>(Kitware)</small> |
| − | + | * [[#Jennifer_Andrea|Jennifer Andrea]] <small>(PerkLab, Queen's University)</small> | |
| − | * [[# | + | * [[#Jessica_Forbes|Jessica Forbes]] <small>(SINAPSE)</small> |
| − | + | * [[#Jim_Miller|Jim Miller]] <small>(GE)</small> | |
| − | * [[# | + | * [[#Johan_Andruejol|Johan Andruejol]] <small>(Kitware)</small> |
| − | * [[# | + | * [[#John_Buatti|John Buatti]] <small>(Univ. of Iowa)</small> |
| − | * [[# | + | * [[#John_Evans|John Evans]] <small>(MGH)</small> |
| − | * [[# | + | * [[#Jonathan_Bronson|Jonathan Bronson]] <small>(SCI Institute)</small> |
| − | * [[# | + | * [[#Josh_Cates|Josh Cates]] <small>(Utah)</small> |
| − | * [[# | + | * [[#Joy_Matsui|Joy Matsui]] <small>(UIowa)</small> |
| − | * [[# | + | * [[#Julien_Finet|Julien Finet]] <small>(Kitware)</small> |
| − | * [[# | + | * [[#Julien_Jomier|Julien Jomier]] <small>(Kitware)</small> |
| − | * [[# | + | * [[#Junichi_Tokuda|Junichi Tokuda]] <small>(BWH)</small> |
| − | * [[# | + | * [[#K|K]] |
| − | * [[# | + | * [[#Kent_Williams|Kent Williams]] <small>(UIowa)</small> |
| − | * [[# | + | * [[#Kent_WIlliams|Kent WIlliams]] |
| − | * [[# | + | * [[#Kevin_Wang|Kevin Wang]] <small>(Princess Margaret Cancer Centre)</small> |
| − | * [[# | + | * [[#Kilian_Pohl|Kilian Pohl]] <small>(UPenn)</small> |
| − | * [[# | + | * [[#Koichiro_Murakami|Koichiro Murakami]] <small>(SUMS)</small> |
| − | * [[# | + | * [[#Kyle_Sunderl|Kyle Sunderl]] <small>(Queen's University)</small> |
| − | * [[# | + | * [[#L|L]] |
| − | * [[# | + | * [[#Lauren_Barber|Lauren Barber]] |
| − | * [[# | + | * [[#Lauren_O_Donnell|Lauren O'Donnell]] <small>(SPL, BWH)</small> |
| − | * [[# | + | * [[#Laurent_Chauvin|Laurent Chauvin]] <small>(BWH)</small> |
| − | * [[# | + | * [[#Liangjia_Zhu|Liangjia Zhu]] <small>(Stony Brook University)</small> |
| − | * [[# | + | * [[#Luca_Antiga|Luca Antiga]] <small>(Orobix)</small> |
| − | + | * [[#Luping_Fang|Luping Fang]] <small>(College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)</small> | |
| − | * [[# | + | * [[#Marc_Niethammer|Marc Niethammer]] <small>(UNC)</small> |
| − | * [[# | + | * [[#Mark_Scully|Mark Scully]] <small>(Uiowa)</small> |
| − | + | * [[#Markus_Van_Tol|Markus Van Tol]] <small>(University of Iowa) and Andrey Fedorov (SPL)</small> | |
| − | * [[# | + | * [[#Markus_van_Tol|Markus van Tol]] <small>(Univ. of Iowa)</small> |
| − | * [[# | + | * [[#Martin_Styner|Martin Styner]] <small>(UNC)</small> |
| − | * [[# | + | * [[#Mason_Winsauer|Mason Winsauer]] |
| − | + | * [[#Matt_Lougheed|Matt Lougheed]] <small>(PerkLab, Queen's University)</small> | |
| − | * [[# | + | * [[#Matthew_Holden|Matthew Holden]] <small>(Queen's University)</small> |
| − | * [[# | + | * [[#Matthew_S._Holden|Matthew S. Holden]] <small>(Queen's University)</small> |
| − | * [[# | + | * [[#Matthew_Woehlke|Matthew Woehlke]] <small>(Kitware)</small> |
| − | * [[# | + | * [[#Michael_Jeulin-Lagarrigue|Michael Jeulin-Lagarrigue]] <small>(Kitware)</small> |
| − | * [[# | + | * [[#n|n]] |
| − | * [[# | + | * [[#N|N]] |
| − | * [[# | + | * [[#Nabgha_Fahrat|Nabgha Fahrat]] |
| − | * [[# | + | * [[#Neuro_Image_Resarch|Neuro Image Resarch]] |
| − | * [[# | + | * [[#Nicholas_Herlambang|Nicholas Herlambang]] <small>(AZE R&D)</small> |
| − | * [[# | + | * [[#Nick_Tustison|Nick Tustison]] <small>(UPenn)</small> |
| − | * [[# | + | * [[#Nicole_Aucoin|Nicole Aucoin]] <small>(BWH)</small> |
| − | * [[# | + | * [[#Nigel_Goh|Nigel Goh]] <small>(UWA)</small> |
| − | * [[# | + | * [[#Nikos_Chrisochoides|Nikos Chrisochoides]] <small>(CRTC)</small> |
| − | * [[# | + | * [[#o|o]] |
| − | * [[# | + | * [[#Olivier_Clatz|Olivier Clatz]] <small>(Asclepios INRIA) and Nikos Chrisochoides (CRTC)</small> |
| − | * [[# | + | * [[#P|P]] |
| − | * [[# | + | * [[#Paolo_Zaffino|Paolo Zaffino]] <small>(University 'Magna Graecia' of Catanzaro)</small> |
| − | + | * [[#Pat_Marion|Pat Marion]] <small>(Kitware)</small> | |
| − | * [[# | + | * [[#Patricio_Vela|Patricio Vela]] <small>(Georgia Institute of Technology)</small> |
| − | * [[# | + | * [[#Paul_Mercea|Paul Mercea]] <small>(University of Heidelberg)</small> |
| − | * [[# | + | * [[#Pengdong_Xiao|Pengdong Xiao]] <small>(Department of Orthodontics, UNC)</small> |
| − | * [[# | + | * [[#Peter_Black|Peter Black]] <small>(BWH)</small> |
| − | * [[# | + | * [[#Peter_Karasev|Peter Karasev]] <small>(Georgia Tech)</small> |
| − | + | * [[#Peter_Savadjiev|Peter Savadjiev]] <small>(Kitware))</small> | |
| − | + | * [[#Pierre_Seroul|Pierre Seroul]] <small>(UNC)</small> | |
| − | * [[# | + | * [[#Pietro_Nardelli|Pietro Nardelli]] <small>(University College Cork)</small> |
| − | * [[# | + | * [[#Please_direct_questions_or_suggestions_to_http:.2F.2Fgroups.google.com.2Fgroup.2Fplastimatch|Please direct questions or suggestions to http://groups.google.com/group/plastimatch]] |
| − | * [[# | + | * [[#Polina_Goll|Polina Goll]] |
| − | * [[# | + | * [[#Q|Q]] |
| − | * [[# | + | * [[#Qing_Pan|Qing Pan]] <small>(College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)</small> |
| − | + | * [[#r|r]] | |
| − | + | * [[#Raul_San_Jose|Raul San Jose]] <small>(SPL, BWH)</small> | |
| − | * [[# | + | * [[#Reinhard_Beichel|Reinhard Beichel]] <small>(University of Iowa)</small> |
| − | * [[# | + | * [[#Reinhard_R._Beichel|Reinhard R. Beichel]] <small>(Univ. of Iowa)</small> |
| − | * [[# | + | * [[#Rob_MacLeod|Rob Mac Leod]] <small>(Utah)</small> |
| − | * [[# | + | * [[#Ron_Kikinis|Ron Kikinis]] <small>(BWH)</small> |
| − | * [[# | + | * [[#Ross_Whitaker|Ross Whitaker]] <small>(Utah)</small> |
| − | * [[# | + | * [[#Ruifeng_Chen|Ruifeng Chen]] <small>(College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)</small> |
| − | * [[# | + | * [[#S|S]] |
| − | + | * [[#s|s]] | |
| − | + | * [[#Salma_Bengali|Salma Bengali]] <small>(CARMA)</small> | |
| − | + | * [[#Sam_Song|Sam Song]] | |
| − | * | + | * [[#Santiago_Aja_Fern|Santiago Aja Fern]] <small>(UVa)</small> |
| − | + | * [[#Sebastian_Tauscher|Sebastian Tauscher]] <small>(LUH)</small> | |
| − | + | * [[#Sebastien_Barr_eacute.3B|Sebastien Barré]] <small>(Kitware)</small> | |
| − | + | * [[#Sebastien_Barre|Sebastien Barre]] | |
| − | + | * [[#Shigeyuki_Naka|Shigeyuki Naka]] <small>(SUMS)</small> | |
| − | + | * [[#Soichiro_Tani|Soichiro Tani]] <small>(BWH, SUMS)</small> | |
| − | + | * [[#Sonia_Pujol|Sonia Pujol]] <small>(SPL, BWH)</small> | |
| − | * [[ | + | * [[#Stephen_Aylward|Stephen Aylward]] <small>(Kitware)</small> |
| − | + | * [[#Stephen_R_Aylward|Stephen R Aylward]] <small>(Kitware)</small> | |
| − | + | * [[#Steve_Pieper|Steve Pieper]] <small>(Isomics Inc.)</small> | |
| − | * [ | + | * [[#Sunil_Kumar|Sunil Kumar]] <small>(Moka Creative, LLC, kumar.sunil.p@gmail.com)</small> |
| − | * [ | + | * [[#Sylvain_Gouttard|Sylvain Gouttard]] |
| − | * [ | + | * [[#T|T]] |
| − | * [ | + | * [[#t|t]] |
| − | * [ | + | * [[#Tamas_Ungi|Tamas Ungi]] <small>(Queen's Universit)</small> |
| − | * [ | + | * [[#the_University_of_North_Carolina_at_Chapel_Hill|the University of North Carolina at Chapel Hill]] <small>(UNC)</small> |
| − | * [ | + | * [[#Thomas_Lawson|Thomas Lawson]] <small>(MRC Harwell, Oxfordshire)</small> |
| − | * [ | + | * [[#Tina_Kapur|Tina Kapur]] |
| − | * [ | + | * [[#Tobias_Penzkofer|Tobias Penzkofer]] |
| − | * [ | + | * [[#Tohru_Tani|Tohru Tani]] <small>(SUMS)</small> |
| − | * [[ | + | * [[#u|u]] |
| − | * [[ | + | * [[#U|U]] |
| − | * [[ | + | * [[#UNC_Medical_School|UNC Medical School]] |
| − | + | * [[#UofM_School_Of_Dentistry|Uof M School Of Dentistry]] | |
| − | * [[ | + | * [[#UofM_School_of_Dentistry|Uof M School of Dentistry]] |
| − | * | + | * [[#v|v]] |
| − | + | * [[#Vince_Magnotta|Vince Magnotta]] <small>(UIowa)</small> | |
| − | * [[ | + | * [[#Vincent_A._Magnotta|Vincent A. Magnotta]] |
| − | * | + | * [[#Vincent_Magnotta|Vincent Magnotta]] |
| − | * [[ | + | * [[#Vinicius_Boen|Vinicius Boen]] <small>(Univ of Michigan)</small> |
| − | * [[ | + | * [[#Vivek_Narayan|Vivek Narayan]] <small>(BWH)</small> |
| − | * [[ | + | * [[#W|W]] |
| − | * [[ | + | * [[#Wendy_Plesniak|Wendy Plesniak]] <small>(SPL, BWH)</small> |
| − | * [[ | + | * [[#Xiaodong_Tao|Xiaodong Tao]] <small>(GE)</small> |
| − | * [[ | + | * [[#Xiaojun_Chen|Xiaojun Chen]] |
| − | + | * [[#y_Wells|y Wells]] | |
| − | * | + | * [[#Yanling_Liu|Yanling Liu]] <small>(SAIC-Frederick, NCI-Frederick)</small> |
| − | * | + | * [[#Yi_Gao|Yi Gao]] <small>(BWH/UAB)</small> |
| − | + | * [[#Yinglin_Lee|Yinglin Lee]] <small>(SPL, BWH)</small> | |
| + | * [[#Yingxuan_Zhu|Yingxuan Zhu]] <small>(GE)</small> | ||
| + | * [[#Yixun_Liu|Yixun Liu]] <small>(CRTC)</small> | ||
| + | * [[#Yong_Zhang|Yong Zhang]] <small>(IBM)</small> | ||
| + | * [[#Yumin_Yuan|Yumin Yuan]] | ||
| + | * [[#Yundi_Shi|Yundi Shi]] | ||
| + | == ' == | ||
| + | * Dicom Rt Import Export Plugin | ||
| + | == ) == | ||
| + | * Dicom Rt Import Export Plugin | ||
| + | == A == | ||
| + | * Dicom Rt Import Export Plugin | ||
| + | == a == | ||
| + | * Dicom Rt Import Export Plugin | ||
| + | == Akila Viswanathan == | ||
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/iGyne|i Gyne]] extension)</small> | * [[Documentation/Nightly/Extensions/iGyne|i Gyne]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/iGyne|i Gyne]] extension)</small> | ||
* [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]] extension)</small> | * [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]] extension)</small> | ||
| − | * [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]] extension)</small> | + | == Alan Morris == |
| + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Boolean REMOVEFilter] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Connected Threshold Filter] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Isolated Connected Filter] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit LASegmentation Graph Cuts] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| + | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| + | * [[Documentation/Nightly/Modules/LAScarSegmenter|LAScar Segmenter]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small> | ||
| + | * [[Documentation/Nightly/Modules/LASegmentationWorkflow|LASegmentation Workflow]] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| + | * [[Documentation/Nightly/Modules/ScarVisualization|Scar Visualization]] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| + | == Alex Yarmakovich == | ||
| + | * [[Documentation/Nightly/Modules/Models|Models]] <small>(loadable, built-in)</small> | ||
| + | * Tractography Interactive Seeding <small>(loadable, built-in)</small> | ||
| + | == Alex Yarmarkovich == | ||
| + | * [[Documentation/Nightly/Modules/Data|Data]] <small>(loadable, built-in)</small> | ||
| + | * Fiber Tract Measurements <small>(cli, built-in)</small> | ||
| + | * [[Documentation/Nightly/Modules/FinslerBacktracing|Finsler Backtracing]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]] extension)</small> | ||
| + | * [[Documentation/Nightly/Modules/FinslerTractography|Finsler Tractography]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]] extension)</small> | ||
| + | * [[Documentation/Nightly/Modules/ImageLabelCombine|Image Label Combine]] <small>(cli, built-in)</small> | ||
| + | * [[Documentation/Nightly/Modules/Transforms|Transforms]] <small>(loadable, built-in)</small> | ||
| + | * [[Documentation/Nightly/Modules/VolumeRendering|Volume Rendering]] <small>(loadable, built-in)</small> | ||
| + | * [[Documentation/Nightly/Modules/Volumes|Volumes]] <small>(loadable, built-in)</small> | ||
| + | == Ali Ghayoor == | ||
| + | * BRAINSTransform Convert <small>(cli, built-in)</small> | ||
| + | * Perform Metric Test <small>(cli, built-in)</small> | ||
| + | == Alireza Mehrtash == | ||
| + | * [[Documentation/Nightly/Extensions/iGyne|i Gyne]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/iGyne|i Gyne]] extension)</small> | ||
| + | * [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]] extension)</small> | ||
| + | * [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]] extension)</small> | ||
== Allen Tannenbaum == | == Allen Tannenbaum == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice Effect] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice Effect] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
| Line 2,746: | Line 2,746: | ||
== XNATSlicer == | == XNATSlicer == | ||
* [[Documentation/Nightly/Extensions/XNATSlicer|Xnat Slicer]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] extension)</small> | * [[Documentation/Nightly/Extensions/XNATSlicer|Xnat Slicer]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] extension)</small> | ||
| + | = Extensions by category = | ||
| + | 25 categories: | ||
| + | * [[#Cardiac|Cardiac]] | ||
| + | * [[#Cardiac_MRI_toolkit|Cardiac MRI toolkit]] | ||
| + | * [[#Converters|Converters]] | ||
| + | * [[#Developer_Tools|Developer Tools]] | ||
| + | * [[#Diffusion|Diffusion]] | ||
| + | * [[#Editor_Effects|Editor Effects]] | ||
| + | * [[#Exporter|Exporter]] | ||
| + | * [[#IGT|IGT]] | ||
| + | * [[#Informatics|Informatics]] | ||
| + | * [[#Mesh_Generation|Mesh Generation]] | ||
| + | * [[#Microscopy|Microscopy]] | ||
| + | * [[#Nuclear_Medicine|Nuclear Medicine]] | ||
| + | * [[#Quantification|Quantification]] | ||
| + | * [[#Radiotherapy|Radiotherapy]] | ||
| + | * [[#Registration|Registration]] | ||
| + | * [[#Remote|Remote]] | ||
| + | * [[#Scoliosis|Scoliosis]] | ||
| + | * [[#Segmentation|Segmentation]] | ||
| + | * [[#Sequences|Sequences]] | ||
| + | * [[#Shape_Analysis|Shape Analysis]] | ||
| + | * [[#Tractography|Tractography]] | ||
| + | * [[#Training|Training]] | ||
| + | * [[#Utilities|Utilities]] | ||
| + | * [[#Vascular_Modeling_Toolkit|Vascular Modeling Toolkit]] | ||
| + | * [[#Wizards|Wizards]] | ||
| + | == Cardiac == | ||
| + | * [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] | ||
| + | == Cardiac MRI toolkit == | ||
| + | * [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] | ||
| + | == Converters == | ||
| + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] | ||
| + | == Developer Tools == | ||
| + | * [[Documentation/Nightly/Extensions/ImageMaker|Image Maker]] | ||
| + | * [[Documentation/Nightly/Extensions/DeveloperToolsForExtensions|Developer Tools For Extensions]] | ||
| + | * [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] | ||
| + | * [[Documentation/Nightly/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] | ||
| + | == Diffusion == | ||
| + | * [[Documentation/Nightly/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] | ||
| + | == Editor Effects == | ||
| + | * [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] | ||
| + | == Exporter == | ||
| + | * [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] | ||
| + | == IGT == | ||
| + | * [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]] | ||
| + | * [[Documentation/Nightly/Extensions/LightWeightRobotIGT|Light Weight Robot IGT]] | ||
| + | * [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] | ||
| + | * [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] | ||
| + | * [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] | ||
| + | * [[Documentation/Nightly/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] | ||
| + | * [[Documentation/Nightly/Extensions/NeedleFinder|Needle Finder]] | ||
| + | * [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] | ||
| + | * [[Documentation/Nightly/Extensions/iGyne|i Gyne]] | ||
| + | * [[Documentation/Nightly/Extensions/ResectionPlanner|Resection Planner]] | ||
| + | == Informatics == | ||
| + | * [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]] | ||
| + | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] | ||
| + | * [[Documentation/Nightly/Extensions/Reporting|Reporting]] | ||
| + | * [[Documentation/Nightly/Extensions/TCIABrowser|TCIABrowser]] | ||
| + | == Mesh Generation == | ||
| + | * [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] | ||
| + | * [[Documentation/Nightly/Extensions/CleaverExtension|Cleaver Extension]] | ||
| + | == Microscopy == | ||
| + | * [[Documentation/Nightly/Extensions/IASEM|IASEM]] | ||
| + | == Nuclear Medicine == | ||
| + | * [http://gti-fing.github.io/SlicerPetSpectAnalysis Pet Spect Analysis] | ||
| + | == Quantification == | ||
| + | * [[Documentation/Nightly/Extensions/DiceComputation|Dice Computation]] | ||
| + | * [[Documentation/Nightly/Extensions/PET-IndiC|PET-Indi C]] | ||
| + | * [[Documentation/Nightly/Extensions/PkModeling|Pk Modeling]] | ||
| + | == Radiotherapy == | ||
| + | * [[Documentation/Nightly/Extensions/SlicerRT|Slicer RT]] | ||
| + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] | ||
| + | == Registration == | ||
| + | * [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] | ||
| + | * [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] | ||
| + | == Remote == | ||
| + | * [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] | ||
| + | == Scoliosis == | ||
| + | * [[Documentation/Nightly/Extensions/Scoliosis|Scoliosis]] | ||
| + | == Segmentation == | ||
| + | * [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] | ||
| + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | ||
| + | * [[Documentation/Nightly/Extensions/SkullStripper|Skull Stripper]] | ||
| + | * [[Documentation/Nightly/Extensions/PETTumorSegmentation|PETTumor Segmentation]] | ||
| + | * [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]] | ||
| + | * [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] | ||
| + | * [[Documentation/Nightly/Extensions/IntensitySegmenter|Intensity Segmenter]] | ||
| + | * [https://github.com/Tomnl/Slicer-Wasp Wasp] | ||
| + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation] | ||
| + | * [[Documentation/Nightly/Extensions/SobolevSegmenter|Sobolev Segmenter]] | ||
| + | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | ||
| + | * [[Documentation/Nightly/Extensions/VolumeClip|Volume Clip]] | ||
| + | == Sequences == | ||
| + | * [[Documentation/Nightly/Extensions/Sequences|Sequences]] | ||
| + | == Shape Analysis == | ||
| + | * [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]] | ||
| + | == Tractography == | ||
| + | * [[Documentation/Nightly/Extensions/FinslerTractography|Finsler Tractography]] | ||
| + | == Training == | ||
| + | * [[Documentation/Nightly/Extensions/PerkTutor|Perk Tutor]] | ||
| + | == Utilities == | ||
| + | * [[Documentation/Nightly/Extensions/ThingiverseBrowser|Thingiverse Browser]] | ||
| + | == Vascular Modeling Toolkit == | ||
| + | * [http://slicer.vmtk.org/ VMTK] | ||
| + | == Wizards == | ||
| + | * [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] | ||
= Extensions by name = | = Extensions by name = | ||
56 extensions: | 56 extensions: | ||
| Line 2,804: | Line 2,912: | ||
* [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] | * [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] | ||
* [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] | * [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] | ||
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= Extensions by contributing organization = | = Extensions by contributing organization = | ||
59 contributing organizations: | 59 contributing organizations: | ||
Revision as of 00:18, 17 April 2015
Home < Documentation < Nightly < ModuleExtensionListing
- Modules by category
- Modules by name
- Modules by contributing organization
- Modules by contributing individual
- Modules by type
- Modules by extension
- Extensions by category
- Extensions by name
- Extensions by contributing organization
- Extensions by contributing individual
Modules by category
36 categories:
- BRAINS
- Cardiac MRI Toolkit
- CMF Registration
- Converters
- Developer Tools
- Diffusion
- Editor Effects
- Editor Effect
- Endoscopy
- Examples
- Exporter
- Filtering
- IGT
- Informatics
- Legacy
- Mesh Generation
- Mesh Generation
- Microscopy
- Multi Volume Support
- Perk Tutor
- Plastimatch
- Quantification
- Radiotherapy
- Registration
- Segmentation
- Sequences
- Shape Analysis
- Slicelets
- Surface Models
- Testing
- Unspecified
- Utilities
- Vascular Modeling Toolkit
- Wizards
- Work in Progress
- XNATSlicer
BRAINS
LabelStatistics
- BRAINSLabel Stats (cli, built-in)
Cardiac MRI Toolkit
- CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
- Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
- LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Automatic Left Atrial Scar (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit LASegmentation Graph Cuts (cli, bundled in Cardiac MRI Toolkit extension)
CMF Registration
- Apply Matrix (cli, bundled in CMFreg extension)
- Landmark Registration (scripted, bundled in CMFreg extension)
- Surface Registration (scripted, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Label Addition (cli, bundled in CMFreg extension)
- Downsize (cli, bundled in CMFreg extension)
Voxelbase Registration
- Mask Creation (cli, bundled in CMFreg extension)
- Non Growing (cli, bundled in CMFreg extension)
- Growing (cli, bundled in CMFreg extension)
Converters
- Vector To Scalar Volume (scripted, built-in)
- Crop Volume (loadable, built-in)
- Orient Scalar Volume (cli, built-in)
- Create DICOMSeries (cli, built-in)
Developer Tools
- Event Broker
- Execution Model Tour (cli, built-in)
- Double Arrays (loadable, built-in)
- Py Dev Remote Debug (scripted, bundled in Py Dev Remote Debug extension)
- Cameras (loadable, built-in)
- Developer Tools For Extensions (scripted, bundled in Developer Tools For Extensions extension)
- Extension Wizard (scripted, built-in)
- Image Maker (cli, bundled in Image Maker extension)
DICOM Plugins
- DICOMLongitudinal PETCTPlugin
- DICOMRWVMPlugin
- Multi Volume Importer Plugin
- DICOMPETSUVPlugin
- DICOMDiffusion Volume Plugin
- Dicom Rt Import Export Plugin
- DICOMSegmentation Plugin
- Dicom Sro Import Plugin
- DICOMScalar Volume Plugin
- DICOMSlicer Data Bundle Plugin
Editor Extensions
- Binary Watershed Effect (scripted, bundled in IASEM extension)
- Fast Grow Cut Effect (scripted, bundled in Fast Grow Cut Effect extension)
- Carrera Slice Effect (scripted, bundled in Carrera Slice extension)
- Double Threshold Effect (scripted, bundled in IASEM extension)
- PETTumor Segmentation Effect (scripted, bundled in PETTumor Segmentation extension)
Matlab
- Matlab Commander (cli, bundled in Matlab Bridge extension)
- Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
Diffusion
- Tractography Display (loadable, built-in)
- DICOM2Full Brain Tractography (scripted, built-in)
Diffusion Data Conversion
- DWIConvert (cli, built-in)
Diffusion Tensor Images
- Resample DTIVolume (cli, built-in)
- Diffusion Tensor Scalar Measurements (cli, built-in)
- Tractography Label Map Seeding (cli, built-in)
- Tractography Interactive Seeding (loadable, built-in)
Diffusion Weighted Images
- DWIRician LMMSEFilter (cli, built-in)
- Resample Scalar Vector DWIVolume (cli, built-in)
- DWITo DTIEstimation (cli, built-in)
- DWIJoint Rician LMMSEFilter (cli, built-in)
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
- Diffusion Weighted Volume Masking (cli, built-in)
FiberAnalysis
- DTIAtlas Fiber Analyzer (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Fiber Compare (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Merge Stat With Fiber (cli, bundled in DTIAtlas Fiber Analyzer extension)
- dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
Tractography
- Fiber Bundle To Label Map (scripted, built-in)
- Fiber Tract Measurements (cli, built-in)
- Fiber Bundle Label Select (cli, built-in)
Editor Effects
- Window Level Effect (scripted, bundled in Window Level Effect extension)
EditorEffect
- PETTumor Segmentation (loadable, bundled in PETTumor Segmentation extension)
Endoscopy
- Endoscopy (scripted, built-in)
Examples
- Fast Grow Cut (loadable, bundled in Fast Grow Cut Effect extension)
- Fast Grow Cut Segmenter (loadable, bundled in Carrera Slice extension)
- Carrera Slice (loadable, bundled in Carrera Slice extension)
Exporter
- Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
Filtering
- Extract Skeleton (cli, built-in)
- Threshold Scalar Volume (cli, built-in)
- N4ITKBias Field Correction (cli, built-in)
- Simple Filters (scripted, built-in)
- Image Label Combine (cli, built-in)
- Voting Binary Hole Filling Image Filter (cli, built-in)
- Histogram Matching (cli, built-in)
- Checker Board Filter (cli, built-in)
Arithmetic
- Multiply Scalar Volumes (cli, built-in)
- Add Scalar Volumes (cli, built-in)
- Cast Scalar Volume (cli, built-in)
- Subtract Scalar Volumes (cli, built-in)
- Mask Scalar Volume (cli, built-in)
Denoising
- Gradient Anisotropic Diffusion (cli, built-in)
- Median Image Filter (cli, built-in)
- Gaussian Blur Image Filter (cli, built-in)
- Curvature Anisotropic Diffusion (cli, built-in)
Morphology
- Grayscale Fill Hole Image Filter (cli, built-in)
- Grayscale Grind Peak Image Filter (cli, built-in)
IGT
- Light Weight Robot IGT (loadable, bundled in Light Weight Robot IGT extension)
- Volume Reslice Driver (loadable, bundled in Slicer IGT extension)
- Collect Fiducials (loadable, bundled in Slicer IGT extension)
- Create Models (loadable, bundled in Slicer IGT extension)
- Open IGTLink IF (loadable, built-in)
- Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)
- Path Explorer (loadable, bundled in Slicer IGT extension)
- Ultrasound Snapshots (loadable, bundled in Slicer IGT extension)
- Transform Fusion (loadable, bundled in Slicer IGT extension)
- Breach Warning (loadable, bundled in Slicer IGT extension)
- Markups To Model (loadable, bundled in Slicer IGT extension)
- Gyro Guide (scripted, bundled in Gyro Guide extension)
- Fiducial Registration Wizard (loadable, bundled in Slicer IGT extension)
- Watchdog (loadable, bundled in Slicer IGT extension)
- Open IGTLink Remote (loadable, bundled in Slicer IGT extension)
- Plus Remote (scripted, bundled in Slicer IGT extension)
- i Gyne (scripted, bundled in i Gyne extension)
- Model Registration (scripted, bundled in Slicer IGT extension)
- Fiducials To Model Registration (scripted, bundled in Slicer IGT extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
- Pivot Calibration (loadable, bundled in Slicer IGT extension)
- Corner Annotation (scripted, bundled in Corner Annotation extension)
Informatics
- Annotations (loadable, built-in)
- Markups (loadable, built-in)
- Units (loadable, built-in)
- DICOM (scripted, built-in)
- Sample Data (scripted, built-in)
- Subject Hierarchy (loadable, built-in)
- Data (loadable, built-in)
- Colors (loadable, built-in)
- Curve Maker (scripted, bundled in Curve Maker extension)
- TCIABrowser (scripted, bundled in TCIABrowser extension)
Legacy
Converters
- BSpline To Deformation Field (cli, built-in)
Diffusion
Denoising
- DWIUnbiased Non Local Means Filter (cli, built-in)
Diffusion Data Conversion
- DTIimport (cli, built-in)
- DTIexport (cli, built-in)
Filtering
- Otsu Threshold Image Filter (cli, built-in)
- Resample Scalar Volume (cli, built-in)
Registration
- Test Grid Transform Registration (cli, built-in)
- Expert Automated Registration (cli, built-in)
Work in Progress
Diffusion Tensor
Test
- Diffusion Tensor Test (cli, built-in)
Mesh Generation
- Cleaver CLI (cli, bundled in Cleaver Extension extension)
MeshGeneration
- Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
- Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
Microscopy
- Bin Shrink (cli, bundled in IASEM extension)
- Label Object Statistics (scripted, bundled in IASEM extension)
- Spacing Aware Curvature Diffusion (cli, bundled in IASEM extension)
- IASEMImport Series (cli, bundled in IASEM extension)
- IASEMImport (cli, bundled in IASEM extension)
MultiVolume Support
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
Perk Tutor
- Python Metrics Calculator (scripted, bundled in Perk Tutor extension)
- Workflow Segmentation (loadable, bundled in Perk Tutor extension)
- Transform Recorder (loadable, bundled in Perk Tutor extension)
- Perk Evaluator (loadable, bundled in Perk Tutor extension)
Plastimatch
- Dicom Sro Export (scripted, bundled in Slicer RT extension)
- Plm Register (scripted, bundled in Slicer RT extension)
Registration
- plastimatch slicer bspline (cli, bundled in Slicer RT extension)
- plastimatch slicer landwarp (cli, bundled in Slicer RT extension)
Utilities
- Plastimatch Py (loadable, bundled in Slicer RT extension)
Quantification
- d Pet Brain Quantification (scripted, bundled in Pet Spect Analysis extension)
- Quantitative Indices CLI (cli, bundled in PET-Indi C extension)
- PETStandard Uptake Value Computation (cli, built-in)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
- Spinal Curvature Measurement (scripted, bundled in Scoliosis extension)
- PETIndi C (scripted, bundled in PET-Indi C extension)
- Pk Modeling (cli, bundled in Pk Modeling extension)
- Heterogeneity CAD (scripted, bundled in Open CAD extension)
- Label Statistics (scripted, built-in)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- Dice Computation (loadable, bundled in Dice Computation extension)
- Data Probe (scripted, built-in)
- Quantitative Indices Tool (scripted, bundled in PET-Indi C extension)
ChangeQuantification
- Intensity Difference Metric (cli, bundled in Change Tracker extension)
Radiotherapy
- Beams (loadable, bundled in Slicer RT extension)
- Dvh Comparison (scripted, bundled in Slicer RT extension)
- Isodose (loadable, bundled in Slicer RT extension)
- Dose Accumulation (loadable, bundled in Slicer RT extension)
- Dicom Sro Import (loadable, bundled in Slicer RT extension)
- Planar Image (loadable, bundled in Slicer RT extension)
Registration
- BRAINSResample (cli, built-in)
- Transforms (loadable, built-in)
- BRAINSResize (cli, built-in)
- Perform Metric Test (cli, built-in)
- BRAINSFit (cli, built-in)
- PBNRR (cli, bundled in PBNRR extension)
Specialized
- ACPCTransform (cli, built-in)
- Fiducial Registration (cli, built-in)
- VBRAINSDemon Warp (cli, built-in)
- BRAINSDemon Warp (cli, built-in)
- Reformat (loadable, built-in)
Segmentation
- Airway Segmentation (scripted, bundled in Airway Segmentation extension)
- Editor (scripted, built-in)
- EMSegment Quick (loadable, built-in)
- Skull Stripper (cli, bundled in Skull Stripper extension)
- Simple Region Growing Segmentation (cli, built-in)
- EMSegment (loadable, built-in)
- Segment CAD (scripted, bundled in Open CAD extension)
- Airway Segmentation CLI (cli, bundled in Airway Segmentation extension)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- Sobolev Segmenter (cli, bundled in Sobolev Segmenter extension)
- Volume Clip With Model (scripted, bundled in Volume Clip extension)
- Wasp (scripted, bundled in Wasp extension)
- Swiss Skull Stripper (cli, bundled in Swiss Skull Stripper extension)
- Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
Specialized
- EMSegment Command Line (cli, built-in)
- Robust Statistics Segmenter (cli, built-in)
- BRAINSROIAuto (cli, built-in)
Sequences
- Metafile Importer (loadable, bundled in Sequences extension)
- Sequence Browser (loadable, bundled in Sequences extension)
- Sequences (loadable, bundled in Sequences extension)
Shape Analysis
- Mesh To Label Map (cli, bundled in Mesh To Label Map extension)
Slicelets
- Gel Dosimetry Analysis Algo (loadable, bundled in Gel Dosimetry Analysis extension)
Surface Models
- Model To Label Map (cli, built-in)
- Merge Models (cli, built-in)
- Surface Toolbox (scripted, built-in)
- Probe Volume With Model (cli, built-in)
- Grayscale Model Maker (cli, built-in)
- Label Map Smoothing (cli, built-in)
- Model Maker (cli, built-in)
Testing
- Slicer MRBTest
- Self Tests
- CLIROITest (cli, built-in)
- CLI4Test
- Threshold Threading Test
- Scoliosis Monitoring (scripted, bundled in Scoliosis extension)
- Performance Tests
IGT Tests
- Watchdog Self Test
- Breach Warning Self Test
TestCases
- Slice Link Logic (scripted, built-in)
- Atlas Tests
- RSNAQuant Tutorial
- Volume Rendering Scene Close (scripted, built-in)
- test tractography display
- slicer Close Crash Bug2590
- Subject Hierarchy Generic Self Test
- Charting (scripted, built-in)
- Scene Performance (scripted, built-in)
- Neurosurgical Planning Tutorial Markups Self Test
- Markups In Compare Viewers Self Test
- Cardiac Agatston Measures (scripted, bundled in Cardiac Agaston Measures extension)
- fiber visibility crash2438
- scene Import2428
- RSNAVis Tutorial
- JRC2013Vis
- RSNA2012Prostate Demo
- Add Many Markups Fiducial Test
- Colors Scalar Bar Self Test
- Markups In Views Self Test
- Change Tracker Self Test
- Fiducial Layout Switch Bug1914
- Subject Hierarchy Core Plugins Self Test
- View Controllers Slice Interpolation Bug1926
- Slicer4Minute (scripted, built-in)
- Crop Volume Self Test
- label Toggle Bug2049
Unspecified
- BRAINSDWICleanup (cli, built-in)
Utilities
- Thingiverse Browser (scripted, bundled in Thingiverse Browser extension)
- BRAINSStrip Rotation (cli, built-in)
- EMSegment Transform To New Format (cli, built-in)
- Data Store (loadable, built-in)
BRAINS
- BRAINSTransform Convert (cli, built-in)
Vascular Modeling Toolkit
- Vesselness Filtering (scripted, bundled in VMTK extension)
- Centerline Computation (scripted, bundled in VMTK extension)
- Level Set Segmentation (scripted, bundled in VMTK extension)
Wizards
- Compare Volumes (scripted, bundled in CMFreg extension)
- Change Tracker (scripted, bundled in Change Tracker extension)
Work in Progress
- Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)
Converters
- Label To DICOMSEGConverter (scripted, bundled in Reporting extension)
Informatics
TestCases
- Reporting Self Test
- Label To DICOMSEGConverter Self Test
XNATSlicer
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
Modules by name
208 modules:
- ACPCTransform (cli, built-in)
- Add Scalar Volumes (cli, built-in)
- Airway Segmentation (scripted, bundled in Airway Segmentation extension)
- Airway Segmentation CLI (cli, bundled in Airway Segmentation extension)
- Annotations (loadable, built-in)
- Apply Matrix (cli, bundled in CMFreg extension)
- Beams (loadable, bundled in Slicer RT extension)
- Bin Shrink (cli, bundled in IASEM extension)
- Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
- BRAINSDemon Warp (cli, built-in)
- BRAINSDWICleanup (cli, built-in)
- BRAINSFit (cli, built-in)
- BRAINSLabel Stats (cli, built-in)
- BRAINSResample (cli, built-in)
- BRAINSResize (cli, built-in)
- BRAINSROIAuto (cli, built-in)
- BRAINSStrip Rotation (cli, built-in)
- BRAINSTransform Convert (cli, built-in)
- Breach Warning (loadable, bundled in Slicer IGT extension)
- Carrera Slice (loadable, bundled in Carrera Slice extension)
- Cast Scalar Volume (cli, built-in)
- Centerline Computation (scripted, bundled in VMTK extension)
- Change Tracker (scripted, bundled in Change Tracker extension)
- Checker Board Filter (cli, built-in)
- Cleaver CLI (cli, bundled in Cleaver Extension extension)
- CMRToolkit Automatic Left Atrial Scar (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit LASegmentation Graph Cuts (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
- Collect Fiducials (loadable, bundled in Slicer IGT extension)
- Colors (loadable, built-in)
- Compare Volumes (scripted, bundled in CMFreg extension)
- Corner Annotation (scripted, bundled in Corner Annotation extension)
- Create DICOMSeries (cli, built-in)
- Create Models (loadable, bundled in Slicer IGT extension)
- Crop Volume (loadable, built-in)
- Curvature Anisotropic Diffusion (cli, built-in)
- Curve Maker (scripted, bundled in Curve Maker extension)
- Data (loadable, built-in)
- Data Probe (scripted, built-in)
- Data Store (loadable, built-in)
- Dice Computation (loadable, bundled in Dice Computation extension)
- DICOM (scripted, built-in)
- DICOM2Full Brain Tractography (scripted, built-in)
- Dicom Sro Export (scripted, bundled in Slicer RT extension)
- Dicom Sro Import (loadable, bundled in Slicer RT extension)
- Diffusion Tensor Scalar Measurements (cli, built-in)
- Diffusion Weighted Volume Masking (cli, built-in)
- Dose Accumulation (loadable, bundled in Slicer RT extension)
- Downsize (cli, bundled in CMFreg extension)
- d Pet Brain Quantification (scripted, bundled in Pet Spect Analysis extension)
- DTIAtlas Fiber Analyzer (cli, bundled in DTIAtlas Fiber Analyzer extension)
- dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Dvh Comparison (scripted, bundled in Slicer RT extension)
- DWIConvert (cli, built-in)
- DWIJoint Rician LMMSEFilter (cli, built-in)
- DWIRician LMMSEFilter (cli, built-in)
- DWITo DTIEstimation (cli, built-in)
- Editor (scripted, built-in)
- EMSegment (loadable, built-in)
- EMSegment Command Line (cli, built-in)
- EMSegment Quick (loadable, built-in)
- EMSegment Transform To New Format (cli, built-in)
- Endoscopy (scripted, built-in)
- Extract Skeleton (cli, built-in)
- Fast Grow Cut (loadable, bundled in Fast Grow Cut Effect extension)
- Fast Grow Cut Segmenter (loadable, bundled in Carrera Slice extension)
- Fiber Bundle Label Select (cli, built-in)
- Fiber Bundle To Label Map (scripted, built-in)
- Fiber Compare (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Fiber Tract Measurements (cli, built-in)
- Fiducial Registration (cli, built-in)
- Fiducial Registration Wizard (loadable, bundled in Slicer IGT extension)
- Fiducials To Model Registration (scripted, bundled in Slicer IGT extension)
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
- Gaussian Blur Image Filter (cli, built-in)
- Gel Dosimetry Analysis Algo (loadable, bundled in Gel Dosimetry Analysis extension)
- Gradient Anisotropic Diffusion (cli, built-in)
- Grayscale Fill Hole Image Filter (cli, built-in)
- Grayscale Grind Peak Image Filter (cli, built-in)
- Grayscale Model Maker (cli, built-in)
- Growing (cli, bundled in CMFreg extension)
- Gyro Guide (scripted, bundled in Gyro Guide extension)
- Heterogeneity CAD (scripted, bundled in Open CAD extension)
- Histogram Matching (cli, built-in)
- IASEMImport (cli, bundled in IASEM extension)
- IASEMImport Series (cli, bundled in IASEM extension)
- i Gyne (scripted, bundled in i Gyne extension)
- Image Label Combine (cli, built-in)
- Intensity Difference Metric (cli, bundled in Change Tracker extension)
- Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
- Isodose (loadable, bundled in Slicer RT extension)
- KUtil (scripted, bundled in Carrera Slice extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Label Map Smoothing (cli, built-in)
- Label Object Statistics (scripted, bundled in IASEM extension)
- Label Statistics (scripted, built-in)
- Label To DICOMSEGConverter (scripted, bundled in Reporting extension)
- Landmark Registration (scripted, bundled in CMFreg extension)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
- Level Set Segmentation (scripted, bundled in VMTK extension)
- Light Weight Robot IGT (loadable, bundled in Light Weight Robot IGT extension)
- Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)
- Markups (loadable, built-in)
- Markups To Model (loadable, bundled in Slicer IGT extension)
- Mask Creation (cli, bundled in CMFreg extension)
- Mask Scalar Volume (cli, built-in)
- Median Image Filter (cli, built-in)
- Merge Models (cli, built-in)
- Merge Stat With Fiber (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
- Mesh To Label Map (cli, bundled in Mesh To Label Map extension)
- Metafile Importer (loadable, bundled in Sequences extension)
- Model Maker (cli, built-in)
- Model Registration (scripted, bundled in Slicer IGT extension)
- Models (loadable, built-in)
- Model To Label Map (cli, built-in)
- Multiply Scalar Volumes (cli, built-in)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- N4ITKBias Field Correction (cli, built-in)
- Needle Finder (scripted, bundled in Needle Finder extension)
- Non Growing (cli, bundled in CMFreg extension)
- Open IGTLink IF (loadable, built-in)
- Open IGTLink Remote (loadable, bundled in Slicer IGT extension)
- Orient Scalar Volume (cli, built-in)
- Path Explorer (loadable, bundled in Slicer IGT extension)
- PBNRR (cli, bundled in PBNRR extension)
- Perform Metric Test (cli, built-in)
- Perk Evaluator (loadable, bundled in Perk Tutor extension)
- PETIndi C (scripted, bundled in PET-Indi C extension)
- PETStandard Uptake Value Computation (cli, built-in)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- PETTumor Segmentation (loadable, bundled in PETTumor Segmentation extension)
- Pivot Calibration (loadable, bundled in Slicer IGT extension)
- Pk Modeling (cli, bundled in Pk Modeling extension)
- Planar Image (loadable, bundled in Slicer RT extension)
- plastimatch slicer bspline (cli, bundled in Slicer RT extension)
- plastimatch slicer landwarp (cli, bundled in Slicer RT extension)
- Plastimatch Py (loadable, bundled in Slicer RT extension)
- Plm Register (scripted, bundled in Slicer RT extension)
- Plus Remote (scripted, bundled in Slicer IGT extension)
- Probe Volume With Model (cli, built-in)
- Python Metrics Calculator (scripted, bundled in Perk Tutor extension)
- Quantitative Indices CLI (cli, bundled in PET-Indi C extension)
- Quantitative Indices Tool (scripted, bundled in PET-Indi C extension)
- Reformat (loadable, built-in)
- Reporting (loadable, bundled in Reporting extension)
- Resample DTIVolume (cli, built-in)
- Resample Scalar Vector DWIVolume (cli, built-in)
- Robust Statistics Segmenter (cli, built-in)
- Sample Data (scripted, built-in)
- Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)
- Scene Views (loadable, built-in)
- Segment CAD (scripted, bundled in Open CAD extension)
- Sequence Browser (loadable, bundled in Sequences extension)
- Sequences (loadable, bundled in Sequences extension)
- Simple Filters (scripted, built-in)
- Simple Region Growing Segmentation (cli, built-in)
- Skull Stripper (cli, bundled in Skull Stripper extension)
- Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
- Sobolev Segmenter (cli, bundled in Sobolev Segmenter extension)
- Spacing Aware Curvature Diffusion (cli, bundled in IASEM extension)
- Spinal Curvature Measurement (scripted, bundled in Scoliosis extension)
- Subject Hierarchy (loadable, built-in)
- Subtract Scalar Volumes (cli, built-in)
- Surface Registration (scripted, bundled in CMFreg extension)
- Surface Toolbox (scripted, built-in)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
- Swiss Skull Stripper (cli, bundled in Swiss Skull Stripper extension)
- TCIABrowser (scripted, bundled in TCIABrowser extension)
- Thingiverse Browser (scripted, bundled in Thingiverse Browser extension)
- Threshold Scalar Volume (cli, built-in)
- Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)
- Tractography Display (loadable, built-in)
- Tractography Interactive Seeding (loadable, built-in)
- Tractography Label Map Seeding (cli, built-in)
- Transform Fusion (loadable, bundled in Slicer IGT extension)
- Transform Recorder (loadable, bundled in Perk Tutor extension)
- Transforms (loadable, built-in)
- Ultrasound Snapshots (loadable, bundled in Slicer IGT extension)
- Units (loadable, built-in)
- VBRAINSDemon Warp (cli, built-in)
- Vector To Scalar Volume (scripted, built-in)
- Vesselness Filtering (scripted, bundled in VMTK extension)
- Vff File Reader (loadable, bundled in Slicer RT extension)
- View Controllers (loadable, built-in)
- Volume Clip With Model (scripted, bundled in Volume Clip extension)
- Volume Rendering (loadable, built-in)
- Volume Reslice Driver (loadable, bundled in Slicer IGT extension)
- Volumes (loadable, built-in)
- Voting Binary Hole Filling Image Filter (cli, built-in)
- Wasp (scripted, bundled in Wasp extension)
- Watchdog (loadable, bundled in Slicer IGT extension)
- Welcome (loadable, built-in)
- Window Level Effect (scripted, bundled in Window Level Effect extension)
- Workflow Segmentation (loadable, bundled in Perk Tutor extension)
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
Modules by contributing organization
74 contributing organizations:
- Asclepios INRIA
- AZE R&D
- Boston Children's Hospital
- Brigham and Women's Hospital
- BWH
- BWH, SPL
- BWH, SUMS
- CARMA
- College of Information Engineering, Zhejiang University of Technology, Hangzhou, China); Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China
- CRTC
- gatech
- GE
- Georgia Institute of Technology
- Georgia Tech
- IBM
- Isomics
- Isomics Inc.
- Isomics, Inc.
- Isomics, pieper@isomics.com
- Kitware
- Kitware)
- MGH
- Moka Creative, LLC, kumar.sunil.p@gmail.com
- MRC Harwell, Oxfordshire
- MSC/NLM
- Noware
- Orobix
- Perk Lab at Queen's University
- Perk Lab, Queen's
- Perk Lab, Queen's Universit
- Perk Lab, Queen's University
- PMH
- PMH, Toronto
- Princess Margaret Cancer Centre
- Queen's
- Queen's Universit
- Queen's University
- Queen's University) Jaime Garcia-Guevara (Queen's University
- Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto
- RMP, PMH
- SAIC-Frederick, NCI-Frederick
- SBU
- SCI Institute
- Shiga University of Medical Science
- Shiga University of Medical Science in Japan
- SINAPSE
- SNR
- SPL
- SPL B&W Harvard
- SPL, BWH
- SPL, BWH, UPenn
- Stony Brook University
- SUMS
- Surgical Planning Lab
- UAB
- UHN, Toronto
- Uiowa
- UIowa
- UNC
- Univ of Michigan
- Univ. of Iowa
- University 'Magna Graecia' of Catanzaro
- University College Cork
- University of Alabama Birmingham
- University of Heidelberg
- University of Iowa
- University of Iowa) and Andrey Fedorov (SPL
- UPenn
- Utah
- UVa
- UWA
- Wash U-St. Louis, dmarcus@wustl.edu
- while at GE
Asclepios INRIA
AZE R&D
- JRC2013Vis
Boston Children's Hospital
- Centerline Computation (scripted, bundled in VMTK extension)
- Level Set Segmentation (scripted, bundled in VMTK extension)
- Vesselness Filtering (scripted, bundled in VMTK extension)
Brigham and Women's Hospital
- Corner Annotation (scripted, bundled in Corner Annotation extension)
- Surface Toolbox (scripted, built-in)
- test tractography display
- Volume Reslice Driver (loadable, bundled in Slicer IGT extension)
BWH
- Add Many Markups Fiducial Test
- Change Tracker Self Test
- Colors Scalar Bar Self Test
- Crop Volume Self Test
- Curve Maker (scripted, bundled in Curve Maker extension)
- Dice Computation (loadable, bundled in Dice Computation extension)
- DICOMRWVMPlugin
- Fast Grow Cut Effect (scripted, bundled in Fast Grow Cut Effect extension)
- Fiducial Layout Switch Bug1914
- Heterogeneity CAD (scripted, bundled in Open CAD extension)
- Markups (loadable, built-in)
- Markups In Compare Viewers Self Test
- Markups In Views Self Test
- Neurosurgical Planning Tutorial Markups Self Test
- Segment CAD (scripted, bundled in Open CAD extension)
- Volume Rendering Scene Close (scripted, built-in)
- Window Level Effect (scripted, bundled in Window Level Effect extension)
BWH, SPL
- Crop Volume (loadable, built-in)
BWH, SUMS
- Corner Annotation (scripted, bundled in Corner Annotation extension)
CARMA
- CMRToolkit Automatic Left Atrial Scar (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
- LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
- Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)
College of Information Engineering, Zhejiang University of Technology, Hangzhou, China); Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China
- Gyro Guide (scripted, bundled in Gyro Guide extension)
CRTC
- Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
- Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
- PBNRR (cli, bundled in PBNRR extension)
gatech
- Robust Statistics Segmenter (cli, built-in)
GE
- Add Scalar Volumes (cli, built-in)
- Charting (scripted, built-in)
- Checker Board Filter (cli, built-in)
- Create DICOMSeries (cli, built-in)
- Curvature Anisotropic Diffusion (cli, built-in)
- Diffusion Tensor Test (cli, built-in)
- DWIConvert (cli, built-in)
- Execution Model Tour (cli, built-in)
- Gradient Anisotropic Diffusion (cli, built-in)
- Grayscale Fill Hole Image Filter (cli, built-in)
- Grayscale Grind Peak Image Filter (cli, built-in)
- Grayscale Model Maker (cli, built-in)
- Histogram Matching (cli, built-in)
- Label Map Smoothing (cli, built-in)
- Median Image Filter (cli, built-in)
- Model Maker (cli, built-in)
- Model To Label Map (cli, built-in)
- Multiply Scalar Volumes (cli, built-in)
- Orient Scalar Volume (cli, built-in)
- Otsu Threshold Image Filter (cli, built-in)
- Pk Modeling (cli, bundled in Pk Modeling extension)
- Resample Scalar Volume (cli, built-in)
- Simple Region Growing Segmentation (cli, built-in)
- Skull Stripper (cli, bundled in Skull Stripper extension)
- Slice Link Logic (scripted, built-in)
- Slicer4Minute (scripted, built-in)
- Spacing Aware Curvature Diffusion (cli, bundled in IASEM extension)
- Subtract Scalar Volumes (cli, built-in)
- View Controllers (loadable, built-in)
- View Controllers Slice Interpolation Bug1926
- Voting Binary Hole Filling Image Filter (cli, built-in)
Georgia Institute of Technology
- Carrera Slice Effect (scripted, bundled in Carrera Slice extension)
Georgia Tech
- Carrera Slice (loadable, bundled in Carrera Slice extension)
IBM
- Annotations (loadable, built-in)
Isomics
- Atlas Tests
- Binary Watershed Effect (scripted, bundled in IASEM extension)
- Centerline Computation (scripted, bundled in VMTK extension)
- Compare Volumes (scripted, bundled in CMFreg extension)
- Data (loadable, built-in)
- Data Probe (scripted, built-in)
- DICOM (scripted, built-in)
- Editor (scripted, built-in)
- Endoscopy (scripted, built-in)
- fiber visibility crash2438
- Fiber Bundle To Label Map (scripted, built-in)
- Label Statistics (scripted, built-in)
- label Toggle Bug2049
- Landmark Registration (scripted, bundled in CMFreg extension)
- Level Set Segmentation (scripted, bundled in VMTK extension)
- Models (loadable, built-in)
- Performance Tests
- PETTumor Segmentation Effect (scripted, bundled in PETTumor Segmentation extension)
- Reporting (loadable, bundled in Reporting extension)
- RSNA2012Prostate Demo
- RSNAQuant Tutorial
- RSNAVis Tutorial
- Sample Data (scripted, built-in)
- scene Import2428
- Self Tests
- Simple Filters (scripted, built-in)
- slicer Close Crash Bug2590
- Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
- Tractography Interactive Seeding (loadable, built-in)
- Transforms (loadable, built-in)
- Vector To Scalar Volume (scripted, built-in)
- Vesselness Filtering (scripted, bundled in VMTK extension)
- View Controllers (loadable, built-in)
- Volume Rendering (loadable, built-in)
- Volumes (loadable, built-in)
Isomics Inc.
- DICOMDiffusion Volume Plugin
- DICOMLongitudinal PETCTPlugin
- DICOMScalar Volume Plugin
- DICOMSlicer Data Bundle Plugin
- Slicer MRBTest
- Threshold Threading Test
Isomics, Inc.
- Carrera Slice Effect (scripted, bundled in Carrera Slice extension)
Isomics, pieper@isomics.com
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
Kitware
- Cameras (loadable, built-in)
- Colors (loadable, built-in)
- Data (loadable, built-in)
- Data Store (loadable, built-in)
- Double Arrays (loadable, built-in)
- Event Broker
- Expert Automated Registration (cli, built-in)
- Extension Wizard (scripted, built-in)
- Extract Skeleton (cli, built-in)
- Fast Grow Cut (loadable, bundled in Fast Grow Cut Effect extension)
- Fast Grow Cut Segmenter (loadable, bundled in Carrera Slice extension)
- fiber visibility crash2438
- Fiducial Registration (cli, built-in)
- Gaussian Blur Image Filter (cli, built-in)
- Image Maker (cli, bundled in Image Maker extension)
- label Toggle Bug2049
- Matlab Commander (cli, bundled in Matlab Bridge extension)
- Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
- Models (loadable, built-in)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- Reformat (loadable, built-in)
- Sample Data (scripted, built-in)
- Scene Performance (scripted, built-in)
- Simple Filters (scripted, built-in)
- Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
- Threshold Scalar Volume (cli, built-in)
- Tractography Display (loadable, built-in)
- Transforms (loadable, built-in)
- Units (loadable, built-in)
- View Controllers (loadable, built-in)
- Volume Rendering (loadable, built-in)
- Volumes (loadable, built-in)
- Welcome (loadable, built-in)
Kitware)
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
MGH
- Dicom Sro Export (scripted, bundled in Slicer RT extension)
- Pk Modeling (cli, bundled in Pk Modeling extension)
- Plm Register (scripted, bundled in Slicer RT extension)
Moka Creative, LLC, kumar.sunil.p@gmail.com
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
MRC Harwell, Oxfordshire
MSC/NLM
- Label Object Statistics (scripted, bundled in IASEM extension)
- Simple Filters (scripted, built-in)
Noware
- Swiss Skull Stripper (cli, bundled in Swiss Skull Stripper extension)
Orobix
- Centerline Computation (scripted, bundled in VMTK extension)
- Level Set Segmentation (scripted, bundled in VMTK extension)
- Surface Toolbox (scripted, built-in)
- Vesselness Filtering (scripted, bundled in VMTK extension)
PerkLab at Queen's University
- Py Dev Remote Debug (scripted, bundled in Py Dev Remote Debug extension)
PerkLab, Queen's
- Metafile Importer (loadable, bundled in Sequences extension)
- Sequence Browser (loadable, bundled in Sequences extension)
- Sequences (loadable, bundled in Sequences extension)
- Transforms (loadable, built-in)
PerkLab, Queen's Universit
- Model Registration (scripted, bundled in Slicer IGT extension)
PerkLab, Queen's University
- Matlab Commander (cli, bundled in Matlab Bridge extension)
- Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
- Plus Remote (scripted, bundled in Slicer IGT extension)
- Volume Clip With Model (scripted, bundled in Volume Clip extension)
PMH
- Colors Scalar Bar Self Test
- Sequence Browser (loadable, bundled in Sequences extension)
- Sequences (loadable, bundled in Sequences extension)
PMH, Toronto
Princess Margaret Cancer Centre
- Dicom Sro Export (scripted, bundled in Slicer RT extension)
- Dicom Sro Import (loadable, bundled in Slicer RT extension)
Queen's
- Beams (loadable, bundled in Slicer RT extension)
- Data (loadable, built-in)
- DICOMScalar Volume Plugin
- Dose Accumulation (loadable, bundled in Slicer RT extension)
- Gel Dosimetry Analysis Algo (loadable, bundled in Gel Dosimetry Analysis extension)
- Isodose (loadable, bundled in Slicer RT extension)
- Planar Image (loadable, bundled in Slicer RT extension)
- Subject Hierarchy (loadable, built-in)
- Subject Hierarchy Core Plugins Self Test
- Subject Hierarchy Generic Self Test
- Vff File Reader (loadable, bundled in Slicer RT extension)
Queen's Universit
- Fiducials To Model Registration (scripted, bundled in Slicer IGT extension)
Queen's University
- Breach Warning (loadable, bundled in Slicer IGT extension)
- Collect Fiducials (loadable, bundled in Slicer IGT extension)
- Create Models (loadable, bundled in Slicer IGT extension)
- Dvh Comparison (scripted, bundled in Slicer RT extension)
- Fiducial Registration Wizard (loadable, bundled in Slicer IGT extension)
- Markups To Model (loadable, bundled in Slicer IGT extension)
- Open IGTLink Remote (loadable, bundled in Slicer IGT extension)
- Perk Evaluator (loadable, bundled in Perk Tutor extension)
- Pivot Calibration (loadable, bundled in Slicer IGT extension)
- Python Metrics Calculator (scripted, bundled in Perk Tutor extension)
- Scoliosis Monitoring (scripted, bundled in Scoliosis extension)
- Spinal Curvature Measurement (scripted, bundled in Scoliosis extension)
- Transform Fusion (loadable, bundled in Slicer IGT extension)
- Transform Recorder (loadable, bundled in Perk Tutor extension)
- Ultrasound Snapshots (loadable, bundled in Slicer IGT extension)
- Volume Reslice Driver (loadable, bundled in Slicer IGT extension)
- Watchdog (loadable, bundled in Slicer IGT extension)
- Workflow Segmentation (loadable, bundled in Perk Tutor extension)
Queen's University) Jaime Garcia-Guevara (Queen's University
- Breach Warning Self Test
- Watchdog Self Test
Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto
- Matlab Commander (cli, bundled in Matlab Bridge extension)
- Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
RMP, PMH
- Dicom Sro Import Plugin
SAIC-Frederick, NCI-Frederick
- Volume Rendering (loadable, built-in)
SBU
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
SCI Institute
- Cleaver CLI (cli, bundled in Cleaver Extension extension)
Shiga University of Medical Science
- Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
Shiga University of Medical Science in Japan
- Corner Annotation (scripted, bundled in Corner Annotation extension)
SINAPSE
- Cardiac Agatston Measures (scripted, bundled in Cardiac Agaston Measures extension)
SNR
- Path Explorer (loadable, bundled in Slicer IGT extension)
- Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)
SPL
- DICOM2Full Brain Tractography (scripted, built-in)
- Label To DICOMSEGConverter Self Test
- Pk Modeling (cli, bundled in Pk Modeling extension)
- Quantitative Indices CLI (cli, bundled in PET-Indi C extension)
- Quantitative Indices Tool (scripted, bundled in PET-Indi C extension)
- Reporting Self Test
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
- Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)
SPL B&W Harvard
SPL, BWH
- ACPCTransform (cli, built-in)
- Annotations (loadable, built-in)
- BSpline To Deformation Field (cli, built-in)
- Cast Scalar Volume (cli, built-in)
- Colors (loadable, built-in)
- Data (loadable, built-in)
- Diffusion Tensor Scalar Measurements (cli, built-in)
- Diffusion Weighted Volume Masking (cli, built-in)
- DTIexport (cli, built-in)
- DTIimport (cli, built-in)
- DWITo DTIEstimation (cli, built-in)
- Fiber Tract Measurements (cli, built-in)
- Fiducial Registration (cli, built-in)
- Grayscale Model Maker (cli, built-in)
- Image Label Combine (cli, built-in)
- Mask Scalar Volume (cli, built-in)
- Merge Models (cli, built-in)
- Model Maker (cli, built-in)
- Models (loadable, built-in)
- Model To Label Map (cli, built-in)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- N4ITKBias Field Correction (cli, built-in)
- PETStandard Uptake Value Computation (cli, built-in)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- Probe Volume With Model (cli, built-in)
- Reporting (loadable, bundled in Reporting extension)
- Robust Statistics Segmenter (cli, built-in)
- Scene Views (loadable, built-in)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
- TCIABrowser (scripted, bundled in TCIABrowser extension)
- Test Grid Transform Registration (cli, built-in)
- Threshold Scalar Volume (cli, built-in)
- Tractography Label Map Seeding (cli, built-in)
- View Controllers (loadable, built-in)
- Volume Rendering (loadable, built-in)
- Volumes (loadable, built-in)
- Welcome (loadable, built-in)
SPL, BWH, UPenn
- Merge Models (cli, built-in)
Stony Brook University
- Carrera Slice Effect (scripted, bundled in Carrera Slice extension)
- Fast Grow Cut Effect (scripted, bundled in Fast Grow Cut Effect extension)
SUMS
- Corner Annotation (scripted, bundled in Corner Annotation extension)
Surgical Planning Lab
- Label To DICOMSEGConverter (scripted, bundled in Reporting extension)
UAB
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- Sobolev Segmenter (cli, bundled in Sobolev Segmenter extension)
UHN, Toronto
- Dose Accumulation (loadable, bundled in Slicer RT extension)
Uiowa
- DWIConvert (cli, built-in)
UIowa
- DWIConvert (cli, built-in)
UNC
- Developer Tools For Extensions (scripted, bundled in Developer Tools For Extensions extension)
- DWIRician LMMSEFilter (cli, built-in)
- Extract Skeleton (cli, built-in)
- Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
- Resample DTIVolume (cli, built-in)
- Resample Scalar Vector DWIVolume (cli, built-in)
Univ of Michigan
- Surface Registration (scripted, bundled in CMFreg extension)
Univ. of Iowa
- DICOMPETSUVPlugin
- DICOMRWVMPlugin
- PETIndi C (scripted, bundled in PET-Indi C extension)
University 'Magna Graecia' of Catanzaro
- Plastimatch Py (loadable, bundled in Slicer RT extension)
University College Cork
- Airway Segmentation (scripted, bundled in Airway Segmentation extension)
- Airway Segmentation CLI (cli, bundled in Airway Segmentation extension)
University of Alabama Birmingham
- Carrera Slice Effect (scripted, bundled in Carrera Slice extension)
- Fast Grow Cut Effect (scripted, bundled in Fast Grow Cut Effect extension)
University of Heidelberg
- Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)
University of Iowa
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- PETTumor Segmentation (loadable, bundled in PETTumor Segmentation extension)
- PETTumor Segmentation Effect (scripted, bundled in PETTumor Segmentation extension)
- Quantitative Indices CLI (cli, bundled in PET-Indi C extension)
- Quantitative Indices Tool (scripted, bundled in PET-Indi C extension)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
University of Iowa) and Andrey Fedorov (SPL
- Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)
UPenn
- Annotations (loadable, built-in)
- EMSegment (loadable, built-in)
- N4ITKBias Field Correction (cli, built-in)
- Scene Views (loadable, built-in)
Utah
- Label Map Smoothing (cli, built-in)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
UVa
- DWIJoint Rician LMMSEFilter (cli, built-in)
- DWIRician LMMSEFilter (cli, built-in)
- DWIUnbiased Non Local Means Filter (cli, built-in)
UWA
- Thingiverse Browser (scripted, bundled in Thingiverse Browser extension)
WashU-St. Louis, dmarcus@wustl.edu
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
while at GE
- Pk Modeling (cli, bundled in Pk Modeling extension)
Modules by contributing individual
194 contributing individuals:
- '
- )
- A
- a
- Akila Viswanathan
- Alan Morris (Utah)
- Alex Yarmakovich (Isomics)
- Alex Yarmarkovich (Kitware))
- Ali Ghayoor
- Alireza Mehrtash (SPL and BWH)
- Allen Tannenbaum (Stony Brook University)
- Amelie Meyer (PerkLab, Queen's University)
- Analysis Laboratory
- Andras Lasso (PerkLab, Queen's Universit)
- Andreas Freudling (SPL, BWH)
- Andrey Fedorov (SPL B&W Harvard)
- Andriy Kot (CRTC)
- Anonymous
- Antonio Damato
- Antonio Tristan Vega (UVa)
- Anuja Sharma
- Arie Nakhmani (UAB)
- Atsushi Yamada (Shiga University of Medical Science)
- b
- Beatriz Paniagua from Department of Orthodontics (UNC)
- Benjamin Long (Kitware)
- Benjamin Yvernault
- Bill Lorensen (Noware)
- Brad Davis
- Bradley Lowekamp (MSC/NLM)
- Brian Zenger (CARMA)
- BWH
- C
- Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez (Kitware))
- Casey B Goodlett (Kitware)
- Charles Marion (Kitware)
- Christian Bauer (Univ. of Iowa)
- Csaba Pinter (PerkLab, Queen's University)
- d
- Dan Marcus (Washington University in St. Louis)
- Daniel Blezek (GE)
- Daniel Haehn (UPenn)
- Danny Perry (Utah)
- Demian Wassermann (Brigham and Women's Hospital)
- Dirk Padfield (GE)
- Dominik Meier (SPL, BWH)
- e
- Ethan Ulrich (Univ. of Iowa)
- Eugene Kholmovski (CARMA)
- ez (UVa)
- Fotis Drakopoulos (CRTC)
- Francois Budin (NIRAL, UNC)
- Franklin King (PerkLab, Queen's University)
- g
- Gopalkrishna Veni
- Greg Gardner (Utah)
- Greg Harris
- Gregory Sharp (MGH)
- Guido Gerig (UNC)
- Guillaume Pernelle
- H
- Hans J. Johnson
- Hans Johnson (SINAPSE)
- hans-johnson -at- uiowa.edu
- http://www.psychiatry.uiowa.edu
- i
- Idk
- Ipek Oguz
- Ivan Kolesov (Stony Brook University)
- Jaime Garcia Guevara (Queen's University)
- Jaime Garcia-Guevara (Queen's University)
- Jan Egger
- Jayender Jagadeesan (BWH)
- Jean-Baptiste Berger (Kitware)
- Jean-Christophe Fillion-Robin (Kitware)
- Jennifer Andrea (PerkLab, Queen's University)
- Jessica Forbes (SINAPSE)
- Jim Miller (GE)
- Johan Andruejol (Kitware)
- John Buatti (Univ. of Iowa)
- John Evans (MGH)
- Jonathan Bronson (SCI Institute)
- Josh Cates (Utah)
- Joy Matsui (UIowa)
- Julien Finet (Kitware)
- Julien Jomier (Kitware)
- Junichi Tokuda (BWH)
- K
- Kent Williams (UIowa)
- Kent WIlliams
- Kevin Wang (Princess Margaret Cancer Centre)
- Kilian Pohl (UPenn)
- Koichiro Murakami (SUMS)
- Kyle Sunderl (Queen's University)
- L
- Lauren Barber
- Lauren O'Donnell (SPL, BWH)
- Laurent Chauvin (BWH)
- Liangjia Zhu (Stony Brook University)
- Luca Antiga (Orobix)
- Luping Fang (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
- Marc Niethammer (UNC)
- Mark Scully (Uiowa)
- Markus Van Tol (University of Iowa) and Andrey Fedorov (SPL)
- Markus van Tol (Univ. of Iowa)
- Martin Styner (UNC)
- Mason Winsauer
- Matt Lougheed (PerkLab, Queen's University)
- Matthew Holden (Queen's University)
- Matthew S. Holden (Queen's University)
- Matthew Woehlke (Kitware)
- Michael Jeulin-Lagarrigue (Kitware)
- n
- N
- Nabgha Fahrat
- Neuro Image Resarch
- Nicholas Herlambang (AZE R&D)
- Nick Tustison (UPenn)
- Nicole Aucoin (BWH)
- Nigel Goh (UWA)
- Nikos Chrisochoides (CRTC)
- o
- Olivier Clatz (Asclepios INRIA) and Nikos Chrisochoides (CRTC)
- P
- Paolo Zaffino (University 'Magna Graecia' of Catanzaro)
- Pat Marion (Kitware)
- Patricio Vela (Georgia Institute of Technology)
- Paul Mercea (University of Heidelberg)
- Pengdong Xiao (Department of Orthodontics, UNC)
- Peter Black (BWH)
- Peter Karasev (Georgia Tech)
- Peter Savadjiev (Kitware))
- Pierre Seroul (UNC)
- Pietro Nardelli (University College Cork)
- Please direct questions or suggestions to http://groups.google.com/group/plastimatch
- Polina Goll
- Q
- Qing Pan (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
- r
- Raul San Jose (SPL, BWH)
- Reinhard Beichel (University of Iowa)
- Reinhard R. Beichel (Univ. of Iowa)
- Rob Mac Leod (Utah)
- Ron Kikinis (BWH)
- Ross Whitaker (Utah)
- Ruifeng Chen (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
- S
- s
- Salma Bengali (CARMA)
- Sam Song
- Santiago Aja Fern (UVa)
- Sebastian Tauscher (LUH)
- Sebastien Barré (Kitware)
- Sebastien Barre
- Shigeyuki Naka (SUMS)
- Soichiro Tani (BWH, SUMS)
- Sonia Pujol (SPL, BWH)
- Stephen Aylward (Kitware)
- Stephen R Aylward (Kitware)
- Steve Pieper (Isomics Inc.)
- Sunil Kumar (Moka Creative, LLC, kumar.sunil.p@gmail.com)
- Sylvain Gouttard
- T
- t
- Tamas Ungi (Queen's Universit)
- the University of North Carolina at Chapel Hill (UNC)
- Thomas Lawson (MRC Harwell, Oxfordshire)
- Tina Kapur
- Tobias Penzkofer
- Tohru Tani (SUMS)
- u
- U
- UNC Medical School
- Uof M School Of Dentistry
- Uof M School of Dentistry
- v
- Vince Magnotta (UIowa)
- Vincent A. Magnotta
- Vincent Magnotta
- Vinicius Boen (Univ of Michigan)
- Vivek Narayan (BWH)
- W
- Wendy Plesniak (SPL, BWH)
- Xiaodong Tao (GE)
- Xiaojun Chen
- y Wells
- Yanling Liu (SAIC-Frederick, NCI-Frederick)
- Yi Gao (BWH/UAB)
- Yinglin Lee (SPL, BWH)
- Yingxuan Zhu (GE)
- Yixun Liu (CRTC)
- Yong Zhang (IBM)
- Yumin Yuan
- Yundi Shi
'
- Dicom Rt Import Export Plugin
)
- Dicom Rt Import Export Plugin
A
- Dicom Rt Import Export Plugin
a
- Dicom Rt Import Export Plugin
Akila Viswanathan
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
Alan Morris
- CMRToolkit Automatic Left Atrial Scar (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit LASegmentation Graph Cuts (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
- Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)
Alex Yarmakovich
- Models (loadable, built-in)
- Tractography Interactive Seeding (loadable, built-in)
Alex Yarmarkovich
- Data (loadable, built-in)
- Fiber Tract Measurements (cli, built-in)
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
- Image Label Combine (cli, built-in)
- Transforms (loadable, built-in)
- Volume Rendering (loadable, built-in)
- Volumes (loadable, built-in)
Ali Ghayoor
- BRAINSTransform Convert (cli, built-in)
- Perform Metric Test (cli, built-in)
Alireza Mehrtash
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
- TCIABrowser (scripted, bundled in TCIABrowser extension)
Allen Tannenbaum
- Carrera Slice Effect (scripted, bundled in Carrera Slice extension)
- Fast Grow Cut Effect (scripted, bundled in Fast Grow Cut Effect extension)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- Robust Statistics Segmenter (cli, built-in)
- Sobolev Segmenter (cli, bundled in Sobolev Segmenter extension)
Amelie Meyer
- Plus Remote (scripted, bundled in Slicer IGT extension)
Analysis Laboratory
- Apply Matrix (cli, bundled in CMFreg extension)
- Downsize (cli, bundled in CMFreg extension)
- Growing (cli, bundled in CMFreg extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Mask Creation (cli, bundled in CMFreg extension)
- Non Growing (cli, bundled in CMFreg extension)
Andras Lasso
- Breach Warning (loadable, bundled in Slicer IGT extension)
- Dose Accumulation (loadable, bundled in Slicer RT extension)
- Isodose (loadable, bundled in Slicer RT extension)
- Markups To Model (loadable, bundled in Slicer IGT extension)
- Matlab Commander (cli, bundled in Matlab Bridge extension)
- Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
- Metafile Importer (loadable, bundled in Sequences extension)
- Model Registration (scripted, bundled in Slicer IGT extension)
- Plus Remote (scripted, bundled in Slicer IGT extension)
- Py Dev Remote Debug (scripted, bundled in Py Dev Remote Debug extension)
- Sequence Browser (loadable, bundled in Sequences extension)
- Sequences (loadable, bundled in Sequences extension)
- Transforms (loadable, built-in)
- Volume Clip With Model (scripted, bundled in Volume Clip extension)
Andreas Freudling
- Volume Rendering (loadable, built-in)
Andrey Fedorov
- Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
- BSpline To Deformation Field (cli, built-in)
- Change Tracker (scripted, bundled in Change Tracker extension)
- Change Tracker Self Test
- Crop Volume (loadable, built-in)
- Crop Volume Self Test
- DICOMRWVMPlugin
- DICOMSegmentation Plugin
- Intensity Difference Metric (cli, bundled in Change Tracker extension)
- Label To DICOMSEGConverter (scripted, bundled in Reporting extension)
- Label To DICOMSEGConverter Self Test
- Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- Multi Volume Importer Plugin
- N4ITKBias Field Correction (cli, built-in)
- PBNRR (cli, bundled in PBNRR extension)
- Pk Modeling (cli, bundled in Pk Modeling extension)
- Quantitative Indices CLI (cli, bundled in PET-Indi C extension)
- Quantitative Indices Tool (scripted, bundled in PET-Indi C extension)
- Reporting (loadable, bundled in Reporting extension)
- Reporting Self Test
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
- TCIABrowser (scripted, bundled in TCIABrowser extension)
- Window Level Effect (scripted, bundled in Window Level Effect extension)
Andriy Kot
Anonymous
- CLIROITest (cli, built-in)
- EMSegment Transform To New Format (cli, built-in)
Antonio Damato
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
Antonio Tristan Vega
- DWIJoint Rician LMMSEFilter (cli, built-in)
- DWIRician LMMSEFilter (cli, built-in)
- DWIUnbiased Non Local Means Filter (cli, built-in)
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
Anuja Sharma
- dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
Arie Nakhmani
- Sobolev Segmenter (cli, bundled in Sobolev Segmenter extension)
Atsushi Yamada
- Corner Annotation (scripted, bundled in Corner Annotation extension)
- Path Explorer (loadable, bundled in Slicer IGT extension)
- Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
b
- Dicom Rt Import Export Plugin
Beatriz Paniagua from Department of Orthodontics
- Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
Benjamin Long
- Sample Data (scripted, built-in)
Benjamin Yvernault
- DTIAtlas Fiber Analyzer (cli, bundled in DTIAtlas Fiber Analyzer extension)
Bill Lorensen
- Add Scalar Volumes (cli, built-in)
- Checker Board Filter (cli, built-in)
- Create DICOMSeries (cli, built-in)
- Curvature Anisotropic Diffusion (cli, built-in)
- Diffusion Tensor Test (cli, built-in)
- Execution Model Tour (cli, built-in)
- Gradient Anisotropic Diffusion (cli, built-in)
- Grayscale Fill Hole Image Filter (cli, built-in)
- Grayscale Grind Peak Image Filter (cli, built-in)
- Grayscale Model Maker (cli, built-in)
- Histogram Matching (cli, built-in)
- Median Image Filter (cli, built-in)
- Model Maker (cli, built-in)
- Multiply Scalar Volumes (cli, built-in)
- Orient Scalar Volume (cli, built-in)
- Otsu Threshold Image Filter (cli, built-in)
- Resample Scalar Volume (cli, built-in)
- Spacing Aware Curvature Diffusion (cli, bundled in IASEM extension)
- Subtract Scalar Volumes (cli, built-in)
- Swiss Skull Stripper (cli, bundled in Swiss Skull Stripper extension)
- Voting Binary Hole Filling Image Filter (cli, built-in)
Brad Davis
- EMSegment Command Line (cli, built-in)
Bradley Lowekamp
- Bin Shrink (cli, bundled in IASEM extension)
- Double Threshold Effect (scripted, bundled in IASEM extension)
- IASEMImport (cli, bundled in IASEM extension)
- IASEMImport Series (cli, bundled in IASEM extension)
- Label Object Statistics (scripted, bundled in IASEM extension)
- Simple Filters (scripted, built-in)
- Spacing Aware Curvature Diffusion (cli, bundled in IASEM extension)
Brian Zenger
- CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
BWH
- DICOMSegmentation Plugin
- Multi Volume Importer Plugin
C
- Dicom Rt Import Export Plugin
Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
Casey B Goodlett
- Expert Automated Registration (cli, built-in)
- Fiducial Registration (cli, built-in)
Charles Marion
- Data Store (loadable, built-in)
Christian Bauer
- PETIndi C (scripted, bundled in PET-Indi C extension)
- PETTumor Segmentation (loadable, bundled in PETTumor Segmentation extension)
- PETTumor Segmentation Effect (scripted, bundled in PETTumor Segmentation extension)
- Quantitative Indices CLI (cli, bundled in PET-Indi C extension)
- Quantitative Indices Tool (scripted, bundled in PET-Indi C extension)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
Csaba Pinter
- Beams (loadable, bundled in Slicer RT extension)
- Data (loadable, built-in)
- DICOMScalar Volume Plugin
- Dose Accumulation (loadable, bundled in Slicer RT extension)
- Dvh Comparison (scripted, bundled in Slicer RT extension)
- Gel Dosimetry Analysis Algo (loadable, bundled in Gel Dosimetry Analysis extension)
- Isodose (loadable, bundled in Slicer RT extension)
- Planar Image (loadable, bundled in Slicer RT extension)
- Subject Hierarchy (loadable, built-in)
- Subject Hierarchy Core Plugins Self Test
- Subject Hierarchy Generic Self Test
- Vff File Reader (loadable, bundled in Slicer RT extension)
d
- Dicom Rt Import Export Plugin
Dan Marcus
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
Daniel Blezek
- Execution Model Tour (cli, built-in)
Daniel Haehn
- Annotations (loadable, built-in)
- Centerline Computation (scripted, bundled in VMTK extension)
- EMSegment (loadable, built-in)
- EMSegment Command Line (cli, built-in)
- Level Set Segmentation (scripted, bundled in VMTK extension)
- Merge Models (cli, built-in)
- Scene Views (loadable, built-in)
- Vesselness Filtering (scripted, bundled in VMTK extension)
Danny Perry
- CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
Demian Wassermann
- DICOM2Full Brain Tractography (scripted, built-in)
- Diffusion Weighted Volume Masking (cli, built-in)
- Fiber Bundle Label Select (cli, built-in)
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
- test tractography display
- Tractography Label Map Seeding (cli, built-in)
Dirk Padfield
- Label Map Smoothing (cli, built-in)
Dominik Meier
- Fiducial Registration (cli, built-in)
e
- Dicom Rt Import Export Plugin
Ethan Ulrich
- DICOMPETSUVPlugin
- DICOMRWVMPlugin
- PETIndi C (scripted, bundled in PET-Indi C extension)
- Quantitative Indices CLI (cli, bundled in PET-Indi C extension)
- Quantitative Indices Tool (scripted, bundled in PET-Indi C extension)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
Eugene Kholmovski
- CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
ez
- DWIJoint Rician LMMSEFilter (cli, built-in)
- DWIRician LMMSEFilter (cli, built-in)
- DWIUnbiased Non Local Means Filter (cli, built-in)
Fotis Drakopoulos
- Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
- Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
- PBNRR (cli, bundled in PBNRR extension)
Francois Budin
- Developer Tools For Extensions (scripted, bundled in Developer Tools For Extensions extension)
- DTIAtlas Fiber Analyzer (cli, bundled in DTIAtlas Fiber Analyzer extension)
- dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
- Mesh To Label Map (cli, bundled in Mesh To Label Map extension)
- Resample DTIVolume (cli, built-in)
- Resample Scalar Vector DWIVolume (cli, built-in)
Franklin King
- Collect Fiducials (loadable, bundled in Slicer IGT extension)
- Pivot Calibration (loadable, bundled in Slicer IGT extension)
- Plus Remote (scripted, bundled in Slicer IGT extension)
- Scoliosis Monitoring (scripted, bundled in Scoliosis extension)
- Spinal Curvature Measurement (scripted, bundled in Scoliosis extension)
- Transform Fusion (loadable, bundled in Slicer IGT extension)
- Transforms (loadable, built-in)
g
- Dicom Rt Import Export Plugin
Gopalkrishna Veni
- CMRToolkit LASegmentation Graph Cuts (cli, bundled in Cardiac MRI Toolkit extension)
Greg Gardner
- CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
Greg Harris
- BRAINSDemon Warp (cli, built-in)
- BRAINSResample (cli, built-in)
- VBRAINSDemon Warp (cli, built-in)
Gregory Sharp
- Dicom Sro Export (scripted, bundled in Slicer RT extension)
- Plm Register (scripted, bundled in Slicer RT extension)
Guido Gerig
- dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Extract Skeleton (cli, built-in)
Guillaume Pernelle
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
H
- Dicom Rt Import Export Plugin
Hans J. Johnson
- BRAINSDemon Warp (cli, built-in)
- BRAINSFit (cli, built-in)
- BRAINSROIAuto (cli, built-in)
- BRAINSTransform Convert (cli, built-in)
- VBRAINSDemon Warp (cli, built-in)
Hans Johnson
- BRAINSResample (cli, built-in)
- BRAINSResize (cli, built-in)
- Cardiac Agatston Measures (scripted, bundled in Cardiac Agaston Measures extension)
- DWIConvert (cli, built-in)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
hans-johnson -at- uiowa.edu
- BRAINSFit (cli, built-in)
- BRAINSROIAuto (cli, built-in)
http://www.psychiatry.uiowa.edu
- BRAINSFit (cli, built-in)
- BRAINSROIAuto (cli, built-in)
i
- Dicom Rt Import Export Plugin
Idk
- d Pet Brain Quantification (scripted, bundled in Pet Spect Analysis extension)
Ipek Oguz
- Mesh To Label Map (cli, bundled in Mesh To Label Map extension)
Ivan Kolesov
- Carrera Slice (loadable, bundled in Carrera Slice extension)
- Carrera Slice Effect (scripted, bundled in Carrera Slice extension)
- Fast Grow Cut Effect (scripted, bundled in Fast Grow Cut Effect extension)
Jaime Garcia Guevara
- Breach Warning (loadable, bundled in Slicer IGT extension)
- Markups To Model (loadable, bundled in Slicer IGT extension)
Jaime Garcia-Guevara
- Watchdog (loadable, bundled in Slicer IGT extension)
Jan Egger
Jayender Jagadeesan
- Heterogeneity CAD (scripted, bundled in Open CAD extension)
- Segment CAD (scripted, bundled in Open CAD extension)
- Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)
Jean-Baptiste Berger
- Data Store (loadable, built-in)
- DTIAtlas Fiber Analyzer (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Fiber Compare (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Merge Stat With Fiber (cli, bundled in DTIAtlas Fiber Analyzer extension)
Jean-Christophe Fillion-Robin
- CLI4Test
- Data Store (loadable, built-in)
- Fast Grow Cut (loadable, bundled in Fast Grow Cut Effect extension)
- Fast Grow Cut Segmenter (loadable, bundled in Carrera Slice extension)
- fiber visibility crash2438
- label Toggle Bug2049
- Matlab Commander (cli, bundled in Matlab Bridge extension)
- Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- Sample Data (scripted, built-in)
- Simple Filters (scripted, built-in)
- Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
- Transforms (loadable, built-in)
- View Controllers (loadable, built-in)
- Welcome (loadable, built-in)
Jennifer Andrea
- Vff File Reader (loadable, bundled in Slicer RT extension)
Jessica Forbes
- Cardiac Agatston Measures (scripted, bundled in Cardiac Agaston Measures extension)
Jim Miller
- Charting (scripted, built-in)
- Pk Modeling (cli, bundled in Pk Modeling extension)
- Simple Region Growing Segmentation (cli, built-in)
- Slice Link Logic (scripted, built-in)
- Slicer4Minute (scripted, built-in)
- View Controllers (loadable, built-in)
- View Controllers Slice Interpolation Bug1926
Johan Andruejol
- Units (loadable, built-in)
John Buatti
- PETIndi C (scripted, bundled in PET-Indi C extension)
- Quantitative Indices CLI (cli, bundled in PET-Indi C extension)
- Quantitative Indices Tool (scripted, bundled in PET-Indi C extension)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
John Evans
- Pk Modeling (cli, bundled in Pk Modeling extension)
Jonathan Bronson
- Cleaver CLI (cli, bundled in Cleaver Extension extension)
Josh Cates
- CMRToolkit Automatic Left Atrial Scar (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit LASegmentation Graph Cuts (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
- Label Map Smoothing (cli, built-in)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
- Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)
Joy Matsui
- DWIConvert (cli, built-in)
Julien Finet
- Cameras (loadable, built-in)
- Colors (loadable, built-in)
- Data (loadable, built-in)
- Double Arrays (loadable, built-in)
- Event Broker
- Image Maker (cli, bundled in Image Maker extension)
- Models (loadable, built-in)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- Scene Performance (scripted, built-in)
- Threshold Scalar Volume (cli, built-in)
- Tractography Display (loadable, built-in)
- Transforms (loadable, built-in)
- Units (loadable, built-in)
- Volume Rendering (loadable, built-in)
- Volumes (loadable, built-in)
Julien Jomier
- Gaussian Blur Image Filter (cli, built-in)
Junichi Tokuda
- Corner Annotation (scripted, bundled in Corner Annotation extension)
- Curve Maker (scripted, bundled in Curve Maker extension)
- Light Weight Robot IGT (loadable, bundled in Light Weight Robot IGT extension)
- Path Explorer (loadable, bundled in Slicer IGT extension)
- Volume Reslice Driver (loadable, bundled in Slicer IGT extension)
K
- Dicom Rt Import Export Plugin
Kent Williams
- BRAINSDWICleanup (cli, built-in)
- BRAINSTransform Convert (cli, built-in)
- DWIConvert (cli, built-in)
Kent WIlliams
- BRAINSStrip Rotation (cli, built-in)
Kevin Wang
- Colors Scalar Bar Self Test
- Dicom Sro Export (scripted, bundled in Slicer RT extension)
- Dicom Sro Import (loadable, bundled in Slicer RT extension)
- Dicom Sro Import Plugin
- Dose Accumulation (loadable, bundled in Slicer RT extension)
- Isodose (loadable, bundled in Slicer RT extension)
- Matlab Commander (cli, bundled in Matlab Bridge extension)
- Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
- Sequence Browser (loadable, bundled in Sequences extension)
- Sequences (loadable, bundled in Sequences extension)
Kilian Pohl
- Annotations (loadable, built-in)
- Change Tracker (scripted, bundled in Change Tracker extension)
- EMSegment (loadable, built-in)
- EMSegment Command Line (cli, built-in)
- Scene Views (loadable, built-in)
Koichiro Murakami
- Corner Annotation (scripted, bundled in Corner Annotation extension)
Kyle Sunderl
- Dvh Comparison (scripted, bundled in Slicer RT extension)
L
- Dicom Rt Import Export Plugin
Lauren Barber
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
Lauren O'Donnell
- Fiber Bundle Label Select (cli, built-in)
- Probe Volume With Model (cli, built-in)
Laurent Chauvin
- Curve Maker (scripted, bundled in Curve Maker extension)
- Dice Computation (loadable, bundled in Dice Computation extension)
- Path Explorer (loadable, bundled in Slicer IGT extension)
- Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)
Liangjia Zhu
- Carrera Slice Effect (scripted, bundled in Carrera Slice extension)
- Fast Grow Cut Effect (scripted, bundled in Fast Grow Cut Effect extension)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
Luca Antiga
- Centerline Computation (scripted, bundled in VMTK extension)
- Level Set Segmentation (scripted, bundled in VMTK extension)
- Surface Toolbox (scripted, built-in)
- Vesselness Filtering (scripted, bundled in VMTK extension)
Luping Fang
- Gyro Guide (scripted, bundled in Gyro Guide extension)
Marc Niethammer
- DWIRician LMMSEFilter (cli, built-in)
Mark Scully
- DWIConvert (cli, built-in)
Markus Van Tol
- Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
Markus van Tol
- PETIndi C (scripted, bundled in PET-Indi C extension)
- PETTumor Segmentation (loadable, bundled in PETTumor Segmentation extension)
- PETTumor Segmentation Effect (scripted, bundled in PETTumor Segmentation extension)
- Quantitative Indices CLI (cli, bundled in PET-Indi C extension)
- Quantitative Indices Tool (scripted, bundled in PET-Indi C extension)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
Martin Styner
- dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Extract Skeleton (cli, built-in)
Mason Winsauer
- Apply Matrix (cli, bundled in CMFreg extension)
- Downsize (cli, bundled in CMFreg extension)
- Growing (cli, bundled in CMFreg extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Mask Creation (cli, bundled in CMFreg extension)
- Non Growing (cli, bundled in CMFreg extension)
Matt Lougheed
- Volume Clip With Model (scripted, bundled in Volume Clip extension)
Matthew Holden
- Breach Warning (loadable, bundled in Slicer IGT extension)
- Fiducial Registration Wizard (loadable, bundled in Slicer IGT extension)
- Metafile Importer (loadable, bundled in Sequences extension)
- Python Metrics Calculator (scripted, bundled in Perk Tutor extension)
- Sequence Browser (loadable, bundled in Sequences extension)
- Sequences (loadable, bundled in Sequences extension)
Matthew S. Holden
- Perk Evaluator (loadable, bundled in Perk Tutor extension)
- Transform Recorder (loadable, bundled in Perk Tutor extension)
- Workflow Segmentation (loadable, bundled in Perk Tutor extension)
Matthew Woehlke
- Extension Wizard (scripted, built-in)
Michael Jeulin-Lagarrigue
- Reformat (loadable, built-in)
n
- Dicom Rt Import Export Plugin
N
- Dicom Rt Import Export Plugin
Nabgha Fahrat
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
Neuro Image Resarch
- Apply Matrix (cli, bundled in CMFreg extension)
- Downsize (cli, bundled in CMFreg extension)
- Growing (cli, bundled in CMFreg extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Mask Creation (cli, bundled in CMFreg extension)
- Non Growing (cli, bundled in CMFreg extension)
Nicholas Herlambang
- JRC2013Vis
Nick Tustison
- N4ITKBias Field Correction (cli, built-in)
Nicole Aucoin
- ACPCTransform (cli, built-in)
- Add Many Markups Fiducial Test
- Annotations (loadable, built-in)
- Cast Scalar Volume (cli, built-in)
- Colors (loadable, built-in)
- Colors Scalar Bar Self Test
- Data (loadable, built-in)
- Fiducial Layout Switch Bug1914
- Grayscale Model Maker (cli, built-in)
- Markups (loadable, built-in)
- Markups In Compare Viewers Self Test
- Markups In Views Self Test
- Mask Scalar Volume (cli, built-in)
- Merge Models (cli, built-in)
- Model Maker (cli, built-in)
- Models (loadable, built-in)
- Model To Label Map (cli, built-in)
- Neurosurgical Planning Tutorial Markups Self Test
- PETStandard Uptake Value Computation (cli, built-in)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- Reporting (loadable, bundled in Reporting extension)
- Scene Views (loadable, built-in)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
- Threshold Scalar Volume (cli, built-in)
- Volume Rendering Scene Close (scripted, built-in)
- Volumes (loadable, built-in)
Nigel Goh
- Thingiverse Browser (scripted, bundled in Thingiverse Browser extension)
Nikos Chrisochoides
- Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
- Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
- PBNRR (cli, bundled in PBNRR extension)
o
- Dicom Rt Import Export Plugin
Olivier Clatz
P
- Dicom Rt Import Export Plugin
Paolo Zaffino
- Plastimatch Py (loadable, bundled in Slicer RT extension)
Pat Marion
- Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
Patricio Vela
- Carrera Slice Effect (scripted, bundled in Carrera Slice extension)
Paul Mercea
- Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)
Pengdong Xiao
- Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
Peter Black
- Change Tracker (scripted, bundled in Change Tracker extension)
Peter Karasev
- Carrera Slice (loadable, bundled in Carrera Slice extension)
- Carrera Slice Effect (scripted, bundled in Carrera Slice extension)
Peter Savadjiev
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
Pierre Seroul
- Extract Skeleton (cli, built-in)
Pietro Nardelli
- Airway Segmentation (scripted, bundled in Airway Segmentation extension)
- Airway Segmentation CLI (cli, bundled in Airway Segmentation extension)
Please direct questions or suggestions to http://groups.google.com/group/plastimatch
- plastimatch slicer bspline (cli, bundled in Slicer RT extension)
- plastimatch slicer landwarp (cli, bundled in Slicer RT extension)
Polina Goll
- EMSegment Command Line (cli, built-in)
Q
- Dicom Rt Import Export Plugin
Qing Pan
- Gyro Guide (scripted, bundled in Gyro Guide extension)
r
- Dicom Rt Import Export Plugin
Raul San Jose
- Diffusion Tensor Scalar Measurements (cli, built-in)
- DWITo DTIEstimation (cli, built-in)
- Tractography Label Map Seeding (cli, built-in)
Reinhard Beichel
- Quantitative Indices CLI (cli, bundled in PET-Indi C extension)
- Quantitative Indices Tool (scripted, bundled in PET-Indi C extension)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
Reinhard R. Beichel
- PETIndi C (scripted, bundled in PET-Indi C extension)
Rob MacLeod
- CMRToolkit Automatic Left Atrial Scar (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit LASegmentation Graph Cuts (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
- Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)
Ron Kikinis
- ACPCTransform (cli, built-in)
- Cast Scalar Volume (cli, built-in)
- Change Tracker (scripted, bundled in Change Tracker extension)
- Crop Volume (loadable, built-in)
- Fast Grow Cut Effect (scripted, bundled in Fast Grow Cut Effect extension)
- Mask Scalar Volume (cli, built-in)
- Merge Models (cli, built-in)
- Model Maker (cli, built-in)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- N4ITKBias Field Correction (cli, built-in)
- PETStandard Uptake Value Computation (cli, built-in)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- Robust Statistics Segmenter (cli, built-in)
- Surface Toolbox (scripted, built-in)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
- Threshold Scalar Volume (cli, built-in)
- View Controllers (loadable, built-in)
- Volume Rendering (loadable, built-in)
Ross Whitaker
- CMRToolkit LASegmentation Graph Cuts (cli, bundled in Cardiac MRI Toolkit extension)
- Label Map Smoothing (cli, built-in)
Ruifeng Chen
- Gyro Guide (scripted, bundled in Gyro Guide extension)
S
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
s
- Dicom Rt Import Export Plugin
Salma Bengali
- CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit LASegmentation Graph Cuts (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
- LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
- Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)
Sam Song
Santiago Aja Fern
- DWIJoint Rician LMMSEFilter (cli, built-in)
- DWIRician LMMSEFilter (cli, built-in)
- DWIUnbiased Non Local Means Filter (cli, built-in)
Sebastian Tauscher
- Light Weight Robot IGT (loadable, bundled in Light Weight Robot IGT extension)
Sebastien Barré
- Cameras (loadable, built-in)
Sebastien Barre
- EMSegment Command Line (cli, built-in)
Shigeyuki Naka
- Corner Annotation (scripted, bundled in Corner Annotation extension)
Soichiro Tani
- Corner Annotation (scripted, bundled in Corner Annotation extension)
Sonia Pujol
- Dice Computation (loadable, bundled in Dice Computation extension)
- DTIexport (cli, built-in)
- DTIimport (cli, built-in)
Stephen Aylward
- Extract Skeleton (cli, built-in)
- Gaussian Blur Image Filter (cli, built-in)
Stephen R Aylward
- Expert Automated Registration (cli, built-in)
Steve Pieper
- Atlas Tests
- Binary Watershed Effect (scripted, bundled in IASEM extension)
- Carrera Slice Effect (scripted, bundled in Carrera Slice extension)
- Centerline Computation (scripted, bundled in VMTK extension)
- Compare Volumes (scripted, bundled in CMFreg extension)
- Data Probe (scripted, built-in)
- DICOM (scripted, built-in)
- DICOMDiffusion Volume Plugin
- DICOMLongitudinal PETCTPlugin
- DICOMScalar Volume Plugin
- DICOMSlicer Data Bundle Plugin
- Editor (scripted, built-in)
- Endoscopy (scripted, built-in)
- fiber visibility crash2438
- Fiber Bundle To Label Map (scripted, built-in)
- Label Statistics (scripted, built-in)
- label Toggle Bug2049
- Landmark Registration (scripted, bundled in CMFreg extension)
- Level Set Segmentation (scripted, bundled in VMTK extension)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- Performance Tests
- PETTumor Segmentation Effect (scripted, bundled in PETTumor Segmentation extension)
- Reporting (loadable, bundled in Reporting extension)
- RSNA2012Prostate Demo
- RSNAQuant Tutorial
- RSNAVis Tutorial
- Sample Data (scripted, built-in)
- scene Import2428
- Self Tests
- Simple Filters (scripted, built-in)
- slicer Close Crash Bug2590
- Slicer MRBTest
- Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
- Threshold Threading Test
- Vector To Scalar Volume (scripted, built-in)
- Vesselness Filtering (scripted, bundled in VMTK extension)
- View Controllers (loadable, built-in)
- Volumes (loadable, built-in)
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
Sunil Kumar
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
Sylvain Gouttard
- dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
T
- Dicom Rt Import Export Plugin
t
- Dicom Rt Import Export Plugin
Tamas Ungi
- Breach Warning (loadable, bundled in Slicer IGT extension)
- Breach Warning Self Test
- Collect Fiducials (loadable, bundled in Slicer IGT extension)
- Create Models (loadable, bundled in Slicer IGT extension)
- Fiducial Registration Wizard (loadable, bundled in Slicer IGT extension)
- Fiducials To Model Registration (scripted, bundled in Slicer IGT extension)
- Model Registration (scripted, bundled in Slicer IGT extension)
- Open IGTLink Remote (loadable, bundled in Slicer IGT extension)
- Perk Evaluator (loadable, bundled in Perk Tutor extension)
- Pivot Calibration (loadable, bundled in Slicer IGT extension)
- Plus Remote (scripted, bundled in Slicer IGT extension)
- Python Metrics Calculator (scripted, bundled in Perk Tutor extension)
- Scoliosis Monitoring (scripted, bundled in Scoliosis extension)
- Spinal Curvature Measurement (scripted, bundled in Scoliosis extension)
- Transform Fusion (loadable, bundled in Slicer IGT extension)
- Transform Recorder (loadable, bundled in Perk Tutor extension)
- Ultrasound Snapshots (loadable, bundled in Slicer IGT extension)
- Volume Reslice Driver (loadable, bundled in Slicer IGT extension)
- Watchdog (loadable, bundled in Slicer IGT extension)
- Watchdog Self Test
- Workflow Segmentation (loadable, bundled in Perk Tutor extension)
the University of North Carolina at Chapel Hill
- Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
Thomas Lawson
Tina Kapur
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
Tobias Penzkofer
Tohru Tani
- Corner Annotation (scripted, bundled in Corner Annotation extension)
u
- Dicom Rt Import Export Plugin
U
- Dicom Rt Import Export Plugin
UNC Medical School
- Apply Matrix (cli, bundled in CMFreg extension)
- Downsize (cli, bundled in CMFreg extension)
- Growing (cli, bundled in CMFreg extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Mask Creation (cli, bundled in CMFreg extension)
- Non Growing (cli, bundled in CMFreg extension)
UofM School Of Dentistry
UofM School of Dentistry
- Apply Matrix (cli, bundled in CMFreg extension)
- Downsize (cli, bundled in CMFreg extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Mask Creation (cli, bundled in CMFreg extension)
- Non Growing (cli, bundled in CMFreg extension)
v
- Dicom Rt Import Export Plugin
Vince Magnotta
- DWIConvert (cli, built-in)
Vincent A. Magnotta
- BRAINSLabel Stats (cli, built-in)
Vincent Magnotta
- BRAINSResample (cli, built-in)
Vinicius Boen
- Apply Matrix (cli, bundled in CMFreg extension)
- Downsize (cli, bundled in CMFreg extension)
- Growing (cli, bundled in CMFreg extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Mask Creation (cli, bundled in CMFreg extension)
- Non Growing (cli, bundled in CMFreg extension)
- Surface Registration (scripted, bundled in CMFreg extension)
Vivek Narayan
- Heterogeneity CAD (scripted, bundled in Open CAD extension)
- Segment CAD (scripted, bundled in Open CAD extension)
W
- Dicom Rt Import Export Plugin
Wendy Plesniak
- Annotations (loadable, built-in)
- PETStandard Uptake Value Computation (cli, built-in)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- Scene Views (loadable, built-in)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
- View Controllers (loadable, built-in)
- Welcome (loadable, built-in)
Xiaodong Tao
- DWIConvert (cli, built-in)
- Model To Label Map (cli, built-in)
- Skull Stripper (cli, bundled in Skull Stripper extension)
Xiaojun Chen
y Wells
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
Yanling Liu
- Volume Rendering (loadable, built-in)
Yi Gao
- Carrera Slice Effect (scripted, bundled in Carrera Slice extension)
- Fast Grow Cut Effect (scripted, bundled in Fast Grow Cut Effect extension)
- i Gyne (scripted, bundled in i Gyne extension)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
- Robust Statistics Segmenter (cli, built-in)
Yinglin Lee
- Test Grid Transform Registration (cli, built-in)
Yingxuan Zhu
- Pk Modeling (cli, bundled in Pk Modeling extension)
Yixun Liu
- Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
- Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
- PBNRR (cli, bundled in PBNRR extension)
Yong Zhang
- Annotations (loadable, built-in)
Yumin Yuan
- EMSegment Command Line (cli, built-in)
Yundi Shi
- dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
Modules by type
3 types:
cli
- ACPCTransform (cli, built-in)
- Add Scalar Volumes (cli, built-in)
- Airway Segmentation CLI (cli, bundled in Airway Segmentation extension)
- Apply Matrix (cli, bundled in CMFreg extension)
- Bin Shrink (cli, bundled in IASEM extension)
- Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
- BRAINSDemon Warp (cli, built-in)
- BRAINSDWICleanup (cli, built-in)
- BRAINSFit (cli, built-in)
- BRAINSLabel Stats (cli, built-in)
- BRAINSResample (cli, built-in)
- BRAINSResize (cli, built-in)
- BRAINSROIAuto (cli, built-in)
- BRAINSStrip Rotation (cli, built-in)
- BRAINSTransform Convert (cli, built-in)
- BSpline To Deformation Field (cli, built-in)
- Cast Scalar Volume (cli, built-in)
- Checker Board Filter (cli, built-in)
- Cleaver CLI (cli, bundled in Cleaver Extension extension)
- CLIROITest (cli, built-in)
- CMRToolkit Automatic Left Atrial Scar (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit LASegmentation Graph Cuts (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
- Create DICOMSeries (cli, built-in)
- Curvature Anisotropic Diffusion (cli, built-in)
- Diffusion Tensor Scalar Measurements (cli, built-in)
- Diffusion Tensor Test (cli, built-in)
- Diffusion Weighted Volume Masking (cli, built-in)
- Downsize (cli, bundled in CMFreg extension)
- DTIAtlas Fiber Analyzer (cli, bundled in DTIAtlas Fiber Analyzer extension)
- DTIexport (cli, built-in)
- DTIimport (cli, built-in)
- dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
- DWIConvert (cli, built-in)
- DWIJoint Rician LMMSEFilter (cli, built-in)
- DWIRician LMMSEFilter (cli, built-in)
- DWITo DTIEstimation (cli, built-in)
- DWIUnbiased Non Local Means Filter (cli, built-in)
- EMSegment Command Line (cli, built-in)
- EMSegment Transform To New Format (cli, built-in)
- Execution Model Tour (cli, built-in)
- Expert Automated Registration (cli, built-in)
- Extract Skeleton (cli, built-in)
- Fiber Bundle Label Select (cli, built-in)
- Fiber Compare (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Fiber Tract Measurements (cli, built-in)
- Fiducial Registration (cli, built-in)
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
- Gaussian Blur Image Filter (cli, built-in)
- Gradient Anisotropic Diffusion (cli, built-in)
- Grayscale Fill Hole Image Filter (cli, built-in)
- Grayscale Grind Peak Image Filter (cli, built-in)
- Grayscale Model Maker (cli, built-in)
- Growing (cli, bundled in CMFreg extension)
- Histogram Matching (cli, built-in)
- IASEMImport (cli, bundled in IASEM extension)
- IASEMImport Series (cli, bundled in IASEM extension)
- Image Label Combine (cli, built-in)
- Image Maker (cli, bundled in Image Maker extension)
- Intensity Difference Metric (cli, bundled in Change Tracker extension)
- Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Label Map Smoothing (cli, built-in)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- Mask Creation (cli, bundled in CMFreg extension)
- Mask Scalar Volume (cli, built-in)
- Matlab Commander (cli, bundled in Matlab Bridge extension)
- Median Image Filter (cli, built-in)
- Merge Models (cli, built-in)
- Merge Stat With Fiber (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
- Mesh To Label Map (cli, bundled in Mesh To Label Map extension)
- Model Maker (cli, built-in)
- Model To Label Map (cli, built-in)
- Multiply Scalar Volumes (cli, built-in)
- N4ITKBias Field Correction (cli, built-in)
- Non Growing (cli, bundled in CMFreg extension)
- Orient Scalar Volume (cli, built-in)
- Otsu Threshold Image Filter (cli, built-in)
- PBNRR (cli, bundled in PBNRR extension)
- Perform Metric Test (cli, built-in)
- PETStandard Uptake Value Computation (cli, built-in)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- Pk Modeling (cli, bundled in Pk Modeling extension)
- plastimatch slicer bspline (cli, bundled in Slicer RT extension)
- plastimatch slicer landwarp (cli, bundled in Slicer RT extension)
- Probe Volume With Model (cli, built-in)
- Quantitative Indices CLI (cli, bundled in PET-Indi C extension)
- Resample DTIVolume (cli, built-in)
- Resample Scalar Vector DWIVolume (cli, built-in)
- Resample Scalar Volume (cli, built-in)
- Robust Statistics Segmenter (cli, built-in)
- Simple Region Growing Segmentation (cli, built-in)
- Skull Stripper (cli, bundled in Skull Stripper extension)
- Sobolev Segmenter (cli, bundled in Sobolev Segmenter extension)
- Spacing Aware Curvature Diffusion (cli, bundled in IASEM extension)
- Subtract Scalar Volumes (cli, built-in)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
- Swiss Skull Stripper (cli, bundled in Swiss Skull Stripper extension)
- Test Grid Transform Registration (cli, built-in)
- Threshold Scalar Volume (cli, built-in)
- Tractography Label Map Seeding (cli, built-in)
- VBRAINSDemon Warp (cli, built-in)
- Voting Binary Hole Filling Image Filter (cli, built-in)
loadable
- Annotations (loadable, built-in)
- Beams (loadable, bundled in Slicer RT extension)
- Breach Warning (loadable, bundled in Slicer IGT extension)
- Cameras (loadable, built-in)
- Carrera Slice (loadable, bundled in Carrera Slice extension)
- Collect Fiducials (loadable, bundled in Slicer IGT extension)
- Colors (loadable, built-in)
- Create Models (loadable, bundled in Slicer IGT extension)
- Crop Volume (loadable, built-in)
- Data (loadable, built-in)
- Data Store (loadable, built-in)
- Dice Computation (loadable, bundled in Dice Computation extension)
- Dicom Sro Import (loadable, bundled in Slicer RT extension)
- Dose Accumulation (loadable, bundled in Slicer RT extension)
- Double Arrays (loadable, built-in)
- EMSegment (loadable, built-in)
- EMSegment Quick (loadable, built-in)
- Fast Grow Cut (loadable, bundled in Fast Grow Cut Effect extension)
- Fast Grow Cut Segmenter (loadable, bundled in Carrera Slice extension)
- Fiducial Registration Wizard (loadable, bundled in Slicer IGT extension)
- Gel Dosimetry Analysis Algo (loadable, bundled in Gel Dosimetry Analysis extension)
- Isodose (loadable, bundled in Slicer RT extension)
- Light Weight Robot IGT (loadable, bundled in Light Weight Robot IGT extension)
- Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)
- Markups (loadable, built-in)
- Markups To Model (loadable, bundled in Slicer IGT extension)
- Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
- Metafile Importer (loadable, bundled in Sequences extension)
- Models (loadable, built-in)
- Multi Volume Explorer (loadable, built-in)
- Open IGTLink IF (loadable, built-in)
- Open IGTLink Remote (loadable, bundled in Slicer IGT extension)
- Path Explorer (loadable, bundled in Slicer IGT extension)
- Perk Evaluator (loadable, bundled in Perk Tutor extension)
- PETTumor Segmentation (loadable, bundled in PETTumor Segmentation extension)
- Pivot Calibration (loadable, bundled in Slicer IGT extension)
- Planar Image (loadable, bundled in Slicer RT extension)
- Plastimatch Py (loadable, bundled in Slicer RT extension)
- Reformat (loadable, built-in)
- Reporting (loadable, bundled in Reporting extension)
- Scene Views (loadable, built-in)
- Sequence Browser (loadable, bundled in Sequences extension)
- Sequences (loadable, bundled in Sequences extension)
- Subject Hierarchy (loadable, built-in)
- Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)
- Tractography Display (loadable, built-in)
- Tractography Interactive Seeding (loadable, built-in)
- Transform Fusion (loadable, bundled in Slicer IGT extension)
- Transform Recorder (loadable, bundled in Perk Tutor extension)
- Transforms (loadable, built-in)
- Ultrasound Snapshots (loadable, bundled in Slicer IGT extension)
- Units (loadable, built-in)
- Vff File Reader (loadable, bundled in Slicer RT extension)
- View Controllers (loadable, built-in)
- Volume Rendering (loadable, built-in)
- Volume Reslice Driver (loadable, bundled in Slicer IGT extension)
- Volumes (loadable, built-in)
- Watchdog (loadable, bundled in Slicer IGT extension)
- Welcome (loadable, built-in)
- Workflow Segmentation (loadable, bundled in Perk Tutor extension)
scripted
- Airway Segmentation (scripted, bundled in Airway Segmentation extension)
- Binary Watershed Effect (scripted, bundled in IASEM extension)
- Cardiac Agatston Measures (scripted, bundled in Cardiac Agaston Measures extension)
- Carrera Slice Effect (scripted, bundled in Carrera Slice extension)
- Centerline Computation (scripted, bundled in VMTK extension)
- Change Tracker (scripted, bundled in Change Tracker extension)
- Charting (scripted, built-in)
- CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
- Compare Volumes (scripted, bundled in CMFreg extension)
- Corner Annotation (scripted, bundled in Corner Annotation extension)
- Curve Maker (scripted, bundled in Curve Maker extension)
- Data Probe (scripted, built-in)
- Developer Tools For Extensions (scripted, bundled in Developer Tools For Extensions extension)
- DICOM (scripted, built-in)
- DICOM2Full Brain Tractography (scripted, built-in)
- Dicom Sro Export (scripted, bundled in Slicer RT extension)
- Double Threshold Effect (scripted, bundled in IASEM extension)
- d Pet Brain Quantification (scripted, bundled in Pet Spect Analysis extension)
- Dvh Comparison (scripted, bundled in Slicer RT extension)
- Editor (scripted, built-in)
- Endoscopy (scripted, built-in)
- Extension Wizard (scripted, built-in)
- Fast Grow Cut Effect (scripted, bundled in Fast Grow Cut Effect extension)
- Fiber Bundle To Label Map (scripted, built-in)
- Fiducials To Model Registration (scripted, bundled in Slicer IGT extension)
- Gyro Guide (scripted, bundled in Gyro Guide extension)
- Heterogeneity CAD (scripted, bundled in Open CAD extension)
- i Gyne (scripted, bundled in i Gyne extension)
- KUtil (scripted, bundled in Carrera Slice extension)
- Label Object Statistics (scripted, bundled in IASEM extension)
- Label Statistics (scripted, built-in)
- Label To DICOMSEGConverter (scripted, bundled in Reporting extension)
- Landmark Registration (scripted, bundled in CMFreg extension)
- LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
- Level Set Segmentation (scripted, bundled in VMTK extension)
- Model Registration (scripted, bundled in Slicer IGT extension)
- Multi Volume Importer (scripted, built-in)
- Needle Finder (scripted, bundled in Needle Finder extension)
- PETIndi C (scripted, bundled in PET-Indi C extension)
- PETTumor Segmentation Effect (scripted, bundled in PETTumor Segmentation extension)
- Plm Register (scripted, bundled in Slicer RT extension)
- Plus Remote (scripted, bundled in Slicer IGT extension)
- Py Dev Remote Debug (scripted, bundled in Py Dev Remote Debug extension)
- Python Metrics Calculator (scripted, bundled in Perk Tutor extension)
- Quantitative Indices Tool (scripted, bundled in PET-Indi C extension)
- Sample Data (scripted, built-in)
- Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)
- Scene Performance (scripted, built-in)
- Scoliosis Monitoring (scripted, bundled in Scoliosis extension)
- Segment CAD (scripted, bundled in Open CAD extension)
- Simple Filters (scripted, built-in)
- Slice Link Logic (scripted, built-in)
- Slicer4Minute (scripted, built-in)
- Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
- Spinal Curvature Measurement (scripted, bundled in Scoliosis extension)
- Surface Registration (scripted, bundled in CMFreg extension)
- Surface Toolbox (scripted, built-in)
- TCIABrowser (scripted, bundled in TCIABrowser extension)
- Thingiverse Browser (scripted, bundled in Thingiverse Browser extension)
- Vector To Scalar Volume (scripted, built-in)
- Vesselness Filtering (scripted, bundled in VMTK extension)
- Volume Clip With Model (scripted, bundled in Volume Clip extension)
- Volume Rendering Scene Close (scripted, built-in)
- Wasp (scripted, bundled in Wasp extension)
- Window Level Effect (scripted, bundled in Window Level Effect extension)
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
Modules by extension
57 extensions:
- builtin
- Cardiac MRI Toolkit
- Cardiac Agaston Measures
- Carrera Slice
- CBC 3D I2MConversion
- Change Tracker
- Cleaver Extension
- CMFreg
- Corner Annotation
- Curve Maker
- Developer Tools For Extensions
- Dice Computation
- DTIAtlas Fiber Analyzer
- Fast Grow Cut Effect
- Finsler Tractography
- Gel Dosimetry Analysis
- Gyro Guide
- IASEM
- i Gyne
- Image Maker
- Intensity Segmenter
- LAScar Segmenter
- Light Weight Robot IGT
- Longitudinal PETCT
- Matlab Bridge
- Mesh To Label Map
- Needle Finder
- Open CAD
- PBNRR
- Perk Tutor
- PET-Indi C
- PETDICOMExtension
- Pet Spect Analysis
- PETTumor Segmentation
- Pk Modeling
- Py Dev Remote Debug
- Reporting
- Scoliosis
- Sequences
- Skull Stripper
- Airway Segmentation
- Wasp
- VMTK
- Slicer IGT
- Slicer RT
- Slicer To Kiwi Exporter
- Sobolev Segmenter
- Swiss Skull Stripper
- TCIABrowser
- Thingiverse Browser
- Tracker Stabilizer
- Volume Clip
- Window Level Effect
- XNATSlicer
builtin
- ACPCTransform (cli, built-in)
- Add Scalar Volumes (cli, built-in)
- Annotations (loadable, built-in)
- BRAINSDemon Warp (cli, built-in)
- BRAINSDWICleanup (cli, built-in)
- BRAINSFit (cli, built-in)
- BRAINSLabel Stats (cli, built-in)
- BRAINSResample (cli, built-in)
- BRAINSResize (cli, built-in)
- BRAINSROIAuto (cli, built-in)
- BRAINSStrip Rotation (cli, built-in)
- BRAINSTransform Convert (cli, built-in)
- BSpline To Deformation Field (cli, built-in)
- Cameras (loadable, built-in)
- Cast Scalar Volume (cli, built-in)
- Charting (scripted, built-in)
- Checker Board Filter (cli, built-in)
- CLIROITest (cli, built-in)
- Colors (loadable, built-in)
- Create DICOMSeries (cli, built-in)
- Crop Volume (loadable, built-in)
- Curvature Anisotropic Diffusion (cli, built-in)
- Data (loadable, built-in)
- Data Probe (scripted, built-in)
- Data Store (loadable, built-in)
- DICOM (scripted, built-in)
- DICOM2Full Brain Tractography (scripted, built-in)
- Diffusion Tensor Scalar Measurements (cli, built-in)
- Diffusion Tensor Test (cli, built-in)
- Diffusion Weighted Volume Masking (cli, built-in)
- Double Arrays (loadable, built-in)
- DTIexport (cli, built-in)
- DTIimport (cli, built-in)
- DWIConvert (cli, built-in)
- DWIJoint Rician LMMSEFilter (cli, built-in)
- DWIRician LMMSEFilter (cli, built-in)
- DWITo DTIEstimation (cli, built-in)
- DWIUnbiased Non Local Means Filter (cli, built-in)
- Editor (scripted, built-in)
- EMSegment (loadable, built-in)
- EMSegment Command Line (cli, built-in)
- EMSegment Quick (loadable, built-in)
- EMSegment Transform To New Format (cli, built-in)
- Endoscopy (scripted, built-in)
- Execution Model Tour (cli, built-in)
- Expert Automated Registration (cli, built-in)
- Extension Wizard (scripted, built-in)
- Extract Skeleton (cli, built-in)
- Fiber Bundle Label Select (cli, built-in)
- Fiber Bundle To Label Map (scripted, built-in)
- Fiber Tract Measurements (cli, built-in)
- Fiducial Registration (cli, built-in)
- Gaussian Blur Image Filter (cli, built-in)
- Gradient Anisotropic Diffusion (cli, built-in)
- Grayscale Fill Hole Image Filter (cli, built-in)
- Grayscale Grind Peak Image Filter (cli, built-in)
- Grayscale Model Maker (cli, built-in)
- Histogram Matching (cli, built-in)
- Image Label Combine (cli, built-in)
- Label Map Smoothing (cli, built-in)
- Label Statistics (scripted, built-in)
- Markups (loadable, built-in)
- Mask Scalar Volume (cli, built-in)
- Median Image Filter (cli, built-in)
- Merge Models (cli, built-in)
- Model Maker (cli, built-in)
- Models (loadable, built-in)
- Model To Label Map (cli, built-in)
- Multiply Scalar Volumes (cli, built-in)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- N4ITKBias Field Correction (cli, built-in)
- Open IGTLink IF (loadable, built-in)
- Orient Scalar Volume (cli, built-in)
- Otsu Threshold Image Filter (cli, built-in)
- Perform Metric Test (cli, built-in)
- PETStandard Uptake Value Computation (cli, built-in)
- Probe Volume With Model (cli, built-in)
- Reformat (loadable, built-in)
- Resample DTIVolume (cli, built-in)
- Resample Scalar Vector DWIVolume (cli, built-in)
- Resample Scalar Volume (cli, built-in)
- Robust Statistics Segmenter (cli, built-in)
- Sample Data (scripted, built-in)
- Scene Performance (scripted, built-in)
- Scene Views (loadable, built-in)
- Simple Filters (scripted, built-in)
- Simple Region Growing Segmentation (cli, built-in)
- Slice Link Logic (scripted, built-in)
- Slicer4Minute (scripted, built-in)
- Subject Hierarchy (loadable, built-in)
- Subtract Scalar Volumes (cli, built-in)
- Surface Toolbox (scripted, built-in)
- Test Grid Transform Registration (cli, built-in)
- Threshold Scalar Volume (cli, built-in)
- Tractography Display (loadable, built-in)
- Tractography Interactive Seeding (loadable, built-in)
- Tractography Label Map Seeding (cli, built-in)
- Transforms (loadable, built-in)
- Units (loadable, built-in)
- VBRAINSDemon Warp (cli, built-in)
- Vector To Scalar Volume (scripted, built-in)
- View Controllers (loadable, built-in)
- Volume Rendering (loadable, built-in)
- Volume Rendering Scene Close (scripted, built-in)
- Volumes (loadable, built-in)
- Voting Binary Hole Filling Image Filter (cli, built-in)
- Welcome (loadable, built-in)
Cardiac_MRI_Toolkit
- CMRToolkit Automatic Left Atrial Scar (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit LASegmentation Graph Cuts (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
- LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
- Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)
CardiacAgastonMeasures
- Cardiac Agatston Measures (scripted, bundled in Cardiac Agaston Measures extension)
CarreraSlice
- Carrera Slice (loadable, bundled in Carrera Slice extension)
- Carrera Slice Effect (scripted, bundled in Carrera Slice extension)
- Fast Grow Cut Segmenter (loadable, bundled in Carrera Slice extension)
- KUtil (scripted, bundled in Carrera Slice extension)
CBC_3D_I2MConversion
- Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
- Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
ChangeTracker
- Change Tracker (scripted, bundled in Change Tracker extension)
- Intensity Difference Metric (cli, bundled in Change Tracker extension)
CleaverExtension
- Cleaver CLI (cli, bundled in Cleaver Extension extension)
CMFreg
- Apply Matrix (cli, bundled in CMFreg extension)
- Compare Volumes (scripted, bundled in CMFreg extension)
- Downsize (cli, bundled in CMFreg extension)
- Growing (cli, bundled in CMFreg extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Landmark Registration (scripted, bundled in CMFreg extension)
- Mask Creation (cli, bundled in CMFreg extension)
- Non Growing (cli, bundled in CMFreg extension)
- Surface Registration (scripted, bundled in CMFreg extension)
CornerAnnotation
- Corner Annotation (scripted, bundled in Corner Annotation extension)
CurveMaker
- Curve Maker (scripted, bundled in Curve Maker extension)
DeveloperToolsForExtensions
- Developer Tools For Extensions (scripted, bundled in Developer Tools For Extensions extension)
DiceComputation
- Dice Computation (loadable, bundled in Dice Computation extension)
DTIAtlasFiberAnalyzer
- DTIAtlas Fiber Analyzer (cli, bundled in DTIAtlas Fiber Analyzer extension)
- dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Fiber Compare (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Merge Stat With Fiber (cli, bundled in DTIAtlas Fiber Analyzer extension)
FastGrowCutEffect
- Fast Grow Cut (loadable, bundled in Fast Grow Cut Effect extension)
- Fast Grow Cut Effect (scripted, bundled in Fast Grow Cut Effect extension)
FinslerTractography
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
GelDosimetryAnalysis
- Gel Dosimetry Analysis Algo (loadable, bundled in Gel Dosimetry Analysis extension)
GyroGuide
- Gyro Guide (scripted, bundled in Gyro Guide extension)
IASEM
- Binary Watershed Effect (scripted, bundled in IASEM extension)
- Bin Shrink (cli, bundled in IASEM extension)
- Double Threshold Effect (scripted, bundled in IASEM extension)
- IASEMImport (cli, bundled in IASEM extension)
- IASEMImport Series (cli, bundled in IASEM extension)
- Label Object Statistics (scripted, bundled in IASEM extension)
- Spacing Aware Curvature Diffusion (cli, bundled in IASEM extension)
iGyne
ImageMaker
- Image Maker (cli, bundled in Image Maker extension)
IntensitySegmenter
- Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
LAScarSegmenter
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
LightWeightRobotIGT
- Light Weight Robot IGT (loadable, bundled in Light Weight Robot IGT extension)
LongitudinalPETCT
- Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
MatlabBridge
- Matlab Commander (cli, bundled in Matlab Bridge extension)
- Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
MeshToLabelMap
- Mesh To Label Map (cli, bundled in Mesh To Label Map extension)
NeedleFinder
- Needle Finder (scripted, bundled in Needle Finder extension)
OpenCAD
- Heterogeneity CAD (scripted, bundled in Open CAD extension)
- Segment CAD (scripted, bundled in Open CAD extension)
PBNRR
PerkTutor
- Perk Evaluator (loadable, bundled in Perk Tutor extension)
- Python Metrics Calculator (scripted, bundled in Perk Tutor extension)
- Transform Recorder (loadable, bundled in Perk Tutor extension)
- Workflow Segmentation (loadable, bundled in Perk Tutor extension)
PET-IndiC
- PETIndi C (scripted, bundled in PET-Indi C extension)
- Quantitative Indices CLI (cli, bundled in PET-Indi C extension)
- Quantitative Indices Tool (scripted, bundled in PET-Indi C extension)
PETDICOMExtension
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
PetSpectAnalysis
- d Pet Brain Quantification (scripted, bundled in Pet Spect Analysis extension)
PETTumorSegmentation
- PETTumor Segmentation (loadable, bundled in PETTumor Segmentation extension)
- PETTumor Segmentation Effect (scripted, bundled in PETTumor Segmentation extension)
PkModeling
- Pk Modeling (cli, bundled in Pk Modeling extension)
PyDevRemoteDebug
- Py Dev Remote Debug (scripted, bundled in Py Dev Remote Debug extension)
Reporting
- Label To DICOMSEGConverter (scripted, bundled in Reporting extension)
- Reporting (loadable, bundled in Reporting extension)
Scoliosis
- Scoliosis Monitoring (scripted, bundled in Scoliosis extension)
- Spinal Curvature Measurement (scripted, bundled in Scoliosis extension)
Sequences
- Metafile Importer (loadable, bundled in Sequences extension)
- Sequence Browser (loadable, bundled in Sequences extension)
- Sequences (loadable, bundled in Sequences extension)
SkullStripper
- Skull Stripper (cli, bundled in Skull Stripper extension)
Slicer-AirwaySegmentation
- Airway Segmentation (scripted, bundled in Airway Segmentation extension)
- Airway Segmentation CLI (cli, bundled in Airway Segmentation extension)
Slicer-Wasp
SlicerExtension-VMTK
- Centerline Computation (scripted, bundled in VMTK extension)
- Level Set Segmentation (scripted, bundled in VMTK extension)
- Vesselness Filtering (scripted, bundled in VMTK extension)
SlicerIGT
- Breach Warning (loadable, bundled in Slicer IGT extension)
- Collect Fiducials (loadable, bundled in Slicer IGT extension)
- Create Models (loadable, bundled in Slicer IGT extension)
- Fiducial Registration Wizard (loadable, bundled in Slicer IGT extension)
- Fiducials To Model Registration (scripted, bundled in Slicer IGT extension)
- Markups To Model (loadable, bundled in Slicer IGT extension)
- Model Registration (scripted, bundled in Slicer IGT extension)
- Open IGTLink Remote (loadable, bundled in Slicer IGT extension)
- Path Explorer (loadable, bundled in Slicer IGT extension)
- Pivot Calibration (loadable, bundled in Slicer IGT extension)
- Plus Remote (scripted, bundled in Slicer IGT extension)
- Transform Fusion (loadable, bundled in Slicer IGT extension)
- Ultrasound Snapshots (loadable, bundled in Slicer IGT extension)
- Volume Reslice Driver (loadable, bundled in Slicer IGT extension)
- Watchdog (loadable, bundled in Slicer IGT extension)
SlicerRT
- Beams (loadable, bundled in Slicer RT extension)
- Dicom Sro Export (scripted, bundled in Slicer RT extension)
- Dicom Sro Import (loadable, bundled in Slicer RT extension)
- Dose Accumulation (loadable, bundled in Slicer RT extension)
- Dvh Comparison (scripted, bundled in Slicer RT extension)
- Isodose (loadable, bundled in Slicer RT extension)
- Planar Image (loadable, bundled in Slicer RT extension)
- plastimatch slicer bspline (cli, bundled in Slicer RT extension)
- plastimatch slicer landwarp (cli, bundled in Slicer RT extension)
- Plastimatch Py (loadable, bundled in Slicer RT extension)
- Plm Register (scripted, bundled in Slicer RT extension)
- Vff File Reader (loadable, bundled in Slicer RT extension)
SlicerToKiwiExporter
- Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
SobolevSegmenter
- Sobolev Segmenter (cli, bundled in Sobolev Segmenter extension)
SwissSkullStripper
- Swiss Skull Stripper (cli, bundled in Swiss Skull Stripper extension)
TCIABrowser
- TCIABrowser (scripted, bundled in TCIABrowser extension)
ThingiverseBrowser
- Thingiverse Browser (scripted, bundled in Thingiverse Browser extension)
TrackerStabilizer
- Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)
VolumeClip
- Volume Clip With Model (scripted, bundled in Volume Clip extension)
WindowLevelEffect
- Window Level Effect (scripted, bundled in Window Level Effect extension)
XNATSlicer
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
Extensions by category
25 categories:
- Cardiac
- Cardiac MRI toolkit
- Converters
- Developer Tools
- Diffusion
- Editor Effects
- Exporter
- IGT
- Informatics
- Mesh Generation
- Microscopy
- Nuclear Medicine
- Quantification
- Radiotherapy
- Registration
- Remote
- Scoliosis
- Segmentation
- Sequences
- Shape Analysis
- Tractography
- Training
- Utilities
- Vascular Modeling Toolkit
- Wizards
Cardiac
Cardiac MRI toolkit
Converters
Developer Tools
Diffusion
Editor Effects
Exporter
IGT
- Port Placement
- Light Weight Robot IGT
- Gyro Guide
- Corner Annotation
- Slicer IGT
- Percutaneous Approach Analysis
- Needle Finder
- Tracker Stabilizer
- i Gyne
- Resection Planner
Informatics
Mesh Generation
Microscopy
Nuclear Medicine
Quantification
Radiotherapy
Registration
Remote
Scoliosis
Segmentation
- Open CAD
- Carrera Slice
- Skull Stripper
- PETTumor Segmentation
- Swiss Skull Stripper
- LAScar Segmenter
- Intensity Segmenter
- Wasp
- Airway Segmentation
- Sobolev Segmenter
- Fast Grow Cut Effect
- Volume Clip
Sequences
Shape Analysis
Tractography
Training
Utilities
Vascular Modeling Toolkit
Wizards
Extensions by name
56 extensions:
- Cardiac MRI Toolkit
- Cardiac Agaston Measures
- Carrera Slice
- CBC 3D I2MConversion
- Change Tracker
- Cleaver Extension
- CMFreg
- Corner Annotation
- Curve Maker
- Developer Tools For Extensions
- Dice Computation
- DTIAtlas Fiber Analyzer
- Fast Grow Cut Effect
- Finsler Tractography
- Gel Dosimetry Analysis
- Gyro Guide
- IASEM
- i Gyne
- Image Maker
- Intensity Segmenter
- LAScar Segmenter
- Light Weight Robot IGT
- Longitudinal PETCT
- Matlab Bridge
- Mesh To Label Map
- Needle Finder
- Open CAD
- PBNRR
- Percutaneous Approach Analysis
- Perk Tutor
- PET-Indi C
- PETDICOMExtension
- Pet Spect Analysis
- PETTumor Segmentation
- Pk Modeling
- Port Placement
- Py Dev Remote Debug
- Reporting
- Resection Planner
- Scoliosis
- Sequences
- Skull Stripper
- Airway Segmentation
- Wasp
- VMTK
- Slicer IGT
- Slicer RT
- Slicer To Kiwi Exporter
- Sobolev Segmenter
- Swiss Skull Stripper
- TCIABrowser
- Thingiverse Browser
- Tracker Stabilizer
- Volume Clip
- Window Level Effect
- XNATSlicer
Extensions by contributing organization
59 contributing organizations:
- Asclepios INRIA) and Nikos Chrisochoides (CRTC
- Boston Childrens Hospital
- Brigham and Women's Hospital
- BWH
- BWH & MGH
- BWH, SPL
- CARMA
- College of Information Engineering, Zhejiang University of Technology, Hangzhou, China
- Crisalix
- CRTC
- Department of Neurosurgery, PLA General Hospital, Beijing, China
- Department of Orthodontics, UNC
- Facultad de Ingenieria, Uruguay
- GE
- GT
- Isomics
- Kitware
- LUH
- Massachusetts General Hospital
- Moka Creative LLC, Washington University in St. Louis
- MRC Harwell, Oxfordshire
- NIRAL, UNC
- Noware
- Orobix
- Perk Lab at Queen's University
- Perk Lab, Queen's
- Perk Lab, Queen's University
- PMH
- Queen's University
- Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto
- SBU
- SCI Institute
- Shiga University of Medical Science
- Shiga University of Medical Science, Japan
- Shiga University of Medical Science, Japan, SPL
- SNR
- SPL
- SPL and BWH
- SPL B&W Harvard
- SRI
- Stony Brook University
- Surgical Planning Lab
- UAB
- UIowa
- UNC
- Univ of Michigan
- University College Cork
- University of Bern
- University of Heidelberg
- University of Iowa
- Utah
- UWA
- Washington University in St. Louis
Asclepios INRIA) and Nikos Chrisochoides (CRTC
Boston Childrens Hospital
Brigham and Women's Hospital
BWH
- Change Tracker
- Curve Maker
- Dice Computation
- Fast Grow Cut Effect
- Light Weight Robot IGT
- Open CAD
- Pk Modeling
- Sequences
- Tracker Stabilizer
BWH & MGH
BWH, SPL
CARMA
College of Information Engineering, Zhejiang University of Technology, Hangzhou, China
Crisalix
CRTC
Department of Neurosurgery, PLA General Hospital, Beijing, China
Department of Orthodontics, UNC
Facultad de Ingenieria, Uruguay
GE
GT
Isomics
Kitware
LUH
Massachusetts General Hospital
Moka Creative LLC, Washington University in St. Louis
MRC Harwell, Oxfordshire
NIRAL, UNC
Noware
Orobix
PerkLab at Queen's University
PerkLab, Queen's
PerkLab, Queen's University
PMH
Queen's University
Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto
SBU
SCI Institute
Shiga University of Medical Science
Shiga University of Medical Science, Japan
Shiga University of Medical Science, Japan, SPL
SNR
SPL
- Change Tracker
- Percutaneous Approach Analysis
- PET-Indi C
- PETTumor Segmentation
- Reporting
- Window Level Effect
SPL and BWH
SPL B&W Harvard
SRI
Stony Brook University
Surgical Planning Lab
UAB
UIowa
UNC
Univ of Michigan
University College Cork
University of Bern
University of Heidelberg
University of Iowa
Utah
UWA
Washington University in St. Louis
Extensions by contributing individual
141 contributing individuals:
- Akila Viswanathan
- Alan Morris (Utah)
- Alex Yarmarkovich (Kitware))
- Alireza Mehrtash (SPL and BWH)
- Allen Tannenbaum (Stony Brook University)
- Alvaro Gomez (Facultad de Ingenieria, Uruguay)
- Amelie Meyer (PerkLab, Queen's University)
- Andinet Enquobahrie (Kitware)
- Andras Lasso (PerkLab, Queen's Universit)
- Andre Mastmeyer
- Andrey Fedorov (SPL B&W Harvard)
- Andriy Fedorov (BWH)
- Andriy Kot (CRTC)
- Antonio Damato
- Antonio Tristan-Vega (Isomics)
- Arie Nakhmani (UAB)
- Arnaud Gelas (Crisalix)
- Atsushi Yamada (Shiga University of Medical Science)
- Beatriz Paniagua (UNC)
- Bill Lorensen (Noware)
- Bradley Lowekamp (MSC/NLM)
- Brig Bagley (SCI Institute)
- Carl-Fredrik Westin
- Christian Bauer (Univ. of Iowa)
- Csaba Pinter (PerkLab, Queen's University)
- Dan Marcus (Washington University in St. Louis)
- Daniel Haehn (UPenn)
- Danny Perry (Utah)
- Demian Wasssermann
- Ethan Ulrich (Univ. of Iowa)
- Eugene Kholmovski (CARMA)
- Fotis Drakopoulos (CRTC)
- Francois Budin (NIRAL, UNC)
- Franklin King (PerkLab, Queen's University)
- Greg Gardner (Utah)
- Greg Sharp (Massachusetts General Hospital)
- Guillaume Pernelle
- Guillermo Carbajal (Facultad de Ingenieria, Uruguay)
- Hans Johnson (SINAPSE)
- Isaiah Norton (BWH)
- Ivan Kolesov (Stony Brook University)
- Jaime Garcia-Guevara (Queen's University)
- Jan Egger
- Jayender Jagadeesan (BWH)
- Jean-Christophe Fillion-Robin (Kitware)
- Jennifer Andrea (PerkLab, Queen's University)
- Jessica Forbes (SINAPSE)
- Jiashu Zhang (Department of Neurosurgery, PLA General Hospital, Beijing, China)
- Jim Miller (GE)
- John Buatti (Univ. of Iowa)
- Jonathan Bronson (SCI Institute)
- Josh Cates (Utah)
- Julien Finet (Kitware)
- Junichi Tokuda (BWH)
- Karl Fritscher (BWH & MGH)
- Kevin Wang (Princess Margaret Cancer Centre)
- Kilian Pohl (UPenn)
- Koichiro Murakami (SUMS)
- Lauren Barber
- Laurent Chauvin (BWH)
- Liangjia Zhu (Stony Brook University)
- Luca Antiga (Orobix)
- Luis G. Torres (UNC)
- Luping Fang (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
- Mahnaz Maddah (SRI)
- Manson Winsauer (UNC)
- Markus van Tol (Univ. of Iowa)
- Martin Bertran (Facultad de Ingenieria, Uruguay)
- Matt Lougheed (PerkLab, Queen's University)
- Mattea Welch (PerkLab, Queen's University)
- Matthew Holden (Queen's University)
- Matthew S. Holden (Queen's University)
- Mauricio Reyes (University of Bern)
- Ming-ching Chang (GE)
- Nabgha Fahrat
- Natalia Martinez Gil (Facultad de Ingenieria, Uruguay)
- Nicole Aucoin (BWH)
- Nigel Goh (UWA)
- Nikos Chrisochoides (CRTC)
- Olivier Clatz (Asclepios INRIA) and Nikos Chrisochoides (CRTC)
- Pat Marion (Kitware)
- Patricio Vela (Georgia Institute of Technology)
- Paul Mercea (University of Heidelberg)
- Pengdong Xiao (Department of Orthodontics, UNC)
- Peter Black (BWH)
- Peter Karasev (Georgia Tech)
- Peter Savadjiev (Kitware))
- Pietro Nardelli (University College Cork)
- Qing Pan (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
- Reinhard Beichel (University of Iowa)
- Reinhard R. Beichel (Univ. of Iowa)
- Rick Herrick (Washington University in St. Louis)
- Rob Mac Leod (Utah)
- Ron Kikinis (BWH)
- Ruifeng Chen (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
- S
- Salma Bengali (CARMA)
- Sam Song
- Sebastian Tauscher (LUH)
- Stefan Bauer (University of Bern)
- Steve Pieper (Isomics Inc.)
- Sunil Kumar (Moka Creative, LLC, kumar.sunil.p@gmail.com)
- Tamas Ungi (Queen's Universit)
- Thomas Fejes (University of Bern)
- Thomas Lawson (MRC Harwell, Oxfordshire)
- Tina Kapur
- Tobias Penzkofer
- Vinicius Boen (Univ of Michigan)
- Vivek Narayan (BWH)
- Xiaodong Tao (GE)
- Xiaojun Chen
- Xiaolei Chen (Department of Neurosurgery, PLA General Hospital, Beijing, China)
- y Wells
- Yi Gao (BWH/UAB)
- Yingxuan Zhu (GE)
- Yixun Liu (CRTC)
Akila Viswanathan
Alan Morris
Alex Yarmarkovich
Alireza Mehrtash
Allen Tannenbaum
Alvaro Gomez
Amelie Meyer
Andinet Enquobahrie
Andras Lasso
Andre Mastmeyer
Andrey Fedorov
- CBC 3D I2MConversion
- Change Tracker
- Longitudinal PETCT
- PBNRR
- PET-Indi C
- PETDICOMExtension
- PETTumor Segmentation
- Reporting
- TCIABrowser
- Window Level Effect
