User:UpdateBot/Issue-2843-Consolidated-Extension-List

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Revision as of 08:48, 4 December 2014 by UpdateBot (talk | contribs) (This page has been updated based on the list of extension description files available on the ExtensionsIndex)
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Modules by name

Modules by category

Categories:

BRAINS

LabelStatistics

  • BRAINSLabel Stats

CMF Registration

Voxelbase Registration

Converters

Developer Tools

DICOM Plugins

  • DICOMRWVMPlugin
  • DICOMLongitudinal PETCTPlugin
  • Multi Volume Importer Plugin
  • DICOMPETSUVPlugin
  • DICOMDiffusion Volume Plugin
  • DICOMSegmentation Plugin
  • DICOMScalar Volume Plugin
  • DICOMSlicer Data Bundle Plugin

Editor Extensions

  • Binary Watershed Effect
  • Fast Grow Cut Effect
  • Carrera Slice Effect
  • Double Threshold Effect

Matlab

Diffusion

Diffusion Data Conversion

  • DWIConvert

Diffusion Tensor Images

Diffusion Weighted Images

Tractography

Editor Effects

  • Window Level Effect

Endoscopy

Examples

Exporter

Filtering

Arithmetic

Denoising

Morphology

IGT

Informatics

Legacy

Converters

Diffusion

Denoising

Diffusion Data Conversion

  • DTIimport
  • DTIexport

Filtering

Registration

Work in Progress

Diffusion Tensor

Test
  • Diffusion Tensor Test

Mesh Generation

  • Cleaver CLI

MeshGeneration

Microscopy

  • Bin Shrink
  • Label Object Statistics
  • Spacing Aware Curvature Diffusion
  • IASEMImport Series
  • IASEMImport

Multidimensional data

  • Metafile Importer
  • Sequence Browser
  • Sequences

MultiVolume Support

Perk Tutor

Quantification

ChangeQuantification

Registration

Specialized

Segmentation

Specialized

Slicelets

  • Gel Dosimetry Analysis Algo

Surface Models

Testing

  • Self Tests
  • CLIROITest
  • CLI4Test
  • Threshold Threading Test
  • Scoliosis Monitoring
  • Performance Tests
  • Slicer MRBTest

TestCases

  • Slice Link Logic
  • Atlas Tests
  • RSNAQuant Tutorial
  • Volume Rendering Scene Close
  • test tractography display
  • Subject Hierarchy Core Plugins Self Test
  • slicer Close Crash Bug2590
  • Subject Hierarchy Generic Self Test
  • Charting
  • Scene Performance
  • Markups In Compare Viewers Self Test
  • fiber visibility crash2438
  • scene Import2428
  • RSNAVis Tutorial
  • JRC2013Vis
  • RSNA2012Prostate Demo
  • Add Many Markups Fiducial Test
  • Neurosurgical Planning Tutorial Markups Self Test
  • Colors Scalar Bar Self Test
  • Markups In Views Self Test
  • Change Tracker Self Test
  • Fiducial Layout Switch Bug1914
  • View Controllers Slice Interpolation Bug1926
  • Slicer4Minute
  • label Toggle Bug2049

Unspecified

  • BRAINSDWICleanup

Utilities

BRAINS

  • BRAINSTransform Convert

Wizards

Work in Progress

  • Longitudinal PETCT

Converters

  • Label To DICOMSEGConverter

Informatics

  • Reporting

TestCases

  • Reporting Self Test
  • Label To DICOMSEGConverter Self Test

XNATSlicer

  • Xnat Slicer

Modules by contributing organization

Contributing organizations:

Asclepios INRIA

  • PBNRR

AZE R&D

  • JRC2013Vis

Brigham and Women's Hospital

BWH

  • Add Many Markups Fiducial Test
  • Change Tracker Self Test
  • Colors Scalar Bar Self Test
  • Curve Maker
  • Dice Computation
  • DICOMRWVMPlugin
  • Fast Grow Cut Effect
  • Fiducial Layout Switch Bug1914
  • Markups
  • Markups In Compare Viewers Self Test
  • Markups In Views Self Test
  • Neurosurgical Planning Tutorial Markups Self Test
  • Segmentation Aided Registration
  • Volume Rendering Scene Close
  • Window Level Effect

BWH, SPL

BWH, SUMS

BWH/UAB

College of Information Engineering, Zhejiang University of Technology, Hangzhou, China); Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China

CRTC

gatech

GE

Georgia Institute of Technology

  • Carrera Slice Effect

Georgia Tech

  • Carrera Slice

IBM

Isomics

Isomics Inc.

  • DICOMDiffusion Volume Plugin
  • DICOMLongitudinal PETCTPlugin
  • DICOMScalar Volume Plugin
  • DICOMSlicer Data Bundle Plugin
  • Slicer MRBTest
  • Threshold Threading Test

Isomics, Inc.

  • Carrera Slice Effect

Isomics, pieper@isomics.com

  • Xnat Slicer

Kitware

Kitware)

MGH

Moka Creative, LLC, kumar.sunil.p@gmail.com

  • Xnat Slicer

MSC/NLM

Noware

Orobix

PerkLab at Queen's University

  • Py Dev Remote Debug

PerkLab, Queen's

  • Metafile Importer
  • Sequence Browser
  • Sequences
  • Transforms

PerkLab, Queen's University

PMH

  • Colors Scalar Bar Self Test
  • Sequence Browser
  • Sequences

Queen's

  • Data
  • Gel Dosimetry Analysis Algo
  • Subject Hierarchy
  • Subject Hierarchy Core Plugins Self Test
  • Subject Hierarchy Generic Self Test

Queen's University

Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto

SAIC-Frederick, NCI-Frederick

SBU

SCI Institute

  • Cleaver CLI

Shiga University of Medical Science, Japan, SPL

  • Percutaneous Approach Analysis

SNR

SPL

  • DICOM2Full Brain Tractography
  • Label To DICOMSEGConverter Self Test
  • Percutaneous Approach Analysis
  • Pk Modeling
  • Reporting Self Test
  • Tracker Stabilizer

SPL B&W Harvard

  • PBNRR

SPL, BWH

SPL, BWH, UPenn

Stony Brook University

  • Carrera Slice Effect
  • Fast Grow Cut Effect

SUMS

Surgical Planning Lab

  • Label To DICOMSEGConverter

UAB

Uiowa

  • DWIConvert

UIowa

  • DWIConvert

UNC

Univ of Michigan

  • Surface Registration

Univ. of Iowa

University College Cork

  • Airway Segmentation CLI

University of Alabama Birmingham

  • Carrera Slice Effect
  • Fast Grow Cut Effect

University of Heidelberg

  • Longitudinal PETCT

University of Iowa

University of Iowa) and Andrey Fedorov (SPL

  • Longitudinal PETCT

UPenn

Utah

UVa

UWA

WashU-St. Louis, dmarcus@wustl.edu

  • Xnat Slicer

while at GE

Modules by contributing individual

Contributing individuals:

Alex Yarmarkovich

Ali Ghayoor

  • BRAINSTransform Convert

Allen Tannenbaum

  • Carrera Slice Effect
  • Fast Grow Cut Effect

and Hans Johnson.

Beatriz Paniagua from Department of Orthodontics

  • Intensity Segmenter

Brad Davis

  • EMSegment Command Line

BWH

  • DICOMSegmentation Plugin
  • Multi Volume Importer Plugin

Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez

Daniel Haehn

  • EMSegment Command Line

Demian Wassermann

Dinggang Shen

  • IGR3D MABMIS Testing
  • IGR3D MABMIS Training

Francois Budin

  • Intensity Segmenter

Greg Harris

hans-johnson -at- uiowa.edu

http://www.psychiatry.uiowa.edu

Ivan Kolesov

  • Fast Grow Cut Effect

Kilian Pohl

  • EMSegment
  • EMSegment Command Line

Lauren O'Donnell

  • Fiber Bundle Label Select

Liangjia Zhu

  • Carrera Slice Effect

Luping Fang

Matt Lougheed

  • Volume Clip With Model

Neuro Image Resarch and Analysis Laboratory

Patricio Vela

  • Carrera Slice Effect

Peter Karasev

  • Carrera Slice

Peter Savadjiev

Polina Golland

  • EMSegment Command Line

Qing Pan

the University of North Carolina at Chapel Hill

  • Intensity Segmenter

UNC Medical School

UofM School of Dentistry

UofM School Of Dentistry

Xiaofeng Liu

  • IGR3D MABMIS Testing
  • IGR3D MABMIS Training

Yumin Yuan

  • EMSegment Command Line

Akila Viswanathan

  • i Gyne
  • Needle Finder

Alan Morris

Alex Yarmakovich

  • Models
  • Tractography Interactive Seeding

Alex Yarmarkovich

Ali Ghayoor

  • Perform Metric Test

Alireza Mehrtash

  • i Gyne
  • Needle Finder
  • TCIABrowser

Allen Tannenbaum

and Ron Kikinis

  • Fast Grow Cut Effect

and Steve Pieper

  • Carrera Slice Effect

Andinet Enquobahrie

Andras Lasso

Andreas Freudling

Andrey Fedorov

Andriy Kot

  • PBNRR

Anonymous

  • CLIROITest
  • EMSegment Transform To New Format

Antonio Damato

  • i Gyne
  • Needle Finder

Antonio Tristan Vega

Arie Nakhmani

Atsushi Yamada

Benjamin Long

Bill Lorensen

Bradley Lowekamp

  • Bin Shrink
  • Double Threshold Effect
  • IASEMImport
  • IASEMImport Series
  • Label Object Statistics
  • Simple Filters

Bradley Lowekamp and Bill Lorensen

  • Spacing Aware Curvature Diffusion

Casey B Goodlett

Charles Marion

Csaba Pinter

  • Data
  • Gel Dosimetry Analysis Algo
  • Subject Hierarchy
  • Subject Hierarchy Core Plugins Self Test
  • Subject Hierarchy Generic Self Test

Dan Marcus

  • Xnat Slicer

Daniel Blezek

Daniel Haehn

Danny Perry

Demian Wassermann

Dirk Padfield

Dominik Meier

Ethan Ulrich

Fotis Drakopoulos

Francois Budin

Franklin King

Greg Gardner

Guido Gerig

Guillaume Pernelle

  • i Gyne
  • Needle Finder

Hans J. Johnson

  • BRAINSFit
  • BRAINSROIAuto
  • BRAINSTransform Convert

Hans Johnson

Ivan Kolesov

  • Carrera Slice
  • Carrera Slice Effect

Jan Egger

  • i Gyne

Jayender Jagadeesan

Jean-Baptiste Berger

Jean-Christophe Fillion-Robin

Jim Miller

Johan Andruejol

  • Units

John Evans

Jonathan Bronson

  • Cleaver CLI

Josh Cates

Joy Matsui

  • DWIConvert

Julien Finet

Julien Jomier

Junichi Tokuda

  • Corner Annotation
  • Curve Maker
  • Dilate Label
  • Erode Label
  • Percutaneous Approach Analysis

Kent Williams

  • BRAINSTransform Convert
  • DWIConvert

Kevin Wang

Kilian Pohl

Koichiro Murakami

Lauren Barber

  • i Gyne
  • Needle Finder

Lauren O'Donnell

Laurent Chauvin

Liang-Jia Zhu

Liangjia Zhu

Luca Antiga

Luis G. Torres

Marc Niethammer

Marcel Prastawa prastawa@sci.utah.edu

  • ABC

Mark Scully

  • DWIConvert

Markus Van Tol

Martin Styner

Matthew Holden

  • Metafile Importer
  • Python Metrics Calculator
  • Sequence Browser
  • Sequences

Matthew S. Holden

Matthew Woehlke

Michael Jeulin-Lagarrigue

Minjeong Kim

  • IGR3D MABMIS Testing
  • IGR3D MABMIS Training

Nabgha Fahrat

  • i Gyne
  • Needle Finder

Nicholas Herlambang

  • JRC2013Vis

Nick Tustison

Nicole Aucoin

Nigel Goh

Nikos Chrisochoides

Olivier Clatz

  • PBNRR

Pat Marion

Paul Mercea

  • Longitudinal PETCT

Pengdong Xiao

  • Intensity Segmenter

Peter Black

Peter Karasev

  • Carrera Slice Effect

Pierre Seroul

Pietro Nardelli

  • Airway Segmentation CLI

Raul San Jose

Rob MacLeod

Ron Kikinis

Ross Whitaker

Ruifeng Chen

Sam Song

  • i Gyne

Sandy Wells

  • i Gyne
  • Needle Finder

Santiago Aja Fernandez

Sebastien Barré

Sebastien Barre

  • EMSegment Command Line

Shigeyuki Naka

Soichiro Tani

Sonia Pujol

Stephen Aylward

Stephen R Aylward

Steve Pieper

Sunil Kumar

  • Xnat Slicer

Sylvain Bouix

Tamas Ungi

This tool was developed by Hans J. Johnson and Greg Harris.

This tool was developed by Hans Johnson.

  • BRAINSResize

This tool was developed by Kent Williams.

  • BRAINSDWICleanup

This tool was developed by Vincent Magnotta

Tina Kapur

  • i Gyne
  • Needle Finder

Tobias Penzkofer

  • i Gyne

Tohru Tani

Vince Magnotta

  • DWIConvert

Vincent A. Magnotta

  • BRAINSLabel Stats

Vinicius Boen

  • Surface Registration

Vinicius Boen and Mason Winsauer

Wendy Plesniak

Xiaodong Tao

Xiaojun Chen

  • i Gyne

Yanling Liu

Yi Gao

Yinglin Lee

  • Test Grid Transform Registration

Yingxuan Zhu

Yixun Liu

Yong Zhang

Extensions by name

Extensions by category

Categories:

Cardiac

Cardiac MRI toolkit

Converters

Developer Tools

Diffusion

Editor Effects

Exporter

Filtering

Morphology

IGT

Informatics

Mesh Generation

Microscopy

Multidimensional data

Quantification

Radiotherapy

Registration

Remote

Scoliosis

Segmentation

Shape Analysis

Surface Models

Tractography

Training

Utilities

Vascular Modeling Toolkit

Wizards

Extensions by contributing organization

Contributing organizations:

Asclepios INRIA) and Nikos Chrisochoides (CRTC

Boston Childrens Hospital

Brigham and Women's Hospital

BWH

BWH & MGH

BWH, SPL

BWH/UAB

CARMA

College of Information Engineering, Zhejiang University of Technology, Hangzhou, China

Crisalix

CRTC

Department of Neurosurgery, PLA General Hospital, Beijing, China

Department of Orthodontics, UNC

GE

GE GLobal Research

GT

Isomics

Kitware

LUH

Massachusetts General Hospital

Moka Creative LLC, Washington University in St. Louis

NIRAL, UNC

Noware

Orobix

PerkLab at Queen's University

PerkLab, Queen's

PerkLab, Queen's University

PMH

Queen's University

Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto

SBU

SCI Institute

Shiga University of Medical Science, Japan

Shiga University of Medical Science, Japan, SPL

SPL

SPL and BWH

SPL B&W Harvard

SRI

Stony Brook University

Surgical Planning Lab

UAB

UIowa

UNC

Univ of Michigan

University College Cork

University of Bern

University of Heidelberg

University of Iowa

University of Utah

Utah

UWA

Washington University in St. Louis

yogesh@bwh.harvard.edu

Extensions by contributing individual

Contributing individuals:

Alireza Mehrtash

Allen Tannenbaum

Akila Viswanathan

Alex Yarmarkovich

Alireza Mehrtash

Allen Tannenbaum

Andre Mastmeyer

Antonio Damato

Carl-Fredrik Westin

Carl-Fredrik Westin.

Christian Baumgartner

Hans Johnson

Ipek Oguz

Ivan Kolesov

Jan Egger

Jiashu Zhang

Kent Williams

Lauren Barber

Liangjia Zhu

Luping Fang

Martin Styner

Matt Lougheed

Matthew S. Holden

Nabgha Fahrat

Patricio Vela

Peter Savadjiev

Qing Pan

Ryan Eckbo

Sam Song

Sandy Wells

Tina Kapur

Tobias Penzkofer

Xiaojun CHEN

Xiaojun Chen

Yi Gao

Yinpeng Li

Yundi Shi

Adrien Kaiser

Alan Morris

Alexis Girault

Alireza Mehrtash

Allen Tannenbaum

and Ron Kikinis

Andinet Enquobahrie

Andras Lasso

Andrey Fedorov

Andriy Fedorov

Andriy Kot

Antonio Tristan-Vega

Arie Nakhmani

Arnaud Gelas

Atsushi Yamada

Beatriz Paniagua

Bill Lorensen

Bradley Lowekamp

Brig Bagley

Csaba Pinter

Dan Marcus

Daniel Haehn

Danny Perry

Demian Wasssermann

Dinggang Shen

Ethan Ulrich

Eugene Kholmovski

Fotis Drakopoulos

Francois Budin

Franklin King

Greg Gardner

Greg Sharp

Guillaume Pernelle

Hans Johnson

Harini Veeraraghavan

Ivan Kolesov

Jayender Jagadeesan

Jean-Christophe Fillion-Robin

Jennifer Andrea

Jessica Forbes

Jim Miller

Jonathan Bronson

Josh Cates

Julien Finet

Juliette Pera

Jun LIN

Junichi Tokuda

Karl Fritscher

Kevin Wang

Kilian Pohl

Koichiro Murakami

Laurent Chauvin

Liang-Jia Zhu

Liangjia Zhu

Luca Antiga

Luis G. Torres

Mahnaz Maddah

Manson Winsauer

Marcel Prastawa

Martha Shenton

Martin Styner

Matt Lougheed

Mattea Welch

Matthew Holden

Mauricio Reyes

Ming-ching Chang

Minjeong Kim

Nicole Aucoin

Nigel Goh

Nikos Chrisochoides

Olivier Clatz

Pat Marion

Paul Mercea

Pengdong Xiao

Peter Black

Peter Karasev

Pietro Nardelli

Rick Herrick

Rob MacLeod

Ron Kikinis

Ruifeng Chen

Salma Bengali

Sebastian Tauscher

Stefan Bauer

Stefan Lienhard

Steve Pieper

Sunil Kumar

Sylvain Bouix

Tamas Ungi

Thomas Fejes

Vinicius Boen

Vivek Narayan

Xiaodong Tao

Xiaofeng Liu

Xiaolei Chen

Yi Gao

Yingxuan Zhu

Yixun Liu

Yogesh Rathi