Documentation/4.6/SlicerApplication/LookupTables

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Overview

Slicer offers a variety of predefined lookup tables (LUT). Volumes can be associated with a LUT in the volumes module. Also, see the Colors Module.

LUTs

LUTs for Charting

Please see the Generic Chart Colors page.

LUTs in Slicer

You can review and edit LUTs in Slicer via the Colors module.

Slicer ColorPicker

The slicer colorpicker allows to select colors from a label map and to assign them to objects such as surface models or streamlines.

SlicerColorPicker-2012-02-18.png

Custom LUTs

It is relatively easy to create custom LUTs by creating a table with the colors on the wiki. This allows to select specific names and colors when segmenting. See below for an example.

integer_label text_label color notes
0 background rgba(0,0,0,0)
1 tissue rgb(128,174,128) Default label for bodily tissues
2 bone rgb(241,214,145)
3 skin rgb(177,122,101)
4 connective tissue rgb(111,184,210)

Custom LUT Examples

Brain Atlas LUTs

Useful Links