Difference between revisions of "Documentation/Nightly/Modules/FiberBundleToLabelMap"

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This work is part of the National Alliance for Medical Image Computing (NA-MIC), funded by the National Institutes of Health through the NIH Roadmap for Medical Research, Grant U54 EB005149. Information on NA-MIC can be obtained from the [http://www.na-mic.org/ NA-MIC website].<br>
 
This work is part of the National Alliance for Medical Image Computing (NA-MIC), funded by the National Institutes of Health through the NIH Roadmap for Medical Research, Grant U54 EB005149. Information on NA-MIC can be obtained from the [http://www.na-mic.org/ NA-MIC website].<br>
 
Author: Steve Pieper (SPL, Isomics, Inc.) <br>
 
Author: Steve Pieper (SPL, Isomics, Inc.) <br>
<email>spujol@bwh.harvard.edu</email><br>
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* Fiber Bundle
 
* Fiber Bundle

Revision as of 15:40, 8 July 2013

Home < Documentation < Nightly < Modules < FiberBundleToLabelMap

For the stable Slicer documentation, visit the 4.10 page.

Introduction and Acknowledgements

This work is part of the National Alliance for Medical Image Computing (NA-MIC), funded by the National Institutes of Health through the NIH Roadmap for Medical Research, Grant U54 EB005149. Information on NA-MIC can be obtained from the NA-MIC website.
Author: Steve Pieper (SPL, Isomics, Inc.)
<email>pieper@bwh.harvard.edu</email>

National Alliance for Medical Image Computing (NA-MIC)  
Neuroimage Analysis Center (NAC)  


Module Description

Example of the label map generated from a set of fibers

This module sets the specified label value in the label map at every vertex in each of the fibers in a bundle. Note that this assumes that the fibers vertices are closely spaced relative to the voxels (i.e. the Integration Step Length in the seeding module is smaller than the voxel size or some voxels could be missed.

Tutorials

Panels and their use

  • Fiber Bundle
    • Pick a fiber bundle to rasterize
  • Target Label Map
    • The fibers will be painted into this label map. Note that this will add to and overwrite existing data, but does not clear the label map to zero first.
  • Label Value
    • Numerical value to be written into the label map.


Similar Modules

Model To Label Map

References

N/A

Information for Developers

This is a python scripted module.