Difference between revisions of "Documentation/4.1/SlicerApplication/SupportedDataFormat"
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| [http://medical.nema.org/ DICOM] | | [http://medical.nema.org/ DICOM] | ||
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| − | |bgcolor="LightGreen" align="center"|yes | + | |bgcolor="LightGreen" align="center"|yes<ref>For a number of dMRI formats we recommend use of the [[Documentation/{{documentation/version}}/Modules/DicomToNrrdConverter|DICOM to NRRD converter]] before loading the data into Slicer.</ref> |
| − | |bgcolor="#f34a33" align="center"|no<ref>Limited support for writing image volumes in DICOM format is provided by the [[Documentation/ | + | |bgcolor="#f34a33" align="center"|no<ref>Limited support for writing image volumes in DICOM format is provided by the [[Documentation/{{documentation/version}}/Modules/CreateDICOMSeries|Create DICOM Series]] module</ref> |
| − | |[[Documentation/{{documentation/version}}/Modules/DICOM|DICOM]] | + | |[[Documentation/{{documentation/version}}/Modules/DICOM|DICOM]], [[Documentation/{{documentation/version}}/Modules/DicomToNrrdConverter|DICOMToNRRDConverter]], [[Documentation/{{documentation/version}}/Modules/CreateDICOMSeries|CreateDICOMSeries]] |
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| [http://teem.sourceforge.net/nrrd/format.html NRRD] | | [http://teem.sourceforge.net/nrrd/format.html NRRD] | ||
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| + | ! scope="col" colspan="4" style="border-bottom: 1px solid grey;"| Double Arrays | ||
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| + | | CSV | ||
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|bgcolor="LightGreen" align="center"|yes | |bgcolor="LightGreen" align="center"|yes | ||
|bgcolor="LightGreen" align="center"|yes | |bgcolor="LightGreen" align="center"|yes | ||
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=References= | =References= | ||
Latest revision as of 07:24, 14 June 2013
Home < Documentation < 4.1 < SlicerApplication < SupportedDataFormat
|
For the latest Slicer documentation, visit the read-the-docs. |
File formats supported by Slicer 4.1
| Format | File Name Extensions | Read | Write | Module |
|---|---|---|---|---|
| Scenes | Data | |||
| MRML | .mrml | yes | yes | Data Model |
| Raster Images this includes 2D and 3D images, and more complicated types such as DWI or DTI |
Volumes | |||
| DICOM | .dcm ... | yes[1] | no[2] | DICOM, DICOMToNRRDConverter, CreateDICOMSeries |
| NRRD | .nrrd, .nhdr | yes | yes | |
| MetaImage | .mhd, .mha | yes | yes | |
| VTK | .vtk | yes | yes | |
| Analyze | .hdr, .img, .img.gz | yes | yes | |
| NifTI | .nia, .nii, .nii.gz | yes | yes | |
| BMP | .bmp | yes | yes | |
| BioRad | .pic | yes | yes | |
| Brains2 | .mask | yes | yes | |
| GIPL | .gipl .gipl.gz | yes | yes | |
| JPEG | .jpg, .jpeg | yes | yes | |
| LSM | .lsm | yes | yes | |
| PNG | .png | yes | yes | |
| Stimulate | .spr | yes | yes | |
| TIFF | .tif, .tiff | yes | yes | |
| MGH-NMR | .mgz | yes | yes | |
| Models | Models | |||
| VTK Polygonal Data | .vtk | yes | yes | |
| VTK XML Polygonal Data | .vtp | yes | yes | |
| STL | .stl | yes | yes | |
| OBJ | .obj | yes | no | |
| Others (to be tested) | .g, .byu, .orig, .inflated, .sphere, .white, .smoothwm, .pial | yes | no | |
| Fiducials | Annotations | |||
| CSV | .fcsv | yes | yes | |
| Text | .txt | yes | yes | |
| Transforms | Transforms | |||
| Transform | .tfm, .mat | yes | yes | |
| Text | .txt | yes | yes | |
| Transfer Functions | Volume Rendering | |||
| Volume Rendering properties | .vp | yes | yes | |
| Text | .txt | yes | yes | |
| Lookup tables | Colors | |||
| Text | .txt, .ctbl | yes | yes | |
| Double Arrays | ||||
| CSV | .csv | yes | yes | |
- ↑ For a number of dMRI formats we recommend use of the DICOM to NRRD converter before loading the data into Slicer.
- ↑ Limited support for writing image volumes in DICOM format is provided by the Create DICOM Series module
