User:Yaffer

Slicer 3.4 Tutorial Comments and Edits

Slicer EM Segmentation Comments

 It takes a long time once you click run and then it seems to have no effect
 when you load the template as the foreground image.  

 Slide 31: When Changing to red slice view only, the image does not always
 automatically resize.  You have to click on the icon for fit to window.  

 Slide 44: Seems unnecessary 

 Slide 74: Before manual sampling, you must set the background to t1 and
 foreground and label to none.  Also, you must scroll to an appropriate
 slicing of the brain.  

 Slide 75: When Changing to red slice view only, the image does not always
 automatically resize.  You have to click on the icon for fit to window.  

Slicer 3 Visualization Comments Added 6/25/09

 NOTE: Slide numbers refer to slide numbers after slide 70 was removed.  

 Slide 69 and 70 are exactly the same. 
 slide 74 must include set Yellow slice clipping to off (Just for windows). 
 

 On Mac:   
  Changing to Lightbox viewer brings up the image that is loaded as the background image.  
  Must make sure that the spgr volume is loaded into background before changing the view.  

 On Linux:
  Everything seemed to happen very slowly but that is very possible that it was due to the computer I was working on.  

Slicer 3-minute:

 Slide 10: Where is the Slicer3 101 page?
 Slide 14: The folder is called Slicer3MinuteDataset
 Slide 26: Doesn't specify how to browse through the coronal slides

 No major flaws when running Slicer3.4 on Windows.

 Error occurs when trying to open the Slicer 3-minute tutorial on Windows with Firefox.

 For the Mac Intel, slide 29, there is no right click, but ctrl-click, does not zoom.  Apple-click zooms.

Slicer 3 Visualization:

 Slide 16: path is Slicer3VisualizationDataSet: Slicer3Visualization: dicom on Windows

 Slide 27: Arrow points to the wrong place

 Slide 32: The image in the drop down menu is just 001, not 001.dcm

 Slide 31: Mac Intel: Image is not automatically adjusted

 Slide 33: Only changing the drop down menu for background changes the image and clicking on the icons doesn't seem to do anything.

 For both Mac and Windows, the image is not automatically adjusted when switching from conventional layout to red slice only layout.  When you   switch back and forth multiple times, the image shrinks each time.

 Slide 36: Slicer does not automatically adjust the images to the size of the window.

 Slide 38: Should be click on File: Add volume

 Slide 42: Have to change foreground to spgr.nhdr

 Are slides 38 to 42 supposed to be there?  They are the same as 43 to 49, but 43 to 49 seem like an updated version.

 Slide 55: There are no black planes, just the slices of brain scan.

 Slide 62: You have to change the module to models.  Screenshot is outdated.

 Slide 63: Outdated screen shot.

Slicer 3.4 Bugs

Slicer 3-minute: