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Create Guide Fiber

Create Guide Fiber

User Interface

General Information

Module Type & Category

Type: CLI

Category: Diffusion.GTRACT

Authors, Collaborators & Contact

Author: This tool was developed by Vincent Magnotta and Greg Harris.


Contact: name, email

Module Description

Program title Create Guide Fiber
Program description This program will create a guide fiber by averaging fibers from a previously generated tract.
Program version 4.0.0
Program documentation-url -


Use Cases, Examples

This module is especially appropriate for these use cases:

  • Use Case 1:
  • Use Case 2:

Examples of the module in use:

  • Example 1:
  • Example 2:


  • Tutorial 1
    • Data Set 1

Quick Tour of Features and Use

A list panels in the interface, their features, what they mean, and how to use them.

  • Input Parameters
    • Input Fiber [--inputFiber] : Required: input fiber tract file name
    • Number Of Points [--numberOfPoints] : Number of points in output guide fiber Default value: 100

  • Output Files
    • Output Fiber [--outputFiber] : Required: output guide fiber file name
    • Use XML PolyData Headers [--writeXMLPolyDataFile] : Flag to make use of XML files when reading and writing vtkPolyData. Default value: 0

User Interface


Notes from the Developer(s)

Algorithms used, library classes depended upon, use cases, etc.


Other modules or packages that are required for this module's use.


On the Dashboard, these tests verify that the module is working on various platforms:

Known bugs

Links to known bugs in the Slicer3 bug tracker

Usability issues

Follow this link to the Slicer3 bug tracker. Please select the usability issue category when browsing or contributing.

Source code & documentation

Links to the module's source code:

Source code:

Doxygen documentation:

More Information


Funding for this version of the GTRACT program was provided by NIH/NINDS R01NS050568-01A2S1


Publications related to this module go here. Links to pdfs would be useful.