Documentation/4.5/Modules/maxcurvature

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This tool is deprecated!!! It is not part of DTIProcess anymore!

MaxCurvature-Hessian

MaxCurvature-Hessian

User Interface
Output computed on a Mean Diffusivity (MD) image

General Information

Module Type & Category

Type: CLI

Category: Diffusion.NIRALPipeline


Authors, Collaborators & Contact

Author: Casey Goodlett

Contributors:

Contact: name, email

Module Description

Program title MaxCurvature-Hessian
Program description This program computes the Hessian of the FA image (--image). We use this scalar image as a registration input when doing DTI atlas building. For most adult FA we use a sigma of 2 whereas for neonate or primate images and sigma of 1 or 1.5 is more appropriate. For really noisy images, 2.5 - 4 can be considered. The final image (--output) shows the main feature of the input image.
Program version 1.1.0
Program documentation-url http://www.google.com/

Usage

Quick Tour of Features and Use

A list panels in the interface, their features, what they mean, and how to use them.

  • I/O:
    • FA image file [----image] [-i]: FA Image
    • Output file [----output] [-o]: Output File
    • Scale of Gradients [----sigma] [-s]: Scale of Gradients Default value: 2
  • Advanced options:
    • Verbose [----verbose] [-v]: produce verbose output Default value: 0
User Interface


More Information

More information is available on the project webpage: http://www.nitrc.org/projects/dtiprocess

Acknowledgment

Hans Johnson(1,3,4); Kent Williams(1); (1=University of Iowa Department of Psychiatry, 3=University of Iowa Department of Biomedical Engineering, 4=University of Iowa Department of Electrical and Computer Engineering) provided conversions to make DTIProcess compatible with Slicer execution, and simplified the stand-alone build requirements by removing the dependancies on boost and a fortran compiler.