EMSegmenter-Tasks:cineMRI

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Endiastole Cine MR Segmentation

Description

-- Data Assumption
-- description of pipeline with citations to algorithms used

Anatomical Tree

-- Define Anatomical Tree used in mrml file - first list the complete name and then the abbreviating used in the mrml file

  • root
    • background
    • Myocardium
    • Right Ventricle
    • Left Ventricle

Atlas

Result

show original scans with segmentation as in the example below
EMSegment-CardioA1-grey.jpg
EMSegment-CardioA1seg.jpg

Collaborators

Benoit Desjardins (UPenn)

Acknowledgment

The construction of the pipeline was supported by funding from NIH NCRR 2P41RR013218 Supplement.

Citations