Documentation/4.2/Extensions/XNATSlicer

Introduction and Acknowledgements

Extension: XNATSlicer Acknowledgments: TBD Author: Sunil Kumar (Washington University in St. Louis) Contributors: Dan Marcus (Washington University in St. Louis), Steve Pieper (SPL) Contact: Sunil Kumar, <email>kumars@mir.wustl.edu</email>

National Alliance for Medical Image Computing (NA-MIC)   The Neuroinformatics Research Group - WUSTL

Module Description

Secure, GUI-based file I/O with any XNAT server. Win64 only.

Download and view

• Scans (individual or batch)
• Bundled Slicer scenes (*.mrb)
• Any Slicer-readable file

Upload

• Bundled Slicer scenes (*.mrb)

Additional features

• Project and folder creation
• File deletion

Panels and their use

File:XNATSlicerPanel.png XNATSlicer

IO Input: 4D DCE-MRI data; 3D mask showing the location of the arterial input function. Output: 4 volumes showing the maps of quantitative parameters: ktrans, ve, maximum slope, and area under the curve (AUC). Parameters PkModeling: T1 Blood Value T1 Tissue Value Relaxivity Value Hematocrit Value. Volume percentage of red blood cells in blood. AUC Time Interval Value: Time interval for AUC calculation Acquisition: TR Value: Repetition time, TE Value: Echo time, FA Value: Flip angle, Time Axis: Time series.