Difference between revisions of "Documentation/4.2/Extensions/XNATSlicer"

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[[File:XNATSlicer-Panel.png]]
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|[[Image:XNATSlicerPanel.png|thumb|340px|XNATSlicer]]
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* '''IO'''
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** '''Input:''' 4D DCE-MRI data; 3D mask showing the location of the arterial input function.
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** '''Output:''' 4 volumes showing the maps of quantitative parameters: ktrans, ve, maximum slope, and area under the curve (AUC).
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* '''Parameters'''
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** '''PkModeling''':
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*** T1 Blood Value
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*** T1 Tissue Value
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*** Relaxivity Value
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*** Hematocrit Value. Volume percentage of red blood cells in blood.
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*** AUC Time Interval Value: Time interval for AUC calculation
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** '''Acquisition''':
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*** TR Value: Repetition time,
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*** TE Value: Echo time,
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*** FA Value: Flip angle,
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*** Time Axis: Time series.
 
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Revision as of 20:54, 1 February 2013

Home < Documentation < 4.2 < Extensions < XNATSlicer


Introduction and Acknowledgements

XNATSlicer-Med.png
Extension: XNATSlicer
Acknowledgments: TBD
Author: Sunil Kumar (Washington University in St. Louis)
Contributors: Dan Marcus (Washington University in St. Louis), Steve Pieper (SPL)
Contact: Sunil Kumar, <email>kumars@mir.wustl.edu</email>

National Alliance for Medical Image Computing (NA-MIC)  
The Neuroinformatics Research Group - WUSTL  

Module Description

Secure, GUI-based file I/O with any XNAT server. Win64 only.

Download and view
  • Scans (individual or batch)
  • Bundled Slicer scenes (*.mrb)
  • Any Slicer-readable file
Upload
  • Bundled Slicer scenes (*.mrb)
Additional features
  • Project and folder creation
  • File deletion


Use Cases

Tutorials

Panels and their use

File:XNATSlicerPanel.png
XNATSlicer
  • IO
    • Input: 4D DCE-MRI data; 3D mask showing the location of the arterial input function.
    • Output: 4 volumes showing the maps of quantitative parameters: ktrans, ve, maximum slope, and area under the curve (AUC).
  • Parameters
    • PkModeling:
      • T1 Blood Value
      • T1 Tissue Value
      • Relaxivity Value
      • Hematocrit Value. Volume percentage of red blood cells in blood.
      • AUC Time Interval Value: Time interval for AUC calculation
    • Acquisition:
      • TR Value: Repetition time,
      • TE Value: Echo time,
      • FA Value: Flip angle,
      • Time Axis: Time series.

Similar Modules

References

Information for Developers

Work in progress
 Section under construction.
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