Difference between revisions of "Documentation/Nightly/SlicerApplication/SupportedDataFormat"
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! scope="col"| [[Documentation/{{documentation/version}}/Modules/Data|Data]] | ! scope="col"| [[Documentation/{{documentation/version}}/Modules/Data|Data]] | ||
|- | |- | ||
| − | | MRML | + | | MRML (Medical Reality Markup Language File) |
| .mrml | | .mrml | ||
|bgcolor="LightGreen" align="center"|yes | |bgcolor="LightGreen" align="center"|yes | ||
|bgcolor="LightGreen" align="center"|yes | |bgcolor="LightGreen" align="center"|yes | ||
| + | |[[Documentation/{{documentation/version}}/Developers/MRML|Data Model]] | ||
| + | |- | ||
| + | | MRB (Medical Reality Bundle) | ||
| + | | .mrb, .zip, .xar | ||
| + | |bgcolor="LightGreen" align="center"|yes | ||
| + | |bgcolor="LightGreen" align="center"|yes (.mrb extension only) | ||
|[[Documentation/{{documentation/version}}/Developers/MRML|Data Model]] | |[[Documentation/{{documentation/version}}/Developers/MRML|Data Model]] | ||
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<references/> | <references/> | ||
| + | |||
=References= | =References= | ||
* [http://www.vtk.org/Wiki/ITK_File_Formats ITK File Formats] | * [http://www.vtk.org/Wiki/ITK_File_Formats ITK File Formats] | ||
Revision as of 20:24, 6 October 2012
Home < Documentation < Nightly < SlicerApplication < SupportedDataFormat
File formats supported by Slicer Nightly
| Format | File Name Extensions | Read | Write | Module |
|---|---|---|---|---|
| Scenes | Data | |||
| MRML (Medical Reality Markup Language File) | .mrml | yes | yes | Data Model |
| MRB (Medical Reality Bundle) | .mrb, .zip, .xar | yes | yes (.mrb extension only) | Data Model |
| Raster Images this includes 2D and 3D images, and more complicated types such as DWI or DTI |
Volumes | |||
| DICOM | .dcm ... | yes[1] | no[2] | DICOM, DICOMToNRRDConverter, CreateDICOMSeries |
| NRRD | .nrrd, .nhdr | yes | yes | |
| MetaImage | .mhd, .mha | yes | yes | |
| VTK | .vtk | yes | yes | |
| Analyze | .hdr, .img, .img.gz | yes | yes | |
| NifTI | .nia, .nii, .nii.gz | yes | yes | |
| BMP | .bmp | yes | yes | |
| BioRad | .pic | yes | yes | |
| Brains2 | .mask | yes | yes | |
| GIPL | .gipl .gipl.gz | yes | yes | |
| JPEG | .jpg, .jpeg | yes | yes | |
| LSM | .lsm | yes | yes | |
| PNG | .png | yes | yes | |
| Stimulate | .spr | yes | yes | |
| TIFF | .tif, .tiff | yes | yes | |
| MGH-NMR | .mgz | yes | yes | |
| Models | Models | |||
| VTK Polygonal Data | .vtk | yes | yes | |
| VTK XML Polygonal Data | .vtp | yes | yes | |
| STL | .stl | yes | yes | |
| OBJ | .obj | yes | no | |
| Others (to be tested) | .g, .byu, .orig, .inflated, .sphere, .white, .smoothwm, .pial | yes | no | |
| Fiducials | Annotations | |||
| CSV | .fcsv | yes | yes | |
| Text | .txt | yes | yes | |
| Transforms | Transforms | |||
| Transform | .tfm, .mat | yes | yes | |
| Text | .txt | yes | yes | |
| Transfer Functions | Volume Rendering | |||
| Volume Rendering properties | .vp | yes | yes | |
| Text | .txt | yes | yes | |
| Lookup tables | Colors | |||
| Text | .txt, .ctbl | yes | yes | |
| Double Arrays | ||||
| CSV | .csv | yes | yes | |
- ↑ For a number of dMRI formats we recommend use of the DICOM to NRRD converter before loading the data into Slicer.
- ↑ Limited support for writing image volumes in DICOM format is provided by the Create DICOM Series module
