Difference between revisions of "Documentation/Nightly"

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<noinclude>{{documentation/versioncheck}}</noinclude>
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<noinclude>{{documentation/versioncheck}}
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</noinclude>
 
__NOTOC__
 
__NOTOC__
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{{documentation/versionlist}}
 
{{documentation/versionlist}}
  
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|-  
 
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|valign="top"|
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| valign="top" |
 
----
 
----
 
<span style="color: #555555; font-size: 18px; font-weight: bold;">Where to start ?</span>
 
<span style="color: #555555; font-size: 18px; font-weight: bold;">Where to start ?</span>
 
----
 
----
−
* [[New_users|Getting started]]
 
−
: Quick overview about Slicer
 
  
−
* [[Documentation/{{documentation/version}}/Training|Training pages]]
+
*[{{documentation/{{documentation/version}}/slicer-manual-base-url}}/user_guide/getting_started.html Getting started]
−
: Information on how to use Slicer {{documentation/version}}
+
 
 +
:Quick overview about Slicer
 +
 
 +
*[https://training.slicer.org/ Training pages]
 +
 
 +
:Information on how to use Slicer {{documentation/version}}
 +
 
 +
*[[Documentation/{{documentation/version}}/FAQ|FAQ]]
 +
 
 +
:Set of common questions/answers
 +
 
 +
*[https://discourse.slicer.org Discussion Forum]
  
−
* [[Documentation/{{documentation/version}}/FAQ|FAQ]]
+
:The most effective way to get help from the community
−
: Set of common questions/answers
 
  
−
* [https://discourse.slicer.org Discussion Forum]
 
−
<!--
 
−
* [http://slicer-users.65878.n3.nabble.com/ Search users mailing list]
 
−
-->
 
 
----
 
----
 
<span style="color: #555555; font-size: 18px; font-weight: bold;">How to</span>
 
<span style="color: #555555; font-size: 18px; font-weight: bold;">How to</span>
 
----
 
----
−
* [[Documentation/{{documentation/version}}/Report a problem|Report a problem]] / [[Documentation/{{documentation/version}}/Create_a_feature_request|Create a feature request]]{{new}}
+
 
 +
*[[Documentation/{{documentation/version}}/Report a problem|Report a problem]] / [[Documentation/{{documentation/version}}/Create_a_feature_request|Create a feature request]]{{new}}
 +
 
 
----
 
----
 
{{:{{FULLPAGENAME}}/SlicerApplication}}
 
{{:{{FULLPAGENAME}}/SlicerApplication}}
  
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| bgcolor="#CCCCCC" |
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|valign="top"|
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| valign="top" |
 
----
 
----
 
<span style="color: #555555; font-size: 18px; font-weight: bold;">Modules</span>
 
<span style="color: #555555; font-size: 18px; font-weight: bold;">Modules</span>
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| width="45%" |
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[[Image:DataIcon.png|32px]] [{{documentation/{{documentation/version}}/slicer-manual-base-url}}/user_guide/modules/data.html Data]
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[[Image:SlicerAnnotationsV2-Small.png|32px]] [[{{FULLPAGENAME}}/Modules/Annotations|Annotations]]
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<br />
−
<br/>
 
−
 
 
−
[[Image:DataIcon.png|32px]] [[{{FULLPAGENAME}}/Modules/Data|Data]]
 
−
<br/>
 
  
 
[[Image:DataStoreIcon_128.png|32px]] [[{{FULLPAGENAME}}/Modules/DataStore|Data Store]]
 
[[Image:DataStoreIcon_128.png|32px]] [[{{FULLPAGENAME}}/Modules/DataStore|Data Store]]
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<br/>
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<br />
−
 
 
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[[Image:DICOM.png|32px]] [[{{FULLPAGENAME}}/Modules/DICOM|DICOM]]
 
−
<br/>
 
  
−
[[Image:Editor.png|32px]] [[{{FULLPAGENAME}}/Modules/Editor|Editor]]
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[[Image:DICOM.png|32px]] [{{documentation/{{documentation/version}}/slicer-manual-base-url}}/user_guide/modules/dicom.html DICOM]
−
<br/>
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<br />
  
−
[[Image:Markups.png|32px]] [[{{FULLPAGENAME}}/Modules/Markups|Markups]]
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[[Image:Markups.png|32px]] [{{documentation/{{documentation/version}}/slicer-manual-base-url}}/user_guide/modules/markups.html Markups]
−
<br/>
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<br />
  
−
[[Image:SlicerModels-Small.png|32px]] [[{{FULLPAGENAME}}/Modules/Models|Models]]
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[[Image:SlicerModels-Small.png|32px]] [{{documentation/{{documentation/version}}/slicer-manual-base-url}}/user_guide/modules/models.html Models]
−
<br/>
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<br />
  
 
[[Image:SceneViews.png|32px]] [[{{FULLPAGENAME}}/Modules/SceneViews|Scene Views]]
 
[[Image:SceneViews.png|32px]] [[{{FULLPAGENAME}}/Modules/SceneViews|Scene Views]]
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<br/>
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<br />
−
 
 
−
[[Image:Segmentations.png|32px]] [[{{FULLPAGENAME}}/Modules/Segmentations|Segmentations]]
 
−
<br/>
 
  
−
[[Image:SegmentEditor.png|32px]] [[{{FULLPAGENAME}}/Modules/SegmentEditor|Segment Editor]]
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[[Image:Segmentations.png|32px]] [{{documentation/{{documentation/version}}/slicer-manual-base-url}}/user_guide/modules/segmentations.html Segmentations]
−
<br/>
+
<br />
  
−
[[Image:Transforms.png|32px]] [[{{FULLPAGENAME}}/Modules/Transforms|Transforms]]
+
[[Image:SegmentEditor.png|32px]] [{{documentation/{{documentation/version}}/slicer-manual-base-url}}/user_guide/modules/segmenteditor.html Segment Editor]
−
<br/>
+
<br />
  
−
[[Image:ViewControllersIcon.png|32px]] [[{{FULLPAGENAME}}/Modules/ViewControllers|View Controllers]]
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[[Image:Transforms.png|32px]] [{{documentation/{{documentation/version}}/slicer-manual-base-url}}/user_guide/modules/transforms.html Transforms]
−
<br/>
+
<br />
  
−
[[Image:VolumeRendering.png|32px]] [[{{FULLPAGENAME}}/Modules/VolumeRendering|Volume Rendering]]
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[[Image:ViewControllersIcon.png|32px]] [{{documentation/{{documentation/version}}/slicer-manual-base-url}}/user_guide/modules/viewcontrollers.html View Controllers]
−
<br/>
+
<br />
  
−
[[Image:SlicerVolume-Small.png|32px]] [[{{FULLPAGENAME}}/Modules/Volumes|Volumes]]
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[[Image:VolumeRendering.png|32px]] [{{documentation/{{documentation/version}}/slicer-manual-base-url}}/user_guide/modules/volumerendering.html Volume Rendering]
−
<br/>
+
<br />
  
−
[[Image:Welcome.png|32px]] [[{{FULLPAGENAME}}/Modules/Welcome|Welcome to Slicer]]
+
[[Image:SlicerVolume-Small.png|32px]] [{{documentation/{{documentation/version}}/slicer-manual-base-url}}/user_guide/modules/volumes.html Volumes]
−
<br/>
+
<br />
  
−
| width="50%" |
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[[Image:Welcome.png|32px]] [https://slicer.readthedocs.io/en/latest/user_guide/modules/slicerwelcome.html Welcome to Slicer]
−
 
+
<br />
−
{{:{{FULLPAGENAME}}/ModuleExtensionListing/TOC}}
 
  
 
|}
 
|}
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{{note}} What are these categories ? See [[Documentation/{{documentation/version}}/Extensions/CatalogPolicies|here]]
 
{{note}} What are these categories ? See [[Documentation/{{documentation/version}}/Extensions/CatalogPolicies|here]]
 
-->
 
-->
−
 
+
| bgcolor="#CCCCCC" |
−
|bgcolor="#CCCCCC"|
+
| valign="top" |
−
|valign="top"|
 
 
----
 
----
 
<span style="color: #555555; font-size: 18px; font-weight: bold;">Developers Corner</span>
 
<span style="color: #555555; font-size: 18px; font-weight: bold;">Developers Corner</span>
 
----
 
----
−
* [[Documentation/Nightly/Developers | Information for Software Developers]]{{updated}}
 
−
: Source code, contribute patch, develop modules
 
  
−
* [https://discourse.slicer.org Discussion Forum]
+
*[[Documentation/Nightly/Developers | Information for Software Developers]]{{updated}}
 +
 
 +
:Source code, contribute patch, develop modules
 +
 
 
<!--
 
<!--
 
* [http://massmail.bwh.harvard.edu/mailman/listinfo/slicer-devel Developers mailing list] / [http://slicer-devel.65872.n3.nabble.com/ Browse archives]
 
* [http://massmail.bwh.harvard.edu/mailman/listinfo/slicer-devel Developers mailing list] / [http://slicer-devel.65872.n3.nabble.com/ Browse archives]
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<!-- * [[Documentation/{{documentation/version}}/ImageGallery|Image gallery]] -->
 
<!-- * [[Documentation/{{documentation/version}}/ImageGallery|Image gallery]] -->
  
−
* [[Documentation/{{documentation/version}}/HowTo|Documentation guidelines]]
+
*[[Documentation/{{documentation/version}}/HowTo|Documentation guidelines]]
−
:  Slicer user documentation principle and guidelines
 
  
−
* [[Slicer4:VisualBlog|Visual blog]]
+
:Slicer user documentation principle and guidelines
−
: Set of screenshots showing Slicer in action.
 
  
−
* [[Documentation/{{documentation/version}}/ReleaseNotes|Release Notes]]
+
*[[Slicer4:VisualBlog|Visual blog]]
−
: Platform specific issues and considerations
 
  
−
* [[Documentation/{{documentation/version}}/Announcements|Announcements]] & [[Documentation/{{documentation/version}}/Acknowledgments|Acknowledgments]]
+
:Set of screenshots showing Slicer in action.
  
−
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Registration/RegistrationLibrary Registration Library]
+
*[[Documentation/{{documentation/version}}/ReleaseNotes|Release Notes]]
−
: Real-life example cases of using the Slicer registration tools,  incl. datasets and step-by-step instructions to follow and try yourself.
 
  
−
----
+
:Platform specific issues and considerations
−
<span style="color: #555555; font-size: 18px; font-weight: bold;">Documentation in other languages</span>
 
−
----
 
−
{{:{{FULLPAGENAME}}/Lang/ES}}
 
  
−
|}
+
*[[Documentation/{{documentation/version}}/Announcements|Announcements]] & [[Documentation/{{documentation/version}}/Acknowledgments|Acknowledgments]]
  
−
<!--
+
*[[Documentation/Nightly/Registration/RegistrationLibrary|Registration Library]]
−
{{:{{FULLPAGENAME}}/ModuleExtensionListing}}
 
−
-->
 
  
 +
:Real-life example cases of using the Slicer registration tools,  incl. datasets and step-by-step instructions to follow and try yourself.
  
−
{| border="0" align="center" width="100%" valign="top" cellspacing="7" cellpadding="2"
 
  
−
|- style="vertical-align:top; border-style:hidden;"
+
|}
−
 
 
−
|
 
  
−
{{:{{FULLPAGENAME}}/ModuleExtensionListing/Extensions_by_name}}
 
  
−
|
+
<span id="Modules_by_category_Diffusion_Diffusion_Data_Conversion"></span><span id="Modules_by_category_Diffusion_Diffusion_Tensor_Images"></span><span id="Modules_by_category_Diffusion_Import_and_Export"></span><span id="Modules_by_category_Diffusion_Process"></span><span id="Modules_by_category_Endoscopy"></span><span id="Modules_by_category_Filter"></span><span id="Modules_by_category_Filtering"></span><span id="Modules_by_category_Filtering_Arithmetic"></span><span id="Modules_by_category_Filtering_Denoising"></span><span id="Modules_by_category_Filtering_Morphology"></span><span id="Modules_by_category_IGT"></span><span id="Modules_by_category_Informatics"></span><span id="Modules_by_category_Informatics_Converters"></span><span id="Modules_by_category_Legacy"></span><span id="Modules_by_category_Legacy_Converters"></span><span id="Modules_by_category_Legacy_Filtering"></span><span id="Modules_by_category_Legacy_Registration"></span><span id="Modules_by_category_Quantification"></span><span id="Modules_by_category_Registration"></span><span id="Modules_by_category_Registration_Specialized"></span><span id="Modules_by_category_Segmentation"></span><span id="Modules_by_category_Segmentation_Specialized"></span><span id="Modules_by_category_Surface_Models"></span><span id="Modules_by_category_Utilities"></span><span id="Modules_by_category_Utilities_BRAINS"></span><span id="Modules_by_category_Wizards"></span><span id="Modules_by_category_Developer_Tools"></span><span id="Modules_by_category_Developer_Tools_DICOM_Plugins"></span>
−
 
 
−
<br/>
 
−
<br/>
 
−
= Modules by category =
 
−
 
 
−
== Converters ==
 
−
* [[Documentation/Nightly/Modules/CropVolume|CropVolume]]    <small>(loadable)</small>
 
−
* [[Documentation/Nightly/Modules/OrientScalarVolume|OrientScalarVolume]]    <small>(cli)</small>
 
−
* [[Documentation/Nightly/Modules/VectorToScalarVolume|VectorToScalarVolume]]    <small>(scripted)</small>
 
−
* [[Documentation/Nightly/Modules/CreateDICOMSeries|CreateDICOMSeries]]    <small>(cli)</small>
 
−
<span id='Modules_by_category_Developer_Tools'></span>
 
−
== Developer Tools ==
 
−
* [[Documentation/Nightly/Modules/Cameras|Cameras]]    <small>(loadable)</small>
 
−
* [[Documentation/Nightly/Modules/ExecutionModelTour|ExecutionModelTour]]    <small>(cli)</small>
 
−
* [[Documentation/Nightly/Modules/ExtensionWizard|ExtensionWizard]]    <small>(scripted)</small>
 
−
* [[Documentation/Nightly/Modules/EventBroker|EventBroker]]
 
−
* DoubleArrays    <small>(loadable)</small>
 
−
<span id='Modules_by_category_Developer_Tools_DICOM_Plugins'></span>
 
−
=== DICOM Plugins ===
 
−
* DICOMParametricMapPlugin
 
−
* DicomUltrasoundPlugin
 
−
* DICOMSegmentationPlugin
 
−
* DICOMSlicerDataBundlePlugin
 
−
* DICOMTID1500Plugin
 
−
* [[Documentation/Nightly/Modules/DICOMPETSUVPlugin|DICOMPETSUVPlugin]]
 
−
* DICOMScalarVolumePlugin
 
−
* DICOMDiffusionVolumePlugin
 
−
* DICOMLongitudinalPETCTPlugin
 
−
* DicomSroImportPlugin
 
−
* [[Documentation/Nightly/Modules/DICOMRWVMPlugin|DICOMRWVMPlugin]]
 
−
* DicomRtImportExportPlugin
 
−
* MultiVolumeImporterPlugin
 
−
== Diffusion ==
 
−
* [[Documentation/Nightly/Modules/DMRIInstall|DMRIInstall]]    <small>(scripted)</small>
 
−
<span id='Modules_by_category_Diffusion_Diffusion_Data_Conversion'></span>
 
−
=== Diffusion Data Conversion ===
 
−
* DWIConvert    <small>(cli)</small>
 
−
<span id='Modules_by_category_Diffusion_Diffusion_Tensor_Images'></span>
 
−
=== Diffusion Weighted Images ===
 
−
* BRAINSDWICleanup    <small>(cli)</small>
 
−
<span id='Modules_by_category_Diffusion_Import_and_Export'></span>
 
−
=== Import and Export ===
 
−
* DWIConvert    <small>(cli)</small>
 
−
<span id='Modules_by_category_Diffusion_Process'></span>
 
−
=== Utilities ===
 
−
* BRAINSDWICleanup    <small>(cli)</small>
 
−
* [[Documentation/Nightly/Modules/ResampleDTIVolume|ResampleDTIVolume]]    <small>(cli)</small>
 
−
* [[Documentation/Nightly/Modules/ResampleScalarVectorDWIVolume|ResampleScalarVectorDWIVolume]]    <small>(cli)</small>
 
−
<span id='Modules_by_category_Endoscopy'></span>
 
−
== Endoscopy ==
 
−
* [[Documentation/Nightly/Modules/Endoscopy|Endoscopy]]    <small>(scripted)</small>
 
−
<span id='Modules_by_category_Filter'></span>
 
−
== Filter ==
 
−
* IslandRemoval    <small>(cli)</small>
 
−
<span id='Modules_by_category_Filtering'></span>
 
−
== Filtering ==
 
−
* [[Documentation/Nightly/Modules/N4ITKBiasFieldCorrection|N4ITKBiasFieldCorrection]]    <small>(cli)</small>
 
−
* [[Documentation/Nightly/Modules/ImageLabelCombine|ImageLabelCombine]]    <small>(cli)</small>
 
−
* [[Documentation/Nightly/Modules/VotingBinaryHoleFillingImageFilter|VotingBinaryHoleFillingImageFilter]]    <small>(cli)</small>
 
−
* [[Documentation/Nightly/Modules/CheckerBoardFilter|CheckerBoardFilter]]    <small>(cli)</small>
 
−
* [[Documentation/Nightly/Modules/ExtractSkeleton|ExtractSkeleton]]    <small>(cli)</small>
 
−
* [[Documentation/Nightly/Modules/SimpleFilters|SimpleFilters]]    <small>(scripted)</small>
 
−
* [[Documentation/Nightly/Modules/ThresholdScalarVolume|ThresholdScalarVolume]]    <small>(cli)</small>
 
−
* [[Documentation/Nightly/Modules/HistogramMatching|HistogramMatching]]    <small>(cli)</small>
 
−
<span id='Modules_by_category_Filtering_Arithmetic'></span>
 
−
=== Arithmetic ===
 
−
* [[Documentation/Nightly/Modules/MultiplyScalarVolumes|MultiplyScalarVolumes]]    <small>(cli)</small>
 
−
* [[Documentation/Nightly/Modules/AddScalarVolumes|AddScalarVolumes]]    <small>(cli)</small>
 
−
* [[Documentation/Nightly/Modules/MaskScalarVolume|MaskScalarVolume]]    <small>(cli)</small>
 
−
* [[Documentation/Nightly/Modules/SubtractScalarVolumes|SubtractScalarVolumes]]    <small>(cli)</small>
 
−
* [[Documentation/Nightly/Modules/CastScalarVolume|CastScalarVolume]]    <small>(cli)</small>
 
−
<span id='Modules_by_category_Filtering_Denoising'></span>
 
−
=== Denoising ===
 
−
* [[Documentation/Nightly/Modules/CurvatureAnisotropicDiffusion|CurvatureAnisotropicDiffusion]]    <small>(cli)</small>
 
−
* [[Documentation/Nightly/Modules/GradientAnisotropicDiffusion|GradientAnisotropicDiffusion]]    <small>(cli)</small>
 
−
* [[Documentation/Nightly/Modules/MedianImageFilter|MedianImageFilter]]    <small>(cli)</small>
 
−
* [[Documentation/Nightly/Modules/GaussianBlurImageFilter|GaussianBlurImageFilter]]    <small>(cli)</small>
 
−
<span id='Modules_by_category_Filtering_Morphology'></span>
 
−
=== Morphology ===
 
−
* [[Documentation/Nightly/Modules/GrayscaleFillHoleImageFilter|GrayscaleFillHoleImageFilter]]    <small>(cli)</small>
 
−
* [[Documentation/Nightly/Modules/GrayscaleGrindPeakImageFilter|GrayscaleGrindPeakImageFilter]]    <small>(cli)</small>
 
−
<span id='Modules_by_category_IGT'></span>
 
−
== IGT ==
 
−
* [[Documentation/Nightly/Modules/OpenIGTLinkIF|OpenIGTLinkIF]]    <small>(loadable)</small>
 
−
<span id='Modules_by_category_Informatics'></span>
 
−
== Informatics ==
 
−
* [[Documentation/Nightly/Modules/SEG2NRRD|SEG2NRRD]]    <small>(cli)</small>
 
−
* [[Documentation/Nightly/Modules/Tables|Tables]]    <small>(loadable)</small>
 
−
* [[Documentation/Nightly/Modules/Data|Data]]    <small>(loadable)</small>
 
−
* DumpSEGFrame    <small>(cli)</small>
 
−
* Terminologies    <small>(loadable)</small>
 
−
* [[Documentation/Nightly/Modules/Units|Units]]    <small>(loadable)</small>
 
−
* [[Documentation/Nightly/Modules/DICOM|DICOM]]    <small>(scripted)</small>
 
−
* [[Documentation/Nightly/Modules/SampleData|SampleData]]    <small>(scripted)</small>
 
−
* [[Documentation/Nightly/Modules/Colors|Colors]]    <small>(loadable)</small>
 
−
* [[Documentation/Nightly/Modules/Annotations|Annotations]]    <small>(loadable)</small>
 
−
* [[Documentation/Nightly/Modules/Markups|Markups]]    <small>(loadable)</small>
 
−
* [[Documentation/Nightly/Modules/SubjectHierarchy|SubjectHierarchy]]    <small>(loadable)</small>
 
−
<span id='Modules_by_category_Informatics_Converters'></span>
 
−
=== Converters ===
 
−
* [[Documentation/Nightly/Modules/EncodeSEG|EncodeSEG]]    <small>(cli)</small>
 
−
<span id='Modules_by_category_Legacy'></span>
 
−
== Legacy ==
 
−
<span id='Modules_by_category_Legacy_Converters'></span>
 
−
=== Converters ===
 
−
* [[Documentation/Nightly/Modules/BSplineToDeformationField|BSplineToDeformationField]]    <small>(cli)</small>
 
−
<span id='Modules_by_category_Legacy_Filtering'></span>
 
−
=== Filtering ===
 
−
* [[Documentation/Nightly/Modules/OtsuThresholdImageFilter|OtsuThresholdImageFilter]]    <small>(cli)</small>
 
−
* [[Documentation/Nightly/Modules/ResampleScalarVolume|ResampleScalarVolume]]    <small>(cli)</small>
 
−
<span id='Modules_by_category_Legacy_Registration'></span>
 
−
=== Registration ===
 
−
* TestGridTransformRegistration    <small>(cli)</small>
 
−
* [[Documentation/Nightly/Modules/ExpertAutomatedRegistration|ExpertAutomatedRegistration]]    <small>(cli)</small>
 
−
== MultiVolume Support ==
 
−
* [[Documentation/Nightly/Modules/MultiVolumeImporter|MultiVolumeImporter]]    <small>(scripted)</small>
 
−
* [[Documentation/Nightly/Modules/MultiVolumeExplorer|MultiVolumeExplorer]]    <small>(loadable)</small>
 
−
<span id='Modules_by_category_Quantification'></span>
 
−
== Quantification ==
 
−
* [[Documentation/Nightly/Modules/PETStandardUptakeValueComputation|PETStandardUptakeValueComputation]]    <small>(cli)</small>
 
−
* SegmentStatistics    <small>(scripted)</small>
 
−
* [[Documentation/Nightly/Modules/LabelStatistics|LabelStatistics]]    <small>(scripted)</small>
 
−
* BRAINSLabelStats    <small>(cli)</small>
 
−
* [[Documentation/Nightly/Modules/DataProbe|DataProbe]]    <small>(scripted)</small>
 
−
<span id='Modules_by_category_Registration'></span>
 
−
== Registration ==
 
−
* [[Documentation/Nightly/Modules/Transforms|Transforms]]    <small>(loadable)</small>
 
−
* BRAINSResize    <small>(cli)</small>
 
−
* PerformMetricTest    <small>(cli)</small>
 
−
* [[Documentation/Nightly/Modules/LandmarkRegistration|LandmarkRegistration]]    <small>(scripted)</small>
 
−
* [[Documentation/Nightly/Modules/BRAINSResample|BRAINSResample]]    <small>(cli)</small>
 
−
* [[Documentation/Nightly/Modules/BRAINSFit|BRAINSFit]]    <small>(cli)</small>
 
−
<span id='Modules_by_category_Registration_Specialized'></span>
 
−
=== Specialized ===
 
−
* [[Documentation/Nightly/Modules/ACPCTransform|ACPCTransform]]    <small>(cli)</small>
 
−
* [[Documentation/Nightly/Modules/FiducialRegistration|FiducialRegistration]]    <small>(cli)</small>
 
−
* [[Documentation/Nightly/Modules/BRAINSDemonWarp|BRAINSDemonWarp]]    <small>(cli)</small>
 
−
* [[Documentation/Nightly/Modules/Reformat|Reformat]]    <small>(loadable)</small>
 
−
* VBRAINSDemonWarp    <small>(cli)</small>
 
−
<span id='Modules_by_category_Segmentation'></span>
 
−
== Segmentation ==
 
−
* EMSegmentQuick    <small>(loadable)</small>
 
−
* [[Documentation/Nightly/Modules/SegmentEditor|SegmentEditor]]    <small>(scripted)</small>
 
−
* [[Documentation/Nightly/Modules/Editor|Editor]]    <small>(scripted)</small>
 
−
* [[Documentation/Nightly/Modules/SimpleRegionGrowingSegmentation|SimpleRegionGrowingSegmentation]]    <small>(cli)</small>
 
−
* [[Documentation/Nightly/Modules/EMSegment|EMSegment]]    <small>(loadable)</small>
 
−
<span id='Modules_by_category_Segmentation_Specialized'></span>
 
−
=== Specialized ===
 
−
* BRAINSROIAuto    <small>(cli)</small>
 
−
* [[Documentation/Nightly/Modules/RobustStatisticsSegmenter|RobustStatisticsSegmenter]]    <small>(cli)</small>
 
−
* EMSegmentCommandLine    <small>(cli)</small>
 
−
<span id='Modules_by_category_Surface_Models'></span>
 
−
== Surface Models ==
 
−
* [[Documentation/Nightly/Modules/SurfaceToolbox|SurfaceToolbox]]    <small>(scripted)</small>
 
−
* [[Documentation/Nightly/Modules/GrayscaleModelMaker|GrayscaleModelMaker]]    <small>(cli)</small>
 
−
* [[Documentation/Nightly/Modules/ModelMaker|ModelMaker]]    <small>(cli)</small>
 
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* [[Documentation/Nightly/Modules/ModelToLabelMap|ModelToLabelMap]]    <small>(cli)</small>
 
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* [[Documentation/Nightly/Modules/MergeModels|MergeModels]]    <small>(cli)</small>
 
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* [[Documentation/Nightly/Modules/LabelMapSmoothing|LabelMapSmoothing]]    <small>(cli)</small>
 
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* [[Documentation/Nightly/Modules/ProbeVolumeWithModel|ProbeVolumeWithModel]]    <small>(cli)</small>
 
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<span id='Modules_by_category_Utilities'></span>
 
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== Utilities ==
 
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* [[Documentation/Nightly/Modules/ScreenCapture|ScreenCapture]]    <small>(scripted)</small>
 
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* [[Documentation/Nightly/Modules/DataStore|DataStore]]    <small>(loadable)</small>
 
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* DICOMPatcher    <small>(scripted)</small>
 
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* BRAINSStripRotation    <small>(cli)</small>
 
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* EMSegmentTransformToNewFormat    <small>(cli)</small>
 
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<span id='Modules_by_category_Utilities_BRAINS'></span>
 
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=== BRAINS ===
 
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* BRAINSTransformConvert    <small>(cli)</small>
 
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<span id='Modules_by_category_Wizards'></span>
 
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== Wizards ==
 
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* [[Documentation/Nightly/Modules/CompareVolumes|CompareVolumes]]    <small>(scripted)</small>
 
−
 
 
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|}
 

Latest revision as of 21:01, 30 December 2025

Home < Documentation < Nightly


For the latest Slicer documentation, visit the read-the-docs.



Nightly 4.10 4.8 4.6 4.5 4.4 4.3 4.2 4.1 4.0 3.6 3.5 3.4 3.2 ALL VERSIONS

Where to start ?

Quick overview about Slicer
Information on how to use Slicer Nightly
Set of common questions/answers
The most effective way to get help from the community

How to

Slicer Application


Modules

 

DataIcon.png Data

DataStoreIcon 128.png Data Store

DICOM.png DICOM

Markups.png Markups

SlicerModels-Small.png Models

SceneViews.png Scene Views

Segmentations.png Segmentations

SegmentEditor.png Segment Editor

Transforms.png Transforms

ViewControllersIcon.png View Controllers

VolumeRendering.png Volume Rendering

SlicerVolume-Small.png Volumes

Welcome.png Welcome to Slicer


Developers Corner

Source code, contribute patch, develop modules

Miscellaneous

Slicer user documentation principle and guidelines
Set of screenshots showing Slicer in action.
Platform specific issues and considerations
Real-life example cases of using the Slicer registration tools, incl. datasets and step-by-step instructions to follow and try yourself.



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