Difference between revisions of "User:UpdateBot/Issue-2843-Consolidated-Extension-List/4.4/ModuleExtensionListing"
From Slicer Wiki
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* ACPCTransform <small>(cli, built-in)</small> | * ACPCTransform <small>(cli, built-in)</small> | ||
* Add Scalar Volumes <small>(cli, built-in)</small> | * Add Scalar Volumes <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/AirwaySegmentation|Airway Segmentation CLI]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/AirwaySegmentation|Airway Segmentation]] extension)</small> |
* Annotations <small>(loadable, built-in)</small> | * Annotations <small>(loadable, built-in)</small> | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Apply Matrix]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
* [http://slicerrt.org Beams] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Beams] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|Bin Shrink]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|Body Centric Cubic Mesh]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
* BRAINSDemon Warp <small>(cli, built-in)</small> | * BRAINSDemon Warp <small>(cli, built-in)</small> | ||
* BRAINSDWICleanup <small>(cli, built-in)</small> | * BRAINSDWICleanup <small>(cli, built-in)</small> | ||
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* [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] extension)</small> | * [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] extension)</small> | ||
* Checker Board Filter <small>(cli, built-in)</small> | * Checker Board Filter <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CleaverExtension|Cleaver CLI]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CleaverExtension|Cleaver Extension]] extension)</small> |
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| Line 40: | Line 40: | ||
* [http://www.slicerigt.org Collect Fiducials] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | * [http://www.slicerigt.org Collect Fiducials] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | ||
* Colors <small>(loadable, built-in)</small> | * Colors <small>(loadable, built-in)</small> | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Compare Volumes]] <small>(scripted, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
* [http://slicerrt.org Contour Comparison] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Contour Comparison] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
* [http://slicerrt.org Contour Morphology] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Contour Morphology] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
* [http://slicerrt.org Contours] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Contours] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
* [http://www.nitrc.org/projects/ukftractography/ Convert VTK] <small>(cli, bundled in [http://www.nitrc.org/projects/ukftractography/ UKFTractography] extension)</small> | * [http://www.nitrc.org/projects/ukftractography/ Convert VTK] <small>(cli, bundled in [http://www.nitrc.org/projects/ukftractography/ UKFTractography] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] extension)</small> |
* Create DICOMSeries <small>(cli, built-in)</small> | * Create DICOMSeries <small>(cli, built-in)</small> | ||
* [http://www.slicerigt.org Create Models] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | * [http://www.slicerigt.org Create Models] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | ||
* Crop Volume <small>(loadable, built-in)</small> | * Crop Volume <small>(loadable, built-in)</small> | ||
* Curvature Anisotropic Diffusion <small>(cli, built-in)</small> | * Curvature Anisotropic Diffusion <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]] extension)</small> |
* Data <small>(loadable, built-in)</small> | * Data <small>(loadable, built-in)</small> | ||
* Data Probe <small>(scripted, built-in)</small> | * Data Probe <small>(scripted, built-in)</small> | ||
* Data Store <small>(loadable, built-in)</small> | * Data Store <small>(loadable, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/DiceComputation|Dice Computation]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/DiceComputation|Dice Computation]] extension)</small> |
* DICOM <small>(scripted, built-in)</small> | * DICOM <small>(scripted, built-in)</small> | ||
* DICOM2Full Brain Tractography <small>(scripted, built-in)</small> | * DICOM2Full Brain Tractography <small>(scripted, built-in)</small> | ||
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* Diffusion Tensor Scalar Measurements <small>(cli, built-in)</small> | * Diffusion Tensor Scalar Measurements <small>(cli, built-in)</small> | ||
* Diffusion Weighted Volume Masking <small>(cli, built-in)</small> | * Diffusion Weighted Volume Masking <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/ErodeDilateLabel|Dilate Label]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small> |
* [http://slicerrt.org Dose Accumulation] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Dose Accumulation] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
* [http://slicerrt.org Dose Comparison] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Dose Comparison] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
* [http://slicerrt.org Dose Volume Histogram] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Dose Volume Histogram] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Downsize]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
* [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] <small>(cli, bundled in [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] extension)</small> | * [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] <small>(cli, bundled in [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] extension)</small> | ||
* [http://www.nitrc.org/projects/dti_tract_stat dtitractstat] <small>(cli, bundled in [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] extension)</small> | * [http://www.nitrc.org/projects/dti_tract_stat dtitractstat] <small>(cli, bundled in [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] extension)</small> | ||
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* EMSegment Transform To New Format <small>(cli, built-in)</small> | * EMSegment Transform To New Format <small>(cli, built-in)</small> | ||
* Endoscopy <small>(scripted, built-in)</small> | * Endoscopy <small>(scripted, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Label]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small> |
* Extract Skeleton <small>(cli, built-in)</small> | * Extract Skeleton <small>(cli, built-in)</small> | ||
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut] <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut] <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> | ||
| Line 93: | Line 93: | ||
* [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] <small>(cli, bundled in [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] extension)</small> | * [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] <small>(cli, bundled in [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] extension)</small> | ||
* Gaussian Blur Image Filter <small>(cli, built-in)</small> | * Gaussian Blur Image Filter <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis]] <small>(scripted, bundled in [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis Algo]] <small>(loadable, bundled in [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis]] extension)</small> |
* Gradient Anisotropic Diffusion <small>(cli, built-in)</small> | * Gradient Anisotropic Diffusion <small>(cli, built-in)</small> | ||
* Grayscale Fill Hole Image Filter <small>(cli, built-in)</small> | * Grayscale Fill Hole Image Filter <small>(cli, built-in)</small> | ||
* Grayscale Grind Peak Image Filter <small>(cli, built-in)</small> | * Grayscale Grind Peak Image Filter <small>(cli, built-in)</small> | ||
* Grayscale Model Maker <small>(cli, built-in)</small> | * Grayscale Model Maker <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Growing]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/OpenCAD|Heterogeneity CAD]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] extension)</small> |
* Histogram Matching <small>(cli, built-in)</small> | * Histogram Matching <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|IASEMImport]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|IASEMImport Series]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> |
* [[Documentation/Nightly/Extensions/MABMIS|IGR3D MABMIS Testing]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] extension)</small> | * [[Documentation/Nightly/Extensions/MABMIS|IGR3D MABMIS Testing]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] extension)</small> | ||
* [[Documentation/Nightly/Extensions/MABMIS|IGR3D MABMIS Training]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] extension)</small> | * [[Documentation/Nightly/Extensions/MABMIS|IGR3D MABMIS Training]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] extension)</small> | ||
| Line 113: | Line 113: | ||
* [http://slicerrt.org Isodose] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Isodose] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
* [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|KUtil]] <small>(scripted, bundled in [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|Carrera Slice]] extension)</small> | * [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|KUtil]] <small>(scripted, bundled in [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|Carrera Slice]] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Label Addition]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Label Extraction]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
* Label Map Smoothing <small>(cli, built-in)</small> | * Label Map Smoothing <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|Label Object Statistics]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> |
* [[Documentation/4.2/Modules/Reporting|Label To DICOMSEGConverter]] <small>(scripted, bundled in [[Documentation/4.2/Modules/Reporting|Reporting]] extension)</small> | * [[Documentation/4.2/Modules/Reporting|Label To DICOMSEGConverter]] <small>(scripted, bundled in [[Documentation/4.2/Modules/Reporting|Reporting]] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Landmark Registration]] <small>(scripted, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small> |
* [http://capulet.med.utah.edu/namic/cmrslicer/ LASegmentation Workflow] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ LASegmentation Workflow] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
* [http://slicer.vmtk.org/ Level Set Segmentation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Level Set Segmentation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
* Markups <small>(loadable, built-in)</small> | * Markups <small>(loadable, built-in)</small> | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Mask Creation]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
* Mask Scalar Volume <small>(cli, built-in)</small> | * Mask Scalar Volume <small>(cli, built-in)</small> | ||
* Median Image Filter <small>(cli, built-in)</small> | * Median Image Filter <small>(cli, built-in)</small> | ||
* Merge Models <small>(cli, built-in)</small> | * Merge Models <small>(cli, built-in)</small> | ||
* [http://www.nitrc.org/projects/dti_tract_stat Merge Stat With Fiber] <small>(cli, bundled in [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] extension)</small> | * [http://www.nitrc.org/projects/dti_tract_stat Merge Stat With Fiber] <small>(cli, bundled in [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|Mesh Compression]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/MultidimData|Metafile Importer]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small> |
* Model Maker <small>(cli, built-in)</small> | * Model Maker <small>(cli, built-in)</small> | ||
* Models <small>(loadable, built-in)</small> | * Models <small>(loadable, built-in)</small> | ||
| Line 140: | Line 140: | ||
* N4ITKBias Field Correction <small>(cli, built-in)</small> | * N4ITKBias Field Correction <small>(cli, built-in)</small> | ||
* [https://github.com/gpernelle/NeedleFinder Needle Finder] <small>(scripted, bundled in [https://github.com/gpernelle/NeedleFinder Needle Finder] extension)</small> | * [https://github.com/gpernelle/NeedleFinder Needle Finder] <small>(scripted, bundled in [https://github.com/gpernelle/NeedleFinder Needle Finder] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Non Growing]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
* Open IGTLink IF <small>(loadable, built-in)</small> | * Open IGTLink IF <small>(loadable, built-in)</small> | ||
* [http://www.slicerigt.org Open IGTLink Remote] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | * [http://www.slicerigt.org Open IGTLink Remote] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | ||
* Orient Scalar Volume <small>(cli, built-in)</small> | * Orient Scalar Volume <small>(cli, built-in)</small> | ||
* [http://www.slicerigt.org Path Explorer] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | * [http://www.slicerigt.org Path Explorer] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] <small>(scripted, bundled in [[Documentation/Nightly/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small> |
* Perform Metric Test <small>(cli, built-in)</small> | * Perform Metric Test <small>(cli, built-in)</small> | ||
* [http://www.perktutor.org/ Perk Evaluator] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> | * [http://www.perktutor.org/ Perk Evaluator] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> | ||
* PETStandard Uptake Value Computation <small>(cli, built-in)</small> | * PETStandard Uptake Value Computation <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|PETSUVImage Maker]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
* [http://www.slicerigt.org Pivot Calibration] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | * [http://www.slicerigt.org Pivot Calibration] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | ||
* [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] <small>(cli, bundled in [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] extension)</small> | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] <small>(cli, bundled in [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] extension)</small> | ||
| Line 162: | Line 162: | ||
* [http://slicerrt.org Plm Register] <small>(scripted, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Plm Register] <small>(scripted, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
* [http://www.slicerigt.org Plus Remote] <small>(scripted, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | * [http://www.slicerigt.org Plus Remote] <small>(scripted, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]] extension)</small> |
* Probe Volume With Model <small>(cli, built-in)</small> | * Probe Volume With Model <small>(cli, built-in)</small> | ||
* [http://www.perktutor.org/ Python Metrics Calculator] <small>(scripted, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> | * [http://www.perktutor.org/ Python Metrics Calculator] <small>(scripted, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> | ||
| Line 174: | Line 174: | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ Scar Visualization] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ Scar Visualization] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
* Scene Views <small>(loadable, built-in)</small> | * Scene Views <small>(loadable, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] <small>(cli, bundled in [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/OpenCAD|Segment CAD]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/MultidimData|Sequence Browser]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/MultidimData|Sequences]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small> |
* Simple Filters <small>(scripted, built-in)</small> | * Simple Filters <small>(scripted, built-in)</small> | ||
* Simple Region Growing Segmentation <small>(cli, built-in)</small> | * Simple Region Growing Segmentation <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Modules/SobolevSegmenter|Sobolev Segmenter]] <small>(cli, bundled in [[Documentation/Nightly/Modules/SobolevSegmenter|Sobolev Segmenter]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|Spacing Aware Curvature Diffusion]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> |
* [https://www.assembla.com/spaces/Scoliosis/wiki Spinal Curvature Measurement] <small>(scripted, bundled in [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis] extension)</small> | * [https://www.assembla.com/spaces/Scoliosis/wiki Spinal Curvature Measurement] <small>(scripted, bundled in [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis] extension)</small> | ||
* Subject Hierarchy <small>(loadable, built-in)</small> | * Subject Hierarchy <small>(loadable, built-in)</small> | ||
* Subtract Scalar Volumes <small>(cli, built-in)</small> | * Subtract Scalar Volumes <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Surface Registration]] <small>(scripted, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
* Surface Toolbox <small>(scripted, built-in)</small> | * Surface Toolbox <small>(scripted, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PETDICOM|SUVFactor Calculator]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PETDICOM|PETDICOMExtension]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]] extension)</small> |
* [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] extension)</small> | * [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/ThingiverseBrowser|Thingiverse Browser]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ThingiverseBrowser|Thingiverse Browser]] extension)</small> |
* Threshold Scalar Volume <small>(cli, built-in)</small> | * Threshold Scalar Volume <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small> |
* Tractography Display <small>(loadable, built-in)</small> | * Tractography Display <small>(loadable, built-in)</small> | ||
* Tractography Interactive Seeding <small>(loadable, built-in)</small> | * Tractography Interactive Seeding <small>(loadable, built-in)</small> | ||
| Line 208: | Line 208: | ||
* [http://slicerrt.org Vff File Reader] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Vff File Reader] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
* View Controllers <small>(loadable, built-in)</small> | * View Controllers <small>(loadable, built-in)</small> | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/VolumeClip|Volume Clip With Model]] <small>(scripted, bundled in [[Documentation/4.3/Extensions/VolumeClip|Volume Clip]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/VolumeClip|Volume Clip With Roi]] <small>(scripted, bundled in [[Documentation/4.3/Extensions/VolumeClip|Volume Clip]] extension)</small> |
* Volume Rendering <small>(loadable, built-in)</small> | * Volume Rendering <small>(loadable, built-in)</small> | ||
* [http://www.slicerigt.org Volume Reslice Driver] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | * [http://www.slicerigt.org Volume Reslice Driver] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | ||
| Line 215: | Line 215: | ||
* Voting Binary Hole Filling Image Filter <small>(cli, built-in)</small> | * Voting Binary Hole Filling Image Filter <small>(cli, built-in)</small> | ||
* Welcome <small>(loadable, built-in)</small> | * Welcome <small>(loadable, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small> |
* [http://www.perktutor.org/ Workflow Segmentation] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> | * [http://www.perktutor.org/ Workflow Segmentation] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/XNATSlicer|Xnat Slicer]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] extension)</small> |
= Modules by category = | = Modules by category = | ||
36 categories: | 36 categories: | ||
| Line 307: | Line 307: | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit] | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit] | ||
== CMF Registration == | == CMF Registration == | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Apply Matrix]] |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Landmark Registration]] |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Surface Registration]] |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Label Extraction]] |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Label Addition]] |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Downsize]] |
=== Voxelbase Registration === | === Voxelbase Registration === | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Mask Creation]] |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Non Growing]] |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Growing]] |
== Converters == | == Converters == | ||
* Vector To Scalar Volume | * Vector To Scalar Volume | ||
| Line 326: | Line 326: | ||
* Execution Model Tour | * Execution Model Tour | ||
* Double Arrays | * Double Arrays | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] |
* Cameras | * Cameras | ||
* Extension Wizard | * Extension Wizard | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/ImageMaker|Image Maker]] |
=== DICOM Plugins === | === DICOM Plugins === | ||
* DICOMLongitudinal PETCTPlugin | * DICOMLongitudinal PETCTPlugin | ||
| Line 342: | Line 342: | ||
* DICOMSlicer Data Bundle Plugin | * DICOMSlicer Data Bundle Plugin | ||
=== Editor Extensions === | === Editor Extensions === | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|Binary Watershed Effect]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|Double Threshold Effect]] |
=== Matlab === | === Matlab === | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Commander]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Module Generator]] |
== Diffusion == | == Diffusion == | ||
* Tractography Display | * Tractography Display | ||
| Line 375: | Line 375: | ||
* Fiber Bundle Label Select | * Fiber Bundle Label Select | ||
== Editor Effects == | == Editor Effects == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] |
== Endoscopy == | == Endoscopy == | ||
* Endoscopy | * Endoscopy | ||
| Line 381: | Line 381: | ||
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut] | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut] | ||
* [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|Fast Grow Cut Segmenter]] | * [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|Fast Grow Cut Segmenter]] | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] |
* [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|Carrera Slice]] | * [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|Carrera Slice]] | ||
== Exporter == | == Exporter == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] |
== File == | == File == | ||
* [http://www.nitrc.org/projects/ukftractography/ Convert VTK] | * [http://www.nitrc.org/projects/ukftractography/ Convert VTK] | ||
| Line 409: | Line 409: | ||
=== Morphology === | === Morphology === | ||
* Grayscale Fill Hole Image Filter | * Grayscale Fill Hole Image Filter | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Label]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/ErodeDilateLabel|Dilate Label]] |
* Grayscale Grind Peak Image Filter | * Grayscale Grind Peak Image Filter | ||
== IGT == | == IGT == | ||
| Line 416: | Line 416: | ||
* [http://www.slicerigt.org Volume Reslice Driver] | * [http://www.slicerigt.org Volume Reslice Driver] | ||
* [http://www.slicerigt.org Collect Fiducials] | * [http://www.slicerigt.org Collect Fiducials] | ||
| − | * [ | + | * [[Documentation/Nightly/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] |
* [http://www.slicerigt.org Create Models] | * [http://www.slicerigt.org Create Models] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]] |
* Open IGTLink IF | * Open IGTLink IF | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] |
* [http://www.slicerigt.org Path Explorer] | * [http://www.slicerigt.org Path Explorer] | ||
* [http://www.slicerigt.org Ultrasound Snapshots] | * [http://www.slicerigt.org Ultrasound Snapshots] | ||
* [http://www.slicerigt.org Transform Fusion] | * [http://www.slicerigt.org Transform Fusion] | ||
* [http://www.slicerigt.org Breach Warning] | * [http://www.slicerigt.org Breach Warning] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] |
* [http://www.slicerigt.org Fiducial Registration Wizard] | * [http://www.slicerigt.org Fiducial Registration Wizard] | ||
* [http://www.slicerigt.org Open IGTLink Remote] | * [http://www.slicerigt.org Open IGTLink Remote] | ||
| Line 433: | Line 433: | ||
* [http://www.slicerigt.org Fiducials To Model Registration] | * [http://www.slicerigt.org Fiducials To Model Registration] | ||
* [http://www.slicerigt.org Pivot Calibration] | * [http://www.slicerigt.org Pivot Calibration] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] |
== Informatics == | == Informatics == | ||
* Annotations | * Annotations | ||
| Line 443: | Line 443: | ||
* Data | * Data | ||
* Colors | * Colors | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]] |
* [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] | * [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] | ||
== Legacy == | == Legacy == | ||
| Line 465: | Line 465: | ||
* Diffusion Tensor Test | * Diffusion Tensor Test | ||
== Mesh Generation == | == Mesh Generation == | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CleaverExtension|Cleaver CLI]] |
== MeshGeneration == | == MeshGeneration == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|Body Centric Cubic Mesh]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|Mesh Compression]] |
== Microscopy == | == Microscopy == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|Bin Shrink]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|Label Object Statistics]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|Spacing Aware Curvature Diffusion]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|IASEMImport]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|IASEMImport Series]] |
== Multidimensional data == | == Multidimensional data == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/MultidimData|Metafile Importer]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/MultidimData|Sequence Browser]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/MultidimData|Sequences]] |
== MultiVolume Support == | == MultiVolume Support == | ||
* Multi Volume Explorer | * Multi Volume Explorer | ||
| Line 500: | Line 500: | ||
== Quantification == | == Quantification == | ||
* PETStandard Uptake Value Computation | * PETStandard Uptake Value Computation | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PETDICOM|SUVFactor Calculator]] |
* [https://www.assembla.com/spaces/Scoliosis/wiki Spinal Curvature Measurement] | * [https://www.assembla.com/spaces/Scoliosis/wiki Spinal Curvature Measurement] | ||
* [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/OpenCAD|Heterogeneity CAD]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|PETSUVImage Maker]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/DiceComputation|Dice Computation]] |
* Data Probe | * Data Probe | ||
=== ChangeQuantification === | === ChangeQuantification === | ||
| Line 528: | Line 528: | ||
* BRAINSResize | * BRAINSResize | ||
* BRAINSFit | * BRAINSFit | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] |
* Perform Metric Test | * Perform Metric Test | ||
=== Specialized === | === Specialized === | ||
| Line 543: | Line 543: | ||
* [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] | * [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] | ||
* EMSegment | * EMSegment | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/VolumeClip|Volume Clip With Roi]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/OpenCAD|Segment CAD]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/AirwaySegmentation|Airway Segmentation CLI]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] |
| − | * [ | + | * [[Documentation/Nightly/Modules/SobolevSegmenter|Sobolev Segmenter]] |
| − | * [ | + | * [[Documentation/4.3/Extensions/VolumeClip|Volume Clip With Model]] |
* [[Documentation/Nightly/Extensions/MABMIS|IGR3D MABMIS Testing]] | * [[Documentation/Nightly/Extensions/MABMIS|IGR3D MABMIS Testing]] | ||
=== Specialized === | === Specialized === | ||
| Line 556: | Line 556: | ||
* BRAINSROIAuto | * BRAINSROIAuto | ||
== Shape Analysis == | == Shape Analysis == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]] |
== Slicelets == | == Slicelets == | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis]] |
| − | * [ | + | * [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis Algo]] |
== Surface Models == | == Surface Models == | ||
* Surface Toolbox | * Surface Toolbox | ||
| Line 611: | Line 611: | ||
* BRAINSDWICleanup | * BRAINSDWICleanup | ||
== Utilities == | == Utilities == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/ThingiverseBrowser|Thingiverse Browser]] |
* BRAINSStrip Rotation | * BRAINSStrip Rotation | ||
* EMSegment Transform To New Format | * EMSegment Transform To New Format | ||
| Line 622: | Line 622: | ||
* [http://slicer.vmtk.org/ Level Set Segmentation] | * [http://slicer.vmtk.org/ Level Set Segmentation] | ||
== Wizards == | == Wizards == | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Compare Volumes]] |
* [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] | * [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] | ||
== Work in Progress == | == Work in Progress == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] |
=== Converters === | === Converters === | ||
* [[Documentation/4.2/Modules/Reporting|Label To DICOMSEGConverter]] | * [[Documentation/4.2/Modules/Reporting|Label To DICOMSEGConverter]] | ||
| Line 634: | Line 634: | ||
* Label To DICOMSEGConverter Self Test | * Label To DICOMSEGConverter Self Test | ||
== XNATSlicer == | == XNATSlicer == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/XNATSlicer|Xnat Slicer]] |
= Modules by contributing organization = | = Modules by contributing organization = | ||
71 contributing organizations: | 71 contributing organizations: | ||
| Line 708: | Line 708: | ||
* [[#while_at_GE|while at GE]] | * [[#while_at_GE|while at GE]] | ||
== Asclepios INRIA == | == Asclepios INRIA == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] extension)</small> |
== AZE R&D == | == AZE R&D == | ||
* JRC2013Vis | * JRC2013Vis | ||
| Line 716: | Line 716: | ||
* [http://slicer.vmtk.org/ Vesselness Filtering] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Vesselness Filtering] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
== Brigham and Women's Hospital == | == Brigham and Women's Hospital == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] extension)</small> |
* Surface Toolbox <small>(scripted, built-in)</small> | * Surface Toolbox <small>(scripted, built-in)</small> | ||
* test tractography display | * test tractography display | ||
| Line 724: | Line 724: | ||
* Change Tracker Self Test | * Change Tracker Self Test | ||
* Colors Scalar Bar Self Test | * Colors Scalar Bar Self Test | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/DiceComputation|Dice Computation]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/DiceComputation|Dice Computation]] extension)</small> |
* DICOMRWVMPlugin | * DICOMRWVMPlugin | ||
* Fiducial Layout Switch Bug1914 | * Fiducial Layout Switch Bug1914 | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/OpenCAD|Heterogeneity CAD]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] extension)</small> |
* Markups <small>(loadable, built-in)</small> | * Markups <small>(loadable, built-in)</small> | ||
* Markups In Compare Viewers Self Test | * Markups In Compare Viewers Self Test | ||
* Markups In Views Self Test | * Markups In Views Self Test | ||
* Neurosurgical Planning Tutorial Markups Self Test | * Neurosurgical Planning Tutorial Markups Self Test | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] <small>(cli, bundled in [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/OpenCAD|Segment CAD]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] extension)</small> |
* Volume Rendering Scene Close <small>(scripted, built-in)</small> | * Volume Rendering Scene Close <small>(scripted, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small> |
== BWH, SPL == | == BWH, SPL == | ||
* Crop Volume <small>(loadable, built-in)</small> | * Crop Volume <small>(loadable, built-in)</small> | ||
== BWH, SUMS == | == BWH, SUMS == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] extension)</small> |
== BWH/UAB == | == BWH/UAB == | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] <small>(cli, bundled in [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] extension)</small> |
== CARMA == | == CARMA == | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| Line 757: | Line 757: | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ Scar Visualization] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ Scar Visualization] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
== College of Information Engineering, Zhejiang University of Technology, Hangzhou, China); Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China == | == College of Information Engineering, Zhejiang University of Technology, Hangzhou, China); Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] extension)</small> |
== CRTC == | == CRTC == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|Body Centric Cubic Mesh]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|Mesh Compression]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] extension)</small> |
== gatech == | == gatech == | ||
* Robust Statistics Segmenter <small>(cli, built-in)</small> | * Robust Statistics Segmenter <small>(cli, built-in)</small> | ||
| Line 790: | Line 790: | ||
* Slice Link Logic <small>(scripted, built-in)</small> | * Slice Link Logic <small>(scripted, built-in)</small> | ||
* Slicer4Minute <small>(scripted, built-in)</small> | * Slicer4Minute <small>(scripted, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|Spacing Aware Curvature Diffusion]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> |
* Subtract Scalar Volumes <small>(cli, built-in)</small> | * Subtract Scalar Volumes <small>(cli, built-in)</small> | ||
* View Controllers <small>(loadable, built-in)</small> | * View Controllers <small>(loadable, built-in)</small> | ||
| Line 801: | Line 801: | ||
== Isomics == | == Isomics == | ||
* Atlas Tests | * Atlas Tests | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|Binary Watershed Effect]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> |
* [http://slicer.vmtk.org/ Centerline Computation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Centerline Computation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Compare Volumes]] <small>(scripted, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
* Data <small>(loadable, built-in)</small> | * Data <small>(loadable, built-in)</small> | ||
* Data Probe <small>(scripted, built-in)</small> | * Data Probe <small>(scripted, built-in)</small> | ||
| Line 811: | Line 811: | ||
* Fiber Bundle To Label Map <small>(scripted, built-in)</small> | * Fiber Bundle To Label Map <small>(scripted, built-in)</small> | ||
* label Toggle Bug2049 | * label Toggle Bug2049 | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Landmark Registration]] <small>(scripted, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
* [http://slicer.vmtk.org/ Level Set Segmentation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Level Set Segmentation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
* Models <small>(loadable, built-in)</small> | * Models <small>(loadable, built-in)</small> | ||
| Line 824: | Line 824: | ||
* Simple Filters <small>(scripted, built-in)</small> | * Simple Filters <small>(scripted, built-in)</small> | ||
* slicer Close Crash Bug2590 | * slicer Close Crash Bug2590 | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small> |
* Tractography Interactive Seeding <small>(loadable, built-in)</small> | * Tractography Interactive Seeding <small>(loadable, built-in)</small> | ||
* Transforms <small>(loadable, built-in)</small> | * Transforms <small>(loadable, built-in)</small> | ||
| Line 840: | Line 840: | ||
* Threshold Threading Test | * Threshold Threading Test | ||
== Isomics, pieper@isomics.com == | == Isomics, pieper@isomics.com == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/XNATSlicer|Xnat Slicer]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] extension)</small> |
== Kingston General Hospital == | == Kingston General Hospital == | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis]] <small>(scripted, bundled in [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis]] extension)</small> |
== Kitware == | == Kitware == | ||
* Cameras <small>(loadable, built-in)</small> | * Cameras <small>(loadable, built-in)</small> | ||
| Line 858: | Line 858: | ||
* Fiducial Registration <small>(cli, built-in)</small> | * Fiducial Registration <small>(cli, built-in)</small> | ||
* Gaussian Blur Image Filter <small>(cli, built-in)</small> | * Gaussian Blur Image Filter <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/ImageMaker|Image Maker]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/ImageMaker|Image Maker]] extension)</small> |
* label Toggle Bug2049 | * label Toggle Bug2049 | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Commander]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Module Generator]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> |
* Models <small>(loadable, built-in)</small> | * Models <small>(loadable, built-in)</small> | ||
* Multi Volume Explorer <small>(loadable, built-in)</small> | * Multi Volume Explorer <small>(loadable, built-in)</small> | ||
* Multi Volume Importer <small>(scripted, built-in)</small> | * Multi Volume Importer <small>(scripted, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]] extension)</small> |
* Reformat <small>(loadable, built-in)</small> | * Reformat <small>(loadable, built-in)</small> | ||
* Sample Data <small>(scripted, built-in)</small> | * Sample Data <small>(scripted, built-in)</small> | ||
* Scene Performance <small>(scripted, built-in)</small> | * Scene Performance <small>(scripted, built-in)</small> | ||
* Simple Filters <small>(scripted, built-in)</small> | * Simple Filters <small>(scripted, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small> |
* Threshold Scalar Volume <small>(cli, built-in)</small> | * Threshold Scalar Volume <small>(cli, built-in)</small> | ||
* Tractography Display <small>(loadable, built-in)</small> | * Tractography Display <small>(loadable, built-in)</small> | ||
| Line 889: | Line 889: | ||
* [http://slicerrt.org Dicom Rt Export] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Dicom Rt Export] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
== Moka Creative, LLC, kumar.sunil.p@gmail.com == | == Moka Creative, LLC, kumar.sunil.p@gmail.com == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/XNATSlicer|Xnat Slicer]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] extension)</small> |
== MSC/NLM == | == MSC/NLM == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|Label Object Statistics]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> |
* Simple Filters <small>(scripted, built-in)</small> | * Simple Filters <small>(scripted, built-in)</small> | ||
== Noware == | == Noware == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]] extension)</small> |
== Orobix == | == Orobix == | ||
* [http://slicer.vmtk.org/ Centerline Computation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Centerline Computation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
| Line 901: | Line 901: | ||
* [http://slicer.vmtk.org/ Vesselness Filtering] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Vesselness Filtering] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
== PerkLab at Queen's University == | == PerkLab at Queen's University == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] extension)</small> |
== PerkLab, Queen's == | == PerkLab, Queen's == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/MultidimData|Metafile Importer]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/MultidimData|Sequence Browser]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/MultidimData|Sequences]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small> |
* Transforms <small>(loadable, built-in)</small> | * Transforms <small>(loadable, built-in)</small> | ||
== PerkLab, Queen's University == | == PerkLab, Queen's University == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Commander]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Module Generator]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> |
* [http://www.slicerigt.org Plus Remote] <small>(scripted, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | * [http://www.slicerigt.org Plus Remote] <small>(scripted, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/VolumeClip|Volume Clip With Model]] <small>(scripted, bundled in [[Documentation/4.3/Extensions/VolumeClip|Volume Clip]] extension)</small> |
== PMH == | == PMH == | ||
* Colors Scalar Bar Self Test | * Colors Scalar Bar Self Test | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/MultidimData|Sequence Browser]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/MultidimData|Sequences]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small> |
== PMH, Toronto == | == PMH, Toronto == | ||
* [http://slicerrt.org Dicom Rt Export] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Dicom Rt Export] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
| Line 934: | Line 934: | ||
* [http://slicerrt.org Dose Comparison] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Dose Comparison] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
* [http://slicerrt.org Dose Volume Histogram] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Dose Volume Histogram] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis Algo]] <small>(loadable, bundled in [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis]] extension)</small> |
* [http://slicerrt.org Isodose] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Isodose] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
* NAMIC Tutorial 2013June Self Test | * NAMIC Tutorial 2013June Self Test | ||
| Line 950: | Line 950: | ||
* [http://slicerrt.org Dvh Comparison] <small>(scripted, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Dvh Comparison] <small>(scripted, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
* [http://www.slicerigt.org Fiducial Registration Wizard] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | * [http://www.slicerigt.org Fiducial Registration Wizard] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis]] <small>(scripted, bundled in [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis]] extension)</small> |
* [http://www.slicerigt.org Open IGTLink Remote] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | * [http://www.slicerigt.org Open IGTLink Remote] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | ||
* [http://www.perktutor.org/ Perk Evaluator] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> | * [http://www.perktutor.org/ Perk Evaluator] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> | ||
| Line 961: | Line 961: | ||
* [http://www.perktutor.org/ Transform Recorder] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> | * [http://www.perktutor.org/ Transform Recorder] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> | ||
* [http://www.slicerigt.org Ultrasound Snapshots] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | * [http://www.slicerigt.org Ultrasound Snapshots] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/VolumeClip|Volume Clip With Roi]] <small>(scripted, bundled in [[Documentation/4.3/Extensions/VolumeClip|Volume Clip]] extension)</small> |
* [http://www.slicerigt.org Volume Reslice Driver] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | * [http://www.slicerigt.org Volume Reslice Driver] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | ||
* [http://www.perktutor.org/ Workflow Segmentation] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> | * [http://www.perktutor.org/ Workflow Segmentation] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> | ||
| Line 967: | Line 967: | ||
* Breach Warning Self Test | * Breach Warning Self Test | ||
== Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto == | == Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Commander]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Module Generator]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> |
== RMP, PMH == | == RMP, PMH == | ||
* Dicom Sro Import Plugin | * Dicom Sro Import Plugin | ||
| Line 974: | Line 974: | ||
* Volume Rendering <small>(loadable, built-in)</small> | * Volume Rendering <small>(loadable, built-in)</small> | ||
== SBU == | == SBU == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small> |
== SCI Institute == | == SCI Institute == | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CleaverExtension|Cleaver CLI]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CleaverExtension|Cleaver Extension]] extension)</small> |
== Shiga University of Medical Science in Japan == | == Shiga University of Medical Science in Japan == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] extension)</small> |
== Shiga University of Medical Science, Japan, SPL == | == Shiga University of Medical Science, Japan, SPL == | ||
| − | * [ | + | * [[Documentation/Nightly/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] <small>(scripted, bundled in [[Documentation/Nightly/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small> |
== SINAPSE == | == SINAPSE == | ||
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures] <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] extension)</small> | * [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures] <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] extension)</small> | ||
== SNR == | == SNR == | ||
* [http://www.slicerigt.org Path Explorer] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | * [http://www.slicerigt.org Path Explorer] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small> |
== SPL == | == SPL == | ||
* DICOM2Full Brain Tractography <small>(scripted, built-in)</small> | * DICOM2Full Brain Tractography <small>(scripted, built-in)</small> | ||
* Label To DICOMSEGConverter Self Test | * Label To DICOMSEGConverter Self Test | ||
| − | * [ | + | * [[Documentation/Nightly/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] <small>(scripted, bundled in [[Documentation/Nightly/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small> |
* [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] <small>(cli, bundled in [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] extension)</small> | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] <small>(cli, bundled in [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] extension)</small> | ||
* Reporting Self Test | * Reporting Self Test | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small> |
== SPL B&W Harvard == | == SPL B&W Harvard == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] extension)</small> |
== SPL, BWH == | == SPL, BWH == | ||
* ACPCTransform <small>(cli, built-in)</small> | * ACPCTransform <small>(cli, built-in)</small> | ||
| Line 1,019: | Line 1,019: | ||
* N4ITKBias Field Correction <small>(cli, built-in)</small> | * N4ITKBias Field Correction <small>(cli, built-in)</small> | ||
* PETStandard Uptake Value Computation <small>(cli, built-in)</small> | * PETStandard Uptake Value Computation <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|PETSUVImage Maker]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
* Probe Volume With Model <small>(cli, built-in)</small> | * Probe Volume With Model <small>(cli, built-in)</small> | ||
* [[Documentation/4.2/Modules/Reporting|Reporting]] <small>(loadable, bundled in [[Documentation/4.2/Modules/Reporting|Reporting]] extension)</small> | * [[Documentation/4.2/Modules/Reporting|Reporting]] <small>(loadable, bundled in [[Documentation/4.2/Modules/Reporting|Reporting]] extension)</small> | ||
* Robust Statistics Segmenter <small>(cli, built-in)</small> | * Robust Statistics Segmenter <small>(cli, built-in)</small> | ||
* Scene Views <small>(loadable, built-in)</small> | * Scene Views <small>(loadable, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PETDICOM|SUVFactor Calculator]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PETDICOM|PETDICOMExtension]] extension)</small> |
* [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] extension)</small> | * [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] extension)</small> | ||
* Test Grid Transform Registration <small>(cli, built-in)</small> | * Test Grid Transform Registration <small>(cli, built-in)</small> | ||
| Line 1,036: | Line 1,036: | ||
* Merge Models <small>(cli, built-in)</small> | * Merge Models <small>(cli, built-in)</small> | ||
== SUMS == | == SUMS == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] extension)</small> |
== Surgical Planning Lab == | == Surgical Planning Lab == | ||
* [[Documentation/4.2/Modules/Reporting|Label To DICOMSEGConverter]] <small>(scripted, bundled in [[Documentation/4.2/Modules/Reporting|Reporting]] extension)</small> | * [[Documentation/4.2/Modules/Reporting|Label To DICOMSEGConverter]] <small>(scripted, bundled in [[Documentation/4.2/Modules/Reporting|Reporting]] extension)</small> | ||
== UAB == | == UAB == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] <small>(cli, bundled in [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Modules/SobolevSegmenter|Sobolev Segmenter]] <small>(cli, bundled in [[Documentation/Nightly/Modules/SobolevSegmenter|Sobolev Segmenter]] extension)</small> |
== UHN, Toronto == | == UHN, Toronto == | ||
* [http://slicerrt.org Contour Comparison] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Contour Comparison] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
| Line 1,059: | Line 1,059: | ||
* Extract Skeleton <small>(cli, built-in)</small> | * Extract Skeleton <small>(cli, built-in)</small> | ||
* [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] <small>(cli, bundled in [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] extension)</small> | * [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] <small>(cli, bundled in [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]] extension)</small> |
* Resample DTIVolume <small>(cli, built-in)</small> | * Resample DTIVolume <small>(cli, built-in)</small> | ||
* Resample Scalar Vector DWIVolume <small>(cli, built-in)</small> | * Resample Scalar Vector DWIVolume <small>(cli, built-in)</small> | ||
== Univ of Michigan == | == Univ of Michigan == | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Surface Registration]] <small>(scripted, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
== Univ. of Iowa == | == Univ. of Iowa == | ||
* DICOMPETSUVPlugin | * DICOMPETSUVPlugin | ||
| Line 1,070: | Line 1,070: | ||
* [http://slicerrt.org Plastimatch Py] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Plastimatch Py] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
== University College Cork == | == University College Cork == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/AirwaySegmentation|Airway Segmentation CLI]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/AirwaySegmentation|Airway Segmentation]] extension)</small> |
== University of Heidelberg == | == University of Heidelberg == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
== University of Iowa == | == University of Iowa == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|PETSUVImage Maker]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/PETDICOM|SUVFactor Calculator]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PETDICOM|PETDICOMExtension]] extension)</small> |
== University of Iowa) and Andrey Fedorov (SPL == | == University of Iowa) and Andrey Fedorov (SPL == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
== UPenn == | == UPenn == | ||
* Annotations <small>(loadable, built-in)</small> | * Annotations <small>(loadable, built-in)</small> | ||
| Line 1,085: | Line 1,085: | ||
== Utah == | == Utah == | ||
* Label Map Smoothing <small>(cli, built-in)</small> | * Label Map Smoothing <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] <small>(cli, bundled in [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] extension)</small> |
== UVa == | == UVa == | ||
* DWIJoint Rician LMMSEFilter <small>(cli, built-in)</small> | * DWIJoint Rician LMMSEFilter <small>(cli, built-in)</small> | ||
| Line 1,092: | Line 1,092: | ||
* DWIUnbiased Non Local Means Filter <small>(cli, built-in)</small> | * DWIUnbiased Non Local Means Filter <small>(cli, built-in)</small> | ||
== UWA == | == UWA == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/ThingiverseBrowser|Thingiverse Browser]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ThingiverseBrowser|Thingiverse Browser]] extension)</small> |
== WashU-St. Louis, dmarcus@wustl.edu == | == WashU-St. Louis, dmarcus@wustl.edu == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/XNATSlicer|Xnat Slicer]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] extension)</small> |
== while at GE == | == while at GE == | ||
* [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] <small>(cli, bundled in [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] extension)</small> | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] <small>(cli, bundled in [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] extension)</small> | ||
| Line 1,302: | Line 1,302: | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small> |
* [http://capulet.med.utah.edu/namic/cmrslicer/ LASegmentation Workflow] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ LASegmentation Workflow] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ Scar Visualization] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ Scar Visualization] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] <small>(cli, bundled in [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] extension)</small> |
== Alex Yarmakovich == | == Alex Yarmakovich == | ||
* Models <small>(loadable, built-in)</small> | * Models <small>(loadable, built-in)</small> | ||
| Line 1,325: | Line 1,325: | ||
* [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] extension)</small> | * [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] extension)</small> | ||
== Allen Tannenbaum == | == Allen Tannenbaum == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small> |
* Robust Statistics Segmenter <small>(cli, built-in)</small> | * Robust Statistics Segmenter <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] <small>(cli, bundled in [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Modules/SobolevSegmenter|Sobolev Segmenter]] <small>(cli, bundled in [[Documentation/Nightly/Modules/SobolevSegmenter|Sobolev Segmenter]] extension)</small> |
== Amelie Meyer == | == Amelie Meyer == | ||
* [http://www.slicerigt.org Plus Remote] <small>(scripted, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | * [http://www.slicerigt.org Plus Remote] <small>(scripted, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | ||
== Analysis Laboratory == | == Analysis Laboratory == | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Apply Matrix]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Downsize]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Growing]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Label Addition]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Label Extraction]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Mask Creation]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Non Growing]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
== Andinet Enquobahrie == | == Andinet Enquobahrie == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]] extension)</small> |
== Andras Lasso == | == Andras Lasso == | ||
* [http://slicerrt.org Contour Comparison] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Contour Comparison] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
| Line 1,351: | Line 1,351: | ||
* [http://slicerrt.org Dose Volume Histogram] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Dose Volume Histogram] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
* [http://slicerrt.org Isodose] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Isodose] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Commander]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Module Generator]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/MultidimData|Metafile Importer]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small> |
* [http://www.slicerigt.org Plus Remote] <small>(scripted, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | * [http://www.slicerigt.org Plus Remote] <small>(scripted, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/MultidimData|Sequence Browser]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/MultidimData|Sequences]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small> |
* Transforms <small>(loadable, built-in)</small> | * Transforms <small>(loadable, built-in)</small> | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/VolumeClip|Volume Clip With Model]] <small>(scripted, bundled in [[Documentation/4.3/Extensions/VolumeClip|Volume Clip]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/VolumeClip|Volume Clip With Roi]] <small>(scripted, bundled in [[Documentation/4.3/Extensions/VolumeClip|Volume Clip]] extension)</small> |
== Andreas Freudling == | == Andreas Freudling == | ||
* Volume Rendering <small>(loadable, built-in)</small> | * Volume Rendering <small>(loadable, built-in)</small> | ||
== Andrey Fedorov == | == Andrey Fedorov == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|Body Centric Cubic Mesh]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
* BSpline To Deformation Field <small>(cli, built-in)</small> | * BSpline To Deformation Field <small>(cli, built-in)</small> | ||
* [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] extension)</small> | * [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] extension)</small> | ||
| Line 1,374: | Line 1,374: | ||
* [[Documentation/4.2/Modules/Reporting|Label To DICOMSEGConverter]] <small>(scripted, bundled in [[Documentation/4.2/Modules/Reporting|Reporting]] extension)</small> | * [[Documentation/4.2/Modules/Reporting|Label To DICOMSEGConverter]] <small>(scripted, bundled in [[Documentation/4.2/Modules/Reporting|Reporting]] extension)</small> | ||
* Label To DICOMSEGConverter Self Test | * Label To DICOMSEGConverter Self Test | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|Mesh Compression]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
* Multi Volume Explorer <small>(loadable, built-in)</small> | * Multi Volume Explorer <small>(loadable, built-in)</small> | ||
* Multi Volume Importer <small>(scripted, built-in)</small> | * Multi Volume Importer <small>(scripted, built-in)</small> | ||
* Multi Volume Importer Plugin | * Multi Volume Importer Plugin | ||
* N4ITKBias Field Correction <small>(cli, built-in)</small> | * N4ITKBias Field Correction <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] extension)</small> |
* [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] <small>(cli, bundled in [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] extension)</small> | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] <small>(cli, bundled in [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] extension)</small> | ||
* [[Documentation/4.2/Modules/Reporting|Reporting]] <small>(loadable, bundled in [[Documentation/4.2/Modules/Reporting|Reporting]] extension)</small> | * [[Documentation/4.2/Modules/Reporting|Reporting]] <small>(loadable, bundled in [[Documentation/4.2/Modules/Reporting|Reporting]] extension)</small> | ||
* Reporting Self Test | * Reporting Self Test | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PETDICOM|SUVFactor Calculator]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PETDICOM|PETDICOMExtension]] extension)</small> |
* [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] extension)</small> | * [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small> |
== Andriy Kot == | == Andriy Kot == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] extension)</small> |
== Anonymous == | == Anonymous == | ||
* CLIROITest <small>(cli, built-in)</small> | * CLIROITest <small>(cli, built-in)</small> | ||
| Line 1,403: | Line 1,403: | ||
* [http://www.nitrc.org/projects/dti_tract_stat dtitractstat] <small>(cli, bundled in [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] extension)</small> | * [http://www.nitrc.org/projects/dti_tract_stat dtitractstat] <small>(cli, bundled in [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] extension)</small> | ||
== Arie Nakhmani == | == Arie Nakhmani == | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/SobolevSegmenter|Sobolev Segmenter]] <small>(cli, bundled in [[Documentation/Nightly/Modules/SobolevSegmenter|Sobolev Segmenter]] extension)</small> |
== Atsushi Yamada == | == Atsushi Yamada == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] extension)</small> |
* [http://www.slicerigt.org Path Explorer] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | * [http://www.slicerigt.org Path Explorer] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | ||
== Beatriz Paniagua from Department of Orthodontics == | == Beatriz Paniagua from Department of Orthodontics == | ||
| Line 1,431: | Line 1,431: | ||
* Otsu Threshold Image Filter <small>(cli, built-in)</small> | * Otsu Threshold Image Filter <small>(cli, built-in)</small> | ||
* Resample Scalar Volume <small>(cli, built-in)</small> | * Resample Scalar Volume <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|Spacing Aware Curvature Diffusion]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> |
* Subtract Scalar Volumes <small>(cli, built-in)</small> | * Subtract Scalar Volumes <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]] extension)</small> |
* Voting Binary Hole Filling Image Filter <small>(cli, built-in)</small> | * Voting Binary Hole Filling Image Filter <small>(cli, built-in)</small> | ||
== Brad Davis == | == Brad Davis == | ||
* EMSegment Command Line <small>(cli, built-in)</small> | * EMSegment Command Line <small>(cli, built-in)</small> | ||
== Bradley Lowekamp == | == Bradley Lowekamp == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|Bin Shrink]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|Double Threshold Effect]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|IASEMImport]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|IASEMImport Series]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|Label Object Statistics]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> |
* Simple Filters <small>(scripted, built-in)</small> | * Simple Filters <small>(scripted, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|Spacing Aware Curvature Diffusion]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> |
== Brian Zenger == | == Brian Zenger == | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| Line 1,478: | Line 1,478: | ||
* [http://slicerrt.org Dose Volume Histogram] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Dose Volume Histogram] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
* [http://slicerrt.org Dvh Comparison] <small>(scripted, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Dvh Comparison] <small>(scripted, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis]] <small>(scripted, bundled in [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis Algo]] <small>(loadable, bundled in [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis]] extension)</small> |
* [http://slicerrt.org Isodose] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Isodose] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
* NAMIC Tutorial 2013June Self Test | * NAMIC Tutorial 2013June Self Test | ||
| Line 1,488: | Line 1,488: | ||
* [http://slicerrt.org Vff File Reader] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Vff File Reader] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
== Dan Marcus == | == Dan Marcus == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/XNATSlicer|Xnat Slicer]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] extension)</small> |
== Daniel Blezek == | == Daniel Blezek == | ||
* Execution Model Tour <small>(cli, built-in)</small> | * Execution Model Tour <small>(cli, built-in)</small> | ||
| Line 1,502: | Line 1,502: | ||
== Danny Perry == | == Danny Perry == | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] <small>(cli, bundled in [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] extension)</small> |
== Demian Wassermann == | == Demian Wassermann == | ||
* DICOM2Full Brain Tractography <small>(scripted, built-in)</small> | * DICOM2Full Brain Tractography <small>(scripted, built-in)</small> | ||
| Line 1,522: | Line 1,522: | ||
* Dicom Rt Import Plugin | * Dicom Rt Import Plugin | ||
== er == | == er == | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis]] <small>(scripted, bundled in [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis]] extension)</small> |
== Ethan Ulrich == | == Ethan Ulrich == | ||
* DICOMPETSUVPlugin | * DICOMPETSUVPlugin | ||
* DICOMRWVMPlugin | * DICOMRWVMPlugin | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PETDICOM|SUVFactor Calculator]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PETDICOM|PETDICOMExtension]] extension)</small> |
== Eugene Kholmovski == | == Eugene Kholmovski == | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| Line 1,534: | Line 1,534: | ||
* DWIUnbiased Non Local Means Filter <small>(cli, built-in)</small> | * DWIUnbiased Non Local Means Filter <small>(cli, built-in)</small> | ||
== Fotis Drakopoulos == | == Fotis Drakopoulos == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|Body Centric Cubic Mesh]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|Mesh Compression]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] extension)</small> |
== Francois Budin == | == Francois Budin == | ||
* [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] <small>(cli, bundled in [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] extension)</small> | * [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] <small>(cli, bundled in [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] extension)</small> | ||
* [http://www.nitrc.org/projects/dti_tract_stat dtitractstat] <small>(cli, bundled in [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] extension)</small> | * [http://www.nitrc.org/projects/dti_tract_stat dtitractstat] <small>(cli, bundled in [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] extension)</small> | ||
* [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] <small>(cli, bundled in [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] extension)</small> | * [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] <small>(cli, bundled in [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]] extension)</small> |
* Resample DTIVolume <small>(cli, built-in)</small> | * Resample DTIVolume <small>(cli, built-in)</small> | ||
* Resample Scalar Vector DWIVolume <small>(cli, built-in)</small> | * Resample Scalar Vector DWIVolume <small>(cli, built-in)</small> | ||
| Line 1,556: | Line 1,556: | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] <small>(cli, bundled in [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] extension)</small> |
== Greg Harris == | == Greg Harris == | ||
* BRAINSDemon Warp <small>(cli, built-in)</small> | * BRAINSDemon Warp <small>(cli, built-in)</small> | ||
| Line 1,584: | Line 1,584: | ||
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures] <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] extension)</small> | * [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures] <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] extension)</small> | ||
* DWIConvert <small>(cli, built-in)</small> | * DWIConvert <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|PETSUVImage Maker]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/PETDICOM|SUVFactor Calculator]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PETDICOM|PETDICOMExtension]] extension)</small> |
* [http://www.nitrc.org/projects/ukftractography/ UKFTractography] <small>(cli, bundled in [http://www.nitrc.org/projects/ukftractography/ UKFTractography] extension)</small> | * [http://www.nitrc.org/projects/ukftractography/ UKFTractography] <small>(cli, bundled in [http://www.nitrc.org/projects/ukftractography/ UKFTractography] extension)</small> | ||
== hans-johnson -at- uiowa.edu == | == hans-johnson -at- uiowa.edu == | ||
| Line 1,597: | Line 1,597: | ||
== Ipek Oguz == | == Ipek Oguz == | ||
* [http://www.nitrc.org/projects/ukftractography/ Convert VTK] <small>(cli, bundled in [http://www.nitrc.org/projects/ukftractography/ UKFTractography] extension)</small> | * [http://www.nitrc.org/projects/ukftractography/ Convert VTK] <small>(cli, bundled in [http://www.nitrc.org/projects/ukftractography/ UKFTractography] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]] extension)</small> |
* [http://www.nitrc.org/projects/ukftractography/ UKFTractography] <small>(cli, bundled in [http://www.nitrc.org/projects/ukftractography/ UKFTractography] extension)</small> | * [http://www.nitrc.org/projects/ukftractography/ UKFTractography] <small>(cli, bundled in [http://www.nitrc.org/projects/ukftractography/ UKFTractography] extension)</small> | ||
== Ivan Kolesov == | == Ivan Kolesov == | ||
| Line 1,604: | Line 1,604: | ||
* [https://github.com/gpernelle/iGyne i Gyne] <small>(scripted, bundled in [https://github.com/gpernelle/iGyne i Gyne] extension)</small> | * [https://github.com/gpernelle/iGyne i Gyne] <small>(scripted, bundled in [https://github.com/gpernelle/iGyne i Gyne] extension)</small> | ||
== Jayender Jagadeesan == | == Jayender Jagadeesan == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/OpenCAD|Heterogeneity CAD]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/OpenCAD|Segment CAD]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small> |
== Jean-Baptiste Berger == | == Jean-Baptiste Berger == | ||
* Data Store <small>(loadable, built-in)</small> | * Data Store <small>(loadable, built-in)</small> | ||
| Line 1,619: | Line 1,619: | ||
* fiber visibility crash2438 | * fiber visibility crash2438 | ||
* label Toggle Bug2049 | * label Toggle Bug2049 | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Commander]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Module Generator]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> |
* Multi Volume Explorer <small>(loadable, built-in)</small> | * Multi Volume Explorer <small>(loadable, built-in)</small> | ||
* Multi Volume Importer <small>(scripted, built-in)</small> | * Multi Volume Importer <small>(scripted, built-in)</small> | ||
* Sample Data <small>(scripted, built-in)</small> | * Sample Data <small>(scripted, built-in)</small> | ||
* Simple Filters <small>(scripted, built-in)</small> | * Simple Filters <small>(scripted, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small> |
* Transforms <small>(loadable, built-in)</small> | * Transforms <small>(loadable, built-in)</small> | ||
* View Controllers <small>(loadable, built-in)</small> | * View Controllers <small>(loadable, built-in)</small> | ||
* Welcome <small>(loadable, built-in)</small> | * Welcome <small>(loadable, built-in)</small> | ||
== Jennifer Andrea == | == Jennifer Andrea == | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis]] <small>(scripted, bundled in [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis]] extension)</small> |
* [http://slicerrt.org Vff File Reader] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Vff File Reader] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
== Jessica Forbes == | == Jessica Forbes == | ||
| Line 1,647: | Line 1,647: | ||
* [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] <small>(cli, bundled in [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] extension)</small> | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] <small>(cli, bundled in [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] extension)</small> | ||
== Jonathan Bronson == | == Jonathan Bronson == | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CleaverExtension|Cleaver CLI]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CleaverExtension|Cleaver Extension]] extension)</small> |
== Josh Cates == | == Josh Cates == | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| Line 1,660: | Line 1,660: | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
* Label Map Smoothing <small>(cli, built-in)</small> | * Label Map Smoothing <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small> |
* [http://capulet.med.utah.edu/namic/cmrslicer/ LASegmentation Workflow] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ LASegmentation Workflow] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ Scar Visualization] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ Scar Visualization] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] <small>(cli, bundled in [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] extension)</small> |
== Joy Matsui == | == Joy Matsui == | ||
* DWIConvert <small>(cli, built-in)</small> | * DWIConvert <small>(cli, built-in)</small> | ||
| Line 1,672: | Line 1,672: | ||
* Double Arrays <small>(loadable, built-in)</small> | * Double Arrays <small>(loadable, built-in)</small> | ||
* Event Broker | * Event Broker | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/ImageMaker|Image Maker]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/ImageMaker|Image Maker]] extension)</small> |
* Models <small>(loadable, built-in)</small> | * Models <small>(loadable, built-in)</small> | ||
* Multi Volume Explorer <small>(loadable, built-in)</small> | * Multi Volume Explorer <small>(loadable, built-in)</small> | ||
| Line 1,686: | Line 1,686: | ||
* Gaussian Blur Image Filter <small>(cli, built-in)</small> | * Gaussian Blur Image Filter <small>(cli, built-in)</small> | ||
== Junichi Tokuda == | == Junichi Tokuda == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/ErodeDilateLabel|Dilate Label]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Label]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small> |
* [http://www.slicerigt.org Path Explorer] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | * [http://www.slicerigt.org Path Explorer] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] <small>(scripted, bundled in [[Documentation/Nightly/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small> |
* [http://www.slicerigt.org Volume Reslice Driver] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | * [http://www.slicerigt.org Volume Reslice Driver] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | ||
== K == | == K == | ||
| Line 1,704: | Line 1,704: | ||
* BRAINSStrip Rotation <small>(cli, built-in)</small> | * BRAINSStrip Rotation <small>(cli, built-in)</small> | ||
== Kevin Alex == | == Kevin Alex == | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis]] <small>(scripted, bundled in [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis]] extension)</small> |
== Kevin Wang == | == Kevin Wang == | ||
* Colors Scalar Bar Self Test | * Colors Scalar Bar Self Test | ||
| Line 1,719: | Line 1,719: | ||
* [http://slicerrt.org Dose Volume Histogram] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Dose Volume Histogram] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
* [http://slicerrt.org Isodose] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Isodose] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Commander]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Module Generator]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/MultidimData|Sequence Browser]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/MultidimData|Sequences]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small> |
== Kilian Pohl == | == Kilian Pohl == | ||
* Annotations <small>(loadable, built-in)</small> | * Annotations <small>(loadable, built-in)</small> | ||
| Line 1,730: | Line 1,730: | ||
* Scene Views <small>(loadable, built-in)</small> | * Scene Views <small>(loadable, built-in)</small> | ||
== Koichiro Murakami == | == Koichiro Murakami == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] <small>(scripted, bundled in [[Documentation/Nightly/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small> |
== Kyle Sunderl == | == Kyle Sunderl == | ||
* [http://slicerrt.org Dvh Comparison] <small>(scripted, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Dvh Comparison] <small>(scripted, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
| Line 1,743: | Line 1,743: | ||
* Probe Volume With Model <small>(cli, built-in)</small> | * Probe Volume With Model <small>(cli, built-in)</small> | ||
== Laurent Chauvin == | == Laurent Chauvin == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/DiceComputation|Dice Computation]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/DiceComputation|Dice Computation]] extension)</small> |
* [http://www.slicerigt.org Path Explorer] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | * [http://www.slicerigt.org Path Explorer] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] <small>(scripted, bundled in [[Documentation/Nightly/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small> |
== Liang-Jia Zhu == | == Liang-Jia Zhu == | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] <small>(cli, bundled in [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] extension)</small> |
== Liangjia Zhu == | == Liangjia Zhu == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small> |
== Luca Antiga == | == Luca Antiga == | ||
* [http://slicer.vmtk.org/ Centerline Computation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Centerline Computation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
| Line 1,758: | Line 1,758: | ||
* [http://slicer.vmtk.org/ Vesselness Filtering] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Vesselness Filtering] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
== Luis G. Torres == | == Luis G. Torres == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]] extension)</small> |
== Luping Fang == | == Luping Fang == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] extension)</small> |
== m == | == m == | ||
* Dicom Rt Import Plugin | * Dicom Rt Import Plugin | ||
| Line 1,770: | Line 1,770: | ||
* DWIConvert <small>(cli, built-in)</small> | * DWIConvert <small>(cli, built-in)</small> | ||
== Markus Van Tol == | == Markus Van Tol == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|PETSUVImage Maker]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/PETDICOM|SUVFactor Calculator]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PETDICOM|PETDICOMExtension]] extension)</small> |
== Martin Styner == | == Martin Styner == | ||
* [http://www.nitrc.org/projects/ukftractography/ Convert VTK] <small>(cli, bundled in [http://www.nitrc.org/projects/ukftractography/ UKFTractography] extension)</small> | * [http://www.nitrc.org/projects/ukftractography/ Convert VTK] <small>(cli, bundled in [http://www.nitrc.org/projects/ukftractography/ UKFTractography] extension)</small> | ||
| Line 1,779: | Line 1,779: | ||
* [http://www.nitrc.org/projects/ukftractography/ UKFTractography] <small>(cli, bundled in [http://www.nitrc.org/projects/ukftractography/ UKFTractography] extension)</small> | * [http://www.nitrc.org/projects/ukftractography/ UKFTractography] <small>(cli, bundled in [http://www.nitrc.org/projects/ukftractography/ UKFTractography] extension)</small> | ||
== Mason Winsauer == | == Mason Winsauer == | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Apply Matrix]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Downsize]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Growing]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Label Addition]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Label Extraction]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Mask Creation]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Non Growing]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
== Matt Lougheed == | == Matt Lougheed == | ||
* [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/ResectionPlanner Resection Volume] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/ResectionPlanner Resection Planner] extension)</small> | * [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/ResectionPlanner Resection Volume] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/ResectionPlanner Resection Planner] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/VolumeClip|Volume Clip With Model]] <small>(scripted, bundled in [[Documentation/4.3/Extensions/VolumeClip|Volume Clip]] extension)</small> |
== Mattea Welch == | == Mattea Welch == | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis]] <small>(scripted, bundled in [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis]] extension)</small> |
== Matthew Holden == | == Matthew Holden == | ||
* [http://www.slicerigt.org Breach Warning] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | * [http://www.slicerigt.org Breach Warning] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | ||
* [http://www.slicerigt.org Fiducial Registration Wizard] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | * [http://www.slicerigt.org Fiducial Registration Wizard] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/MultidimData|Metafile Importer]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small> |
* [http://www.perktutor.org/ Python Metrics Calculator] <small>(scripted, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> | * [http://www.perktutor.org/ Python Metrics Calculator] <small>(scripted, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/MultidimData|Sequence Browser]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/MultidimData|Sequences]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small> |
== Matthew S. Holden == | == Matthew S. Holden == | ||
* [http://www.perktutor.org/ Perk Evaluator] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> | * [http://www.perktutor.org/ Perk Evaluator] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> | ||
| Line 1,813: | Line 1,813: | ||
* [https://github.com/gpernelle/NeedleFinder Needle Finder] <small>(scripted, bundled in [https://github.com/gpernelle/NeedleFinder Needle Finder] extension)</small> | * [https://github.com/gpernelle/NeedleFinder Needle Finder] <small>(scripted, bundled in [https://github.com/gpernelle/NeedleFinder Needle Finder] extension)</small> | ||
== Neuro Image Resarch == | == Neuro Image Resarch == | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Apply Matrix]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Downsize]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Growing]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Label Addition]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Label Extraction]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Mask Creation]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Non Growing]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
== Nicholas Herlambang == | == Nicholas Herlambang == | ||
* JRC2013Vis | * JRC2013Vis | ||
| Line 1,844: | Line 1,844: | ||
* Neurosurgical Planning Tutorial Markups Self Test | * Neurosurgical Planning Tutorial Markups Self Test | ||
* PETStandard Uptake Value Computation <small>(cli, built-in)</small> | * PETStandard Uptake Value Computation <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|PETSUVImage Maker]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
* [[Documentation/4.2/Modules/Reporting|Reporting]] <small>(loadable, bundled in [[Documentation/4.2/Modules/Reporting|Reporting]] extension)</small> | * [[Documentation/4.2/Modules/Reporting|Reporting]] <small>(loadable, bundled in [[Documentation/4.2/Modules/Reporting|Reporting]] extension)</small> | ||
* Scene Views <small>(loadable, built-in)</small> | * Scene Views <small>(loadable, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PETDICOM|SUVFactor Calculator]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PETDICOM|PETDICOMExtension]] extension)</small> |
* Threshold Scalar Volume <small>(cli, built-in)</small> | * Threshold Scalar Volume <small>(cli, built-in)</small> | ||
* Volume Rendering Scene Close <small>(scripted, built-in)</small> | * Volume Rendering Scene Close <small>(scripted, built-in)</small> | ||
* Volumes <small>(loadable, built-in)</small> | * Volumes <small>(loadable, built-in)</small> | ||
== Nigel Goh == | == Nigel Goh == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/ThingiverseBrowser|Thingiverse Browser]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ThingiverseBrowser|Thingiverse Browser]] extension)</small> |
== Nikos Chrisochoides == | == Nikos Chrisochoides == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|Body Centric Cubic Mesh]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|Mesh Compression]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] extension)</small> |
== Olivier Clatz == | == Olivier Clatz == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] extension)</small> |
== p == | == p == | ||
* Dicom Rt Import Plugin | * Dicom Rt Import Plugin | ||
| Line 1,864: | Line 1,864: | ||
* [http://slicerrt.org Plastimatch Py] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Plastimatch Py] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
== Pat Marion == | == Pat Marion == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small> |
== Paul Mercea == | == Paul Mercea == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
== Pengdong Xiao == | == Pengdong Xiao == | ||
* [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] <small>(cli, bundled in [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] extension)</small> | * [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] <small>(cli, bundled in [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] extension)</small> | ||
| Line 1,880: | Line 1,880: | ||
* Extract Skeleton <small>(cli, built-in)</small> | * Extract Skeleton <small>(cli, built-in)</small> | ||
== Pietro Nardelli == | == Pietro Nardelli == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/AirwaySegmentation|Airway Segmentation CLI]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/AirwaySegmentation|Airway Segmentation]] extension)</small> |
== Please direct questions or suggestions to http://groups.google.com/group/plastimatch == | == Please direct questions or suggestions to http://groups.google.com/group/plastimatch == | ||
* [http://slicerrt.org plastimatch slicer bspline] <small>(cli, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org plastimatch slicer bspline] <small>(cli, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
| Line 1,890: | Line 1,890: | ||
* EMSegment Command Line <small>(cli, built-in)</small> | * EMSegment Command Line <small>(cli, built-in)</small> | ||
== Qing Pan == | == Qing Pan == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] extension)</small> |
== R == | == R == | ||
* Dicom Rt Import Plugin | * Dicom Rt Import Plugin | ||
| Line 1,910: | Line 1,910: | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small> |
* [http://capulet.med.utah.edu/namic/cmrslicer/ LASegmentation Workflow] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ LASegmentation Workflow] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ Scar Visualization] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ Scar Visualization] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] <small>(cli, bundled in [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] extension)</small> |
== Ron Kikinis == | == Ron Kikinis == | ||
* ACPCTransform <small>(cli, built-in)</small> | * ACPCTransform <small>(cli, built-in)</small> | ||
| Line 1,926: | Line 1,926: | ||
* N4ITKBias Field Correction <small>(cli, built-in)</small> | * N4ITKBias Field Correction <small>(cli, built-in)</small> | ||
* PETStandard Uptake Value Computation <small>(cli, built-in)</small> | * PETStandard Uptake Value Computation <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|PETSUVImage Maker]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
* Robust Statistics Segmenter <small>(cli, built-in)</small> | * Robust Statistics Segmenter <small>(cli, built-in)</small> | ||
* Surface Toolbox <small>(scripted, built-in)</small> | * Surface Toolbox <small>(scripted, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PETDICOM|SUVFactor Calculator]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PETDICOM|PETDICOMExtension]] extension)</small> |
* Threshold Scalar Volume <small>(cli, built-in)</small> | * Threshold Scalar Volume <small>(cli, built-in)</small> | ||
* View Controllers <small>(loadable, built-in)</small> | * View Controllers <small>(loadable, built-in)</small> | ||
| Line 1,936: | Line 1,936: | ||
* Label Map Smoothing <small>(cli, built-in)</small> | * Label Map Smoothing <small>(cli, built-in)</small> | ||
== Ruifeng Chen == | == Ruifeng Chen == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] extension)</small> |
== S == | == S == | ||
* Dicom Rt Import Plugin | * Dicom Rt Import Plugin | ||
| Line 1,963: | Line 1,963: | ||
* EMSegment Command Line <small>(cli, built-in)</small> | * EMSegment Command Line <small>(cli, built-in)</small> | ||
== Shigeyuki Naka == | == Shigeyuki Naka == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] extension)</small> |
== Soichiro Tani == | == Soichiro Tani == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] extension)</small> |
== Sonia Pujol == | == Sonia Pujol == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/DiceComputation|Dice Computation]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/DiceComputation|Dice Computation]] extension)</small> |
* DTIexport <small>(cli, built-in)</small> | * DTIexport <small>(cli, built-in)</small> | ||
* DTIimport <small>(cli, built-in)</small> | * DTIimport <small>(cli, built-in)</small> | ||
| Line 1,980: | Line 1,980: | ||
== Steve Pieper == | == Steve Pieper == | ||
* Atlas Tests | * Atlas Tests | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|Binary Watershed Effect]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> |
* [http://slicer.vmtk.org/ Centerline Computation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Centerline Computation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Compare Volumes]] <small>(scripted, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
* Data Probe <small>(scripted, built-in)</small> | * Data Probe <small>(scripted, built-in)</small> | ||
* DICOM <small>(scripted, built-in)</small> | * DICOM <small>(scripted, built-in)</small> | ||
| Line 1,993: | Line 1,993: | ||
* Fiber Bundle To Label Map <small>(scripted, built-in)</small> | * Fiber Bundle To Label Map <small>(scripted, built-in)</small> | ||
* label Toggle Bug2049 | * label Toggle Bug2049 | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Landmark Registration]] <small>(scripted, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
* [http://slicer.vmtk.org/ Level Set Segmentation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Level Set Segmentation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
* Multi Volume Explorer <small>(loadable, built-in)</small> | * Multi Volume Explorer <small>(loadable, built-in)</small> | ||
| Line 2,008: | Line 2,008: | ||
* slicer Close Crash Bug2590 | * slicer Close Crash Bug2590 | ||
* Slicer MRBTest | * Slicer MRBTest | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small> |
* Threshold Threading Test | * Threshold Threading Test | ||
* Vector To Scalar Volume <small>(scripted, built-in)</small> | * Vector To Scalar Volume <small>(scripted, built-in)</small> | ||
| Line 2,014: | Line 2,014: | ||
* View Controllers <small>(loadable, built-in)</small> | * View Controllers <small>(loadable, built-in)</small> | ||
* Volumes <small>(loadable, built-in)</small> | * Volumes <small>(loadable, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/XNATSlicer|Xnat Slicer]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] extension)</small> |
== Sunil Kumar == | == Sunil Kumar == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/XNATSlicer|Xnat Slicer]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] extension)</small> |
== Sylvain Bouix == | == Sylvain Bouix == | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] <small>(cli, bundled in [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] extension)</small> |
== Sylvain Gouttard == | == Sylvain Gouttard == | ||
* [http://www.nitrc.org/projects/dti_tract_stat dtitractstat] <small>(cli, bundled in [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] extension)</small> | * [http://www.nitrc.org/projects/dti_tract_stat dtitractstat] <small>(cli, bundled in [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] extension)</small> | ||
| Line 2,050: | Line 2,050: | ||
* [https://github.com/gpernelle/iGyne i Gyne] <small>(scripted, bundled in [https://github.com/gpernelle/iGyne i Gyne] extension)</small> | * [https://github.com/gpernelle/iGyne i Gyne] <small>(scripted, bundled in [https://github.com/gpernelle/iGyne i Gyne] extension)</small> | ||
== Tohru Tani == | == Tohru Tani == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] extension)</small> |
== UNC Medical School == | == UNC Medical School == | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Apply Matrix]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Downsize]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Growing]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Label Addition]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Label Extraction]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Mask Creation]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Non Growing]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
== UofM School Of Dentistry == | == UofM School Of Dentistry == | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Growing]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
== UofM School of Dentistry == | == UofM School of Dentistry == | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Apply Matrix]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Downsize]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Label Addition]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Label Extraction]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Mask Creation]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Non Growing]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
== Vince Magnotta == | == Vince Magnotta == | ||
* DWIConvert <small>(cli, built-in)</small> | * DWIConvert <small>(cli, built-in)</small> | ||
| Line 2,075: | Line 2,075: | ||
* BRAINSResample <small>(cli, built-in)</small> | * BRAINSResample <small>(cli, built-in)</small> | ||
== Vinicius Boen == | == Vinicius Boen == | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Apply Matrix]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Downsize]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Growing]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Label Addition]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Label Extraction]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Mask Creation]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Non Growing]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Surface Registration]] <small>(scripted, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
== Vivek Narayan == | == Vivek Narayan == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/OpenCAD|Heterogeneity CAD]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/OpenCAD|Segment CAD]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] extension)</small> |
== Wendy Plesniak == | == Wendy Plesniak == | ||
* Annotations <small>(loadable, built-in)</small> | * Annotations <small>(loadable, built-in)</small> | ||
* PETStandard Uptake Value Computation <small>(cli, built-in)</small> | * PETStandard Uptake Value Computation <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|PETSUVImage Maker]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
* Scene Views <small>(loadable, built-in)</small> | * Scene Views <small>(loadable, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PETDICOM|SUVFactor Calculator]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PETDICOM|PETDICOMExtension]] extension)</small> |
* View Controllers <small>(loadable, built-in)</small> | * View Controllers <small>(loadable, built-in)</small> | ||
* Welcome <small>(loadable, built-in)</small> | * Welcome <small>(loadable, built-in)</small> | ||
| Line 2,109: | Line 2,109: | ||
== Yi Gao == | == Yi Gao == | ||
* [https://github.com/gpernelle/iGyne i Gyne] <small>(scripted, bundled in [https://github.com/gpernelle/iGyne i Gyne] extension)</small> | * [https://github.com/gpernelle/iGyne i Gyne] <small>(scripted, bundled in [https://github.com/gpernelle/iGyne i Gyne] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small> |
* [https://github.com/gpernelle/NeedleFinder Needle Finder] <small>(scripted, bundled in [https://github.com/gpernelle/NeedleFinder Needle Finder] extension)</small> | * [https://github.com/gpernelle/NeedleFinder Needle Finder] <small>(scripted, bundled in [https://github.com/gpernelle/NeedleFinder Needle Finder] extension)</small> | ||
* Robust Statistics Segmenter <small>(cli, built-in)</small> | * Robust Statistics Segmenter <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] <small>(cli, bundled in [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] extension)</small> |
== Yinglin Lee == | == Yinglin Lee == | ||
* Test Grid Transform Registration <small>(cli, built-in)</small> | * Test Grid Transform Registration <small>(cli, built-in)</small> | ||
| Line 2,121: | Line 2,121: | ||
* [http://www.nitrc.org/projects/ukftractography/ UKFTractography] <small>(cli, bundled in [http://www.nitrc.org/projects/ukftractography/ UKFTractography] extension)</small> | * [http://www.nitrc.org/projects/ukftractography/ UKFTractography] <small>(cli, bundled in [http://www.nitrc.org/projects/ukftractography/ UKFTractography] extension)</small> | ||
== Yixun Liu == | == Yixun Liu == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|Body Centric Cubic Mesh]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|Mesh Compression]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] extension)</small> |
== Yogesh Rathi == | == Yogesh Rathi == | ||
* [http://www.nitrc.org/projects/ukftractography/ Convert VTK] <small>(cli, bundled in [http://www.nitrc.org/projects/ukftractography/ UKFTractography] extension)</small> | * [http://www.nitrc.org/projects/ukftractography/ Convert VTK] <small>(cli, bundled in [http://www.nitrc.org/projects/ukftractography/ UKFTractography] extension)</small> | ||
| Line 2,144: | Line 2,144: | ||
* ACPCTransform <small>(cli, built-in)</small> | * ACPCTransform <small>(cli, built-in)</small> | ||
* Add Scalar Volumes <small>(cli, built-in)</small> | * Add Scalar Volumes <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/AirwaySegmentation|Airway Segmentation CLI]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/AirwaySegmentation|Airway Segmentation]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Apply Matrix]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|Bin Shrink]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|Body Centric Cubic Mesh]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
* BRAINSDemon Warp <small>(cli, built-in)</small> | * BRAINSDemon Warp <small>(cli, built-in)</small> | ||
* BRAINSDWICleanup <small>(cli, built-in)</small> | * BRAINSDWICleanup <small>(cli, built-in)</small> | ||
| Line 2,160: | Line 2,160: | ||
* Cast Scalar Volume <small>(cli, built-in)</small> | * Cast Scalar Volume <small>(cli, built-in)</small> | ||
* Checker Board Filter <small>(cli, built-in)</small> | * Checker Board Filter <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CleaverExtension|Cleaver CLI]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CleaverExtension|Cleaver Extension]] extension)</small> |
* CLIROITest <small>(cli, built-in)</small> | * CLIROITest <small>(cli, built-in)</small> | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar] <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| Line 2,175: | Line 2,175: | ||
* Diffusion Tensor Test <small>(cli, built-in)</small> | * Diffusion Tensor Test <small>(cli, built-in)</small> | ||
* Diffusion Weighted Volume Masking <small>(cli, built-in)</small> | * Diffusion Weighted Volume Masking <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/ErodeDilateLabel|Dilate Label]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Downsize]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
* [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] <small>(cli, bundled in [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] extension)</small> | * [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] <small>(cli, bundled in [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] extension)</small> | ||
* DTIexport <small>(cli, built-in)</small> | * DTIexport <small>(cli, built-in)</small> | ||
| Line 2,188: | Line 2,188: | ||
* EMSegment Command Line <small>(cli, built-in)</small> | * EMSegment Command Line <small>(cli, built-in)</small> | ||
* EMSegment Transform To New Format <small>(cli, built-in)</small> | * EMSegment Transform To New Format <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Label]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small> |
* Execution Model Tour <small>(cli, built-in)</small> | * Execution Model Tour <small>(cli, built-in)</small> | ||
* Expert Automated Registration <small>(cli, built-in)</small> | * Expert Automated Registration <small>(cli, built-in)</small> | ||
| Line 2,202: | Line 2,202: | ||
* Grayscale Grind Peak Image Filter <small>(cli, built-in)</small> | * Grayscale Grind Peak Image Filter <small>(cli, built-in)</small> | ||
* Grayscale Model Maker <small>(cli, built-in)</small> | * Grayscale Model Maker <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Growing]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
* Histogram Matching <small>(cli, built-in)</small> | * Histogram Matching <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|IASEMImport]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|IASEMImport Series]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> |
* [[Documentation/Nightly/Extensions/MABMIS|IGR3D MABMIS Testing]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] extension)</small> | * [[Documentation/Nightly/Extensions/MABMIS|IGR3D MABMIS Testing]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] extension)</small> | ||
* [[Documentation/Nightly/Extensions/MABMIS|IGR3D MABMIS Training]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] extension)</small> | * [[Documentation/Nightly/Extensions/MABMIS|IGR3D MABMIS Training]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] extension)</small> | ||
* Image Label Combine <small>(cli, built-in)</small> | * Image Label Combine <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/ImageMaker|Image Maker]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/ImageMaker|Image Maker]] extension)</small> |
* [[Documentation/Nightly/Extensions/ChangeTracker|Intensity Difference Metric]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] extension)</small> | * [[Documentation/Nightly/Extensions/ChangeTracker|Intensity Difference Metric]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] extension)</small> | ||
* [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] <small>(cli, bundled in [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] extension)</small> | * [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] <small>(cli, bundled in [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Label Addition]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Label Extraction]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
* Label Map Smoothing <small>(cli, built-in)</small> | * Label Map Smoothing <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Mask Creation]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
* Mask Scalar Volume <small>(cli, built-in)</small> | * Mask Scalar Volume <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Commander]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> |
* Median Image Filter <small>(cli, built-in)</small> | * Median Image Filter <small>(cli, built-in)</small> | ||
* Merge Models <small>(cli, built-in)</small> | * Merge Models <small>(cli, built-in)</small> | ||
* [http://www.nitrc.org/projects/dti_tract_stat Merge Stat With Fiber] <small>(cli, bundled in [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] extension)</small> | * [http://www.nitrc.org/projects/dti_tract_stat Merge Stat With Fiber] <small>(cli, bundled in [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|Mesh Compression]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]] extension)</small> |
* Model Maker <small>(cli, built-in)</small> | * Model Maker <small>(cli, built-in)</small> | ||
* Model To Label Map <small>(cli, built-in)</small> | * Model To Label Map <small>(cli, built-in)</small> | ||
* Multiply Scalar Volumes <small>(cli, built-in)</small> | * Multiply Scalar Volumes <small>(cli, built-in)</small> | ||
* N4ITKBias Field Correction <small>(cli, built-in)</small> | * N4ITKBias Field Correction <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Non Growing]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
* Orient Scalar Volume <small>(cli, built-in)</small> | * Orient Scalar Volume <small>(cli, built-in)</small> | ||
* Otsu Threshold Image Filter <small>(cli, built-in)</small> | * Otsu Threshold Image Filter <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] extension)</small> |
* Perform Metric Test <small>(cli, built-in)</small> | * Perform Metric Test <small>(cli, built-in)</small> | ||
* PETStandard Uptake Value Computation <small>(cli, built-in)</small> | * PETStandard Uptake Value Computation <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|PETSUVImage Maker]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
* [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] <small>(cli, bundled in [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] extension)</small> | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] <small>(cli, bundled in [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] extension)</small> | ||
* [http://slicerrt.org plastimatch slicer bspline] <small>(cli, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org plastimatch slicer bspline] <small>(cli, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
| Line 2,246: | Line 2,246: | ||
* Resample Scalar Volume <small>(cli, built-in)</small> | * Resample Scalar Volume <small>(cli, built-in)</small> | ||
* Robust Statistics Segmenter <small>(cli, built-in)</small> | * Robust Statistics Segmenter <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] <small>(cli, bundled in [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] extension)</small> |
* Simple Region Growing Segmentation <small>(cli, built-in)</small> | * Simple Region Growing Segmentation <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/SobolevSegmenter|Sobolev Segmenter]] <small>(cli, bundled in [[Documentation/Nightly/Modules/SobolevSegmenter|Sobolev Segmenter]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|Spacing Aware Curvature Diffusion]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> |
* Subtract Scalar Volumes <small>(cli, built-in)</small> | * Subtract Scalar Volumes <small>(cli, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PETDICOM|SUVFactor Calculator]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PETDICOM|PETDICOMExtension]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]] extension)</small> |
* Test Grid Transform Registration <small>(cli, built-in)</small> | * Test Grid Transform Registration <small>(cli, built-in)</small> | ||
* Threshold Scalar Volume <small>(cli, built-in)</small> | * Threshold Scalar Volume <small>(cli, built-in)</small> | ||
| Line 2,274: | Line 2,274: | ||
* Data <small>(loadable, built-in)</small> | * Data <small>(loadable, built-in)</small> | ||
* Data Store <small>(loadable, built-in)</small> | * Data Store <small>(loadable, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/DiceComputation|Dice Computation]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/DiceComputation|Dice Computation]] extension)</small> |
* [http://slicerrt.org Dicom Rt Export] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Dicom Rt Export] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
* [http://slicerrt.org Dicom Rt Import] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Dicom Rt Import] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
| Line 2,287: | Line 2,287: | ||
* [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|Fast Grow Cut Segmenter]] <small>(loadable, bundled in [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|Carrera Slice]] extension)</small> | * [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|Fast Grow Cut Segmenter]] <small>(loadable, bundled in [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|Carrera Slice]] extension)</small> | ||
* [http://www.slicerigt.org Fiducial Registration Wizard] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | * [http://www.slicerigt.org Fiducial Registration Wizard] <small>(loadable, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis Algo]] <small>(loadable, bundled in [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis]] extension)</small> |
* [http://slicerrt.org Isodose] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Isodose] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
* Markups <small>(loadable, built-in)</small> | * Markups <small>(loadable, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Module Generator]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/MultidimData|Metafile Importer]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small> |
* Models <small>(loadable, built-in)</small> | * Models <small>(loadable, built-in)</small> | ||
* Multi Volume Explorer <small>(loadable, built-in)</small> | * Multi Volume Explorer <small>(loadable, built-in)</small> | ||
| Line 2,305: | Line 2,305: | ||
* [[Documentation/4.2/Modules/Reporting|Reporting]] <small>(loadable, bundled in [[Documentation/4.2/Modules/Reporting|Reporting]] extension)</small> | * [[Documentation/4.2/Modules/Reporting|Reporting]] <small>(loadable, bundled in [[Documentation/4.2/Modules/Reporting|Reporting]] extension)</small> | ||
* Scene Views <small>(loadable, built-in)</small> | * Scene Views <small>(loadable, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/MultidimData|Sequence Browser]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/MultidimData|Sequences]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small> |
* Subject Hierarchy <small>(loadable, built-in)</small> | * Subject Hierarchy <small>(loadable, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small> |
* Tractography Display <small>(loadable, built-in)</small> | * Tractography Display <small>(loadable, built-in)</small> | ||
* Tractography Interactive Seeding <small>(loadable, built-in)</small> | * Tractography Interactive Seeding <small>(loadable, built-in)</small> | ||
| Line 2,324: | Line 2,324: | ||
* [http://www.perktutor.org/ Workflow Segmentation] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> | * [http://www.perktutor.org/ Workflow Segmentation] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> | ||
== scripted == | == scripted == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|Binary Watershed Effect]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> |
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures] <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] extension)</small> | * [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures] <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] extension)</small> | ||
* [http://slicer.vmtk.org/ Centerline Computation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Centerline Computation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
| Line 2,332: | Line 2,332: | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Compare Volumes]] <small>(scripted, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]] extension)</small> |
* Data Probe <small>(scripted, built-in)</small> | * Data Probe <small>(scripted, built-in)</small> | ||
* DICOM <small>(scripted, built-in)</small> | * DICOM <small>(scripted, built-in)</small> | ||
* DICOM2Full Brain Tractography <small>(scripted, built-in)</small> | * DICOM2Full Brain Tractography <small>(scripted, built-in)</small> | ||
* [http://slicerrt.org Dicom Sro Export] <small>(scripted, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Dicom Sro Export] <small>(scripted, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|Double Threshold Effect]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> |
* [http://slicerrt.org Dvh Comparison] <small>(scripted, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Dvh Comparison] <small>(scripted, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
* Endoscopy <small>(scripted, built-in)</small> | * Endoscopy <small>(scripted, built-in)</small> | ||
| Line 2,345: | Line 2,345: | ||
* Fiber Bundle To Label Map <small>(scripted, built-in)</small> | * Fiber Bundle To Label Map <small>(scripted, built-in)</small> | ||
* [http://www.slicerigt.org Fiducials To Model Registration] <small>(scripted, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | * [http://www.slicerigt.org Fiducials To Model Registration] <small>(scripted, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis]] <small>(scripted, bundled in [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/OpenCAD|Heterogeneity CAD]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] extension)</small> |
* [https://github.com/gpernelle/iGyne i Gyne] <small>(scripted, bundled in [https://github.com/gpernelle/iGyne i Gyne] extension)</small> | * [https://github.com/gpernelle/iGyne i Gyne] <small>(scripted, bundled in [https://github.com/gpernelle/iGyne i Gyne] extension)</small> | ||
* [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|KUtil]] <small>(scripted, bundled in [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|Carrera Slice]] extension)</small> | * [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|KUtil]] <small>(scripted, bundled in [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|Carrera Slice]] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|Label Object Statistics]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> |
* [[Documentation/4.2/Modules/Reporting|Label To DICOMSEGConverter]] <small>(scripted, bundled in [[Documentation/4.2/Modules/Reporting|Reporting]] extension)</small> | * [[Documentation/4.2/Modules/Reporting|Label To DICOMSEGConverter]] <small>(scripted, bundled in [[Documentation/4.2/Modules/Reporting|Reporting]] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Landmark Registration]] <small>(scripted, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
* [http://capulet.med.utah.edu/namic/cmrslicer/ LASegmentation Workflow] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | * [http://capulet.med.utah.edu/namic/cmrslicer/ LASegmentation Workflow] <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small> | ||
* [http://slicer.vmtk.org/ Level Set Segmentation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Level Set Segmentation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
* Multi Volume Importer <small>(scripted, built-in)</small> | * Multi Volume Importer <small>(scripted, built-in)</small> | ||
* [https://github.com/gpernelle/NeedleFinder Needle Finder] <small>(scripted, bundled in [https://github.com/gpernelle/NeedleFinder Needle Finder] extension)</small> | * [https://github.com/gpernelle/NeedleFinder Needle Finder] <small>(scripted, bundled in [https://github.com/gpernelle/NeedleFinder Needle Finder] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] <small>(scripted, bundled in [[Documentation/Nightly/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small> |
* [http://slicerrt.org Plm Register] <small>(scripted, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Plm Register] <small>(scripted, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
* [http://www.slicerigt.org Plus Remote] <small>(scripted, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | * [http://www.slicerigt.org Plus Remote] <small>(scripted, bundled in [http://www.slicerigt.org Slicer IGT] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] extension)</small> |
* [http://www.perktutor.org/ Python Metrics Calculator] <small>(scripted, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> | * [http://www.perktutor.org/ Python Metrics Calculator] <small>(scripted, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> | ||
* [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/ResectionPlanner Resection Volume] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/ResectionPlanner Resection Planner] extension)</small> | * [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/ResectionPlanner Resection Volume] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/ResectionPlanner Resection Planner] extension)</small> | ||
| Line 2,368: | Line 2,368: | ||
* Scene Performance <small>(scripted, built-in)</small> | * Scene Performance <small>(scripted, built-in)</small> | ||
* [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis Monitoring] <small>(scripted, bundled in [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis] extension)</small> | * [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis Monitoring] <small>(scripted, bundled in [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/OpenCAD|Segment CAD]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] extension)</small> |
* Simple Filters <small>(scripted, built-in)</small> | * Simple Filters <small>(scripted, built-in)</small> | ||
* Slice Link Logic <small>(scripted, built-in)</small> | * Slice Link Logic <small>(scripted, built-in)</small> | ||
* Slicer4Minute <small>(scripted, built-in)</small> | * Slicer4Minute <small>(scripted, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small> |
* [https://www.assembla.com/spaces/Scoliosis/wiki Spinal Curvature Measurement] <small>(scripted, bundled in [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis] extension)</small> | * [https://www.assembla.com/spaces/Scoliosis/wiki Spinal Curvature Measurement] <small>(scripted, bundled in [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Surface Registration]] <small>(scripted, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
* Surface Toolbox <small>(scripted, built-in)</small> | * Surface Toolbox <small>(scripted, built-in)</small> | ||
* [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] extension)</small> | * [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] extension)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/ThingiverseBrowser|Thingiverse Browser]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ThingiverseBrowser|Thingiverse Browser]] extension)</small> |
* Vector To Scalar Volume <small>(scripted, built-in)</small> | * Vector To Scalar Volume <small>(scripted, built-in)</small> | ||
* [http://slicer.vmtk.org/ Vesselness Filtering] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Vesselness Filtering] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/VolumeClip|Volume Clip With Model]] <small>(scripted, bundled in [[Documentation/4.3/Extensions/VolumeClip|Volume Clip]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/VolumeClip|Volume Clip With Roi]] <small>(scripted, bundled in [[Documentation/4.3/Extensions/VolumeClip|Volume Clip]] extension)</small> |
* Volume Rendering Scene Close <small>(scripted, built-in)</small> | * Volume Rendering Scene Close <small>(scripted, built-in)</small> | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/XNATSlicer|Xnat Slicer]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] extension)</small> |
= Modules by extension = | = Modules by extension = | ||
55 extensions: | 55 extensions: | ||
| Line 2,445: | Line 2,445: | ||
* [http://www.nitrc.org/projects/abc ABC] <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small> | * [http://www.nitrc.org/projects/abc ABC] <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small> | ||
== AirwaySegmentation == | == AirwaySegmentation == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/AirwaySegmentation|Airway Segmentation CLI]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/AirwaySegmentation|Airway Segmentation]] extension)</small> |
== builtin == | == builtin == | ||
* ACPCTransform <small>(cli, built-in)</small> | * ACPCTransform <small>(cli, built-in)</small> | ||
| Line 2,572: | Line 2,572: | ||
* [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|KUtil]] <small>(scripted, bundled in [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|Carrera Slice]] extension)</small> | * [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|KUtil]] <small>(scripted, bundled in [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|Carrera Slice]] extension)</small> | ||
== CBC_3D_I2MConversion == | == CBC_3D_I2MConversion == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|Body Centric Cubic Mesh]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|Mesh Compression]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small> |
== ChangeTracker == | == ChangeTracker == | ||
* [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] extension)</small> | * [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] extension)</small> | ||
* [[Documentation/Nightly/Extensions/ChangeTracker|Intensity Difference Metric]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] extension)</small> | * [[Documentation/Nightly/Extensions/ChangeTracker|Intensity Difference Metric]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] extension)</small> | ||
== CleaverExtension == | == CleaverExtension == | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CleaverExtension|Cleaver CLI]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CleaverExtension|Cleaver Extension]] extension)</small> |
== CMFreg == | == CMFreg == | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Apply Matrix]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Compare Volumes]] <small>(scripted, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Downsize]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Growing]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Label Addition]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Label Extraction]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Landmark Registration]] <small>(scripted, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Mask Creation]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Non Growing]] <small>(cli, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|Surface Registration]] <small>(scripted, bundled in [[Documentation/4.3/Extensions/CMFreg|CMFreg]] extension)</small> |
== CornerAnnotation == | == CornerAnnotation == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] extension)</small> |
== CurveMaker == | == CurveMaker == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]] extension)</small> |
== DiceComputation == | == DiceComputation == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/DiceComputation|Dice Computation]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/DiceComputation|Dice Computation]] extension)</small> |
== DTIAtlasFiberAnalyzer == | == DTIAtlasFiberAnalyzer == | ||
* [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] <small>(cli, bundled in [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] extension)</small> | * [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] <small>(cli, bundled in [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] extension)</small> | ||
| Line 2,602: | Line 2,602: | ||
* [http://www.nitrc.org/projects/dti_tract_stat Merge Stat With Fiber] <small>(cli, bundled in [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] extension)</small> | * [http://www.nitrc.org/projects/dti_tract_stat Merge Stat With Fiber] <small>(cli, bundled in [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] extension)</small> | ||
== ErodeDilateLabel == | == ErodeDilateLabel == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/ErodeDilateLabel|Dilate Label]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Label]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small> |
== FastGrowCutEffect == | == FastGrowCutEffect == | ||
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut] <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut] <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> | ||
| Line 2,610: | Line 2,610: | ||
* [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] <small>(cli, bundled in [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] extension)</small> | * [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] <small>(cli, bundled in [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] extension)</small> | ||
== GelDosimetryAnalysis == | == GelDosimetryAnalysis == | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis]] <small>(scripted, bundled in [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis Algo]] <small>(loadable, bundled in [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis]] extension)</small> |
== GyroGuide == | == GyroGuide == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] extension)</small> |
== IASEM == | == IASEM == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|Binary Watershed Effect]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|Bin Shrink]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|Double Threshold Effect]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|IASEMImport]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|IASEMImport Series]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|Label Object Statistics]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|Spacing Aware Curvature Diffusion]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/IASEM|IASEM]] extension)</small> |
== iGyne == | == iGyne == | ||
* [https://github.com/gpernelle/iGyne i Gyne] <small>(scripted, bundled in [https://github.com/gpernelle/iGyne i Gyne] extension)</small> | * [https://github.com/gpernelle/iGyne i Gyne] <small>(scripted, bundled in [https://github.com/gpernelle/iGyne i Gyne] extension)</small> | ||
== ImageMaker == | == ImageMaker == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/ImageMaker|Image Maker]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/ImageMaker|Image Maker]] extension)</small> |
== IntensitySegmenter == | == IntensitySegmenter == | ||
* [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] <small>(cli, bundled in [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] extension)</small> | * [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] <small>(cli, bundled in [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] extension)</small> | ||
== LAScarSegmenter == | == LAScarSegmenter == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small> |
== LongitudinalPETCT == | == LongitudinalPETCT == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|PETSUVImage Maker]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small> |
== MABMIS == | == MABMIS == | ||
* [[Documentation/Nightly/Extensions/MABMIS|IGR3D MABMIS Testing]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] extension)</small> | * [[Documentation/Nightly/Extensions/MABMIS|IGR3D MABMIS Testing]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] extension)</small> | ||
* [[Documentation/Nightly/Extensions/MABMIS|IGR3D MABMIS Training]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] extension)</small> | * [[Documentation/Nightly/Extensions/MABMIS|IGR3D MABMIS Training]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] extension)</small> | ||
== MatlabBridge == | == MatlabBridge == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Commander]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Module Generator]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] extension)</small> |
== MeshToLabelMap == | == MeshToLabelMap == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]] extension)</small> |
== MultidimData == | == MultidimData == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/MultidimData|Metafile Importer]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/MultidimData|Sequence Browser]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/MultidimData|Sequences]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] extension)</small> |
== NeedleFinder == | == NeedleFinder == | ||
* [https://github.com/gpernelle/NeedleFinder Needle Finder] <small>(scripted, bundled in [https://github.com/gpernelle/NeedleFinder Needle Finder] extension)</small> | * [https://github.com/gpernelle/NeedleFinder Needle Finder] <small>(scripted, bundled in [https://github.com/gpernelle/NeedleFinder Needle Finder] extension)</small> | ||
== OpenCAD == | == OpenCAD == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/OpenCAD|Heterogeneity CAD]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] extension)</small> |
| − | * [ | + | * [[Documentation/Nightly/Extensions/OpenCAD|Segment CAD]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] extension)</small> |
== PBNRR == | == PBNRR == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] extension)</small> |
== PercutaneousApproachAnalysis == | == PercutaneousApproachAnalysis == | ||
| − | * [ | + | * [[Documentation/Nightly/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] <small>(scripted, bundled in [[Documentation/Nightly/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small> |
== PerkTutor == | == PerkTutor == | ||
* [http://www.perktutor.org/ Perk Evaluator] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> | * [http://www.perktutor.org/ Perk Evaluator] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> | ||
| Line 2,660: | Line 2,660: | ||
* [http://www.perktutor.org/ Workflow Segmentation] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> | * [http://www.perktutor.org/ Workflow Segmentation] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> | ||
== PETDICOMExtension == | == PETDICOMExtension == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PETDICOM|SUVFactor Calculator]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/PETDICOM|PETDICOMExtension]] extension)</small> |
== PkModeling == | == PkModeling == | ||
* [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] <small>(cli, bundled in [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] extension)</small> | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] <small>(cli, bundled in [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] extension)</small> | ||
== PortPlacement == | == PortPlacement == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]] extension)</small> |
== PyDevRemoteDebug == | == PyDevRemoteDebug == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] extension)</small> |
== Reporting == | == Reporting == | ||
* [[Documentation/4.2/Modules/Reporting|Label To DICOMSEGConverter]] <small>(scripted, bundled in [[Documentation/4.2/Modules/Reporting|Reporting]] extension)</small> | * [[Documentation/4.2/Modules/Reporting|Label To DICOMSEGConverter]] <small>(scripted, bundled in [[Documentation/4.2/Modules/Reporting|Reporting]] extension)</small> | ||
| Line 2,676: | Line 2,676: | ||
* [https://www.assembla.com/spaces/Scoliosis/wiki Spinal Curvature Measurement] <small>(scripted, bundled in [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis] extension)</small> | * [https://www.assembla.com/spaces/Scoliosis/wiki Spinal Curvature Measurement] <small>(scripted, bundled in [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis] extension)</small> | ||
== SegmentationAidedRegistration == | == SegmentationAidedRegistration == | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] <small>(cli, bundled in [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] extension)</small> |
== SlicerExtension-VMTK == | == SlicerExtension-VMTK == | ||
* [http://slicer.vmtk.org/ Centerline Computation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | * [http://slicer.vmtk.org/ Centerline Computation] <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small> | ||
| Line 2,718: | Line 2,718: | ||
* [http://slicerrt.org Vff File Reader] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | * [http://slicerrt.org Vff File Reader] <small>(loadable, bundled in [http://slicerrt.org Slicer RT] extension)</small> | ||
== SlicerToKiwiExporter == | == SlicerToKiwiExporter == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small> |
== SobolevSegmenter == | == SobolevSegmenter == | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/SobolevSegmenter|Sobolev Segmenter]] <small>(cli, bundled in [[Documentation/Nightly/Modules/SobolevSegmenter|Sobolev Segmenter]] extension)</small> |
== SwissSkullStripper == | == SwissSkullStripper == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]] <small>(cli, bundled in [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]] extension)</small> |
== TCIABrowser == | == TCIABrowser == | ||
* [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] extension)</small> | * [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] extension)</small> | ||
== ThingiverseBrowser == | == ThingiverseBrowser == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/ThingiverseBrowser|Thingiverse Browser]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/ThingiverseBrowser|Thingiverse Browser]] extension)</small> |
== TrackerStabilizer == | == TrackerStabilizer == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] <small>(loadable, bundled in [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small> |
== UKFTractography == | == UKFTractography == | ||
* [http://www.nitrc.org/projects/ukftractography/ Convert VTK] <small>(cli, bundled in [http://www.nitrc.org/projects/ukftractography/ UKFTractography] extension)</small> | * [http://www.nitrc.org/projects/ukftractography/ Convert VTK] <small>(cli, bundled in [http://www.nitrc.org/projects/ukftractography/ UKFTractography] extension)</small> | ||
* [http://www.nitrc.org/projects/ukftractography/ UKFTractography] <small>(cli, bundled in [http://www.nitrc.org/projects/ukftractography/ UKFTractography] extension)</small> | * [http://www.nitrc.org/projects/ukftractography/ UKFTractography] <small>(cli, bundled in [http://www.nitrc.org/projects/ukftractography/ UKFTractography] extension)</small> | ||
== VolumeClip == | == VolumeClip == | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/VolumeClip|Volume Clip With Model]] <small>(scripted, bundled in [[Documentation/4.3/Extensions/VolumeClip|Volume Clip]] extension)</small> |
| − | * [ | + | * [[Documentation/4.3/Extensions/VolumeClip|Volume Clip With Roi]] <small>(scripted, bundled in [[Documentation/4.3/Extensions/VolumeClip|Volume Clip]] extension)</small> |
== WindowLevelEffect == | == WindowLevelEffect == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small> |
== XNATSlicer == | == XNATSlicer == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/XNATSlicer|Xnat Slicer]] <small>(scripted, bundled in [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] extension)</small> |
= Extensions by name = | = Extensions by name = | ||
54 extensions: | 54 extensions: | ||
* [http://www.nitrc.org/projects/abc ABC] | * [http://www.nitrc.org/projects/abc ABC] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/AirwaySegmentation|Airway Segmentation]] |
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] | * [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] | ||
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] | * [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] | ||
* [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|Carrera Slice]] | * [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|Carrera Slice]] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] |
* [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] | * [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CleaverExtension|Cleaver Extension]] |
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|CMFreg]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/DiceComputation|Dice Computation]] |
* [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] | * [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Dilate Label]] |
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | ||
* [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] | * [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|IASEM]] |
* [https://github.com/gpernelle/iGyne i Gyne] | * [https://github.com/gpernelle/iGyne i Gyne] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/ImageMaker|Image Maker]] |
* [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] | * [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] |
* [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] | * [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] |
* [https://github.com/gpernelle/NeedleFinder Needle Finder] | * [https://github.com/gpernelle/NeedleFinder Needle Finder] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] |
| − | * [ | + | * [[Documentation/Nightly/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] |
* [http://www.perktutor.org/ Perk Tutor] | * [http://www.perktutor.org/ Perk Tutor] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PETDICOM|PETDICOMExtension]] |
* [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] |
* [[Documentation/4.2/Modules/Reporting|Reporting]] | * [[Documentation/4.2/Modules/Reporting|Reporting]] | ||
* [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/ResectionPlanner Resection Planner] | * [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/ResectionPlanner Resection Planner] | ||
* [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis] | * [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis] | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] |
* [http://slicer.vmtk.org/ VMTK] | * [http://slicer.vmtk.org/ VMTK] | ||
* [http://www.slicerigt.org Slicer IGT] | * [http://www.slicerigt.org Slicer IGT] | ||
* [http://slicerrt.org Slicer RT] | * [http://slicerrt.org Slicer RT] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] |
| − | * [ | + | * [[Documentation/Nightly/Modules/SobolevSegmenter|Sobolev Segmenter]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]] |
* [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] | * [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/ThingiverseBrowser|Thingiverse Browser]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] |
* [http://www.nitrc.org/projects/ukftractography/ UKFTractography] | * [http://www.nitrc.org/projects/ukftractography/ UKFTractography] | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/VolumeClip|Volume Clip]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] |
= Extensions by category = | = Extensions by category = | ||
25 categories: | 25 categories: | ||
| Line 2,828: | Line 2,828: | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] | * [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] | ||
== Converters == | == Converters == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PETDICOM|PETDICOMExtension]] |
== Developer Tools == | == Developer Tools == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/ImageMaker|Image Maker]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] |
== Diffusion == | == Diffusion == | ||
* [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] | * [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] | ||
== Editor Effects == | == Editor Effects == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] |
== Exporter == | == Exporter == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] |
== Filtering == | == Filtering == | ||
=== Morphology === | === Morphology === | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Dilate Label]] |
== IGT == | == IGT == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] |
| − | * [ | + | * [[Documentation/Nightly/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] |
* [https://github.com/gpernelle/NeedleFinder Needle Finder] | * [https://github.com/gpernelle/NeedleFinder Needle Finder] | ||
* [http://www.slicerigt.org Slicer IGT] | * [http://www.slicerigt.org Slicer IGT] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] |
* [https://github.com/gpernelle/iGyne i Gyne] | * [https://github.com/gpernelle/iGyne i Gyne] | ||
* [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/ResectionPlanner Resection Planner] | * [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/ResectionPlanner Resection Planner] | ||
== Informatics == | == Informatics == | ||
* [[Documentation/4.2/Modules/Reporting|Reporting]] | * [[Documentation/4.2/Modules/Reporting|Reporting]] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] |
* [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] | * [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]] |
== Mesh Generation == | == Mesh Generation == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] |
| − | * [ | + | * [[Documentation/4.3/Extensions/CleaverExtension|Cleaver Extension]] |
== Microscopy == | == Microscopy == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|IASEM]] |
== Multidimensional data == | == Multidimensional data == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] |
== Quantification == | == Quantification == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/DiceComputation|Dice Computation]] |
* [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] | ||
== Radiotherapy == | == Radiotherapy == | ||
* [http://slicerrt.org Slicer RT] | * [http://slicerrt.org Slicer RT] | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis]] |
== Registration == | == Registration == | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|CMFreg]] |
| − | * [ | + | * [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] |
== Remote == | == Remote == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] |
== Scoliosis == | == Scoliosis == | ||
* [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis] | * [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis] | ||
== Segmentation == | == Segmentation == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/AirwaySegmentation|Airway Segmentation]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]] |
* [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|Carrera Slice]] | * [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|Carrera Slice]] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] |
* [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] | * [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] | ||
* [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] | * [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] | ||
* [http://www.nitrc.org/projects/abc ABC] | * [http://www.nitrc.org/projects/abc ABC] | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/SobolevSegmenter|Sobolev Segmenter]] |
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/VolumeClip|Volume Clip]] |
== Shape Analysis == | == Shape Analysis == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]] |
== Tractography == | == Tractography == | ||
* [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] | * [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] | ||
| Line 2,898: | Line 2,898: | ||
* [http://www.perktutor.org/ Perk Tutor] | * [http://www.perktutor.org/ Perk Tutor] | ||
== Utilities == | == Utilities == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/ThingiverseBrowser|Thingiverse Browser]] |
== Vascular Modeling Toolkit == | == Vascular Modeling Toolkit == | ||
* [http://slicer.vmtk.org/ VMTK] | * [http://slicer.vmtk.org/ VMTK] | ||
| Line 2,958: | Line 2,958: | ||
* [[#yogesh.40bwh.harvard.edu|yogesh@bwh.harvard.edu]] | * [[#yogesh.40bwh.harvard.edu|yogesh@bwh.harvard.edu]] | ||
== Asclepios INRIA) and Nikos Chrisochoides (CRTC == | == Asclepios INRIA) and Nikos Chrisochoides (CRTC == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] |
== Boston Childrens Hospital == | == Boston Childrens Hospital == | ||
* [http://slicer.vmtk.org/ VMTK] | * [http://slicer.vmtk.org/ VMTK] | ||
== Brigham and Women's Hospital == | == Brigham and Women's Hospital == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Dilate Label]] |
* [http://www.slicerigt.org Slicer IGT] | * [http://www.slicerigt.org Slicer IGT] | ||
== BWH == | == BWH == | ||
* [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] | * [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/DiceComputation|Dice Computation]] |
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] |
* [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] |
== BWH & MGH == | == BWH & MGH == | ||
* [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|Carrera Slice]] | * [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|Carrera Slice]] | ||
== BWH, SPL == | == BWH, SPL == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PETDICOM|PETDICOMExtension]] |
== BWH/UAB == | == BWH/UAB == | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] |
== CARMA == | == CARMA == | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] | * [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] | ||
== College of Information Engineering, Zhejiang University of Technology, Hangzhou, China == | == College of Information Engineering, Zhejiang University of Technology, Hangzhou, China == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] |
== Crisalix == | == Crisalix == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]] |
== CRTC == | == CRTC == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] |
== Department of Neurosurgery, PLA General Hospital, Beijing, China == | == Department of Neurosurgery, PLA General Hospital, Beijing, China == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] |
== Department of Orthodontics, UNC == | == Department of Orthodontics, UNC == | ||
* [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] | * [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] | ||
| Line 3,002: | Line 3,002: | ||
* [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] | * [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] | ||
* [http://slicer.vmtk.org/ VMTK] | * [http://slicer.vmtk.org/ VMTK] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] |
== Kitware == | == Kitware == | ||
* [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] | * [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/ImageMaker|Image Maker]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]] |
* [http://slicer.vmtk.org/ VMTK] | * [http://slicer.vmtk.org/ VMTK] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] |
== Massachusetts General Hospital == | == Massachusetts General Hospital == | ||
* [http://slicerrt.org Slicer RT] | * [http://slicerrt.org Slicer RT] | ||
== Moka Creative LLC, Washington University in St. Louis == | == Moka Creative LLC, Washington University in St. Louis == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] |
== NIRAL, UNC == | == NIRAL, UNC == | ||
* [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] | * [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] | ||
== Noware == | == Noware == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]] |
== Orobix == | == Orobix == | ||
* [http://slicer.vmtk.org/ VMTK] | * [http://slicer.vmtk.org/ VMTK] | ||
== PerkLab at Queen's University == | == PerkLab at Queen's University == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] |
== PerkLab, Queen's == | == PerkLab, Queen's == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] |
== PerkLab, Queen's University == | == PerkLab, Queen's University == | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] |
* [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis] | * [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis] | ||
* [http://slicerrt.org Slicer RT] | * [http://slicerrt.org Slicer RT] | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/VolumeClip|Volume Clip]] |
== PMH == | == PMH == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] |
== Queen's University == | == Queen's University == | ||
* [http://www.perktutor.org/ Perk Tutor] | * [http://www.perktutor.org/ Perk Tutor] | ||
| Line 3,038: | Line 3,038: | ||
* [http://www.slicerigt.org Slicer IGT] | * [http://www.slicerigt.org Slicer IGT] | ||
== Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto == | == Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] |
* [http://slicerrt.org Slicer RT] | * [http://slicerrt.org Slicer RT] | ||
== SBU == | == SBU == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] |
== SCI Institute == | == SCI Institute == | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CleaverExtension|Cleaver Extension]] |
== Shiga University of Medical Science, Japan == | == Shiga University of Medical Science, Japan == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] |
== Shiga University of Medical Science, Japan, SPL == | == Shiga University of Medical Science, Japan, SPL == | ||
| − | * [ | + | * [[Documentation/Nightly/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] |
== SPL == | == SPL == | ||
* [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] | * [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] | ||
| − | * [ | + | * [[Documentation/Nightly/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] |
* [[Documentation/4.2/Modules/Reporting|Reporting]] | * [[Documentation/4.2/Modules/Reporting|Reporting]] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] |
== SPL and BWH == | == SPL and BWH == | ||
* [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] | * [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] | ||
== SPL B&W Harvard == | == SPL B&W Harvard == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] |
== SRI == | == SRI == | ||
* [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] | ||
| Line 3,063: | Line 3,063: | ||
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | ||
== Surgical Planning Lab == | == Surgical Planning Lab == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] |
== UAB == | == UAB == | ||
* [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|Carrera Slice]] | * [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|Carrera Slice]] | ||
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] |
| − | * [ | + | * [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] |
| − | * [ | + | * [[Documentation/Nightly/Modules/SobolevSegmenter|Sobolev Segmenter]] |
== UIowa == | == UIowa == | ||
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] | * [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] | ||
== UNC == | == UNC == | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|CMFreg]] |
* [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] | * [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] | ||
* [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] | * [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]] |
== Univ of Michigan == | == Univ of Michigan == | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|CMFreg]] |
== University College Cork == | == University College Cork == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/AirwaySegmentation|Airway Segmentation]] |
== University of Bern == | == University of Bern == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]] |
== University of Heidelberg == | == University of Heidelberg == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] |
== University of Iowa == | == University of Iowa == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PETDICOM|PETDICOMExtension]] |
== University of Utah == | == University of Utah == | ||
* [http://www.nitrc.org/projects/abc ABC] | * [http://www.nitrc.org/projects/abc ABC] | ||
== Utah == | == Utah == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] |
| − | * [ | + | * [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] |
== UWA == | == UWA == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/ThingiverseBrowser|Thingiverse Browser]] |
== Washington University in St. Louis == | == Washington University in St. Louis == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] |
== yogesh@bwh.harvard.edu == | == yogesh@bwh.harvard.edu == | ||
* [http://www.nitrc.org/projects/ukftractography/ UKFTractography] | * [http://www.nitrc.org/projects/ukftractography/ UKFTractography] | ||
| Line 3,222: | Line 3,222: | ||
== Alan Morris == | == Alan Morris == | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] | * [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] |
| − | * [ | + | * [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] |
== Alex Yarmarkovich == | == Alex Yarmarkovich == | ||
* [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] | * [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] | ||
| Line 3,233: | Line 3,233: | ||
* [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|Carrera Slice]] | * [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|Carrera Slice]] | ||
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] |
| − | * [ | + | * [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] |
| − | * [ | + | * [[Documentation/Nightly/Modules/SobolevSegmenter|Sobolev Segmenter]] |
== Andinet Enquobahrie == | == Andinet Enquobahrie == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]] |
== Andras Lasso == | == Andras Lasso == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] |
* [http://slicerrt.org Slicer RT] | * [http://slicerrt.org Slicer RT] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] |
| − | * [ | + | * [[Documentation/4.3/Extensions/VolumeClip|Volume Clip]] |
== Andre Mastmeyer == | == Andre Mastmeyer == | ||
* [https://github.com/gpernelle/NeedleFinder Needle Finder] | * [https://github.com/gpernelle/NeedleFinder Needle Finder] | ||
== Andrey Fedorov == | == Andrey Fedorov == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] |
* [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] | * [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/PETDICOM|PETDICOMExtension]] |
* [[Documentation/4.2/Modules/Reporting|Reporting]] | * [[Documentation/4.2/Modules/Reporting|Reporting]] | ||
* [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] | * [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] |
== Andriy Fedorov == | == Andriy Fedorov == | ||
* [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] | ||
== Andriy Kot == | == Andriy Kot == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] |
== Antonio Damato == | == Antonio Damato == | ||
* [https://github.com/gpernelle/iGyne i Gyne] | * [https://github.com/gpernelle/iGyne i Gyne] | ||
| Line 3,266: | Line 3,266: | ||
* [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] | * [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] | ||
== Arie Nakhmani == | == Arie Nakhmani == | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/SobolevSegmenter|Sobolev Segmenter]] |
== Arnaud Gelas == | == Arnaud Gelas == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]] |
== Atsushi Yamada == | == Atsushi Yamada == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CornerAnnotation|Corner Annotation]] |
== Beatriz Paniagua == | == Beatriz Paniagua == | ||
* [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] | * [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] | ||
== Bill Lorensen == | == Bill Lorensen == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]] |
== Bradley Lowekamp == | == Bradley Lowekamp == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/IASEM|IASEM]] |
== Brig Bagley == | == Brig Bagley == | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CleaverExtension|Cleaver Extension]] |
== Carl-Fredrik Westin == | == Carl-Fredrik Westin == | ||
* [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] | * [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] | ||
| Line 3,285: | Line 3,285: | ||
* [http://www.nitrc.org/projects/ukftractography/ UKFTractography] | * [http://www.nitrc.org/projects/ukftractography/ UKFTractography] | ||
== Csaba Pinter == | == Csaba Pinter == | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis]] |
* [http://slicerrt.org Slicer RT] | * [http://slicerrt.org Slicer RT] | ||
== Dan Marcus == | == Dan Marcus == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] |
== Daniel Haehn == | == Daniel Haehn == | ||
* [http://slicer.vmtk.org/ VMTK] | * [http://slicer.vmtk.org/ VMTK] | ||
== Danny Perry == | == Danny Perry == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] |
| − | * [ | + | * [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] |
== Demian Wasssermann == | == Demian Wasssermann == | ||
* [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] | * [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] | ||
| Line 3,299: | Line 3,299: | ||
* [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] | * [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] | ||
== Ethan Ulrich == | == Ethan Ulrich == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PETDICOM|PETDICOMExtension]] |
== Eugene Kholmovski == | == Eugene Kholmovski == | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] | * [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] | ||
== Fotis Drakopoulos == | == Fotis Drakopoulos == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] |
== Francois Budin == | == Francois Budin == | ||
* [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] | * [http://www.nitrc.org/projects/dti_tract_stat DTIAtlas Fiber Analyzer] | ||
* [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] | * [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/MeshToLabelMap|Mesh To Label Map]] |
== Franklin King == | == Franklin King == | ||
* [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis] | * [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis] | ||
== Greg Gardner == | == Greg Gardner == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] |
| − | * [ | + | * [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] |
== Greg Sharp == | == Greg Sharp == | ||
* [http://slicerrt.org Slicer RT] | * [http://slicerrt.org Slicer RT] | ||
| Line 3,331: | Line 3,331: | ||
* [https://github.com/gpernelle/NeedleFinder Needle Finder] | * [https://github.com/gpernelle/NeedleFinder Needle Finder] | ||
== Jayender Jagadeesan == | == Jayender Jagadeesan == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] |
== Jean-Christophe Fillion-Robin == | == Jean-Christophe Fillion-Robin == | ||
* [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] | * [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] |
* [http://slicer.vmtk.org/ VMTK] | * [http://slicer.vmtk.org/ VMTK] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] |
== Jennifer Andrea == | == Jennifer Andrea == | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis]] |
== Jessica Forbes == | == Jessica Forbes == | ||
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] | * [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] | ||
== Jiashu Zhang == | == Jiashu Zhang == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] |
== Jim Miller == | == Jim Miller == | ||
* [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] | * [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] | ||
* [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] | ||
== Jonathan Bronson == | == Jonathan Bronson == | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CleaverExtension|Cleaver Extension]] |
== Josh Cates == | == Josh Cates == | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] | * [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] |
| − | * [ | + | * [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] |
== Julien Finet == | == Julien Finet == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/ImageMaker|Image Maker]] |
== Junichi Tokuda == | == Junichi Tokuda == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CurveMaker|Curve Maker]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/ErodeDilateLabel|Erode Dilate Label]] |
| − | * [ | + | * [[Documentation/Nightly/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] |
* [http://www.slicerigt.org Slicer IGT] | * [http://www.slicerigt.org Slicer IGT] | ||
== Karl Fritscher == | == Karl Fritscher == | ||
| Line 3,365: | Line 3,365: | ||
* [http://www.nitrc.org/projects/ukftractography/ UKFTractography] | * [http://www.nitrc.org/projects/ukftractography/ UKFTractography] | ||
== Kevin Wang == | == Kevin Wang == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/MatlabBridge|Matlab Bridge]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] |
* [http://slicerrt.org Slicer RT] | * [http://slicerrt.org Slicer RT] | ||
== Kilian Pohl == | == Kilian Pohl == | ||
* [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] | * [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] | ||
== Koichiro Murakami == | == Koichiro Murakami == | ||
| − | * [ | + | * [[Documentation/Nightly/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] |
== Lauren Barber == | == Lauren Barber == | ||
* [https://github.com/gpernelle/iGyne i Gyne] | * [https://github.com/gpernelle/iGyne i Gyne] | ||
* [https://github.com/gpernelle/NeedleFinder Needle Finder] | * [https://github.com/gpernelle/NeedleFinder Needle Finder] | ||
== Laurent Chauvin == | == Laurent Chauvin == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/DiceComputation|Dice Computation]] |
| − | * [ | + | * [[Documentation/Nightly/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/TrackerStabilizer|Tracker Stabilizer]] |
== Liang-Jia Zhu == | == Liang-Jia Zhu == | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] |
== Liangjia Zhu == | == Liangjia Zhu == | ||
* [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|Carrera Slice]] | * [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|Carrera Slice]] | ||
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] |
== Luca Antiga == | == Luca Antiga == | ||
* [http://slicer.vmtk.org/ VMTK] | * [http://slicer.vmtk.org/ VMTK] | ||
== Luis G. Torres == | == Luis G. Torres == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PortPlacement|Port Placement]] |
== Luping Fang == | == Luping Fang == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] |
== Mahnaz Maddah == | == Mahnaz Maddah == | ||
* [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] | ||
== Manson Winsauer == | == Manson Winsauer == | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|CMFreg]] |
== Marcel Prastawa == | == Marcel Prastawa == | ||
* [http://www.nitrc.org/projects/abc ABC] | * [http://www.nitrc.org/projects/abc ABC] | ||
| Line 3,401: | Line 3,401: | ||
== Matt Lougheed == | == Matt Lougheed == | ||
* [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/ResectionPlanner Resection Planner] | * [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/ResectionPlanner Resection Planner] | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/VolumeClip|Volume Clip]] |
== Mattea Welch == | == Mattea Welch == | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/GelDosimetry|Gel Dosimetry Analysis]] |
== Matthew Holden == | == Matthew Holden == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/MultidimData|Multidim Data]] |
== Matthew S. Holden == | == Matthew S. Holden == | ||
* [http://www.perktutor.org/ Perk Tutor] | * [http://www.perktutor.org/ Perk Tutor] | ||
== Mauricio Reyes == | == Mauricio Reyes == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]] |
== Ming-ching Chang == | == Ming-ching Chang == | ||
* [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] | ||
| Line 3,420: | Line 3,420: | ||
* [[Documentation/4.2/Modules/Reporting|Reporting]] | * [[Documentation/4.2/Modules/Reporting|Reporting]] | ||
== Nigel Goh == | == Nigel Goh == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/ThingiverseBrowser|Thingiverse Browser]] |
== Nikos Chrisochoides == | == Nikos Chrisochoides == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] |
== Olivier Clatz == | == Olivier Clatz == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] |
== Pat Marion == | == Pat Marion == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] |
== Patricio Vela == | == Patricio Vela == | ||
* [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|Carrera Slice]] | * [[Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter|Carrera Slice]] | ||
== Paul Mercea == | == Paul Mercea == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LongitudinalPETCT|Longitudinal PETCT]] |
== Pengdong Xiao == | == Pengdong Xiao == | ||
* [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] | * [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] | ||
| Line 3,441: | Line 3,441: | ||
* [http://www.nitrc.org/projects/ukftractography/ UKFTractography] | * [http://www.nitrc.org/projects/ukftractography/ UKFTractography] | ||
== Pietro Nardelli == | == Pietro Nardelli == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/AirwaySegmentation|Airway Segmentation]] |
== Qing Pan == | == Qing Pan == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] |
== Rick Herrick == | == Rick Herrick == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] |
== Rob MacLeod == | == Rob MacLeod == | ||
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] | * [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] |
| − | * [ | + | * [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] |
== Ron Kikinis == | == Ron Kikinis == | ||
* [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] | * [[Documentation/Nightly/Extensions/ChangeTracker|Change Tracker]] | ||
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | ||
== Ruifeng Chen == | == Ruifeng Chen == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] |
== Ryan Eckbo == | == Ryan Eckbo == | ||
* [http://www.nitrc.org/projects/ukftractography/ UKFTractography] | * [http://www.nitrc.org/projects/ukftractography/ UKFTractography] | ||
| Line 3,466: | Line 3,466: | ||
* [https://github.com/gpernelle/NeedleFinder Needle Finder] | * [https://github.com/gpernelle/NeedleFinder Needle Finder] | ||
== Stefan Bauer == | == Stefan Bauer == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]] |
== Stefan Lienhard == | == Stefan Lienhard == | ||
* [http://www.nitrc.org/projects/ukftractography/ UKFTractography] | * [http://www.nitrc.org/projects/ukftractography/ UKFTractography] | ||
| Line 3,473: | Line 3,473: | ||
* [[Documentation/4.2/Modules/Reporting|Reporting]] | * [[Documentation/4.2/Modules/Reporting|Reporting]] | ||
* [http://slicer.vmtk.org/ VMTK] | * [http://slicer.vmtk.org/ VMTK] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/WindowLevelEffect|Window Level Effect]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] |
== Sunil Kumar == | == Sunil Kumar == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/XNATSlicer|XNATSlicer]] |
== Sylvain Bouix == | == Sylvain Bouix == | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] |
== Tamas Ungi == | == Tamas Ungi == | ||
* [http://www.perktutor.org/ Perk Tutor] | * [http://www.perktutor.org/ Perk Tutor] | ||
| Line 3,485: | Line 3,485: | ||
* [http://www.slicerigt.org Slicer IGT] | * [http://www.slicerigt.org Slicer IGT] | ||
== Thomas Fejes == | == Thomas Fejes == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/SwissSkullStripper|Swiss Skull Stripper]] |
== Tina Kapur == | == Tina Kapur == | ||
* [https://github.com/gpernelle/iGyne i Gyne] | * [https://github.com/gpernelle/iGyne i Gyne] | ||
| Line 3,493: | Line 3,493: | ||
* [https://github.com/gpernelle/NeedleFinder Needle Finder] | * [https://github.com/gpernelle/NeedleFinder Needle Finder] | ||
== Vinicius Boen == | == Vinicius Boen == | ||
| − | * [ | + | * [[Documentation/4.3/Extensions/CMFreg|CMFreg]] |
== Vivek Narayan == | == Vivek Narayan == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/OpenCAD|Open CAD]] |
== Xiaofeng Liu == | == Xiaofeng Liu == | ||
* [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] | * [[Documentation/Nightly/Extensions/MABMIS|MABMIS]] | ||
| Line 3,502: | Line 3,502: | ||
* [https://github.com/gpernelle/NeedleFinder Needle Finder] | * [https://github.com/gpernelle/NeedleFinder Needle Finder] | ||
== Xiaolei Chen == | == Xiaolei Chen == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/GyroGuide|Gyro Guide]] |
== y Wells == | == y Wells == | ||
* [https://github.com/gpernelle/iGyne i Gyne] | * [https://github.com/gpernelle/iGyne i Gyne] | ||
| Line 3,510: | Line 3,510: | ||
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | ||
* [https://github.com/gpernelle/iGyne i Gyne] | * [https://github.com/gpernelle/iGyne i Gyne] | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/LAScarSegmenter|LAScar Segmenter]] |
* [https://github.com/gpernelle/NeedleFinder Needle Finder] | * [https://github.com/gpernelle/NeedleFinder Needle Finder] | ||
| − | * [ | + | * [[Documentation/Nightly/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]] |
== Yingxuan Zhu == | == Yingxuan Zhu == | ||
* [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] | ||
| Line 3,518: | Line 3,518: | ||
* [http://www.nitrc.org/projects/ukftractography/ UKFTractography] | * [http://www.nitrc.org/projects/ukftractography/ UKFTractography] | ||
== Yixun Liu == | == Yixun Liu == | ||
| − | * [ | + | * [[Documentation/Nightly/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] |
| − | * [ | + | * [[Documentation/Nightly/Extensions/PBNRR|PBNRR]] |
== Yogesh Rathi == | == Yogesh Rathi == | ||
* [http://www.nitrc.org/projects/ukftractography/ UKFTractography] | * [http://www.nitrc.org/projects/ukftractography/ UKFTractography] | ||
== Yundi Shi == | == Yundi Shi == | ||
* [http://www.nitrc.org/projects/ukftractography/ UKFTractography] | * [http://www.nitrc.org/projects/ukftractography/ UKFTractography] | ||
Revision as of 02:36, 27 November 2019
- Modules by name
- Modules by category
- Modules by contributing organization
- Modules by contributing individual
- Modules by type
- Modules by extension
- Extensions by name
- Extensions by category
- Extensions by contributing organization
- Extensions by contributing individual
List of extensions known to be broken
Modules by name
215 modules:
- ABC (cli, bundled in ABC extension)
- ACPCTransform (cli, built-in)
- Add Scalar Volumes (cli, built-in)
- Airway Segmentation CLI (cli, bundled in Airway Segmentation extension)
- Annotations (loadable, built-in)
- Apply Matrix (cli, bundled in CMFreg extension)
- Beams (loadable, bundled in Slicer RT extension)
- Bin Shrink (cli, bundled in IASEM extension)
- Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
- BRAINSDemon Warp (cli, built-in)
- BRAINSDWICleanup (cli, built-in)
- BRAINSFit (cli, built-in)
- BRAINSLabel Stats (cli, built-in)
- BRAINSResample (cli, built-in)
- BRAINSResize (cli, built-in)
- BRAINSROIAuto (cli, built-in)
- BRAINSStrip Rotation (cli, built-in)
- BRAINSTransform Convert (cli, built-in)
- Breach Warning (loadable, bundled in Slicer IGT extension)
- Carrera Slice (loadable, bundled in Carrera Slice extension)
- Cast Scalar Volume (cli, built-in)
- Centerline Computation (scripted, bundled in VMTK extension)
- Change Tracker (scripted, bundled in Change Tracker extension)
- Checker Board Filter (cli, built-in)
- Cleaver CLI (cli, bundled in Cleaver Extension extension)
- CMRToolkit Automatic Left Atrial Scar (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
- Collect Fiducials (loadable, bundled in Slicer IGT extension)
- Colors (loadable, built-in)
- Compare Volumes (scripted, bundled in CMFreg extension)
- Contour Comparison (loadable, bundled in Slicer RT extension)
- Contour Morphology (loadable, bundled in Slicer RT extension)
- Contours (loadable, bundled in Slicer RT extension)
- Convert VTK (cli, bundled in UKFTractography extension)
- Corner Annotation (scripted, bundled in Corner Annotation extension)
- Create DICOMSeries (cli, built-in)
- Create Models (loadable, bundled in Slicer IGT extension)
- Crop Volume (loadable, built-in)
- Curvature Anisotropic Diffusion (cli, built-in)
- Curve Maker (scripted, bundled in Curve Maker extension)
- Data (loadable, built-in)
- Data Probe (scripted, built-in)
- Data Store (loadable, built-in)
- Dice Computation (loadable, bundled in Dice Computation extension)
- DICOM (scripted, built-in)
- DICOM2Full Brain Tractography (scripted, built-in)
- Dicom Rt Export (loadable, bundled in Slicer RT extension)
- Dicom Rt Import (loadable, bundled in Slicer RT extension)
- Dicom Sro Export (scripted, bundled in Slicer RT extension)
- Dicom Sro Import (loadable, bundled in Slicer RT extension)
- Diffusion Tensor Scalar Measurements (cli, built-in)
- Diffusion Weighted Volume Masking (cli, built-in)
- Dilate Label (cli, bundled in Erode Dilate Label extension)
- Dose Accumulation (loadable, bundled in Slicer RT extension)
- Dose Comparison (loadable, bundled in Slicer RT extension)
- Dose Volume Histogram (loadable, bundled in Slicer RT extension)
- Downsize (cli, bundled in CMFreg extension)
- DTIAtlas Fiber Analyzer (cli, bundled in DTIAtlas Fiber Analyzer extension)
- dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Dvh Comparison (scripted, bundled in Slicer RT extension)
- DWIConvert (cli, built-in)
- DWIJoint Rician LMMSEFilter (cli, built-in)
- DWIRician LMMSEFilter (cli, built-in)
- DWITo DTIEstimation (cli, built-in)
- EMSegment (loadable, built-in)
- EMSegment Command Line (cli, built-in)
- EMSegment Quick (loadable, built-in)
- EMSegment Transform To New Format (cli, built-in)
- Endoscopy (scripted, built-in)
- Erode Label (cli, bundled in Erode Dilate Label extension)
- Extract Skeleton (cli, built-in)
- Fast Grow Cut (loadable, bundled in Fast Grow Cut Effect extension)
- Fast Grow Cut Segmenter (loadable, bundled in Carrera Slice extension)
- Fiber Bundle Label Select (cli, built-in)
- Fiber Bundle To Label Map (scripted, built-in)
- Fiber Compare (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Fiducial Registration (cli, built-in)
- Fiducial Registration Wizard (loadable, bundled in Slicer IGT extension)
- Fiducials To Model Registration (scripted, bundled in Slicer IGT extension)
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
- Gaussian Blur Image Filter (cli, built-in)
- Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)
- Gel Dosimetry Analysis Algo (loadable, bundled in Gel Dosimetry Analysis extension)
- Gradient Anisotropic Diffusion (cli, built-in)
- Grayscale Fill Hole Image Filter (cli, built-in)
- Grayscale Grind Peak Image Filter (cli, built-in)
- Grayscale Model Maker (cli, built-in)
- Growing (cli, bundled in CMFreg extension)
- Gyro Guide (scripted, bundled in Gyro Guide extension)
- Heterogeneity CAD (scripted, bundled in Open CAD extension)
- Histogram Matching (cli, built-in)
- IASEMImport (cli, bundled in IASEM extension)
- IASEMImport Series (cli, bundled in IASEM extension)
- IGR3D MABMIS Testing (cli, bundled in MABMIS extension)
- IGR3D MABMIS Training (cli, bundled in MABMIS extension)
- i Gyne (scripted, bundled in i Gyne extension)
- Image Label Combine (cli, built-in)
- Intensity Difference Metric (cli, bundled in Change Tracker extension)
- Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
- Isodose (loadable, bundled in Slicer RT extension)
- KUtil (scripted, bundled in Carrera Slice extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Label Map Smoothing (cli, built-in)
- Label Object Statistics (scripted, bundled in IASEM extension)
- Label To DICOMSEGConverter (scripted, bundled in Reporting extension)
- Landmark Registration (scripted, bundled in CMFreg extension)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
- Level Set Segmentation (scripted, bundled in VMTK extension)
- Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)
- Markups (loadable, built-in)
- Mask Creation (cli, bundled in CMFreg extension)
- Mask Scalar Volume (cli, built-in)
- Median Image Filter (cli, built-in)
- Merge Models (cli, built-in)
- Merge Stat With Fiber (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
- Mesh To Label Map (cli, bundled in Mesh To Label Map extension)
- Metafile Importer (loadable, bundled in Multidim Data extension)
- Model Maker (cli, built-in)
- Models (loadable, built-in)
- Model To Label Map (cli, built-in)
- Multiply Scalar Volumes (cli, built-in)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- N4ITKBias Field Correction (cli, built-in)
- Needle Finder (scripted, bundled in Needle Finder extension)
- Non Growing (cli, bundled in CMFreg extension)
- Open IGTLink IF (loadable, built-in)
- Open IGTLink Remote (loadable, bundled in Slicer IGT extension)
- Orient Scalar Volume (cli, built-in)
- Path Explorer (loadable, bundled in Slicer IGT extension)
- PBNRR (cli, bundled in PBNRR extension)
- Percutaneous Approach Analysis (scripted, bundled in Percutaneous Approach Analysis extension)
- Perform Metric Test (cli, built-in)
- Perk Evaluator (loadable, bundled in Perk Tutor extension)
- PETStandard Uptake Value Computation (cli, built-in)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- Pivot Calibration (loadable, bundled in Slicer IGT extension)
- Pk Modeling (cli, bundled in Pk Modeling extension)
- Planar Image (loadable, bundled in Slicer RT extension)
- plastimatch slicer bspline (cli, bundled in Slicer RT extension)
- plastimatch slicer dicomrt export (cli, bundled in Slicer RT extension)
- plastimatch slicer dicomrt import (cli, bundled in Slicer RT extension)
- plastimatch slicer landwarp (cli, bundled in Slicer RT extension)
- plastimatch slicer xformwarp (cli, bundled in Slicer RT extension)
- Plastimatch Py (loadable, bundled in Slicer RT extension)
- Plm Register (scripted, bundled in Slicer RT extension)
- Plus Remote (scripted, bundled in Slicer IGT extension)
- Port Placement (scripted, bundled in Port Placement extension)
- Probe Volume With Model (cli, built-in)
- Python Metrics Calculator (scripted, bundled in Perk Tutor extension)
- Reformat (loadable, built-in)
- Reporting (loadable, bundled in Reporting extension)
- Resample DTIVolume (cli, built-in)
- Resample Scalar Vector DWIVolume (cli, built-in)
- Resection Volume (scripted, bundled in Resection Planner extension)
- Robust Statistics Segmenter (cli, built-in)
- Sample Data (scripted, built-in)
- Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)
- Scene Views (loadable, built-in)
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
- Segment CAD (scripted, bundled in Open CAD extension)
- Sequence Browser (loadable, bundled in Multidim Data extension)
- Sequences (loadable, bundled in Multidim Data extension)
- Simple Filters (scripted, built-in)
- Simple Region Growing Segmentation (cli, built-in)
- Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
- Sobolev Segmenter (cli, bundled in Sobolev Segmenter extension)
- Spacing Aware Curvature Diffusion (cli, bundled in IASEM extension)
- Spinal Curvature Measurement (scripted, bundled in Scoliosis extension)
- Subject Hierarchy (loadable, built-in)
- Subtract Scalar Volumes (cli, built-in)
- Surface Registration (scripted, bundled in CMFreg extension)
- Surface Toolbox (scripted, built-in)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
- Swiss Skull Stripper (cli, bundled in Swiss Skull Stripper extension)
- TCIABrowser (scripted, bundled in TCIABrowser extension)
- Thingiverse Browser (scripted, bundled in Thingiverse Browser extension)
- Threshold Scalar Volume (cli, built-in)
- Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)
- Tractography Display (loadable, built-in)
- Tractography Interactive Seeding (loadable, built-in)
- Tractography Label Map Seeding (cli, built-in)
- Transform Fusion (loadable, bundled in Slicer IGT extension)
- Transform Recorder (loadable, bundled in Perk Tutor extension)
- Transforms (loadable, built-in)
- UKFTractography (cli, bundled in UKFTractography extension)
- Ultrasound Snapshots (loadable, bundled in Slicer IGT extension)
- Units (loadable, built-in)
- VBRAINSDemon Warp (cli, built-in)
- Vector To Scalar Volume (scripted, built-in)
- Vesselness Filtering (scripted, bundled in VMTK extension)
- Vff File Reader (loadable, bundled in Slicer RT extension)
- View Controllers (loadable, built-in)
- Volume Clip With Model (scripted, bundled in Volume Clip extension)
- Volume Clip With Roi (scripted, bundled in Volume Clip extension)
- Volume Rendering (loadable, built-in)
- Volume Reslice Driver (loadable, bundled in Slicer IGT extension)
- Volumes (loadable, built-in)
- Voting Binary Hole Filling Image Filter (cli, built-in)
- Welcome (loadable, built-in)
- Window Level Effect (scripted, bundled in Window Level Effect extension)
- Workflow Segmentation (loadable, bundled in Perk Tutor extension)
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
Modules by category
36 categories:
- BRAINS
- Cardiac MRI Toolkit
- CMF Registration
- Converters
- Developer Tools
- Diffusion
- Editor Effects
- Endoscopy
- Examples
- Exporter
- File
- Filtering
- IGT
- Informatics
- Legacy
- Mesh Generation
- Mesh Generation
- Microscopy
- Multidimensional data
- Multi Volume Support
- Perk Tutor
- Plastimatch
- Quantification
- Radiotherapy
- Registration
- Segmentation
- Shape Analysis
- Slicelets
- Surface Models
- Testing
- Unspecified
- Utilities
- Vascular Modeling Toolkit
- Wizards
- Work in Progress
- XNATSlicer
BRAINS
LabelStatistics
- BRAINSLabel Stats
Cardiac MRI Toolkit
- CMRToolkit Connected Threshold Filter
- CMRToolkit Isolated Connected Filter
- CMRToolkit Wizard
- CMRToolkit Inhomogeneity Correction
- CMRToolkit PVAntrum Cut
- CMRToolkit Axial Dilate
- Scar Visualization
- CMRToolkit Boolean REMOVEFilter
- LASegmentation Workflow
- CMRToolkit Automatic Left Atrial Scar
- CMRToolkit Registration
- CMRToolkit Registration BRAINSFit
CMF Registration
Voxelbase Registration
Converters
- Vector To Scalar Volume
- Crop Volume
- Orient Scalar Volume
- Create DICOMSeries
Developer Tools
- Event Broker
- Execution Model Tour
- Double Arrays
- Py Dev Remote Debug
- Cameras
- Extension Wizard
- Image Maker
DICOM Plugins
- DICOMLongitudinal PETCTPlugin
- DICOMRWVMPlugin
- Multi Volume Importer Plugin
- DICOMPETSUVPlugin
- Dicom Rt Import Plugin
- DICOMDiffusion Volume Plugin
- DICOMSegmentation Plugin
- Dicom Sro Import Plugin
- DICOMScalar Volume Plugin
- DICOMSlicer Data Bundle Plugin
Editor Extensions
Matlab
Diffusion
- Tractography Display
- DICOM2Full Brain Tractography
Diffusion Data Conversion
- DWIConvert
Diffusion Tensor Images
- Resample DTIVolume
- Diffusion Tensor Scalar Measurements
- Tractography Label Map Seeding
- Tractography Interactive Seeding
Diffusion Weighted Images
- DWIRician LMMSEFilter
- Resample Scalar Vector DWIVolume
- DWIJoint Rician LMMSEFilter
- DWITo DTIEstimation
- Finsler Tractography
- Finsler Backtracing
- Diffusion Weighted Volume Masking
FiberAnalysis
Tractography
- Fiber Bundle To Label Map
- UKFTractography
- Fiber Bundle Label Select
Editor Effects
Endoscopy
- Endoscopy
Examples
Exporter
File
Filtering
- Extract Skeleton
- Threshold Scalar Volume
- N4ITKBias Field Correction
- Simple Filters
- Image Label Combine
- Voting Binary Hole Filling Image Filter
- Histogram Matching
- Checker Board Filter
Arithmetic
- Multiply Scalar Volumes
- Add Scalar Volumes
- Cast Scalar Volume
- Subtract Scalar Volumes
- Mask Scalar Volume
Denoising
- Gradient Anisotropic Diffusion
- Median Image Filter
- Gaussian Blur Image Filter
- Curvature Anisotropic Diffusion
Morphology
- Grayscale Fill Hole Image Filter
- Erode Label
- Dilate Label
- Grayscale Grind Peak Image Filter
IGT
- Resection Volume
- Volume Reslice Driver
- Collect Fiducials
- Percutaneous Approach Analysis
- Create Models
- Port Placement
- Open IGTLink IF
- Tracker Stabilizer
- Path Explorer
- Ultrasound Snapshots
- Transform Fusion
- Breach Warning
- Gyro Guide
- Fiducial Registration Wizard
- Open IGTLink Remote
- Plus Remote
- i Gyne
- Needle Finder
- Fiducials To Model Registration
- Pivot Calibration
- Corner Annotation
Informatics
- Annotations
- Markups
- Units
- DICOM
- Sample Data
- Subject Hierarchy
- Data
- Colors
- Curve Maker
- TCIABrowser
Legacy
Converters
- BSpline To Deformation Field
Diffusion
Denoising
- DWIUnbiased Non Local Means Filter
Diffusion Data Conversion
- DTIimport
- DTIexport
Filtering
- Otsu Threshold Image Filter
- Resample Scalar Volume
Registration
- Test Grid Transform Registration
- Expert Automated Registration
Work in Progress
Diffusion Tensor
Test
- Diffusion Tensor Test
Mesh Generation
MeshGeneration
Microscopy
Multidimensional data
MultiVolume Support
- Multi Volume Explorer
- Multi Volume Importer
Perk Tutor
Plastimatch
Registration
Utilities
Quantification
- PETStandard Uptake Value Computation
- SUVFactor Calculator
- Spinal Curvature Measurement
- Pk Modeling
- Heterogeneity CAD
- PETSUVImage Maker
- Dice Computation
- Data Probe
ChangeQuantification
Radiotherapy
- Contour Comparison
- Dicom Rt Import
- Beams
- Dvh Comparison
- Isodose
- Contours
- Dose Accumulation
- Dicom Rt Export
- Dose Comparison
- Contour Morphology
- Planar Image
- Dicom Sro Import
- Dose Volume Histogram
Registration
- BRAINSResample
- Transforms
- BRAINSResize
- BRAINSFit
- PBNRR
- Perform Metric Test
Specialized
- ACPCTransform
- Fiducial Registration
- VBRAINSDemon Warp
- BRAINSDemon Warp
- Reformat
Segmentation
- IGR3D MABMIS Training
- ABC
- EMSegment Quick
- Simple Region Growing Segmentation
- Intensity Segmenter
- EMSegment
- Volume Clip With Roi
- Segment CAD
- Swiss Skull Stripper
- Airway Segmentation CLI
- LAScar Segmenter
- Sobolev Segmenter
- Volume Clip With Model
- IGR3D MABMIS Testing
Specialized
- EMSegment Command Line
- Robust Statistics Segmenter
- BRAINSROIAuto
Shape Analysis
Slicelets
Surface Models
- Surface Toolbox
- Model To Label Map
- Merge Models
- Probe Volume With Model
- Grayscale Model Maker
- Label Map Smoothing
- Model Maker
Testing
- Self Tests
- CLIROITest
- CLI4Test
- Threshold Threading Test
- Scoliosis Monitoring
- Performance Tests
- Slicer MRBTest
IGT Tests
- Breach Warning Self Test
SlicerRT Tests
- NAMIC Tutorial 2013June Self Test
- Dicom Rt Import Self Test
TestCases
- Slice Link Logic
- Atlas Tests
- RSNAQuant Tutorial
- Volume Rendering Scene Close
- test tractography display
- slicer Close Crash Bug2590
- Subject Hierarchy Generic Self Test
- View Controllers Slice Interpolation Bug1926
- Charting
- Scene Performance
- Markups In Compare Viewers Self Test
- Cardiac Agatston Measures
- fiber visibility crash2438
- scene Import2428
- RSNAVis Tutorial
- JRC2013Vis
- RSNA2012Prostate Demo
- Add Many Markups Fiducial Test
- Neurosurgical Planning Tutorial Markups Self Test
- Colors Scalar Bar Self Test
- Markups In Views Self Test
- Subject Hierarchy Core Plugins Self Test
- Change Tracker Self Test
- Fiducial Layout Switch Bug1914
- Slicer4Minute
- label Toggle Bug2049
Unspecified
- BRAINSDWICleanup
Utilities
- Thingiverse Browser
- BRAINSStrip Rotation
- EMSegment Transform To New Format
- Data Store
BRAINS
- BRAINSTransform Convert
Vascular Modeling Toolkit
Wizards
Work in Progress
Converters
Informatics
TestCases
- Reporting Self Test
- Label To DICOMSEGConverter Self Test
XNATSlicer
Modules by contributing organization
71 contributing organizations:
- Asclepios INRIA
- AZE R&D
- Boston Children's Hospital
- Brigham and Women's Hospital
- BWH
- BWH, SPL
- BWH, SUMS
- BWH/UAB
- CARMA
- College of Information Engineering, Zhejiang University of Technology, Hangzhou, China); Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China
- CRTC
- gatech
- GE
- Georgia Tech
- IBM
- Isomics
- Isomics Inc.
- Isomics, pieper@isomics.com
- Kingston General Hospital
- Kitware
- Kitware)
- MGH
- MGH, Boston
- Moka Creative, LLC, kumar.sunil.p@gmail.com
- MSC/NLM
- Noware
- Orobix
- Perk Lab at Queen's University
- Perk Lab, Queen's
- Perk Lab, Queen's University
- PMH
- PMH, Toronto
- Princess Margaret Cancer Centre
- Queen's
- Queen's Universit
- Queen's University
- Queen's University) Jaime Garcia-Guevara (Queen's University
- Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto
- RMP, PMH
- SAIC-Frederick, NCI-Frederick
- SBU
- SCI Institute
- Shiga University of Medical Science in Japan
- Shiga University of Medical Science, Japan, SPL
- SINAPSE
- SNR
- SPL
- SPL B&W Harvard
- SPL, BWH
- SPL, BWH, UPenn
- SUMS
- Surgical Planning Lab
- UAB
- UHN, Toronto
- Uiowa
- UIowa
- UNC
- Univ of Michigan
- Univ. of Iowa
- University 'Magna Graecia' of Catanzaro
- University College Cork
- University of Heidelberg
- University of Iowa
- University of Iowa) and Andrey Fedorov (SPL
- UPenn
- Utah
- UVa
- UWA
- Wash U-St. Louis, dmarcus@wustl.edu
- while at GE
Asclepios INRIA
AZE R&D
- JRC2013Vis
Boston Children's Hospital
- Centerline Computation (scripted, bundled in VMTK extension)
- Level Set Segmentation (scripted, bundled in VMTK extension)
- Vesselness Filtering (scripted, bundled in VMTK extension)
Brigham and Women's Hospital
- Corner Annotation (scripted, bundled in Corner Annotation extension)
- Surface Toolbox (scripted, built-in)
- test tractography display
- Volume Reslice Driver (loadable, bundled in Slicer IGT extension)
BWH
- Add Many Markups Fiducial Test
- Change Tracker Self Test
- Colors Scalar Bar Self Test
- Curve Maker (scripted, bundled in Curve Maker extension)
- Dice Computation (loadable, bundled in Dice Computation extension)
- DICOMRWVMPlugin
- Fiducial Layout Switch Bug1914
- Heterogeneity CAD (scripted, bundled in Open CAD extension)
- Markups (loadable, built-in)
- Markups In Compare Viewers Self Test
- Markups In Views Self Test
- Neurosurgical Planning Tutorial Markups Self Test
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
- Segment CAD (scripted, bundled in Open CAD extension)
- Volume Rendering Scene Close (scripted, built-in)
- Window Level Effect (scripted, bundled in Window Level Effect extension)
BWH, SPL
- Crop Volume (loadable, built-in)
BWH, SUMS
- Corner Annotation (scripted, bundled in Corner Annotation extension)
BWH/UAB
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
CARMA
- CMRToolkit Automatic Left Atrial Scar (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
- LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
- Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)
College of Information Engineering, Zhejiang University of Technology, Hangzhou, China); Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China
- Gyro Guide (scripted, bundled in Gyro Guide extension)
CRTC
- Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
- Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
- PBNRR (cli, bundled in PBNRR extension)
gatech
- Robust Statistics Segmenter (cli, built-in)
GE
- Add Scalar Volumes (cli, built-in)
- Charting (scripted, built-in)
- Checker Board Filter (cli, built-in)
- Create DICOMSeries (cli, built-in)
- Curvature Anisotropic Diffusion (cli, built-in)
- Diffusion Tensor Test (cli, built-in)
- DWIConvert (cli, built-in)
- Execution Model Tour (cli, built-in)
- Gradient Anisotropic Diffusion (cli, built-in)
- Grayscale Fill Hole Image Filter (cli, built-in)
- Grayscale Grind Peak Image Filter (cli, built-in)
- Grayscale Model Maker (cli, built-in)
- Histogram Matching (cli, built-in)
- Label Map Smoothing (cli, built-in)
- Median Image Filter (cli, built-in)
- Model Maker (cli, built-in)
- Model To Label Map (cli, built-in)
- Multiply Scalar Volumes (cli, built-in)
- Orient Scalar Volume (cli, built-in)
- Otsu Threshold Image Filter (cli, built-in)
- Pk Modeling (cli, bundled in Pk Modeling extension)
- Resample Scalar Volume (cli, built-in)
- Simple Region Growing Segmentation (cli, built-in)
- Slice Link Logic (scripted, built-in)
- Slicer4Minute (scripted, built-in)
- Spacing Aware Curvature Diffusion (cli, bundled in IASEM extension)
- Subtract Scalar Volumes (cli, built-in)
- View Controllers (loadable, built-in)
- View Controllers Slice Interpolation Bug1926
- Voting Binary Hole Filling Image Filter (cli, built-in)
Georgia Tech
- Carrera Slice (loadable, bundled in Carrera Slice extension)
IBM
- Annotations (loadable, built-in)
Isomics
- Atlas Tests
- Binary Watershed Effect (scripted, bundled in IASEM extension)
- Centerline Computation (scripted, bundled in VMTK extension)
- Compare Volumes (scripted, bundled in CMFreg extension)
- Data (loadable, built-in)
- Data Probe (scripted, built-in)
- DICOM (scripted, built-in)
- Endoscopy (scripted, built-in)
- fiber visibility crash2438
- Fiber Bundle To Label Map (scripted, built-in)
- label Toggle Bug2049
- Landmark Registration (scripted, bundled in CMFreg extension)
- Level Set Segmentation (scripted, bundled in VMTK extension)
- Models (loadable, built-in)
- Performance Tests
- Reporting (loadable, bundled in Reporting extension)
- RSNA2012Prostate Demo
- RSNAQuant Tutorial
- RSNAVis Tutorial
- Sample Data (scripted, built-in)
- scene Import2428
- Self Tests
- Simple Filters (scripted, built-in)
- slicer Close Crash Bug2590
- Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
- Tractography Interactive Seeding (loadable, built-in)
- Transforms (loadable, built-in)
- Vector To Scalar Volume (scripted, built-in)
- Vesselness Filtering (scripted, bundled in VMTK extension)
- View Controllers (loadable, built-in)
- Volume Rendering (loadable, built-in)
- Volumes (loadable, built-in)
Isomics Inc.
- DICOMDiffusion Volume Plugin
- DICOMLongitudinal PETCTPlugin
- DICOMScalar Volume Plugin
- DICOMSlicer Data Bundle Plugin
- Slicer MRBTest
- Threshold Threading Test
Isomics, pieper@isomics.com
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
Kingston General Hospital
- Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)
Kitware
- Cameras (loadable, built-in)
- Colors (loadable, built-in)
- Data (loadable, built-in)
- Data Store (loadable, built-in)
- Double Arrays (loadable, built-in)
- Event Broker
- Expert Automated Registration (cli, built-in)
- Extension Wizard (scripted, built-in)
- Extract Skeleton (cli, built-in)
- Fast Grow Cut (loadable, bundled in Fast Grow Cut Effect extension)
- Fast Grow Cut Segmenter (loadable, bundled in Carrera Slice extension)
- fiber visibility crash2438
- Fiducial Registration (cli, built-in)
- Gaussian Blur Image Filter (cli, built-in)
- Image Maker (cli, bundled in Image Maker extension)
- label Toggle Bug2049
- Matlab Commander (cli, bundled in Matlab Bridge extension)
- Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
- Models (loadable, built-in)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- Port Placement (scripted, bundled in Port Placement extension)
- Reformat (loadable, built-in)
- Sample Data (scripted, built-in)
- Scene Performance (scripted, built-in)
- Simple Filters (scripted, built-in)
- Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
- Threshold Scalar Volume (cli, built-in)
- Tractography Display (loadable, built-in)
- Transforms (loadable, built-in)
- Units (loadable, built-in)
- View Controllers (loadable, built-in)
- Volume Rendering (loadable, built-in)
- Volumes (loadable, built-in)
- Welcome (loadable, built-in)
Kitware)
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
MGH
- Dicom Sro Export (scripted, bundled in Slicer RT extension)
- Pk Modeling (cli, bundled in Pk Modeling extension)
- Plm Register (scripted, bundled in Slicer RT extension)
MGH, Boston
- Dicom Rt Export (loadable, bundled in Slicer RT extension)
Moka Creative, LLC, kumar.sunil.p@gmail.com
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
MSC/NLM
- Label Object Statistics (scripted, bundled in IASEM extension)
- Simple Filters (scripted, built-in)
Noware
- Swiss Skull Stripper (cli, bundled in Swiss Skull Stripper extension)
Orobix
- Centerline Computation (scripted, bundled in VMTK extension)
- Level Set Segmentation (scripted, bundled in VMTK extension)
- Surface Toolbox (scripted, built-in)
- Vesselness Filtering (scripted, bundled in VMTK extension)
PerkLab at Queen's University
- Py Dev Remote Debug (scripted, bundled in Py Dev Remote Debug extension)
PerkLab, Queen's
- Metafile Importer (loadable, bundled in Multidim Data extension)
- Sequence Browser (loadable, bundled in Multidim Data extension)
- Sequences (loadable, bundled in Multidim Data extension)
- Transforms (loadable, built-in)
PerkLab, Queen's University
- Matlab Commander (cli, bundled in Matlab Bridge extension)
- Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
- Plus Remote (scripted, bundled in Slicer IGT extension)
- Volume Clip With Model (scripted, bundled in Volume Clip extension)
PMH
- Colors Scalar Bar Self Test
- Sequence Browser (loadable, bundled in Multidim Data extension)
- Sequences (loadable, bundled in Multidim Data extension)
PMH, Toronto
- Dicom Rt Export (loadable, bundled in Slicer RT extension)
- Isodose (loadable, bundled in Slicer RT extension)
Princess Margaret Cancer Centre
- Dicom Sro Export (scripted, bundled in Slicer RT extension)
- Dicom Sro Import (loadable, bundled in Slicer RT extension)
Queen's
- Beams (loadable, bundled in Slicer RT extension)
- Contour Comparison (loadable, bundled in Slicer RT extension)
- Contour Morphology (loadable, bundled in Slicer RT extension)
- Contours (loadable, bundled in Slicer RT extension)
- Data (loadable, built-in)
- Dicom Rt Export (loadable, bundled in Slicer RT extension)
- Dicom Rt Import (loadable, bundled in Slicer RT extension)
- Dicom Rt Import Self Test
- Dose Accumulation (loadable, bundled in Slicer RT extension)
- Dose Comparison (loadable, bundled in Slicer RT extension)
- Dose Volume Histogram (loadable, bundled in Slicer RT extension)
- Gel Dosimetry Analysis Algo (loadable, bundled in Gel Dosimetry Analysis extension)
- Isodose (loadable, bundled in Slicer RT extension)
- NAMIC Tutorial 2013June Self Test
- Planar Image (loadable, bundled in Slicer RT extension)
- Subject Hierarchy (loadable, built-in)
- Subject Hierarchy Core Plugins Self Test
- Subject Hierarchy Generic Self Test
- Vff File Reader (loadable, bundled in Slicer RT extension)
Queen's Universit
- Fiducials To Model Registration (scripted, bundled in Slicer IGT extension)
Queen's University
- Breach Warning (loadable, bundled in Slicer IGT extension)
- Collect Fiducials (loadable, bundled in Slicer IGT extension)
- Create Models (loadable, bundled in Slicer IGT extension)
- Dvh Comparison (scripted, bundled in Slicer RT extension)
- Fiducial Registration Wizard (loadable, bundled in Slicer IGT extension)
- Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)
- Open IGTLink Remote (loadable, bundled in Slicer IGT extension)
- Perk Evaluator (loadable, bundled in Perk Tutor extension)
- Pivot Calibration (loadable, bundled in Slicer IGT extension)
- Python Metrics Calculator (scripted, bundled in Perk Tutor extension)
- Resection Volume (scripted, bundled in Resection Planner extension)
- Scoliosis Monitoring (scripted, bundled in Scoliosis extension)
- Spinal Curvature Measurement (scripted, bundled in Scoliosis extension)
- Transform Fusion (loadable, bundled in Slicer IGT extension)
- Transform Recorder (loadable, bundled in Perk Tutor extension)
- Ultrasound Snapshots (loadable, bundled in Slicer IGT extension)
- Volume Clip With Roi (scripted, bundled in Volume Clip extension)
- Volume Reslice Driver (loadable, bundled in Slicer IGT extension)
- Workflow Segmentation (loadable, bundled in Perk Tutor extension)
Queen's University) Jaime Garcia-Guevara (Queen's University
- Breach Warning Self Test
Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto
- Matlab Commander (cli, bundled in Matlab Bridge extension)
- Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
RMP, PMH
- Dicom Sro Import Plugin
SAIC-Frederick, NCI-Frederick
- Volume Rendering (loadable, built-in)
SBU
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
SCI Institute
- Cleaver CLI (cli, bundled in Cleaver Extension extension)
Shiga University of Medical Science in Japan
- Corner Annotation (scripted, bundled in Corner Annotation extension)
Shiga University of Medical Science, Japan, SPL
- Percutaneous Approach Analysis (scripted, bundled in Percutaneous Approach Analysis extension)
SINAPSE
- Cardiac Agatston Measures (scripted, bundled in Cardiac Agaston Measures extension)
SNR
- Path Explorer (loadable, bundled in Slicer IGT extension)
- Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)
SPL
- DICOM2Full Brain Tractography (scripted, built-in)
- Label To DICOMSEGConverter Self Test
- Percutaneous Approach Analysis (scripted, bundled in Percutaneous Approach Analysis extension)
- Pk Modeling (cli, bundled in Pk Modeling extension)
- Reporting Self Test
- Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)
SPL B&W Harvard
SPL, BWH
- ACPCTransform (cli, built-in)
- Annotations (loadable, built-in)
- BSpline To Deformation Field (cli, built-in)
- Cast Scalar Volume (cli, built-in)
- Colors (loadable, built-in)
- Data (loadable, built-in)
- Diffusion Tensor Scalar Measurements (cli, built-in)
- Diffusion Weighted Volume Masking (cli, built-in)
- DTIexport (cli, built-in)
- DTIimport (cli, built-in)
- DWITo DTIEstimation (cli, built-in)
- Fiducial Registration (cli, built-in)
- Grayscale Model Maker (cli, built-in)
- Image Label Combine (cli, built-in)
- Mask Scalar Volume (cli, built-in)
- Merge Models (cli, built-in)
- Model Maker (cli, built-in)
- Models (loadable, built-in)
- Model To Label Map (cli, built-in)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- N4ITKBias Field Correction (cli, built-in)
- PETStandard Uptake Value Computation (cli, built-in)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- Probe Volume With Model (cli, built-in)
- Reporting (loadable, bundled in Reporting extension)
- Robust Statistics Segmenter (cli, built-in)
- Scene Views (loadable, built-in)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
- TCIABrowser (scripted, bundled in TCIABrowser extension)
- Test Grid Transform Registration (cli, built-in)
- Threshold Scalar Volume (cli, built-in)
- Tractography Label Map Seeding (cli, built-in)
- View Controllers (loadable, built-in)
- Volume Rendering (loadable, built-in)
- Volumes (loadable, built-in)
- Welcome (loadable, built-in)
SPL, BWH, UPenn
- Merge Models (cli, built-in)
SUMS
- Corner Annotation (scripted, bundled in Corner Annotation extension)
Surgical Planning Lab
- Label To DICOMSEGConverter (scripted, bundled in Reporting extension)
UAB
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
- Sobolev Segmenter (cli, bundled in Sobolev Segmenter extension)
UHN, Toronto
- Contour Comparison (loadable, bundled in Slicer RT extension)
- Contour Morphology (loadable, bundled in Slicer RT extension)
- Contours (loadable, bundled in Slicer RT extension)
- Dicom Rt Import (loadable, bundled in Slicer RT extension)
- Dose Accumulation (loadable, bundled in Slicer RT extension)
- Dose Comparison (loadable, bundled in Slicer RT extension)
- Dose Volume Histogram (loadable, bundled in Slicer RT extension)
Uiowa
- DWIConvert (cli, built-in)
UIowa
- DWIConvert (cli, built-in)
UNC
- DWIRician LMMSEFilter (cli, built-in)
- Extract Skeleton (cli, built-in)
- Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
- Port Placement (scripted, bundled in Port Placement extension)
- Resample DTIVolume (cli, built-in)
- Resample Scalar Vector DWIVolume (cli, built-in)
Univ of Michigan
- Surface Registration (scripted, bundled in CMFreg extension)
Univ. of Iowa
- DICOMPETSUVPlugin
- DICOMRWVMPlugin
University 'Magna Graecia' of Catanzaro
- Plastimatch Py (loadable, bundled in Slicer RT extension)
University College Cork
- Airway Segmentation CLI (cli, bundled in Airway Segmentation extension)
University of Heidelberg
- Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)
University of Iowa
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
University of Iowa) and Andrey Fedorov (SPL
- Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)
UPenn
- Annotations (loadable, built-in)
- EMSegment (loadable, built-in)
- N4ITKBias Field Correction (cli, built-in)
- Scene Views (loadable, built-in)
Utah
- Label Map Smoothing (cli, built-in)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
UVa
- DWIJoint Rician LMMSEFilter (cli, built-in)
- DWIRician LMMSEFilter (cli, built-in)
- DWIUnbiased Non Local Means Filter (cli, built-in)
UWA
- Thingiverse Browser (scripted, bundled in Thingiverse Browser extension)
WashU-St. Louis, dmarcus@wustl.edu
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
while at GE
- Pk Modeling (cli, bundled in Pk Modeling extension)
Modules by contributing individual
185 contributing individuals:
- /
- a
- Akila Viswanathan
- Alan Morris (Utah)
- Alex Yarmakovich (Isomics)
- Alex Yarmarkovich (Kitware))
- Ali Ghayoor
- Alireza Mehrtash (SPL and BWH)
- Allen Tannenbaum (Stony Brook University)
- Amelie Meyer (PerkLab, Queen's University)
- Analysis Laboratory
- Andinet Enquobahrie (Kitware)
- Andras Lasso (PerkLab, Queen's University)
- Andreas Freudling (SPL, BWH)
- Andrey Fedorov (SPL B&W Harvard)
- Andriy Kot (CRTC)
- Anonymous
- Antonio Damato
- Antonio Tristan Vega (UVa)
- Anuja Sharma
- Arie Nakhmani (UAB)
- Atsushi Yamada (SNR)
- Beatriz Paniagua from Department of Orthodontics (UNC)
- Benjamin Long (Kitware)
- Benjamin Yvernault
- Bill Lorensen (Noware)
- Brad Davis
- Bradley Lowekamp (MSC/NLM)
- Brian Zenger (CARMA)
- BWH
- c
- Carl-Fredrik Westin
- Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez (Kitware))
- Casey B Goodlett (Kitware)
- Charles Marion (Kitware)
- Christian Baumgartner
- Csaba Pinter (PerkLab, Queen's University)
- Dan Marcus (Washington University in St. Louis)
- Daniel Blezek (GE)
- Daniel Haehn (UPenn)
- Danny Perry (Utah)
- Demian Wassermann (Brigham and Women's Hospital)
- Dinggang Shen (UNC)
- Dirk Padfield (GE)
- Dominik Meier (SPL, BWH)
- e
- er (Kingston General Hospital)
- Ethan Ulrich (Univ. of Iowa)
- Eugene Kholmovski (CARMA)
- ez (UVa)
- Fotis Drakopoulos (CRTC)
- Francois Budin (NIRAL, UNC)
- Franklin King (PerkLab, Queen's University)
- Greg Gardner (Utah)
- Greg Harris
- Greg Sharp (MGH, Boston)
- Gregory Sharp (MGH)
- Guido Gerig (UNC)
- Guillaume Pernelle
- Hans J. Johnson
- Hans Johnson (SINAPSE)
- hans-johnson -at- uiowa.edu
- http://www.psychiatry.uiowa.edu
- i
- Ipek Oguz
- Ivan Kolesov (Stony Brook University)
- Jan Egger
- Jayender Jagadeesan (BWH)
- Jean-Baptiste Berger (Kitware)
- Jean-Christophe Fillion-Robin (Kitware)
- Jennifer Andrea (PerkLab, Queen's University)
- Jessica Forbes (SINAPSE)
- Jim Miller (GE)
- Johan Andruejol (Kitware)
- John Evans (MGH)
- Jonathan Bronson (SCI Institute)
- Josh Cates (Utah)
- Joy Matsui (UIowa)
- Julien Finet (Kitware)
- Julien Jomier (Kitware)
- Junichi Tokuda (BWH)
- K
- Kent Williams (UIowa)
- Kent WIlliams
- Kevin Alex (Kingston General Hospital)
- Kevin Wang (Princess Margaret Cancer Centre)
- Kilian Pohl (UPenn)
- Koichiro Murakami (SUMS)
- Kyle Sunderl (Queen's University)
- l
- Lauren Barber
- Lauren O'Donnell (SPL, BWH)
- Laurent Chauvin (BWH)
- Liang-Jia Zhu (UAB)
- Liangjia Zhu (Stony Brook University)
- Luca Antiga (Orobix)
- Luis G. Torres (UNC)
- Luping Fang (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
- m
- Marc Niethammer (UNC)
- Marcel Prastawa prastawa@sci.utah.edu
- Mark Scully (Uiowa)
- Markus Van Tol (University of Iowa) and Andrey Fedorov (SPL)
- Martin Styner (UNC)
- Mason Winsauer
- Matt Lougheed (PerkLab, Queen's University)
- Mattea Welch (PerkLab, Queen's University)
- Matthew Holden (Queen's University)
- Matthew S. Holden (Queen's University)
- Matthew Woehlke (Kitware)
- Michael Jeulin-Lagarrigue (Kitware)
- Minjeong Kim (UNC)
- Nabgha Fahrat
- Neuro Image Resarch
- Nicholas Herlambang (AZE R&D)
- Nick Tustison (UPenn)
- Nicole Aucoin (BWH)
- Nigel Goh (UWA)
- Nikos Chrisochoides (CRTC)
- Olivier Clatz (Asclepios INRIA) and Nikos Chrisochoides (CRTC)
- p
- Paolo Zaffino (University 'Magna Graecia' of Catanzaro)
- Pat Marion (Kitware)
- Paul Mercea (University of Heidelberg)
- Pengdong Xiao (Department of Orthodontics, UNC)
- Peter Black (BWH)
- Peter Karasev (Georgia Tech)
- Peter Savadjiev (Kitware))
- Pierre Seroul (UNC)
- Pietro Nardelli (University College Cork)
- Please direct questions or suggestions to http://groups.google.com/group/plastimatch
- Polina Goll
- Qing Pan (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
- R
- r
- Raul San Jose (SPL, BWH)
- Rob Mac Leod (Utah)
- Ron Kikinis (BWH)
- Ross Whitaker (Utah)
- Ruifeng Chen (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
- S
- Salma Bengali (CARMA)
- Sam Song
- Santiago Aja Fern (UVa)
- Sebastien Barré (Kitware)
- Sebastien Barre
- Shigeyuki Naka (SUMS)
- Soichiro Tani (BWH, SUMS)
- Sonia Pujol (SPL, BWH)
- Stefan Lienhard
- Stephen Aylward (Kitware)
- Stephen R Aylward (Kitware)
- Steve Pieper (SPL)
- Sunil Kumar (Moka Creative, LLC, kumar.sunil.p@gmail.com)
- Sylvain Bouix (BWH)
- Sylvain Gouttard
- t
- Tamas Ungi (PerkLab, Queen's University)
- the University of North Carolina at Chapel Hill (UNC)
- Tina Kapur
- Tobias Penzkofer
- Tohru Tani (SUMS)
- UNC Medical School
- Uof M School Of Dentistry
- Uof M School of Dentistry
- Vince Magnotta (UIowa)
- Vincent A. Magnotta
- Vincent Magnotta
- Vinicius Boen (Univ of Michigan)
- Vivek Narayan (BWH)
- Wendy Plesniak (SPL, BWH)
- Xiaodong Tao (GE)
- Xiaofeng Liu (GE GLobal Research)
- Xiaojun Chen
- y Wells
- Yanling Liu (SAIC-Frederick, NCI-Frederick)
- Yi Gao (BWH/UAB)
- Yinglin Lee (SPL, BWH)
- Yingxuan Zhu (GE)
- Yinpeng Li
- Yixun Liu (CRTC)
- Yogesh Rathi (yogesh@bwh.harvard.edu)
- Yong Zhang (IBM)
- Yumin Yuan
- Yundi Shi
/
- Dicom Rt Import Plugin
a
- Dicom Rt Import Plugin
Akila Viswanathan
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
Alan Morris
- CMRToolkit Automatic Left Atrial Scar (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
- Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
Alex Yarmakovich
- Models (loadable, built-in)
- Tractography Interactive Seeding (loadable, built-in)
Alex Yarmarkovich
- Data (loadable, built-in)
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
- Image Label Combine (cli, built-in)
- Transforms (loadable, built-in)
- Volume Rendering (loadable, built-in)
- Volumes (loadable, built-in)
Ali Ghayoor
- BRAINSTransform Convert (cli, built-in)
- Perform Metric Test (cli, built-in)
Alireza Mehrtash
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
- TCIABrowser (scripted, bundled in TCIABrowser extension)
Allen Tannenbaum
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- Robust Statistics Segmenter (cli, built-in)
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
- Sobolev Segmenter (cli, bundled in Sobolev Segmenter extension)
Amelie Meyer
- Plus Remote (scripted, bundled in Slicer IGT extension)
Analysis Laboratory
- Apply Matrix (cli, bundled in CMFreg extension)
- Downsize (cli, bundled in CMFreg extension)
- Growing (cli, bundled in CMFreg extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Mask Creation (cli, bundled in CMFreg extension)
- Non Growing (cli, bundled in CMFreg extension)
Andinet Enquobahrie
- Port Placement (scripted, bundled in Port Placement extension)
Andras Lasso
- Contour Comparison (loadable, bundled in Slicer RT extension)
- Contour Morphology (loadable, bundled in Slicer RT extension)
- Contours (loadable, bundled in Slicer RT extension)
- Dicom Rt Export (loadable, bundled in Slicer RT extension)
- Dicom Rt Import (loadable, bundled in Slicer RT extension)
- Dose Accumulation (loadable, bundled in Slicer RT extension)
- Dose Comparison (loadable, bundled in Slicer RT extension)
- Dose Volume Histogram (loadable, bundled in Slicer RT extension)
- Isodose (loadable, bundled in Slicer RT extension)
- Matlab Commander (cli, bundled in Matlab Bridge extension)
- Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
- Metafile Importer (loadable, bundled in Multidim Data extension)
- Plus Remote (scripted, bundled in Slicer IGT extension)
- Py Dev Remote Debug (scripted, bundled in Py Dev Remote Debug extension)
- Sequence Browser (loadable, bundled in Multidim Data extension)
- Sequences (loadable, bundled in Multidim Data extension)
- Transforms (loadable, built-in)
- Volume Clip With Model (scripted, bundled in Volume Clip extension)
- Volume Clip With Roi (scripted, bundled in Volume Clip extension)
Andreas Freudling
- Volume Rendering (loadable, built-in)
Andrey Fedorov
- Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
- BSpline To Deformation Field (cli, built-in)
- Change Tracker (scripted, bundled in Change Tracker extension)
- Change Tracker Self Test
- Crop Volume (loadable, built-in)
- DICOMRWVMPlugin
- DICOMSegmentation Plugin
- Intensity Difference Metric (cli, bundled in Change Tracker extension)
- Label To DICOMSEGConverter (scripted, bundled in Reporting extension)
- Label To DICOMSEGConverter Self Test
- Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- Multi Volume Importer Plugin
- N4ITKBias Field Correction (cli, built-in)
- PBNRR (cli, bundled in PBNRR extension)
- Pk Modeling (cli, bundled in Pk Modeling extension)
- Reporting (loadable, bundled in Reporting extension)
- Reporting Self Test
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
- TCIABrowser (scripted, bundled in TCIABrowser extension)
- Window Level Effect (scripted, bundled in Window Level Effect extension)
Andriy Kot
Anonymous
- CLIROITest (cli, built-in)
- EMSegment Transform To New Format (cli, built-in)
Antonio Damato
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
Antonio Tristan Vega
- DWIJoint Rician LMMSEFilter (cli, built-in)
- DWIRician LMMSEFilter (cli, built-in)
- DWIUnbiased Non Local Means Filter (cli, built-in)
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
Anuja Sharma
- dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
Arie Nakhmani
- Sobolev Segmenter (cli, bundled in Sobolev Segmenter extension)
Atsushi Yamada
- Corner Annotation (scripted, bundled in Corner Annotation extension)
- Path Explorer (loadable, bundled in Slicer IGT extension)
Beatriz Paniagua from Department of Orthodontics
- Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
Benjamin Long
- Sample Data (scripted, built-in)
Benjamin Yvernault
- DTIAtlas Fiber Analyzer (cli, bundled in DTIAtlas Fiber Analyzer extension)
Bill Lorensen
- Add Scalar Volumes (cli, built-in)
- Checker Board Filter (cli, built-in)
- Create DICOMSeries (cli, built-in)
- Curvature Anisotropic Diffusion (cli, built-in)
- Diffusion Tensor Test (cli, built-in)
- Execution Model Tour (cli, built-in)
- Gradient Anisotropic Diffusion (cli, built-in)
- Grayscale Fill Hole Image Filter (cli, built-in)
- Grayscale Grind Peak Image Filter (cli, built-in)
- Grayscale Model Maker (cli, built-in)
- Histogram Matching (cli, built-in)
- Median Image Filter (cli, built-in)
- Model Maker (cli, built-in)
- Multiply Scalar Volumes (cli, built-in)
- Orient Scalar Volume (cli, built-in)
- Otsu Threshold Image Filter (cli, built-in)
- Resample Scalar Volume (cli, built-in)
- Spacing Aware Curvature Diffusion (cli, bundled in IASEM extension)
- Subtract Scalar Volumes (cli, built-in)
- Swiss Skull Stripper (cli, bundled in Swiss Skull Stripper extension)
- Voting Binary Hole Filling Image Filter (cli, built-in)
Brad Davis
- EMSegment Command Line (cli, built-in)
Bradley Lowekamp
- Bin Shrink (cli, bundled in IASEM extension)
- Double Threshold Effect (scripted, bundled in IASEM extension)
- IASEMImport (cli, bundled in IASEM extension)
- IASEMImport Series (cli, bundled in IASEM extension)
- Label Object Statistics (scripted, bundled in IASEM extension)
- Simple Filters (scripted, built-in)
- Spacing Aware Curvature Diffusion (cli, bundled in IASEM extension)
Brian Zenger
- CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
BWH
- DICOMSegmentation Plugin
- Multi Volume Importer Plugin
c
- Dicom Rt Import Plugin
Carl-Fredrik Westin
- UKFTractography (cli, bundled in UKFTractography extension)
Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
Casey B Goodlett
- Expert Automated Registration (cli, built-in)
- Fiducial Registration (cli, built-in)
Charles Marion
- Data Store (loadable, built-in)
Christian Baumgartner
- Convert VTK (cli, bundled in UKFTractography extension)
- UKFTractography (cli, bundled in UKFTractography extension)
Csaba Pinter
- Beams (loadable, bundled in Slicer RT extension)
- Contour Comparison (loadable, bundled in Slicer RT extension)
- Contour Morphology (loadable, bundled in Slicer RT extension)
- Contours (loadable, bundled in Slicer RT extension)
- Data (loadable, built-in)
- Dicom Rt Export (loadable, bundled in Slicer RT extension)
- Dicom Rt Import (loadable, bundled in Slicer RT extension)
- Dicom Rt Import Self Test
- Dose Accumulation (loadable, bundled in Slicer RT extension)
- Dose Comparison (loadable, bundled in Slicer RT extension)
- Dose Volume Histogram (loadable, bundled in Slicer RT extension)
- Dvh Comparison (scripted, bundled in Slicer RT extension)
- Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)
- Gel Dosimetry Analysis Algo (loadable, bundled in Gel Dosimetry Analysis extension)
- Isodose (loadable, bundled in Slicer RT extension)
- NAMIC Tutorial 2013June Self Test
- Planar Image (loadable, bundled in Slicer RT extension)
- Subject Hierarchy (loadable, built-in)
- Subject Hierarchy Core Plugins Self Test
- Subject Hierarchy Generic Self Test
- Vff File Reader (loadable, bundled in Slicer RT extension)
Dan Marcus
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
Daniel Blezek
- Execution Model Tour (cli, built-in)
Daniel Haehn
- Annotations (loadable, built-in)
- Centerline Computation (scripted, bundled in VMTK extension)
- EMSegment (loadable, built-in)
- EMSegment Command Line (cli, built-in)
- Level Set Segmentation (scripted, bundled in VMTK extension)
- Merge Models (cli, built-in)
- Scene Views (loadable, built-in)
- Vesselness Filtering (scripted, bundled in VMTK extension)
Danny Perry
- CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
Demian Wassermann
- DICOM2Full Brain Tractography (scripted, built-in)
- Diffusion Weighted Volume Masking (cli, built-in)
- Fiber Bundle Label Select (cli, built-in)
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
- test tractography display
- Tractography Label Map Seeding (cli, built-in)
Dinggang Shen
- IGR3D MABMIS Testing (cli, bundled in MABMIS extension)
- IGR3D MABMIS Training (cli, bundled in MABMIS extension)
Dirk Padfield
- Label Map Smoothing (cli, built-in)
Dominik Meier
- Fiducial Registration (cli, built-in)
e
- Dicom Rt Import Plugin
er
- Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)
Ethan Ulrich
- DICOMPETSUVPlugin
- DICOMRWVMPlugin
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
Eugene Kholmovski
- CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
ez
- DWIJoint Rician LMMSEFilter (cli, built-in)
- DWIRician LMMSEFilter (cli, built-in)
- DWIUnbiased Non Local Means Filter (cli, built-in)
Fotis Drakopoulos
- Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
- Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
- PBNRR (cli, bundled in PBNRR extension)
Francois Budin
- DTIAtlas Fiber Analyzer (cli, bundled in DTIAtlas Fiber Analyzer extension)
- dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
- Mesh To Label Map (cli, bundled in Mesh To Label Map extension)
- Resample DTIVolume (cli, built-in)
- Resample Scalar Vector DWIVolume (cli, built-in)
Franklin King
- Collect Fiducials (loadable, bundled in Slicer IGT extension)
- Pivot Calibration (loadable, bundled in Slicer IGT extension)
- Plus Remote (scripted, bundled in Slicer IGT extension)
- Scoliosis Monitoring (scripted, bundled in Scoliosis extension)
- Spinal Curvature Measurement (scripted, bundled in Scoliosis extension)
- Transform Fusion (loadable, bundled in Slicer IGT extension)
- Transforms (loadable, built-in)
Greg Gardner
- CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
Greg Harris
- BRAINSDemon Warp (cli, built-in)
- BRAINSResample (cli, built-in)
- VBRAINSDemon Warp (cli, built-in)
Greg Sharp
- Dicom Rt Export (loadable, bundled in Slicer RT extension)
Gregory Sharp
- Dicom Sro Export (scripted, bundled in Slicer RT extension)
- Plm Register (scripted, bundled in Slicer RT extension)
Guido Gerig
- dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Extract Skeleton (cli, built-in)
Guillaume Pernelle
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
Hans J. Johnson
- BRAINSDemon Warp (cli, built-in)
- BRAINSFit (cli, built-in)
- BRAINSROIAuto (cli, built-in)
- BRAINSTransform Convert (cli, built-in)
- VBRAINSDemon Warp (cli, built-in)
Hans Johnson
- BRAINSResample (cli, built-in)
- BRAINSResize (cli, built-in)
- Cardiac Agatston Measures (scripted, bundled in Cardiac Agaston Measures extension)
- DWIConvert (cli, built-in)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
- UKFTractography (cli, bundled in UKFTractography extension)
hans-johnson -at- uiowa.edu
- BRAINSFit (cli, built-in)
- BRAINSROIAuto (cli, built-in)
http://www.psychiatry.uiowa.edu
- BRAINSFit (cli, built-in)
- BRAINSROIAuto (cli, built-in)
i
- Dicom Rt Import Plugin
Ipek Oguz
- Convert VTK (cli, bundled in UKFTractography extension)
- Mesh To Label Map (cli, bundled in Mesh To Label Map extension)
- UKFTractography (cli, bundled in UKFTractography extension)
Ivan Kolesov
- Carrera Slice (loadable, bundled in Carrera Slice extension)
Jan Egger
Jayender Jagadeesan
- Heterogeneity CAD (scripted, bundled in Open CAD extension)
- Segment CAD (scripted, bundled in Open CAD extension)
- Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)
Jean-Baptiste Berger
- Data Store (loadable, built-in)
- DTIAtlas Fiber Analyzer (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Fiber Compare (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Merge Stat With Fiber (cli, bundled in DTIAtlas Fiber Analyzer extension)
Jean-Christophe Fillion-Robin
- CLI4Test
- Data Store (loadable, built-in)
- Fast Grow Cut (loadable, bundled in Fast Grow Cut Effect extension)
- Fast Grow Cut Segmenter (loadable, bundled in Carrera Slice extension)
- fiber visibility crash2438
- label Toggle Bug2049
- Matlab Commander (cli, bundled in Matlab Bridge extension)
- Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- Sample Data (scripted, built-in)
- Simple Filters (scripted, built-in)
- Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
- Transforms (loadable, built-in)
- View Controllers (loadable, built-in)
- Welcome (loadable, built-in)
Jennifer Andrea
- Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)
- Vff File Reader (loadable, bundled in Slicer RT extension)
Jessica Forbes
- Cardiac Agatston Measures (scripted, bundled in Cardiac Agaston Measures extension)
Jim Miller
- Charting (scripted, built-in)
- Pk Modeling (cli, bundled in Pk Modeling extension)
- Simple Region Growing Segmentation (cli, built-in)
- Slice Link Logic (scripted, built-in)
- Slicer4Minute (scripted, built-in)
- View Controllers (loadable, built-in)
- View Controllers Slice Interpolation Bug1926
Johan Andruejol
- Units (loadable, built-in)
John Evans
- Pk Modeling (cli, bundled in Pk Modeling extension)
Jonathan Bronson
- Cleaver CLI (cli, bundled in Cleaver Extension extension)
Josh Cates
- CMRToolkit Automatic Left Atrial Scar (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
- Label Map Smoothing (cli, built-in)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
- Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
Joy Matsui
- DWIConvert (cli, built-in)
Julien Finet
- Cameras (loadable, built-in)
- Colors (loadable, built-in)
- Data (loadable, built-in)
- Double Arrays (loadable, built-in)
- Event Broker
- Image Maker (cli, bundled in Image Maker extension)
- Models (loadable, built-in)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- Scene Performance (scripted, built-in)
- Threshold Scalar Volume (cli, built-in)
- Tractography Display (loadable, built-in)
- Transforms (loadable, built-in)
- Units (loadable, built-in)
- Volume Rendering (loadable, built-in)
- Volumes (loadable, built-in)
Julien Jomier
- Gaussian Blur Image Filter (cli, built-in)
Junichi Tokuda
- Corner Annotation (scripted, bundled in Corner Annotation extension)
- Curve Maker (scripted, bundled in Curve Maker extension)
- Dilate Label (cli, bundled in Erode Dilate Label extension)
- Erode Label (cli, bundled in Erode Dilate Label extension)
- Path Explorer (loadable, bundled in Slicer IGT extension)
- Percutaneous Approach Analysis (scripted, bundled in Percutaneous Approach Analysis extension)
- Volume Reslice Driver (loadable, bundled in Slicer IGT extension)
K
- Dicom Rt Import Plugin
Kent Williams
- BRAINSDWICleanup (cli, built-in)
- BRAINSTransform Convert (cli, built-in)
- Convert VTK (cli, bundled in UKFTractography extension)
- DWIConvert (cli, built-in)
- UKFTractography (cli, bundled in UKFTractography extension)
Kent WIlliams
- BRAINSStrip Rotation (cli, built-in)
Kevin Alex
- Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)
Kevin Wang
- Colors Scalar Bar Self Test
- Contour Comparison (loadable, bundled in Slicer RT extension)
- Contour Morphology (loadable, bundled in Slicer RT extension)
- Contours (loadable, bundled in Slicer RT extension)
- Dicom Rt Export (loadable, bundled in Slicer RT extension)
- Dicom Rt Import (loadable, bundled in Slicer RT extension)
- Dicom Sro Export (scripted, bundled in Slicer RT extension)
- Dicom Sro Import (loadable, bundled in Slicer RT extension)
- Dicom Sro Import Plugin
- Dose Accumulation (loadable, bundled in Slicer RT extension)
- Dose Comparison (loadable, bundled in Slicer RT extension)
- Dose Volume Histogram (loadable, bundled in Slicer RT extension)
- Isodose (loadable, bundled in Slicer RT extension)
- Matlab Commander (cli, bundled in Matlab Bridge extension)
- Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
- Sequence Browser (loadable, bundled in Multidim Data extension)
- Sequences (loadable, bundled in Multidim Data extension)
Kilian Pohl
- Annotations (loadable, built-in)
- Change Tracker (scripted, bundled in Change Tracker extension)
- EMSegment (loadable, built-in)
- EMSegment Command Line (cli, built-in)
- Scene Views (loadable, built-in)
Koichiro Murakami
- Corner Annotation (scripted, bundled in Corner Annotation extension)
- Percutaneous Approach Analysis (scripted, bundled in Percutaneous Approach Analysis extension)
Kyle Sunderl
- Dvh Comparison (scripted, bundled in Slicer RT extension)
l
- Dicom Rt Import Plugin
Lauren Barber
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
Lauren O'Donnell
- Fiber Bundle Label Select (cli, built-in)
- Probe Volume With Model (cli, built-in)
Laurent Chauvin
- Curve Maker (scripted, bundled in Curve Maker extension)
- Dice Computation (loadable, bundled in Dice Computation extension)
- Path Explorer (loadable, bundled in Slicer IGT extension)
- Percutaneous Approach Analysis (scripted, bundled in Percutaneous Approach Analysis extension)
- Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)
Liang-Jia Zhu
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
Liangjia Zhu
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
Luca Antiga
- Centerline Computation (scripted, bundled in VMTK extension)
- Level Set Segmentation (scripted, bundled in VMTK extension)
- Surface Toolbox (scripted, built-in)
- Vesselness Filtering (scripted, bundled in VMTK extension)
Luis G. Torres
- Port Placement (scripted, bundled in Port Placement extension)
Luping Fang
- Gyro Guide (scripted, bundled in Gyro Guide extension)
m
- Dicom Rt Import Plugin
Marc Niethammer
- DWIRician LMMSEFilter (cli, built-in)
Marcel Prastawa prastawa@sci.utah.edu
Mark Scully
- DWIConvert (cli, built-in)
Markus Van Tol
- Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
Martin Styner
- Convert VTK (cli, bundled in UKFTractography extension)
- dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Extract Skeleton (cli, built-in)
- UKFTractography (cli, bundled in UKFTractography extension)
Mason Winsauer
- Apply Matrix (cli, bundled in CMFreg extension)
- Downsize (cli, bundled in CMFreg extension)
- Growing (cli, bundled in CMFreg extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Mask Creation (cli, bundled in CMFreg extension)
- Non Growing (cli, bundled in CMFreg extension)
Matt Lougheed
- Resection Volume (scripted, bundled in Resection Planner extension)
- Volume Clip With Model (scripted, bundled in Volume Clip extension)
Mattea Welch
- Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)
Matthew Holden
- Breach Warning (loadable, bundled in Slicer IGT extension)
- Fiducial Registration Wizard (loadable, bundled in Slicer IGT extension)
- Metafile Importer (loadable, bundled in Multidim Data extension)
- Python Metrics Calculator (scripted, bundled in Perk Tutor extension)
- Sequence Browser (loadable, bundled in Multidim Data extension)
- Sequences (loadable, bundled in Multidim Data extension)
Matthew S. Holden
- Perk Evaluator (loadable, bundled in Perk Tutor extension)
- Transform Recorder (loadable, bundled in Perk Tutor extension)
- Workflow Segmentation (loadable, bundled in Perk Tutor extension)
Matthew Woehlke
- Extension Wizard (scripted, built-in)
Michael Jeulin-Lagarrigue
- Reformat (loadable, built-in)
Minjeong Kim
- IGR3D MABMIS Testing (cli, bundled in MABMIS extension)
- IGR3D MABMIS Training (cli, bundled in MABMIS extension)
Nabgha Fahrat
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
Neuro Image Resarch
- Apply Matrix (cli, bundled in CMFreg extension)
- Downsize (cli, bundled in CMFreg extension)
- Growing (cli, bundled in CMFreg extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Mask Creation (cli, bundled in CMFreg extension)
- Non Growing (cli, bundled in CMFreg extension)
Nicholas Herlambang
- JRC2013Vis
Nick Tustison
- N4ITKBias Field Correction (cli, built-in)
Nicole Aucoin
- ACPCTransform (cli, built-in)
- Add Many Markups Fiducial Test
- Annotations (loadable, built-in)
- Cast Scalar Volume (cli, built-in)
- Colors (loadable, built-in)
- Colors Scalar Bar Self Test
- Data (loadable, built-in)
- Fiducial Layout Switch Bug1914
- Grayscale Model Maker (cli, built-in)
- Markups (loadable, built-in)
- Markups In Compare Viewers Self Test
- Markups In Views Self Test
- Mask Scalar Volume (cli, built-in)
- Merge Models (cli, built-in)
- Model Maker (cli, built-in)
- Models (loadable, built-in)
- Model To Label Map (cli, built-in)
- Neurosurgical Planning Tutorial Markups Self Test
- PETStandard Uptake Value Computation (cli, built-in)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- Reporting (loadable, bundled in Reporting extension)
- Scene Views (loadable, built-in)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
- Threshold Scalar Volume (cli, built-in)
- Volume Rendering Scene Close (scripted, built-in)
- Volumes (loadable, built-in)
Nigel Goh
- Thingiverse Browser (scripted, bundled in Thingiverse Browser extension)
Nikos Chrisochoides
- Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
- Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
- PBNRR (cli, bundled in PBNRR extension)
Olivier Clatz
p
- Dicom Rt Import Plugin
Paolo Zaffino
- Plastimatch Py (loadable, bundled in Slicer RT extension)
Pat Marion
- Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
Paul Mercea
- Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)
Pengdong Xiao
- Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
Peter Black
- Change Tracker (scripted, bundled in Change Tracker extension)
Peter Karasev
- Carrera Slice (loadable, bundled in Carrera Slice extension)
Peter Savadjiev
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
- UKFTractography (cli, bundled in UKFTractography extension)
Pierre Seroul
- Extract Skeleton (cli, built-in)
Pietro Nardelli
- Airway Segmentation CLI (cli, bundled in Airway Segmentation extension)
Please direct questions or suggestions to http://groups.google.com/group/plastimatch
- plastimatch slicer bspline (cli, bundled in Slicer RT extension)
- plastimatch slicer dicomrt export (cli, bundled in Slicer RT extension)
- plastimatch slicer dicomrt import (cli, bundled in Slicer RT extension)
- plastimatch slicer landwarp (cli, bundled in Slicer RT extension)
- plastimatch slicer xformwarp (cli, bundled in Slicer RT extension)
Polina Goll
- EMSegment Command Line (cli, built-in)
Qing Pan
- Gyro Guide (scripted, bundled in Gyro Guide extension)
R
- Dicom Rt Import Plugin
r
- Dicom Rt Import Plugin
Raul San Jose
- Diffusion Tensor Scalar Measurements (cli, built-in)
- DWITo DTIEstimation (cli, built-in)
- Tractography Label Map Seeding (cli, built-in)
Rob MacLeod
- CMRToolkit Automatic Left Atrial Scar (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
- Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
Ron Kikinis
- ACPCTransform (cli, built-in)
- Cast Scalar Volume (cli, built-in)
- Change Tracker (scripted, bundled in Change Tracker extension)
- Crop Volume (loadable, built-in)
- Mask Scalar Volume (cli, built-in)
- Merge Models (cli, built-in)
- Model Maker (cli, built-in)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- N4ITKBias Field Correction (cli, built-in)
- PETStandard Uptake Value Computation (cli, built-in)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- Robust Statistics Segmenter (cli, built-in)
- Surface Toolbox (scripted, built-in)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
- Threshold Scalar Volume (cli, built-in)
- View Controllers (loadable, built-in)
- Volume Rendering (loadable, built-in)
Ross Whitaker
- Label Map Smoothing (cli, built-in)
Ruifeng Chen
- Gyro Guide (scripted, bundled in Gyro Guide extension)
S
- Dicom Rt Import Plugin
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
Salma Bengali
- CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
- LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
- Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)
Sam Song
Santiago Aja Fern
- DWIJoint Rician LMMSEFilter (cli, built-in)
- DWIRician LMMSEFilter (cli, built-in)
- DWIUnbiased Non Local Means Filter (cli, built-in)
Sebastien Barré
- Cameras (loadable, built-in)
Sebastien Barre
- EMSegment Command Line (cli, built-in)
Shigeyuki Naka
- Corner Annotation (scripted, bundled in Corner Annotation extension)
Soichiro Tani
- Corner Annotation (scripted, bundled in Corner Annotation extension)
Sonia Pujol
- Dice Computation (loadable, bundled in Dice Computation extension)
- DTIexport (cli, built-in)
- DTIimport (cli, built-in)
Stefan Lienhard
- Convert VTK (cli, bundled in UKFTractography extension)
- UKFTractography (cli, bundled in UKFTractography extension)
Stephen Aylward
- Extract Skeleton (cli, built-in)
- Gaussian Blur Image Filter (cli, built-in)
Stephen R Aylward
- Expert Automated Registration (cli, built-in)
Steve Pieper
- Atlas Tests
- Binary Watershed Effect (scripted, bundled in IASEM extension)
- Centerline Computation (scripted, bundled in VMTK extension)
- Compare Volumes (scripted, bundled in CMFreg extension)
- Data Probe (scripted, built-in)
- DICOM (scripted, built-in)
- DICOMDiffusion Volume Plugin
- DICOMLongitudinal PETCTPlugin
- DICOMScalar Volume Plugin
- DICOMSlicer Data Bundle Plugin
- Endoscopy (scripted, built-in)
- fiber visibility crash2438
- Fiber Bundle To Label Map (scripted, built-in)
- label Toggle Bug2049
- Landmark Registration (scripted, bundled in CMFreg extension)
- Level Set Segmentation (scripted, bundled in VMTK extension)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- Performance Tests
- Reporting (loadable, bundled in Reporting extension)
- RSNA2012Prostate Demo
- RSNAQuant Tutorial
- RSNAVis Tutorial
- Sample Data (scripted, built-in)
- scene Import2428
- Self Tests
- Simple Filters (scripted, built-in)
- slicer Close Crash Bug2590
- Slicer MRBTest
- Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
- Threshold Threading Test
- Vector To Scalar Volume (scripted, built-in)
- Vesselness Filtering (scripted, bundled in VMTK extension)
- View Controllers (loadable, built-in)
- Volumes (loadable, built-in)
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
Sunil Kumar
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
Sylvain Bouix
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
Sylvain Gouttard
- dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
t
- Dicom Rt Import Plugin
Tamas Ungi
- Breach Warning (loadable, bundled in Slicer IGT extension)
- Breach Warning Self Test
- Collect Fiducials (loadable, bundled in Slicer IGT extension)
- Create Models (loadable, bundled in Slicer IGT extension)
- Fiducial Registration Wizard (loadable, bundled in Slicer IGT extension)
- Fiducials To Model Registration (scripted, bundled in Slicer IGT extension)
- Open IGTLink Remote (loadable, bundled in Slicer IGT extension)
- Perk Evaluator (loadable, bundled in Perk Tutor extension)
- Pivot Calibration (loadable, bundled in Slicer IGT extension)
- Plus Remote (scripted, bundled in Slicer IGT extension)
- Python Metrics Calculator (scripted, bundled in Perk Tutor extension)
- Scoliosis Monitoring (scripted, bundled in Scoliosis extension)
- Spinal Curvature Measurement (scripted, bundled in Scoliosis extension)
- Transform Fusion (loadable, bundled in Slicer IGT extension)
- Transform Recorder (loadable, bundled in Perk Tutor extension)
- Ultrasound Snapshots (loadable, bundled in Slicer IGT extension)
- Volume Reslice Driver (loadable, bundled in Slicer IGT extension)
- Workflow Segmentation (loadable, bundled in Perk Tutor extension)
the University of North Carolina at Chapel Hill
- Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
Tina Kapur
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
Tobias Penzkofer
Tohru Tani
- Corner Annotation (scripted, bundled in Corner Annotation extension)
UNC Medical School
- Apply Matrix (cli, bundled in CMFreg extension)
- Downsize (cli, bundled in CMFreg extension)
- Growing (cli, bundled in CMFreg extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Mask Creation (cli, bundled in CMFreg extension)
- Non Growing (cli, bundled in CMFreg extension)
UofM School Of Dentistry
UofM School of Dentistry
- Apply Matrix (cli, bundled in CMFreg extension)
- Downsize (cli, bundled in CMFreg extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Mask Creation (cli, bundled in CMFreg extension)
- Non Growing (cli, bundled in CMFreg extension)
Vince Magnotta
- DWIConvert (cli, built-in)
Vincent A. Magnotta
- BRAINSLabel Stats (cli, built-in)
Vincent Magnotta
- BRAINSResample (cli, built-in)
Vinicius Boen
- Apply Matrix (cli, bundled in CMFreg extension)
- Downsize (cli, bundled in CMFreg extension)
- Growing (cli, bundled in CMFreg extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Mask Creation (cli, bundled in CMFreg extension)
- Non Growing (cli, bundled in CMFreg extension)
- Surface Registration (scripted, bundled in CMFreg extension)
Vivek Narayan
- Heterogeneity CAD (scripted, bundled in Open CAD extension)
- Segment CAD (scripted, bundled in Open CAD extension)
Wendy Plesniak
- Annotations (loadable, built-in)
- PETStandard Uptake Value Computation (cli, built-in)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- Scene Views (loadable, built-in)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
- View Controllers (loadable, built-in)
- Welcome (loadable, built-in)
Xiaodong Tao
- DWIConvert (cli, built-in)
- Model To Label Map (cli, built-in)
Xiaofeng Liu
- IGR3D MABMIS Testing (cli, bundled in MABMIS extension)
- IGR3D MABMIS Training (cli, bundled in MABMIS extension)
Xiaojun Chen
y Wells
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
Yanling Liu
- Volume Rendering (loadable, built-in)
Yi Gao
- i Gyne (scripted, bundled in i Gyne extension)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
- Robust Statistics Segmenter (cli, built-in)
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
Yinglin Lee
- Test Grid Transform Registration (cli, built-in)
Yingxuan Zhu
- Pk Modeling (cli, bundled in Pk Modeling extension)
Yinpeng Li
- Convert VTK (cli, bundled in UKFTractography extension)
- UKFTractography (cli, bundled in UKFTractography extension)
Yixun Liu
- Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
- Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
- PBNRR (cli, bundled in PBNRR extension)
Yogesh Rathi
- Convert VTK (cli, bundled in UKFTractography extension)
- UKFTractography (cli, bundled in UKFTractography extension)
Yong Zhang
- Annotations (loadable, built-in)
Yumin Yuan
- EMSegment Command Line (cli, built-in)
Yundi Shi
- Convert VTK (cli, bundled in UKFTractography extension)
- dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
- UKFTractography (cli, bundled in UKFTractography extension)
Modules by type
3 types:
cli
- ABC (cli, bundled in ABC extension)
- ACPCTransform (cli, built-in)
- Add Scalar Volumes (cli, built-in)
- Airway Segmentation CLI (cli, bundled in Airway Segmentation extension)
- Apply Matrix (cli, bundled in CMFreg extension)
- Bin Shrink (cli, bundled in IASEM extension)
- Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
- BRAINSDemon Warp (cli, built-in)
- BRAINSDWICleanup (cli, built-in)
- BRAINSFit (cli, built-in)
- BRAINSLabel Stats (cli, built-in)
- BRAINSResample (cli, built-in)
- BRAINSResize (cli, built-in)
- BRAINSROIAuto (cli, built-in)
- BRAINSStrip Rotation (cli, built-in)
- BRAINSTransform Convert (cli, built-in)
- BSpline To Deformation Field (cli, built-in)
- Cast Scalar Volume (cli, built-in)
- Checker Board Filter (cli, built-in)
- Cleaver CLI (cli, bundled in Cleaver Extension extension)
- CLIROITest (cli, built-in)
- CMRToolkit Automatic Left Atrial Scar (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
- Convert VTK (cli, bundled in UKFTractography extension)
- Create DICOMSeries (cli, built-in)
- Curvature Anisotropic Diffusion (cli, built-in)
- Diffusion Tensor Scalar Measurements (cli, built-in)
- Diffusion Tensor Test (cli, built-in)
- Diffusion Weighted Volume Masking (cli, built-in)
- Dilate Label (cli, bundled in Erode Dilate Label extension)
- Downsize (cli, bundled in CMFreg extension)
- DTIAtlas Fiber Analyzer (cli, bundled in DTIAtlas Fiber Analyzer extension)
- DTIexport (cli, built-in)
- DTIimport (cli, built-in)
- dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
- DWIConvert (cli, built-in)
- DWIJoint Rician LMMSEFilter (cli, built-in)
- DWIRician LMMSEFilter (cli, built-in)
- DWITo DTIEstimation (cli, built-in)
- DWIUnbiased Non Local Means Filter (cli, built-in)
- EMSegment Command Line (cli, built-in)
- EMSegment Transform To New Format (cli, built-in)
- Erode Label (cli, bundled in Erode Dilate Label extension)
- Execution Model Tour (cli, built-in)
- Expert Automated Registration (cli, built-in)
- Extract Skeleton (cli, built-in)
- Fiber Bundle Label Select (cli, built-in)
- Fiber Compare (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Fiducial Registration (cli, built-in)
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
- Gaussian Blur Image Filter (cli, built-in)
- Gradient Anisotropic Diffusion (cli, built-in)
- Grayscale Fill Hole Image Filter (cli, built-in)
- Grayscale Grind Peak Image Filter (cli, built-in)
- Grayscale Model Maker (cli, built-in)
- Growing (cli, bundled in CMFreg extension)
- Histogram Matching (cli, built-in)
- IASEMImport (cli, bundled in IASEM extension)
- IASEMImport Series (cli, bundled in IASEM extension)
- IGR3D MABMIS Testing (cli, bundled in MABMIS extension)
- IGR3D MABMIS Training (cli, bundled in MABMIS extension)
- Image Label Combine (cli, built-in)
- Image Maker (cli, bundled in Image Maker extension)
- Intensity Difference Metric (cli, bundled in Change Tracker extension)
- Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Label Map Smoothing (cli, built-in)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- Mask Creation (cli, bundled in CMFreg extension)
- Mask Scalar Volume (cli, built-in)
- Matlab Commander (cli, bundled in Matlab Bridge extension)
- Median Image Filter (cli, built-in)
- Merge Models (cli, built-in)
- Merge Stat With Fiber (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
- Mesh To Label Map (cli, bundled in Mesh To Label Map extension)
- Model Maker (cli, built-in)
- Model To Label Map (cli, built-in)
- Multiply Scalar Volumes (cli, built-in)
- N4ITKBias Field Correction (cli, built-in)
- Non Growing (cli, bundled in CMFreg extension)
- Orient Scalar Volume (cli, built-in)
- Otsu Threshold Image Filter (cli, built-in)
- PBNRR (cli, bundled in PBNRR extension)
- Perform Metric Test (cli, built-in)
- PETStandard Uptake Value Computation (cli, built-in)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- Pk Modeling (cli, bundled in Pk Modeling extension)
- plastimatch slicer bspline (cli, bundled in Slicer RT extension)
- plastimatch slicer dicomrt export (cli, bundled in Slicer RT extension)
- plastimatch slicer dicomrt import (cli, bundled in Slicer RT extension)
- plastimatch slicer landwarp (cli, bundled in Slicer RT extension)
- plastimatch slicer xformwarp (cli, bundled in Slicer RT extension)
- Probe Volume With Model (cli, built-in)
- Resample DTIVolume (cli, built-in)
- Resample Scalar Vector DWIVolume (cli, built-in)
- Resample Scalar Volume (cli, built-in)
- Robust Statistics Segmenter (cli, built-in)
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
- Simple Region Growing Segmentation (cli, built-in)
- Sobolev Segmenter (cli, bundled in Sobolev Segmenter extension)
- Spacing Aware Curvature Diffusion (cli, bundled in IASEM extension)
- Subtract Scalar Volumes (cli, built-in)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
- Swiss Skull Stripper (cli, bundled in Swiss Skull Stripper extension)
- Test Grid Transform Registration (cli, built-in)
- Threshold Scalar Volume (cli, built-in)
- Tractography Label Map Seeding (cli, built-in)
- UKFTractography (cli, bundled in UKFTractography extension)
- VBRAINSDemon Warp (cli, built-in)
- Voting Binary Hole Filling Image Filter (cli, built-in)
loadable
- Annotations (loadable, built-in)
- Beams (loadable, bundled in Slicer RT extension)
- Breach Warning (loadable, bundled in Slicer IGT extension)
- Cameras (loadable, built-in)
- Carrera Slice (loadable, bundled in Carrera Slice extension)
- Collect Fiducials (loadable, bundled in Slicer IGT extension)
- Colors (loadable, built-in)
- Contour Comparison (loadable, bundled in Slicer RT extension)
- Contour Morphology (loadable, bundled in Slicer RT extension)
- Contours (loadable, bundled in Slicer RT extension)
- Create Models (loadable, bundled in Slicer IGT extension)
- Crop Volume (loadable, built-in)
- Data (loadable, built-in)
- Data Store (loadable, built-in)
- Dice Computation (loadable, bundled in Dice Computation extension)
- Dicom Rt Export (loadable, bundled in Slicer RT extension)
- Dicom Rt Import (loadable, bundled in Slicer RT extension)
- Dicom Sro Import (loadable, bundled in Slicer RT extension)
- Dose Accumulation (loadable, bundled in Slicer RT extension)
- Dose Comparison (loadable, bundled in Slicer RT extension)
- Dose Volume Histogram (loadable, bundled in Slicer RT extension)
- Double Arrays (loadable, built-in)
- EMSegment (loadable, built-in)
- EMSegment Quick (loadable, built-in)
- Fast Grow Cut (loadable, bundled in Fast Grow Cut Effect extension)
- Fast Grow Cut Segmenter (loadable, bundled in Carrera Slice extension)
- Fiducial Registration Wizard (loadable, bundled in Slicer IGT extension)
- Gel Dosimetry Analysis Algo (loadable, bundled in Gel Dosimetry Analysis extension)
- Isodose (loadable, bundled in Slicer RT extension)
- Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)
- Markups (loadable, built-in)
- Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
- Metafile Importer (loadable, bundled in Multidim Data extension)
- Models (loadable, built-in)
- Multi Volume Explorer (loadable, built-in)
- Open IGTLink IF (loadable, built-in)
- Open IGTLink Remote (loadable, bundled in Slicer IGT extension)
- Path Explorer (loadable, bundled in Slicer IGT extension)
- Perk Evaluator (loadable, bundled in Perk Tutor extension)
- Pivot Calibration (loadable, bundled in Slicer IGT extension)
- Planar Image (loadable, bundled in Slicer RT extension)
- Plastimatch Py (loadable, bundled in Slicer RT extension)
- Reformat (loadable, built-in)
- Reporting (loadable, bundled in Reporting extension)
- Scene Views (loadable, built-in)
- Sequence Browser (loadable, bundled in Multidim Data extension)
- Sequences (loadable, bundled in Multidim Data extension)
- Subject Hierarchy (loadable, built-in)
- Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)
- Tractography Display (loadable, built-in)
- Tractography Interactive Seeding (loadable, built-in)
- Transform Fusion (loadable, bundled in Slicer IGT extension)
- Transform Recorder (loadable, bundled in Perk Tutor extension)
- Transforms (loadable, built-in)
- Ultrasound Snapshots (loadable, bundled in Slicer IGT extension)
- Units (loadable, built-in)
- Vff File Reader (loadable, bundled in Slicer RT extension)
- View Controllers (loadable, built-in)
- Volume Rendering (loadable, built-in)
- Volume Reslice Driver (loadable, bundled in Slicer IGT extension)
- Volumes (loadable, built-in)
- Welcome (loadable, built-in)
- Workflow Segmentation (loadable, bundled in Perk Tutor extension)
scripted
- Binary Watershed Effect (scripted, bundled in IASEM extension)
- Cardiac Agatston Measures (scripted, bundled in Cardiac Agaston Measures extension)
- Centerline Computation (scripted, bundled in VMTK extension)
- Change Tracker (scripted, bundled in Change Tracker extension)
- Charting (scripted, built-in)
- CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
- Compare Volumes (scripted, bundled in CMFreg extension)
- Corner Annotation (scripted, bundled in Corner Annotation extension)
- Curve Maker (scripted, bundled in Curve Maker extension)
- Data Probe (scripted, built-in)
- DICOM (scripted, built-in)
- DICOM2Full Brain Tractography (scripted, built-in)
- Dicom Sro Export (scripted, bundled in Slicer RT extension)
- Double Threshold Effect (scripted, bundled in IASEM extension)
- Dvh Comparison (scripted, bundled in Slicer RT extension)
- Endoscopy (scripted, built-in)
- Extension Wizard (scripted, built-in)
- Fiber Bundle To Label Map (scripted, built-in)
- Fiducials To Model Registration (scripted, bundled in Slicer IGT extension)
- Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)
- Gyro Guide (scripted, bundled in Gyro Guide extension)
- Heterogeneity CAD (scripted, bundled in Open CAD extension)
- i Gyne (scripted, bundled in i Gyne extension)
- KUtil (scripted, bundled in Carrera Slice extension)
- Label Object Statistics (scripted, bundled in IASEM extension)
- Label To DICOMSEGConverter (scripted, bundled in Reporting extension)
- Landmark Registration (scripted, bundled in CMFreg extension)
- LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
- Level Set Segmentation (scripted, bundled in VMTK extension)
- Multi Volume Importer (scripted, built-in)
- Needle Finder (scripted, bundled in Needle Finder extension)
- Percutaneous Approach Analysis (scripted, bundled in Percutaneous Approach Analysis extension)
- Plm Register (scripted, bundled in Slicer RT extension)
- Plus Remote (scripted, bundled in Slicer IGT extension)
- Port Placement (scripted, bundled in Port Placement extension)
- Py Dev Remote Debug (scripted, bundled in Py Dev Remote Debug extension)
- Python Metrics Calculator (scripted, bundled in Perk Tutor extension)
- Resection Volume (scripted, bundled in Resection Planner extension)
- Sample Data (scripted, built-in)
- Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)
- Scene Performance (scripted, built-in)
- Scoliosis Monitoring (scripted, bundled in Scoliosis extension)
- Segment CAD (scripted, bundled in Open CAD extension)
- Simple Filters (scripted, built-in)
- Slice Link Logic (scripted, built-in)
- Slicer4Minute (scripted, built-in)
- Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
- Spinal Curvature Measurement (scripted, bundled in Scoliosis extension)
- Surface Registration (scripted, bundled in CMFreg extension)
- Surface Toolbox (scripted, built-in)
- TCIABrowser (scripted, bundled in TCIABrowser extension)
- Thingiverse Browser (scripted, bundled in Thingiverse Browser extension)
- Vector To Scalar Volume (scripted, built-in)
- Vesselness Filtering (scripted, bundled in VMTK extension)
- Volume Clip With Model (scripted, bundled in Volume Clip extension)
- Volume Clip With Roi (scripted, bundled in Volume Clip extension)
- Volume Rendering Scene Close (scripted, built-in)
- Window Level Effect (scripted, bundled in Window Level Effect extension)
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
Modules by extension
55 extensions:
- ABC
- Airway Segmentation
- builtin
- Cardiac MRI Toolkit
- Cardiac Agaston Measures
- Carrera Slice
- CBC 3D I2MConversion
- Change Tracker
- Cleaver Extension
- CMFreg
- Corner Annotation
- Curve Maker
- Dice Computation
- DTIAtlas Fiber Analyzer
- Erode Dilate Label
- Fast Grow Cut Effect
- Finsler Tractography
- Gel Dosimetry Analysis
- Gyro Guide
- IASEM
- i Gyne
- Image Maker
- Intensity Segmenter
- LAScar Segmenter
- Longitudinal PETCT
- MABMIS
- Matlab Bridge
- Mesh To Label Map
- Multidim Data
- Needle Finder
- Open CAD
- PBNRR
- Percutaneous Approach Analysis
- Perk Tutor
- PETDICOMExtension
- Pk Modeling
- Port Placement
- Py Dev Remote Debug
- Reporting
- Resection Planner
- Scoliosis
- Segmentation Aided Registration
- VMTK
- Slicer IGT
- Slicer RT
- Slicer To Kiwi Exporter
- Sobolev Segmenter
- Swiss Skull Stripper
- TCIABrowser
- Thingiverse Browser
- Tracker Stabilizer
- UKFTractography
- Volume Clip
- Window Level Effect
- XNATSlicer
ABC
AirwaySegmentation
- Airway Segmentation CLI (cli, bundled in Airway Segmentation extension)
builtin
- ACPCTransform (cli, built-in)
- Add Scalar Volumes (cli, built-in)
- Annotations (loadable, built-in)
- BRAINSDemon Warp (cli, built-in)
- BRAINSDWICleanup (cli, built-in)
- BRAINSFit (cli, built-in)
- BRAINSLabel Stats (cli, built-in)
- BRAINSResample (cli, built-in)
- BRAINSResize (cli, built-in)
- BRAINSROIAuto (cli, built-in)
- BRAINSStrip Rotation (cli, built-in)
- BRAINSTransform Convert (cli, built-in)
- BSpline To Deformation Field (cli, built-in)
- Cameras (loadable, built-in)
- Cast Scalar Volume (cli, built-in)
- Charting (scripted, built-in)
- Checker Board Filter (cli, built-in)
- CLIROITest (cli, built-in)
- Colors (loadable, built-in)
- Create DICOMSeries (cli, built-in)
- Crop Volume (loadable, built-in)
- Curvature Anisotropic Diffusion (cli, built-in)
- Data (loadable, built-in)
- Data Probe (scripted, built-in)
- Data Store (loadable, built-in)
- DICOM (scripted, built-in)
- DICOM2Full Brain Tractography (scripted, built-in)
- Diffusion Tensor Scalar Measurements (cli, built-in)
- Diffusion Tensor Test (cli, built-in)
- Diffusion Weighted Volume Masking (cli, built-in)
- Double Arrays (loadable, built-in)
- DTIexport (cli, built-in)
- DTIimport (cli, built-in)
- DWIConvert (cli, built-in)
- DWIJoint Rician LMMSEFilter (cli, built-in)
- DWIRician LMMSEFilter (cli, built-in)
- DWITo DTIEstimation (cli, built-in)
- DWIUnbiased Non Local Means Filter (cli, built-in)
- EMSegment (loadable, built-in)
- EMSegment Command Line (cli, built-in)
- EMSegment Quick (loadable, built-in)
- EMSegment Transform To New Format (cli, built-in)
- Endoscopy (scripted, built-in)
- Execution Model Tour (cli, built-in)
- Expert Automated Registration (cli, built-in)
- Extension Wizard (scripted, built-in)
- Extract Skeleton (cli, built-in)
- Fiber Bundle Label Select (cli, built-in)
- Fiber Bundle To Label Map (scripted, built-in)
- Fiducial Registration (cli, built-in)
- Gaussian Blur Image Filter (cli, built-in)
- Gradient Anisotropic Diffusion (cli, built-in)
- Grayscale Fill Hole Image Filter (cli, built-in)
- Grayscale Grind Peak Image Filter (cli, built-in)
- Grayscale Model Maker (cli, built-in)
- Histogram Matching (cli, built-in)
- Image Label Combine (cli, built-in)
- Label Map Smoothing (cli, built-in)
- Markups (loadable, built-in)
- Mask Scalar Volume (cli, built-in)
- Median Image Filter (cli, built-in)
- Merge Models (cli, built-in)
- Model Maker (cli, built-in)
- Models (loadable, built-in)
- Model To Label Map (cli, built-in)
- Multiply Scalar Volumes (cli, built-in)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- N4ITKBias Field Correction (cli, built-in)
- Open IGTLink IF (loadable, built-in)
- Orient Scalar Volume (cli, built-in)
- Otsu Threshold Image Filter (cli, built-in)
- Perform Metric Test (cli, built-in)
- PETStandard Uptake Value Computation (cli, built-in)
- Probe Volume With Model (cli, built-in)
- Reformat (loadable, built-in)
- Resample DTIVolume (cli, built-in)
- Resample Scalar Vector DWIVolume (cli, built-in)
- Resample Scalar Volume (cli, built-in)
- Robust Statistics Segmenter (cli, built-in)
- Sample Data (scripted, built-in)
- Scene Performance (scripted, built-in)
- Scene Views (loadable, built-in)
- Simple Filters (scripted, built-in)
- Simple Region Growing Segmentation (cli, built-in)
- Slice Link Logic (scripted, built-in)
- Slicer4Minute (scripted, built-in)
- Subject Hierarchy (loadable, built-in)
- Subtract Scalar Volumes (cli, built-in)
- Surface Toolbox (scripted, built-in)
- Test Grid Transform Registration (cli, built-in)
- Threshold Scalar Volume (cli, built-in)
- Tractography Display (loadable, built-in)
- Tractography Interactive Seeding (loadable, built-in)
- Tractography Label Map Seeding (cli, built-in)
- Transforms (loadable, built-in)
- Units (loadable, built-in)
- VBRAINSDemon Warp (cli, built-in)
- Vector To Scalar Volume (scripted, built-in)
- View Controllers (loadable, built-in)
- Volume Rendering (loadable, built-in)
- Volume Rendering Scene Close (scripted, built-in)
- Volumes (loadable, built-in)
- Voting Binary Hole Filling Image Filter (cli, built-in)
- Welcome (loadable, built-in)
Cardiac_MRI_Toolkit
- CMRToolkit Automatic Left Atrial Scar (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
- CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
- LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
- Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)
CardiacAgastonMeasures
- Cardiac Agatston Measures (scripted, bundled in Cardiac Agaston Measures extension)
CarreraSlice
- Carrera Slice (loadable, bundled in Carrera Slice extension)
- Fast Grow Cut Segmenter (loadable, bundled in Carrera Slice extension)
- KUtil (scripted, bundled in Carrera Slice extension)
CBC_3D_I2MConversion
- Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
- Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
ChangeTracker
- Change Tracker (scripted, bundled in Change Tracker extension)
- Intensity Difference Metric (cli, bundled in Change Tracker extension)
CleaverExtension
- Cleaver CLI (cli, bundled in Cleaver Extension extension)
CMFreg
- Apply Matrix (cli, bundled in CMFreg extension)
- Compare Volumes (scripted, bundled in CMFreg extension)
- Downsize (cli, bundled in CMFreg extension)
- Growing (cli, bundled in CMFreg extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Landmark Registration (scripted, bundled in CMFreg extension)
- Mask Creation (cli, bundled in CMFreg extension)
- Non Growing (cli, bundled in CMFreg extension)
- Surface Registration (scripted, bundled in CMFreg extension)
CornerAnnotation
- Corner Annotation (scripted, bundled in Corner Annotation extension)
CurveMaker
- Curve Maker (scripted, bundled in Curve Maker extension)
DiceComputation
- Dice Computation (loadable, bundled in Dice Computation extension)
DTIAtlasFiberAnalyzer
- DTIAtlas Fiber Analyzer (cli, bundled in DTIAtlas Fiber Analyzer extension)
- dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Fiber Compare (cli, bundled in DTIAtlas Fiber Analyzer extension)
- Merge Stat With Fiber (cli, bundled in DTIAtlas Fiber Analyzer extension)
ErodeDilateLabel
- Dilate Label (cli, bundled in Erode Dilate Label extension)
- Erode Label (cli, bundled in Erode Dilate Label extension)
FastGrowCutEffect
- Fast Grow Cut (loadable, bundled in Fast Grow Cut Effect extension)
FinslerTractography
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
GelDosimetryAnalysis
- Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)
- Gel Dosimetry Analysis Algo (loadable, bundled in Gel Dosimetry Analysis extension)
GyroGuide
- Gyro Guide (scripted, bundled in Gyro Guide extension)
IASEM
- Binary Watershed Effect (scripted, bundled in IASEM extension)
- Bin Shrink (cli, bundled in IASEM extension)
- Double Threshold Effect (scripted, bundled in IASEM extension)
- IASEMImport (cli, bundled in IASEM extension)
- IASEMImport Series (cli, bundled in IASEM extension)
- Label Object Statistics (scripted, bundled in IASEM extension)
- Spacing Aware Curvature Diffusion (cli, bundled in IASEM extension)
iGyne
ImageMaker
- Image Maker (cli, bundled in Image Maker extension)
IntensitySegmenter
- Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
LAScarSegmenter
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
LongitudinalPETCT
- Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
MABMIS
- IGR3D MABMIS Testing (cli, bundled in MABMIS extension)
- IGR3D MABMIS Training (cli, bundled in MABMIS extension)
MatlabBridge
- Matlab Commander (cli, bundled in Matlab Bridge extension)
- Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
MeshToLabelMap
- Mesh To Label Map (cli, bundled in Mesh To Label Map extension)
MultidimData
- Metafile Importer (loadable, bundled in Multidim Data extension)
- Sequence Browser (loadable, bundled in Multidim Data extension)
- Sequences (loadable, bundled in Multidim Data extension)
NeedleFinder
- Needle Finder (scripted, bundled in Needle Finder extension)
OpenCAD
- Heterogeneity CAD (scripted, bundled in Open CAD extension)
- Segment CAD (scripted, bundled in Open CAD extension)
PBNRR
PercutaneousApproachAnalysis
- Percutaneous Approach Analysis (scripted, bundled in Percutaneous Approach Analysis extension)
PerkTutor
- Perk Evaluator (loadable, bundled in Perk Tutor extension)
- Python Metrics Calculator (scripted, bundled in Perk Tutor extension)
- Transform Recorder (loadable, bundled in Perk Tutor extension)
- Workflow Segmentation (loadable, bundled in Perk Tutor extension)
PETDICOMExtension
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
PkModeling
- Pk Modeling (cli, bundled in Pk Modeling extension)
PortPlacement
- Port Placement (scripted, bundled in Port Placement extension)
PyDevRemoteDebug
- Py Dev Remote Debug (scripted, bundled in Py Dev Remote Debug extension)
Reporting
- Label To DICOMSEGConverter (scripted, bundled in Reporting extension)
- Reporting (loadable, bundled in Reporting extension)
ResectionPlanner
- Resection Volume (scripted, bundled in Resection Planner extension)
Scoliosis
- Scoliosis Monitoring (scripted, bundled in Scoliosis extension)
- Spinal Curvature Measurement (scripted, bundled in Scoliosis extension)
SegmentationAidedRegistration
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
SlicerExtension-VMTK
- Centerline Computation (scripted, bundled in VMTK extension)
- Level Set Segmentation (scripted, bundled in VMTK extension)
- Vesselness Filtering (scripted, bundled in VMTK extension)
SlicerIGT
- Breach Warning (loadable, bundled in Slicer IGT extension)
- Collect Fiducials (loadable, bundled in Slicer IGT extension)
- Create Models (loadable, bundled in Slicer IGT extension)
- Fiducial Registration Wizard (loadable, bundled in Slicer IGT extension)
- Fiducials To Model Registration (scripted, bundled in Slicer IGT extension)
- Open IGTLink Remote (loadable, bundled in Slicer IGT extension)
- Path Explorer (loadable, bundled in Slicer IGT extension)
- Pivot Calibration (loadable, bundled in Slicer IGT extension)
- Plus Remote (scripted, bundled in Slicer IGT extension)
- Transform Fusion (loadable, bundled in Slicer IGT extension)
- Ultrasound Snapshots (loadable, bundled in Slicer IGT extension)
- Volume Reslice Driver (loadable, bundled in Slicer IGT extension)
SlicerRT
- Beams (loadable, bundled in Slicer RT extension)
- Contour Comparison (loadable, bundled in Slicer RT extension)
- Contour Morphology (loadable, bundled in Slicer RT extension)
- Contours (loadable, bundled in Slicer RT extension)
- Dicom Rt Export (loadable, bundled in Slicer RT extension)
- Dicom Rt Import (loadable, bundled in Slicer RT extension)
- Dicom Sro Export (scripted, bundled in Slicer RT extension)
- Dicom Sro Import (loadable, bundled in Slicer RT extension)
- Dose Accumulation (loadable, bundled in Slicer RT extension)
- Dose Comparison (loadable, bundled in Slicer RT extension)
- Dose Volume Histogram (loadable, bundled in Slicer RT extension)
- Dvh Comparison (scripted, bundled in Slicer RT extension)
- Isodose (loadable, bundled in Slicer RT extension)
- Planar Image (loadable, bundled in Slicer RT extension)
- plastimatch slicer bspline (cli, bundled in Slicer RT extension)
- plastimatch slicer dicomrt export (cli, bundled in Slicer RT extension)
- plastimatch slicer dicomrt import (cli, bundled in Slicer RT extension)
- plastimatch slicer landwarp (cli, bundled in Slicer RT extension)
- plastimatch slicer xformwarp (cli, bundled in Slicer RT extension)
- Plastimatch Py (loadable, bundled in Slicer RT extension)
- Plm Register (scripted, bundled in Slicer RT extension)
- Vff File Reader (loadable, bundled in Slicer RT extension)
SlicerToKiwiExporter
- Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
SobolevSegmenter
- Sobolev Segmenter (cli, bundled in Sobolev Segmenter extension)
SwissSkullStripper
- Swiss Skull Stripper (cli, bundled in Swiss Skull Stripper extension)
TCIABrowser
- TCIABrowser (scripted, bundled in TCIABrowser extension)
ThingiverseBrowser
- Thingiverse Browser (scripted, bundled in Thingiverse Browser extension)
TrackerStabilizer
- Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)
UKFTractography
- Convert VTK (cli, bundled in UKFTractography extension)
- UKFTractography (cli, bundled in UKFTractography extension)
VolumeClip
- Volume Clip With Model (scripted, bundled in Volume Clip extension)
- Volume Clip With Roi (scripted, bundled in Volume Clip extension)
WindowLevelEffect
- Window Level Effect (scripted, bundled in Window Level Effect extension)
XNATSlicer
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
Extensions by name
54 extensions:
- ABC
- Airway Segmentation
- Cardiac MRI Toolkit
- Cardiac Agaston Measures
- Carrera Slice
- CBC 3D I2MConversion
- Change Tracker
- Cleaver Extension
- CMFreg
- Corner Annotation
- Curve Maker
- Dice Computation
- DTIAtlas Fiber Analyzer
- Erode Dilate Label
- Fast Grow Cut Effect
- Finsler Tractography
- Gel Dosimetry Analysis
- Gyro Guide
- IASEM
- i Gyne
- Image Maker
- Intensity Segmenter
- LAScar Segmenter
- Longitudinal PETCT
- MABMIS
- Matlab Bridge
- Mesh To Label Map
- Multidim Data
- Needle Finder
- Open CAD
- PBNRR
- Percutaneous Approach Analysis
- Perk Tutor
- PETDICOMExtension
- Pk Modeling
- Port Placement
- Py Dev Remote Debug
- Reporting
- Resection Planner
- Scoliosis
- Segmentation Aided Registration
- VMTK
- Slicer IGT
- Slicer RT
- Slicer To Kiwi Exporter
- Sobolev Segmenter
- Swiss Skull Stripper
- TCIABrowser
- Thingiverse Browser
- Tracker Stabilizer
- UKFTractography
- Volume Clip
- Window Level Effect
- XNATSlicer
Extensions by category
25 categories:
- Cardiac
- Cardiac MRI toolkit
- Converters
- Developer Tools
- Diffusion
- Editor Effects
- Exporter
- Filtering
- IGT
- Informatics
- Mesh Generation
- Microscopy
- Multidimensional data
- Quantification
- Radiotherapy
- Registration
- Remote
- Scoliosis
- Segmentation
- Shape Analysis
- Tractography
- Training
- Utilities
- Vascular Modeling Toolkit
- Wizards
Cardiac
Cardiac MRI toolkit
Converters
Developer Tools
Diffusion
Editor Effects
Exporter
Filtering
Morphology
IGT
- Port Placement
- Gyro Guide
- Corner Annotation
- Percutaneous Approach Analysis
- Needle Finder
- Slicer IGT
- Tracker Stabilizer
- i Gyne
- Resection Planner
Informatics
Mesh Generation
Microscopy
Multidimensional data
Quantification
Radiotherapy
Registration
Remote
Scoliosis
Segmentation
- Airway Segmentation
- Open CAD
- Swiss Skull Stripper
- Carrera Slice
- LAScar Segmenter
- Intensity Segmenter
- MABMIS
- ABC
- Sobolev Segmenter
- Fast Grow Cut Effect
- Volume Clip
Shape Analysis
Tractography
Training
Utilities
Vascular Modeling Toolkit
Wizards
Extensions by contributing organization
54 contributing organizations:
- Asclepios INRIA) and Nikos Chrisochoides (CRTC
- Boston Childrens Hospital
- Brigham and Women's Hospital
- BWH
- BWH & MGH
- BWH, SPL
- BWH/UAB
- CARMA
- College of Information Engineering, Zhejiang University of Technology, Hangzhou, China
- Crisalix
- CRTC
- Department of Neurosurgery, PLA General Hospital, Beijing, China
- Department of Orthodontics, UNC
- GE
- GE GLobal Research
- GT
- Isomics
- Kitware
- Massachusetts General Hospital
- Moka Creative LLC, Washington University in St. Louis
- NIRAL, UNC
- Noware
- Orobix
- Perk Lab at Queen's University
- Perk Lab, Queen's
- Perk Lab, Queen's University
- PMH
- Queen's University
- Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto
- SBU
- SCI Institute
- Shiga University of Medical Science, Japan
- Shiga University of Medical Science, Japan, SPL
- SPL
- SPL and BWH
- SPL B&W Harvard
- SRI
- Stony Brook University
- Surgical Planning Lab
- UAB
- UIowa
- UNC
- Univ of Michigan
- University College Cork
- University of Bern
- University of Heidelberg
- University of Iowa
- University of Utah
- Utah
- UWA
- Washington University in St. Louis
- yogesh@bwh.harvard.edu
Asclepios INRIA) and Nikos Chrisochoides (CRTC
Boston Childrens Hospital
Brigham and Women's Hospital
BWH
- Change Tracker
- Curve Maker
- Dice Computation
- Fast Grow Cut Effect
- Open CAD
- Pk Modeling
- Segmentation Aided Registration
- Tracker Stabilizer
BWH & MGH
BWH, SPL
BWH/UAB
CARMA
College of Information Engineering, Zhejiang University of Technology, Hangzhou, China
Crisalix
CRTC
Department of Neurosurgery, PLA General Hospital, Beijing, China
Department of Orthodontics, UNC
GE
GE GLobal Research
GT
Isomics
Kitware
Massachusetts General Hospital
Moka Creative LLC, Washington University in St. Louis
NIRAL, UNC
Noware
Orobix
PerkLab at Queen's University
PerkLab, Queen's
PerkLab, Queen's University
PMH
Queen's University
Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto
SBU
SCI Institute
Shiga University of Medical Science, Japan
Shiga University of Medical Science, Japan, SPL
SPL
SPL and BWH
SPL B&W Harvard
SRI
Stony Brook University
Surgical Planning Lab
UAB
- Carrera Slice
- Fast Grow Cut Effect
- LAScar Segmenter
- Segmentation Aided Registration
- Sobolev Segmenter
UIowa
UNC
Univ of Michigan
University College Cork
University of Bern
University of Heidelberg
University of Iowa
University of Utah
Utah
UWA
Washington University in St. Louis
yogesh@bwh.harvard.edu
Extensions by contributing individual
125 contributing individuals:
- Akila Viswanathan
- Alan Morris (Utah)
- Alex Yarmarkovich (Kitware))
- Alireza Mehrtash (SPL and BWH)
- Allen Tannenbaum (Stony Brook University)
- Andinet Enquobahrie (Kitware)
- Andras Lasso (PerkLab, Queen's University)
- Andre Mastmeyer
- Andrey Fedorov (SPL B&W Harvard)
- Andriy Fedorov (BWH)
- Andriy Kot (CRTC)
- Antonio Damato
- Antonio Tristan-Vega (Isomics)
- Arie Nakhmani (UAB)
- Arnaud Gelas (Crisalix)
- Atsushi Yamada (SNR)
- Beatriz Paniagua (UNC)
- Bill Lorensen (Noware)
- Bradley Lowekamp (MSC/NLM)
- Brig Bagley (SCI Institute)
- Carl-Fredrik Westin
- Christian Baumgartner
- Csaba Pinter (PerkLab, Queen's University)
- Dan Marcus (Washington University in St. Louis)
- Daniel Haehn (UPenn)
- Danny Perry (Utah)
- Demian Wasssermann
- Dinggang Shen (UNC)
- Ethan Ulrich (Univ. of Iowa)
- Eugene Kholmovski (CARMA)
- Fotis Drakopoulos (CRTC)
- Francois Budin (NIRAL, UNC)
- Franklin King (PerkLab, Queen's University)
- Greg Gardner (Utah)
- Greg Sharp (MGH, Boston)
- Guillaume Pernelle
- Hans Johnson (SINAPSE)
- Ipek Oguz
- Ivan Kolesov (Stony Brook University)
- Jan Egger
- Jayender Jagadeesan (BWH)
- Jean-Christophe Fillion-Robin (Kitware)
- Jennifer Andrea (PerkLab, Queen's University)
- Jessica Forbes (SINAPSE)
- Jiashu Zhang (Department of Neurosurgery, PLA General Hospital, Beijing, China)
- Jim Miller (GE)
- Jonathan Bronson (SCI Institute)
- Josh Cates (Utah)
- Julien Finet (Kitware)
- Junichi Tokuda (BWH)
- Karl Fritscher (BWH & MGH)
- Kent Williams (UIowa)
- Kevin Wang (Princess Margaret Cancer Centre)
- Kilian Pohl (UPenn)
- Koichiro Murakami (SUMS)
- Lauren Barber
- Laurent Chauvin (BWH)
- Liang-Jia Zhu (UAB)
- Liangjia Zhu (Stony Brook University)
- Luca Antiga (Orobix)
- Luis G. Torres (UNC)
- Luping Fang (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
- Mahnaz Maddah (SRI)
- Manson Winsauer (UNC)
- Marcel Prastawa (University of Utah)
- Martin Styner (UNC)
- Matt Lougheed (PerkLab, Queen's University)
- Mattea Welch (PerkLab, Queen's University)
- Matthew Holden (Queen's University)
- Matthew S. Holden (Queen's University)
- Mauricio Reyes (University of Bern)
- Ming-ching Chang (GE)
- Minjeong Kim (UNC)
- Nabgha Fahrat
- Nicole Aucoin (BWH)
- Nigel Goh (UWA)
- Nikos Chrisochoides (CRTC)
- Olivier Clatz (Asclepios INRIA) and Nikos Chrisochoides (CRTC)
- Pat Marion (Kitware)
- Patricio Vela (GT)
- Paul Mercea (University of Heidelberg)
- Pengdong Xiao (Department of Orthodontics, UNC)
- Peter Black (BWH)
- Peter Karasev (Georgia Tech)
- Peter Savadjiev (Kitware))
- Pietro Nardelli (University College Cork)
- Qing Pan (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
- Rick Herrick (Washington University in St. Louis)
- Rob Mac Leod (Utah)
- Ron Kikinis (BWH)
- Ruifeng Chen (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
- Ryan Eckbo
- S
- Salma Bengali (CARMA)
- Sam Song
- Stefan Bauer (University of Bern)
- Stefan Lienhard
- Steve Pieper (SPL)
- Sunil Kumar (Moka Creative, LLC, kumar.sunil.p@gmail.com)
- Sylvain Bouix (BWH)
- Tamas Ungi (PerkLab, Queen's University)
- Thomas Fejes (University of Bern)
- Tina Kapur
- Tobias Penzkofer
- Vinicius Boen (Univ of Michigan)
- Vivek Narayan (BWH)
- Xiaofeng Liu (GE GLobal Research)
- Xiaojun Chen
- Xiaolei Chen (Department of Neurosurgery, PLA General Hospital, Beijing, China)
- y Wells
- Yi Gao (BWH/UAB)
- Yingxuan Zhu (GE)
- Yinpeng Li
- Yixun Liu (CRTC)
- Yogesh Rathi (yogesh@bwh.harvard.edu)
- Yundi Shi
Akila Viswanathan
Alan Morris
Alex Yarmarkovich
Alireza Mehrtash
Allen Tannenbaum
- Carrera Slice
- Fast Grow Cut Effect
- LAScar Segmenter
- Segmentation Aided Registration
- Sobolev Segmenter
Andinet Enquobahrie
Andras Lasso
Andre Mastmeyer
Andrey Fedorov
- CBC 3D I2MConversion
- Change Tracker
- Longitudinal PETCT
- PBNRR
- PETDICOMExtension
- Reporting
- TCIABrowser
- Window Level Effect
Andriy Fedorov
Andriy Kot
Antonio Damato
Antonio Tristan-Vega
Arie Nakhmani
Arnaud Gelas
Atsushi Yamada
Beatriz Paniagua
Bill Lorensen
Bradley Lowekamp
Brig Bagley
Carl-Fredrik Westin
Christian Baumgartner
Csaba Pinter
Dan Marcus
Daniel Haehn
Danny Perry
Demian Wasssermann
Dinggang Shen
Ethan Ulrich
Eugene Kholmovski
Fotis Drakopoulos
Francois Budin
Franklin King
Greg Gardner
Greg Sharp
Guillaume Pernelle
Hans Johnson
Ipek Oguz
Ivan Kolesov
Jan Egger
Jayender Jagadeesan
Jean-Christophe Fillion-Robin
Jennifer Andrea
Jessica Forbes
Jiashu Zhang
Jim Miller
Jonathan Bronson
Josh Cates
Julien Finet
Junichi Tokuda
Karl Fritscher
Kent Williams
Kevin Wang
Kilian Pohl
Koichiro Murakami
Lauren Barber
Laurent Chauvin
Liang-Jia Zhu
Liangjia Zhu
Luca Antiga
Luis G. Torres
Luping Fang
Mahnaz Maddah
Manson Winsauer
Marcel Prastawa
Martin Styner
Matt Lougheed
Mattea Welch
Matthew Holden
Matthew S. Holden
Mauricio Reyes
Ming-ching Chang
Minjeong Kim
Nabgha Fahrat
Nicole Aucoin
Nigel Goh
Nikos Chrisochoides
Olivier Clatz
Pat Marion
Patricio Vela
Paul Mercea
Pengdong Xiao
Peter Black
Peter Karasev
Peter Savadjiev
Pietro Nardelli
Qing Pan
Rick Herrick
Rob MacLeod
Ron Kikinis
Ruifeng Chen
Ryan Eckbo
S
Salma Bengali
Sam Song
Stefan Bauer
Stefan Lienhard
Steve Pieper
Sunil Kumar
Sylvain Bouix
Tamas Ungi
Thomas Fejes
Tina Kapur
Tobias Penzkofer
Vinicius Boen
Vivek Narayan
Xiaofeng Liu
Xiaojun Chen
Xiaolei Chen
y Wells
Yi Gao
- Carrera Slice
- Fast Grow Cut Effect
- i Gyne
- LAScar Segmenter
- Needle Finder
- Segmentation Aided Registration
