User:UpdateBot/Issue-2843-Consolidated-Extension-List

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Revision as of 11:05, 5 December 2014 by UpdateBot (talk | contribs) (This page has been updated based on the list of extension description files available on the ExtensionsIndex)
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Modules by name

156 modules:

Modules by name

156 modules:

Modules by category

30 categories:

BRAINS

LabelStatistics

  • BRAINSLabel Stats

CMF Registration

Voxelbase Registration

Converters

Developer Tools

DICOM Plugins

  • DICOMRWVMPlugin
  • DICOMLongitudinal PETCTPlugin
  • Multi Volume Importer Plugin
  • DICOMPETSUVPlugin
  • DICOMDiffusion Volume Plugin
  • DICOMSegmentation Plugin
  • DICOMScalar Volume Plugin
  • DICOMSlicer Data Bundle Plugin

Editor Extensions

Matlab

Diffusion

Diffusion Data Conversion

  • DWIConvert

Diffusion Tensor Images

Diffusion Weighted Images

Tractography

Editor Effects

Endoscopy

Examples

Exporter

Filtering

Arithmetic

Denoising

Morphology

IGT

Informatics

Legacy

Converters

Diffusion

Denoising

Diffusion Data Conversion

  • DTIimport
  • DTIexport

Filtering

Registration

Work in Progress

Diffusion Tensor

Test
  • Diffusion Tensor Test

Mesh Generation

MeshGeneration

Microscopy

Multidimensional data

MultiVolume Support

Perk Tutor

Quantification

ChangeQuantification

Registration

Specialized

Segmentation

Specialized

Slicelets

Surface Models

Testing

  • Self Tests
  • CLIROITest
  • CLI4Test
  • Threshold Threading Test
  • Scoliosis Monitoring
  • Performance Tests
  • Slicer MRBTest

TestCases

  • Slice Link Logic
  • Atlas Tests
  • RSNAQuant Tutorial
  • Volume Rendering Scene Close
  • test tractography display
  • Subject Hierarchy Core Plugins Self Test
  • slicer Close Crash Bug2590
  • Subject Hierarchy Generic Self Test
  • Charting
  • Scene Performance
  • Markups In Compare Viewers Self Test
  • fiber visibility crash2438
  • scene Import2428
  • RSNAVis Tutorial
  • JRC2013Vis
  • RSNA2012Prostate Demo
  • Add Many Markups Fiducial Test
  • Neurosurgical Planning Tutorial Markups Self Test
  • Colors Scalar Bar Self Test
  • Markups In Views Self Test
  • Change Tracker Self Test
  • Fiducial Layout Switch Bug1914
  • View Controllers Slice Interpolation Bug1926
  • Slicer4Minute
  • label Toggle Bug2049

Unspecified

  • BRAINSDWICleanup

Utilities

BRAINS

  • BRAINSTransform Convert

Wizards

Work in Progress

Converters

Informatics

TestCases

  • Reporting Self Test
  • Label To DICOMSEGConverter Self Test

XNATSlicer

Modules by contributing organization

62 contributing organizations:

Asclepios INRIA

AZE R&D

  • JRC2013Vis

Brigham and Women's Hospital

BWH

BWH, SPL

BWH, SUMS

BWH/UAB

College of Information Engineering, Zhejiang University of Technology, Hangzhou, China); Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China

CRTC

gatech

GE

Georgia Institute of Technology

Georgia Tech

IBM

Isomics

Isomics Inc.

  • DICOMDiffusion Volume Plugin
  • DICOMLongitudinal PETCTPlugin
  • DICOMScalar Volume Plugin
  • DICOMSlicer Data Bundle Plugin
  • Slicer MRBTest
  • Threshold Threading Test

Isomics, Inc.

Isomics, pieper@isomics.com

Kitware

Kitware)

MGH

Moka Creative, LLC, kumar.sunil.p@gmail.com

MSC/NLM

Noware

Orobix

PerkLab at Queen's University

PerkLab, Queen's

PerkLab, Queen's University

PMH

Queen's

Queen's University

Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto

SAIC-Frederick, NCI-Frederick

SBU

SCI Institute

Shiga University of Medical Science, Japan, SPL

SNR

SPL

SPL B&W Harvard

SPL, BWH

SPL, BWH, UPenn

Stony Brook University

SUMS

Surgical Planning Lab

UAB

Uiowa

  • DWIConvert (cli, built-in)

UIowa

  • DWIConvert (cli, built-in)

UNC

Univ of Michigan

Univ. of Iowa

University College Cork

University of Alabama Birmingham

University of Heidelberg

University of Iowa

University of Iowa) and Andrey Fedorov (SPL

UPenn

Utah

UVa

UWA

WashU-St. Louis, dmarcus@wustl.edu

while at GE

Modules by contributing organization

62 contributing organizations:

Modules by contributing individual

148 contributing individuals:

Akila Viswanathan

Alan Morris

Alex Yarmakovich

  • Models (loadable, built-in)
  • Tractography Interactive Seeding (loadable, built-in)

Alex Yarmarkovich

Ali Ghayoor

  • BRAINSTransform Convert (cli, built-in)
  • Perform Metric Test (cli, built-in)

Alireza Mehrtash

Allen Tannenbaum

Analysis Laboratory

Andinet Enquobahrie

Andras Lasso

Andreas Freudling

Andrey Fedorov

Andriy Kot

Anonymous

  • CLIROITest (cli, built-in)
  • EMSegment Transform To New Format (cli, built-in)

Antonio Damato

Antonio Tristan Vega

Arie Nakhmani

Atsushi Yamada

Beatriz Paniagua from Department of Orthodontics

Benjamin Long

Bill Lorensen

Brad Davis

  • EMSegment Command Line (cli, built-in)

Bradley Lowekamp

BWH

  • DICOMSegmentation Plugin
  • Multi Volume Importer Plugin

Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez

Casey B Goodlett

Charles Marion

Csaba Pinter

Dan Marcus

Daniel Blezek

Daniel Haehn

Danny Perry

Demian Wassermann

Dinggang Shen

Dirk Padfield

Dominik Meier

Ethan Ulrich

ez

Fotis Drakopoulos

Francois Budin

Franklin King

Greg Gardner

Greg Harris

Guido Gerig

Guillaume Pernelle

Hans J. Johnson

  • BRAINSDemon Warp (cli, built-in)
  • BRAINSFit (cli, built-in)
  • BRAINSROIAuto (cli, built-in)
  • BRAINSTransform Convert (cli, built-in)
  • VBRAINSDemon Warp (cli, built-in)

Hans Johnson

hans-johnson -at- uiowa.edu

  • BRAINSFit (cli, built-in)
  • BRAINSROIAuto (cli, built-in)

http://www.psychiatry.uiowa.edu

  • BRAINSFit (cli, built-in)
  • BRAINSROIAuto (cli, built-in)

Ivan Kolesov

Jan Egger

Jayender Jagadeesan

Jean-Baptiste Berger

Jean-Christophe Fillion-Robin

Jim Miller

Johan Andruejol

  • Units (loadable, built-in)

John Evans

Jonathan Bronson

Josh Cates

Joy Matsui

  • DWIConvert (cli, built-in)

Julien Finet

Julien Jomier

Junichi Tokuda

Kent Williams

  • BRAINSDWICleanup (cli, built-in)
  • BRAINSTransform Convert (cli, built-in)
  • DWIConvert (cli, built-in)

Kevin Wang

Kilian Pohl

Koichiro Murakami

Lauren Barber

Lauren O'Donnell

Laurent Chauvin

Liang-Jia Zhu

Liangjia Zhu

Luca Antiga

Luis G. Torres

Luping Fang

Marc Niethammer

Marcel Prastawa prastawa@sci.utah.edu

  • ABC (cli, bundled in ABC extension)

Mark Scully

  • DWIConvert (cli, built-in)

Markus Van Tol

Martin Styner

Mason Winsauer

Matt Lougheed

Matthew Holden

Matthew S. Holden

Matthew Woehlke

Michael Jeulin-Lagarrigue

Minjeong Kim

Nabgha Fahrat

Neuro Image Resarch

Nicholas Herlambang

  • JRC2013Vis

Nick Tustison

Nicole Aucoin

Nigel Goh

Nikos Chrisochoides

Olivier Clatz

Pat Marion

Patricio Vela

Paul Mercea

Pengdong Xiao

Peter Black

Peter Karasev

Peter Savadjiev

Pierre Seroul

Pietro Nardelli

Polina Goll

  • EMSegment Command Line (cli, built-in)

Qing Pan

Raul San Jose

Rob MacLeod

Ron Kikinis

Ross Whitaker

Ruifeng Chen

S

Sam Song

Santiago Aja Fern

Sebastien Barré

Sebastien Barre

  • EMSegment Command Line (cli, built-in)

Shigeyuki Naka

Soichiro Tani

Sonia Pujol

Stephen Aylward

Stephen R Aylward

Steve Pieper

Sunil Kumar

Sylvain Bouix

Tamas Ungi

the University of North Carolina at Chapel Hill

Tina Kapur

Tobias Penzkofer

Tohru Tani

UNC Medical School

UofM School Of Dentistry

UofM School of Dentistry

Vince Magnotta

  • DWIConvert (cli, built-in)

Vincent A. Magnotta

  • BRAINSLabel Stats (cli, built-in)

Vincent Magnotta

Vinicius Boen

Wendy Plesniak

Xiaodong Tao

Xiaofeng Liu

Xiaojun Chen

y Wells

Yanling Liu

Yi Gao

Yinglin Lee

  • Test Grid Transform Registration (cli, built-in)

Yingxuan Zhu

Yixun Liu

Yong Zhang

Yumin Yuan

  • EMSegment Command Line (cli, built-in)

Modules by contributing individual

148 contributing individuals:

Modules by type

3 types:

cli

loadable

scripted

Modules by type

3 types:

Modules by extension

46 extensions:

ABC

  • ABC (cli, bundled in ABC extension)

AirwaySegmentation

builtin

CarreraSlice

CBC_3D_I2MConversion

ChangeTracker

CleaverExtension

CMFreg

CornerAnnotation

CurveMaker

DiceComputation

ErodeDilateLabel

FastGrowCutEffect

FinslerTractography

GelDosimetryAnalysis

GyroGuide

IASEM

iGyne

ImageMaker

IntensitySegmenter

LAScarSegmenter

LongitudinalPETCT

MABMIS

MatlabBridge

MultidimData

NeedleFinder

PBNRR

PercutaneousApproachAnalysis

PerkTutor

PETDICOMExtension

PkModeling

PortPlacement

PyDevRemoteDebug

Reporting

Scoliosis

SegmentationAidedRegistration

SlicerToKiwiExporter

SobolevSegmenter

SwissSkullStripper

TCIABrowser

ThingiverseBrowser

TrackerStabilizer

VolumeClip

WindowLevelEffect

XNATSlicer

Modules by extension

46 extensions:

Available extensions by name

45 available extensions:

Available extensions by category

26 categories:

Cardiac

Cardiac MRI toolkit

Converters

Developer Tools

Diffusion

Editor Effects

Exporter

Filtering

Morphology

IGT

Informatics

Mesh Generation

Microscopy

Multidimensional data

Quantification

Radiotherapy

Registration

Remote

Scoliosis

Segmentation

Shape Analysis

Surface Models

Tractography

Training

Utilities

Vascular Modeling Toolkit

Wizards

Available extensions by contributing organization

54 contributing organizations:

Asclepios INRIA) and Nikos Chrisochoides (CRTC

Brigham and Women's Hospital

BWH

BWH & MGH

BWH, SPL

BWH/UAB

College of Information Engineering, Zhejiang University of Technology, Hangzhou, China

Crisalix

CRTC

Department of Neurosurgery, PLA General Hospital, Beijing, China

Department of Orthodontics, UNC

GE

GE GLobal Research

GT

Isomics

Kitware

Moka Creative LLC, Washington University in St. Louis

NIRAL, UNC

Noware

PerkLab at Queen's University

PerkLab, Queen's

PerkLab, Queen's University

PMH

Queen's University

Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto

SBU

SCI Institute

Shiga University of Medical Science, Japan

Shiga University of Medical Science, Japan, SPL

SPL

SPL and BWH

SPL B&W Harvard

SRI

Stony Brook University

Surgical Planning Lab

UAB

UNC

Univ of Michigan

University College Cork

University of Bern

University of Heidelberg

University of Iowa

University of Utah

Utah

UWA

Washington University in St. Louis

Available extensions by contributing individual

125 contributing individuals:

Akila Viswanathan

Alan Morris

Alex Yarmarkovich

Alireza Mehrtash

Allen Tannenbaum

Andinet Enquobahrie

Andras Lasso

Andre Mastmeyer

Andrey Fedorov

Andriy Fedorov

Andriy Kot

Antonio Damato

Antonio Tristan-Vega

Arie Nakhmani

Arnaud Gelas

Atsushi Yamada

Beatriz Paniagua

Bill Lorensen

Bradley Lowekamp

Brig Bagley

Carl-Fredrik Westin

Csaba Pinter

Dan Marcus

Danny Perry

Demian Wasssermann

Dinggang Shen

Ethan Ulrich

Fotis Drakopoulos

Francois Budin

Franklin King

Greg Gardner

Guillaume Pernelle

Ivan Kolesov

Jan Egger

Jayender Jagadeesan

Jean-Christophe Fillion-Robin

Jennifer Andrea

Jiashu Zhang

Jim Miller

Jonathan Bronson

Josh Cates

Julien Finet

Junichi Tokuda

Karl Fritscher

Kevin Wang

Kilian Pohl

Koichiro Murakami

Lauren Barber

Laurent Chauvin

Liang-Jia Zhu

Liangjia Zhu

Luis G. Torres

Luping Fang

Mahnaz Maddah

Manson Winsauer

Marcel Prastawa

Matt Lougheed

Mattea Welch

Matthew Holden

Matthew S. Holden

Mauricio Reyes

Ming-ching Chang

Minjeong Kim

Nabgha Fahrat

Nicole Aucoin

Nigel Goh

Nikos Chrisochoides

Olivier Clatz

Pat Marion

Patricio Vela

Paul Mercea

Pengdong Xiao

Peter Black

Peter Karasev

Peter Savadjiev

Pietro Nardelli

Qing Pan

Rick Herrick

Rob MacLeod

Ron Kikinis

Ruifeng Chen

S

Sam Song

Stefan Bauer

Steve Pieper

Sunil Kumar

Sylvain Bouix

Tamas Ungi

Thomas Fejes

Tina Kapur

Tobias Penzkofer

Vinicius Boen

Xiaofeng Liu

Xiaojun Chen

Xiaolei Chen

y Wells

Yi Gao

Yingxuan Zhu

Yixun Liu

Broken extensions by name

22 broken extensions:

Broken extensions by category

26 categories:

Cardiac

Cardiac MRI toolkit

Converters

Developer Tools

Diffusion

Editor Effects

Exporter

Filtering

Morphology

IGT

Informatics

Mesh Generation

Microscopy

Multidimensional data

Quantification

Radiotherapy

Registration

Remote

Scoliosis

Segmentation

Shape Analysis

Surface Models

Tractography

Training

Utilities

Vascular Modeling Toolkit

Wizards

Broken extensions by contributing organization

54 contributing organizations:

Boston Childrens Hospital

Brigham and Women's Hospital

BWH

CARMA

GE

Isomics

Kitware

LUH

Massachusetts General Hospital

NIRAL, UNC

Orobix

PerkLab, Queen's University

Queen's University

Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto

SBU

UAB

UIowa

UNC

Utah

yogesh@bwh.harvard.edu

Broken extensions by contributing individual

125 contributing individuals:

Adrien Kaiser

Alan Morris

Alexis Girault

Allen Tannenbaum

Andras Lasso

Beatriz Paniagua

Carl-Fredrik Westin

Christian Baumgartner

Csaba Pinter

Daniel Haehn

Danny Perry

Eugene Kholmovski

Francois Budin

Greg Gardner

Greg Sharp

Guillaume Pernelle

Hans Johnson

Harini Veeraraghavan

Ipek Oguz

Jayender Jagadeesan

Jean-Christophe Fillion-Robin

Jessica Forbes

Josh Cates

Juliette Pera

Jun LIN

Junichi Tokuda

Kent Williams

Kevin Wang

Liangjia Zhu

Luca Antiga

Martha Shenton

Martin Styner

Peter Savadjiev

Rob MacLeod

Ron Kikinis

Ryan Eckbo

Salma Bengali

Sebastian Tauscher

Stefan Lienhard

Steve Pieper

Sylvain Bouix

Tamas Ungi

Vivek Narayan

Xiaodong Tao

Xiaojun CHEN

Yi Gao

Yinpeng Li

Yogesh Rathi

Yundi Shi