Difference between revisions of "User:UpdateBot/Issue-2843-Consolidated-Extension-List"
From Slicer Wiki
(This page has been updated based on the list of extension description files available on the ExtensionsIndex) |
(This page has been updated based on the list of extension description files available on the ExtensionsIndex) |
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{{:User:UpdateBot/Issue-2843-Consolidated-Extension-List/TOC}} | {{:User:UpdateBot/Issue-2843-Consolidated-Extension-List/TOC}} | ||
= Modules by name = | = Modules by name = | ||
| − | + | 150 modules: | |
* [http://www.nitrc.org/projects/abc ABC] <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small> | * [http://www.nitrc.org/projects/abc ABC] <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small> | ||
| − | * | + | * ACPCTransform <small>(cli, built-in)</small> |
| − | * | + | * Add Scalar Volumes <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation CLI] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation] extension)</small> |
| − | * | + | * Annotations <small>(loadable, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Apply Matrix] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM Bin Shrink] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEM] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion Body Centric Cubic Mesh] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion CBC 3D I2MConversion] extension)</small> |
| − | * | + | * BRAINSDemon Warp <small>(cli, built-in)</small> |
* BRAINSDWICleanup <small>(cli, built-in)</small> | * BRAINSDWICleanup <small>(cli, built-in)</small> | ||
| − | * | + | * BRAINSFit <small>(cli, built-in)</small> |
* BRAINSLabel Stats <small>(cli, built-in)</small> | * BRAINSLabel Stats <small>(cli, built-in)</small> | ||
| − | * | + | * BRAINSResample <small>(cli, built-in)</small> |
* BRAINSResize <small>(cli, built-in)</small> | * BRAINSResize <small>(cli, built-in)</small> | ||
* BRAINSROIAuto <small>(cli, built-in)</small> | * BRAINSROIAuto <small>(cli, built-in)</small> | ||
* BRAINSTransform Convert <small>(cli, built-in)</small> | * BRAINSTransform Convert <small>(cli, built-in)</small> | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
| − | * | + | * Cast Scalar Volume <small>(cli, built-in)</small> |
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ChangeTracker Change Tracker] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ChangeTracker Change Tracker] extension)</small> |
| − | * | + | * Checker Board Filter <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CleaverExtension Cleaver CLI] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CleaverExtension Cleaver Extension] extension)</small> |
| − | * | + | * Colors <small>(loadable, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Compare Volumes] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CornerAnnotation Corner Annotation] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CornerAnnotation Corner Annotation] extension)</small> |
| − | * | + | * Create DICOMSeries <small>(cli, built-in)</small> |
| − | * | + | * Crop Volume <small>(loadable, built-in)</small> |
| − | * | + | * Curvature Anisotropic Diffusion <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CurveMaker Curve Maker] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CurveMaker Curve Maker] extension)</small> |
| − | * | + | * Data <small>(loadable, built-in)</small> |
| − | * | + | * Data Probe <small>(scripted, built-in)</small> |
| − | * | + | * Data Store <small>(loadable, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DiceComputation Dice Computation] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DiceComputation Dice Computation] extension)</small> |
| − | |||
* DICOM2Full Brain Tractography <small>(scripted, built-in)</small> | * DICOM2Full Brain Tractography <small>(scripted, built-in)</small> | ||
| − | * | + | * Diffusion Tensor Scalar Measurements <small>(cli, built-in)</small> |
| − | * | + | * Diffusion Weighted Volume Masking <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ErodeDilateLabel Dilate Label] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ErodeDilateLabel Erode Dilate Label] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Downsize] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
* DWIConvert <small>(cli, built-in)</small> | * DWIConvert <small>(cli, built-in)</small> | ||
| − | * | + | * DWIJoint Rician LMMSEFilter <small>(cli, built-in)</small> |
| − | * | + | * DWIRician LMMSEFilter <small>(cli, built-in)</small> |
| − | * | + | * DWITo DTIEstimation <small>(cli, built-in)</small> |
| − | * | + | * Editor <small>(scripted, built-in)</small> |
* EMSegment <small>(loadable, built-in)</small> | * EMSegment <small>(loadable, built-in)</small> | ||
* EMSegment Command Line <small>(cli, built-in)</small> | * EMSegment Command Line <small>(cli, built-in)</small> | ||
* EMSegment Quick <small>(loadable, built-in)</small> | * EMSegment Quick <small>(loadable, built-in)</small> | ||
* EMSegment Transform To New Format <small>(cli, built-in)</small> | * EMSegment Transform To New Format <small>(cli, built-in)</small> | ||
| − | * | + | * Endoscopy <small>(scripted, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ErodeDilateLabel Erode Label] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ErodeDilateLabel Erode Dilate Label] extension)</small> |
| − | * | + | * Extract Skeleton <small>(cli, built-in)</small> |
| − | * [ | + | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut] <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> |
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
* Fiber Bundle Label Select <small>(cli, built-in)</small> | * Fiber Bundle Label Select <small>(cli, built-in)</small> | ||
| − | * | + | * Fiber Bundle To Label Map <small>(scripted, built-in)</small> |
| − | * | + | * Fiber Tract Measurements <small>(cli, built-in)</small> |
| − | * [ | + | * Fiducial Registration <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.nitrc.org/projects/finslertract/ Finsler Backtracing] <small>(cli, bundled in [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] extension)</small> |
| − | * | + | * [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] <small>(cli, bundled in [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] extension)</small> |
| + | * Gaussian Blur Image Filter <small>(cli, built-in)</small> | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | ||
| − | * | + | * Gradient Anisotropic Diffusion <small>(cli, built-in)</small> |
| − | * | + | * Grayscale Fill Hole Image Filter <small>(cli, built-in)</small> |
| − | * | + | * Grayscale Grind Peak Image Filter <small>(cli, built-in)</small> |
| − | * | + | * Grayscale Model Maker <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Growing] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/GyroGuide Gyro Guide] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/GyroGuide Gyro Guide] extension)</small> |
| − | * | + | * Histogram Matching <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEMImport] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEM] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEMImport Series] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEM] extension)</small> |
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MABMIS IGR3D MABMIS Testing] <small>(cli, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MABMIS MABMIS] extension)</small> |
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MABMIS IGR3D MABMIS Training] <small>(cli, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MABMIS MABMIS] extension)</small> |
| − | * [ | + | * [https://github.com/gpernelle/iGyne i Gyne] <small>(scripted, bundled in [https://github.com/gpernelle/iGyne i Gyne] extension)</small> |
| − | * | + | * Image Label Combine <small>(cli, built-in)</small> |
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ChangeTracker Intensity Difference Metric] <small>(cli, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ChangeTracker Change Tracker] extension)</small> |
| − | * [ | + | * [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] <small>(cli, bundled in [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] extension)</small> |
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter KUtil] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter KUtil] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Label Addition] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Label Extraction] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * | + | * Label Map Smoothing <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM Label Object Statistics] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEM] extension)</small> |
| − | * | + | * Label Statistics <small>(scripted, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Landmark Registration] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] extension)</small> | |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT Longitudinal PETCT] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT Longitudinal PETCT] extension)</small> |
| − | * [ | + | * Markups <small>(loadable, built-in)</small> |
| − | * | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Mask Creation] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * Mask Scalar Volume <small>(cli, built-in)</small> |
| − | * | + | * Median Image Filter <small>(cli, built-in)</small> |
| − | * | + | * Merge Models <small>(cli, built-in)</small> |
| − | * | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion Mesh Compression] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion CBC 3D I2MConversion] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Metafile Importer] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Multidim Data] extension)</small> |
| − | * [ | + | * Model Maker <small>(cli, built-in)</small> |
| − | * | + | * Models <small>(loadable, built-in)</small> |
| − | * | + | * Model To Label Map <small>(cli, built-in)</small> |
| − | * | + | * Multiply Scalar Volumes <small>(cli, built-in)</small> |
| − | * | + | * Multi Volume Explorer <small>(loadable, built-in)</small> |
| − | * | + | * Multi Volume Importer <small>(scripted, built-in)</small> |
| − | * | + | * N4ITKBias Field Correction <small>(cli, built-in)</small> |
| − | * | + | * [https://github.com/gpernelle/NeedleFinder Needle Finder] <small>(scripted, bundled in [https://github.com/gpernelle/NeedleFinder Needle Finder] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Non Growing] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * Open IGTLink IF <small>(loadable, built-in)</small> |
| − | * | + | * Orient Scalar Volume <small>(cli, built-in)</small> |
| − | * | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PBNRR PBNRR] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PBNRR PBNRR] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/PercutaneousApproachAnalysis Percutaneous Approach Analysis] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/PercutaneousApproachAnalysis Percutaneous Approach Analysis] extension)</small> |
| − | * [ | ||
* Perform Metric Test <small>(cli, built-in)</small> | * Perform Metric Test <small>(cli, built-in)</small> | ||
| − | * [ | + | * [http://www.perktutor.org/ Perk Evaluator] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> |
| − | * | + | * PETStandard Uptake Value Computation <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT PETSUVImage Maker] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT Longitudinal PETCT] extension)</small> |
| − | * [ | + | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] <small>(cli, bundled in [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PortPlacement Port Placement] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PortPlacement Port Placement] extension)</small> |
| − | * | + | * Probe Volume With Model <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.perktutor.org/ Python Metrics Calculator] <small>(scripted, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> |
| − | * | + | * Reformat <small>(loadable, built-in)</small> |
| − | * | + | * Resample DTIVolume <small>(cli, built-in)</small> |
| − | + | * Resample Scalar Vector DWIVolume <small>(cli, built-in)</small> | |
| − | * | + | * Robust Statistics Segmenter <small>(cli, built-in)</small> |
| − | * | + | * Sample Data <small>(scripted, built-in)</small> |
| − | * | + | * Scene Views <small>(loadable, built-in)</small> |
| − | * | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Sequence Browser] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Multidim Data] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Sequences] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Multidim Data] extension)</small> |
| − | * [ | + | * Simple Filters <small>(scripted, built-in)</small> |
| − | * | + | * Simple Region Growing Segmentation <small>(cli, built-in)</small> |
| − | * | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SlicerToKiwiExporter Slicer To Kiwi Exporter] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SlicerToKiwiExporter Slicer To Kiwi Exporter] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SobolevSegmenter Sobolev Segmenter] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SobolevSegmenter Sobolev Segmenter] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM Spacing Aware Curvature Diffusion] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEM] extension)</small> |
| − | * [ | + | * [https://www.assembla.com/spaces/Scoliosis/wiki Spinal Curvature Measurement] <small>(scripted, bundled in [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis] extension)</small> |
| − | * [ | + | * Subject Hierarchy <small>(loadable, built-in)</small> |
| − | * | + | * Subtract Scalar Volumes <small>(cli, built-in)</small> |
| − | * | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Surface Registration] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM SUVFactor Calculator] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SwissSkullStripper Swiss Skull Stripper] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SwissSkullStripper Swiss Skull Stripper] extension)</small> |
| − | + | * [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] extension)</small> | |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ThingiverseBrowser Thingiverse Browser] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ThingiverseBrowser Thingiverse Browser] extension)</small> |
| − | * [ | + | * Threshold Scalar Volume <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/TrackerStabilizer Tracker Stabilizer] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/TrackerStabilizer Tracker Stabilizer] extension)</small> |
| − | * | + | * Tractography Display <small>(loadable, built-in)</small> |
| − | * [ | ||
| − | * | ||
* Tractography Interactive Seeding <small>(loadable, built-in)</small> | * Tractography Interactive Seeding <small>(loadable, built-in)</small> | ||
| − | * | + | * Tractography Label Map Seeding <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.perktutor.org/ Transform Recorder] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> |
| − | * | + | * Transforms <small>(loadable, built-in)</small> |
| − | * | + | * Units <small>(loadable, built-in)</small> |
* VBRAINSDemon Warp <small>(cli, built-in)</small> | * VBRAINSDemon Warp <small>(cli, built-in)</small> | ||
| − | * | + | * View Controllers <small>(loadable, built-in)</small> |
| − | + | * Volume Rendering <small>(loadable, built-in)</small> | |
| − | * | + | * Volumes <small>(loadable, built-in)</small> |
| − | + | * Voting Binary Hole Filling Image Filter <small>(cli, built-in)</small> | |
| − | + | * Welcome <small>(loadable, built-in)</small> | |
| − | * | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/WindowLevelEffect Window Level Effect] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/WindowLevelEffect Window Level Effect] extension)</small> |
| − | * | + | * [http://www.perktutor.org/ Workflow Segmentation] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> |
| − | * | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/XNATSlicer Xnat Slicer] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/XNATSlicer XNATSlicer] extension)</small> |
| − | * [ | ||
| − | * [ | ||
| − | * [ | ||
= Modules by category = | = Modules by category = | ||
30 categories: | 30 categories: | ||
| Line 216: | Line 210: | ||
* [[#Wizards|Wizards]] | * [[#Wizards|Wizards]] | ||
* [[#Work_in_Progress|Work in Progress]] | * [[#Work_in_Progress|Work in Progress]] | ||
| − | |||
** [[#Informatics|Informatics]] | ** [[#Informatics|Informatics]] | ||
*** [[#TestCases|Test Cases]] | *** [[#TestCases|Test Cases]] | ||
| Line 224: | Line 217: | ||
* BRAINSLabel Stats | * BRAINSLabel Stats | ||
== CMF Registration == | == CMF Registration == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Apply Matrix] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Landmark Registration] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Surface Registration] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Label Extraction] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Label Addition] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Downsize] |
=== Voxelbase Registration === | === Voxelbase Registration === | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Mask Creation] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Non Growing] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Growing] |
== Converters == | == Converters == | ||
| − | * | + | * Crop Volume |
| − | + | * Create DICOMSeries | |
| − | * | + | * Orient Scalar Volume |
| − | * | ||
== Developer Tools == | == Developer Tools == | ||
| − | * | + | * Event Broker |
* Double Arrays | * Double Arrays | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PyDevRemoteDebug Py Dev Remote Debug] |
| − | * | + | * Cameras |
| − | * | + | * Extension Wizard |
| − | * | + | * Execution Model Tour |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ImageMaker Image Maker] |
=== DICOM Plugins === | === DICOM Plugins === | ||
| − | * | + | * DICOMRWVMPlugin |
* DICOMLongitudinal PETCTPlugin | * DICOMLongitudinal PETCTPlugin | ||
* Multi Volume Importer Plugin | * Multi Volume Importer Plugin | ||
| − | * | + | * DICOMPETSUVPlugin |
* DICOMDiffusion Volume Plugin | * DICOMDiffusion Volume Plugin | ||
| − | |||
* DICOMScalar Volume Plugin | * DICOMScalar Volume Plugin | ||
* DICOMSlicer Data Bundle Plugin | * DICOMSlicer Data Bundle Plugin | ||
=== Editor Extensions === | === Editor Extensions === | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM Binary Watershed Effect] |
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice Effect] | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice Effect] | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM Double Threshold Effect] |
=== Matlab === | === Matlab === | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Module Generator] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Commander] |
== Diffusion == | == Diffusion == | ||
| − | * | + | * Tractography Display |
* DICOM2Full Brain Tractography | * DICOM2Full Brain Tractography | ||
=== Diffusion Data Conversion === | === Diffusion Data Conversion === | ||
* DWIConvert | * DWIConvert | ||
=== Diffusion Tensor Images === | === Diffusion Tensor Images === | ||
| − | * | + | * Resample DTIVolume |
| − | * | + | * Diffusion Tensor Scalar Measurements |
| − | * | + | * Tractography Label Map Seeding |
| + | * Fiber Tract Measurements | ||
* Tractography Interactive Seeding | * Tractography Interactive Seeding | ||
=== Diffusion Weighted Images === | === Diffusion Weighted Images === | ||
| − | * | + | * DWIRician LMMSEFilter |
| − | * | + | * DWIJoint Rician LMMSEFilter |
| − | * | + | * DWITo DTIEstimation |
| − | * [ | + | * [http://www.nitrc.org/projects/finslertract/ Finsler Backtracing] |
| − | * | + | * Resample Scalar Vector DWIVolume |
| − | * [ | + | * [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] |
| − | * | + | * Diffusion Weighted Volume Masking |
=== Tractography === | === Tractography === | ||
| − | * | + | * Fiber Bundle To Label Map |
* Fiber Bundle Label Select | * Fiber Bundle Label Select | ||
== Editor Effects == | == Editor Effects == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/WindowLevelEffect Window Level Effect] |
== Endoscopy == | == Endoscopy == | ||
| − | * | + | * Endoscopy |
== Examples == | == Examples == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | ||
| − | * [ | + | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut] |
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter] | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter] | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] |
== Exporter == | == Exporter == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SlicerToKiwiExporter Slicer To Kiwi Exporter] |
== Filtering == | == Filtering == | ||
| − | * | + | * Extract Skeleton |
| − | * | + | * Threshold Scalar Volume |
| − | * | + | * N4ITKBias Field Correction |
| − | * | + | * Simple Filters |
| − | * | + | * Image Label Combine |
| − | * | + | * Voting Binary Hole Filling Image Filter |
| − | * | + | * Histogram Matching |
| − | * | + | * Checker Board Filter |
=== Arithmetic === | === Arithmetic === | ||
| − | * | + | * Multiply Scalar Volumes |
| − | * | + | * Add Scalar Volumes |
| − | * | + | * Cast Scalar Volume |
| − | * | + | * Subtract Scalar Volumes |
| − | * | + | * Mask Scalar Volume |
=== Denoising === | === Denoising === | ||
| − | * | + | * Gradient Anisotropic Diffusion |
| − | * | + | * Median Image Filter |
| − | * | + | * Gaussian Blur Image Filter |
| − | * | + | * Curvature Anisotropic Diffusion |
=== Morphology === | === Morphology === | ||
| − | * | + | * Grayscale Fill Hole Image Filter |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ErodeDilateLabel Erode Label] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ErodeDilateLabel Dilate Label] |
| − | * | + | * Grayscale Grind Peak Image Filter |
== IGT == | == IGT == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/PercutaneousApproachAnalysis Percutaneous Approach Analysis] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PortPlacement Port Placement] |
| − | * | + | * Open IGTLink IF |
| − | * [ | + | * [https://github.com/gpernelle/NeedleFinder Needle Finder] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/TrackerStabilizer Tracker Stabilizer] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/GyroGuide Gyro Guide] |
| − | * [ | + | * [https://github.com/gpernelle/iGyne i Gyne] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CornerAnnotation Corner Annotation] |
== Informatics == | == Informatics == | ||
| − | * | + | * Annotations |
| − | * | + | * Markups |
| − | * | + | * Units |
| − | * | + | * Sample Data |
| − | + | * Subject Hierarchy | |
| − | * | + | * Data |
| − | * | + | * Colors |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CurveMaker Curve Maker] |
| − | + | * [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] | |
| − | * [ | ||
== Legacy == | == Legacy == | ||
=== Converters === | === Converters === | ||
| − | * | + | * BSpline To Deformation Field |
=== Diffusion === | === Diffusion === | ||
==== Denoising ==== | ==== Denoising ==== | ||
| − | * | + | * DWIUnbiased Non Local Means Filter |
==== Diffusion Data Conversion ==== | ==== Diffusion Data Conversion ==== | ||
* DTIimport | * DTIimport | ||
* DTIexport | * DTIexport | ||
=== Filtering === | === Filtering === | ||
| − | * | + | * Otsu Threshold Image Filter |
| − | * | + | * Resample Scalar Volume |
=== Registration === | === Registration === | ||
* Test Grid Transform Registration | * Test Grid Transform Registration | ||
| − | * | + | * Expert Automated Registration |
=== Work in Progress === | === Work in Progress === | ||
==== Diffusion Tensor ==== | ==== Diffusion Tensor ==== | ||
| Line 361: | Line 352: | ||
* Diffusion Tensor Test | * Diffusion Tensor Test | ||
== Mesh Generation == | == Mesh Generation == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CleaverExtension Cleaver CLI] |
== MeshGeneration == | == MeshGeneration == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion Body Centric Cubic Mesh] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion Mesh Compression] |
== Microscopy == | == Microscopy == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM Bin Shrink] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM Label Object Statistics] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM Spacing Aware Curvature Diffusion] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEMImport Series] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEMImport] |
== Multidimensional data == | == Multidimensional data == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Metafile Importer] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Sequence Browser] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Sequences] |
== MultiVolume Support == | == MultiVolume Support == | ||
| − | * | + | * Multi Volume Explorer |
| − | * | + | * Multi Volume Importer |
== Perk Tutor == | == Perk Tutor == | ||
| − | * [ | + | * [http://www.perktutor.org/ Python Metrics Calculator] |
| − | * [ | + | * [http://www.perktutor.org/ Workflow Segmentation] |
| − | * [ | + | * [http://www.perktutor.org/ Transform Recorder] |
| − | * [ | + | * [http://www.perktutor.org/ Perk Evaluator] |
== Quantification == | == Quantification == | ||
| − | * | + | * PETStandard Uptake Value Computation |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM SUVFactor Calculator] |
| − | * [ | + | * [https://www.assembla.com/spaces/Scoliosis/wiki Spinal Curvature Measurement] |
| − | * [ | + | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] |
| − | * | + | * Label Statistics |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT PETSUVImage Maker] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DiceComputation Dice Computation] |
| − | * | + | * Data Probe |
=== ChangeQuantification === | === ChangeQuantification === | ||
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ChangeTracker Intensity Difference Metric] |
== Registration == | == Registration == | ||
| − | * | + | * Transforms |
| − | |||
* BRAINSResize | * BRAINSResize | ||
* Perform Metric Test | * Perform Metric Test | ||
| − | * [ | + | * BRAINSFit |
| − | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PBNRR PBNRR] | |
| + | * BRAINSResample | ||
=== Specialized === | === Specialized === | ||
| − | * | + | * ACPCTransform |
| − | * | + | * Fiducial Registration |
* VBRAINSDemon Warp | * VBRAINSDemon Warp | ||
| − | * | + | * BRAINSDemon Warp |
| − | * | + | * Reformat |
== Segmentation == | == Segmentation == | ||
| − | * | + | * Editor |
* EMSegment Quick | * EMSegment Quick | ||
| − | * | + | * Simple Region Growing Segmentation |
* EMSegment | * EMSegment | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation CLI] |
| − | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] | |
| − | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SobolevSegmenter Sobolev Segmenter] | |
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MABMIS IGR3D MABMIS Testing] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SwissSkullStripper Swiss Skull Stripper] |
| − | * [ | ||
| − | * [ | ||
* [http://www.nitrc.org/projects/abc ABC] | * [http://www.nitrc.org/projects/abc ABC] | ||
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MABMIS IGR3D MABMIS Training] |
| − | * [ | + | * [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] |
=== Specialized === | === Specialized === | ||
* EMSegment Command Line | * EMSegment Command Line | ||
| − | * | + | * Robust Statistics Segmenter |
* BRAINSROIAuto | * BRAINSROIAuto | ||
== Slicelets == | == Slicelets == | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo] | ||
== Surface Models == | == Surface Models == | ||
| − | * | + | * Model To Label Map |
| − | * | + | * Merge Models |
| − | * | + | * Probe Volume With Model |
| − | + | * Grayscale Model Maker | |
| − | * | + | * Label Map Smoothing |
| − | * | + | * Model Maker |
| − | * | ||
== Testing == | == Testing == | ||
* Self Tests | * Self Tests | ||
| Line 441: | Line 429: | ||
* CLI4Test | * CLI4Test | ||
* Threshold Threading Test | * Threshold Threading Test | ||
| − | * [ | + | * [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis Monitoring] |
* Performance Tests | * Performance Tests | ||
* Slicer MRBTest | * Slicer MRBTest | ||
| Line 450: | Line 438: | ||
* Volume Rendering Scene Close | * Volume Rendering Scene Close | ||
* test tractography display | * test tractography display | ||
| − | |||
* slicer Close Crash Bug2590 | * slicer Close Crash Bug2590 | ||
| − | |||
* Charting | * Charting | ||
* Scene Performance | * Scene Performance | ||
| Line 463: | Line 449: | ||
* Add Many Markups Fiducial Test | * Add Many Markups Fiducial Test | ||
* Neurosurgical Planning Tutorial Markups Self Test | * Neurosurgical Planning Tutorial Markups Self Test | ||
| − | |||
* Markups In Views Self Test | * Markups In Views Self Test | ||
* Change Tracker Self Test | * Change Tracker Self Test | ||
| Line 473: | Line 458: | ||
* BRAINSDWICleanup | * BRAINSDWICleanup | ||
== Utilities == | == Utilities == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ThingiverseBrowser Thingiverse Browser] |
* EMSegment Transform To New Format | * EMSegment Transform To New Format | ||
| − | * | + | * Data Store |
=== BRAINS === | === BRAINS === | ||
* BRAINSTransform Convert | * BRAINSTransform Convert | ||
== Wizards == | == Wizards == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Compare Volumes] |
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ChangeTracker Change Tracker] |
== Work in Progress == | == Work in Progress == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT Longitudinal PETCT] |
| − | |||
| − | |||
=== Informatics === | === Informatics === | ||
| − | |||
==== TestCases ==== | ==== TestCases ==== | ||
* Reporting Self Test | * Reporting Self Test | ||
| − | |||
== XNATSlicer == | == XNATSlicer == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/XNATSlicer Xnat Slicer] |
= Modules by contributing organization = | = Modules by contributing organization = | ||
| − | + | 60 contributing organizations: | |
* [[#Asclepios_INRIA|Asclepios INRIA]] | * [[#Asclepios_INRIA|Asclepios INRIA]] | ||
* [[#AZE_R_D|AZE R&D]] | * [[#AZE_R_D|AZE R&D]] | ||
| Line 518: | Line 499: | ||
* [[#MSC.2FNLM|MSC/NLM]] | * [[#MSC.2FNLM|MSC/NLM]] | ||
* [[#Noware|Noware]] | * [[#Noware|Noware]] | ||
| − | |||
* [[#PerkLab_at_Queen_s_University|Perk Lab at Queen's University]] | * [[#PerkLab_at_Queen_s_University|Perk Lab at Queen's University]] | ||
* [[#PerkLab.2C_Queen_s|Perk Lab, Queen's]] | * [[#PerkLab.2C_Queen_s|Perk Lab, Queen's]] | ||
| Line 537: | Line 517: | ||
* [[#Stony_Brook_University|Stony Brook University]] | * [[#Stony_Brook_University|Stony Brook University]] | ||
* [[#SUMS|SUMS]] | * [[#SUMS|SUMS]] | ||
| − | |||
* [[#UAB|UAB]] | * [[#UAB|UAB]] | ||
* [[#Uiowa|Uiowa]] | * [[#Uiowa|Uiowa]] | ||
| Line 556: | Line 535: | ||
* [[#while_at_GE|while at GE]] | * [[#while_at_GE|while at GE]] | ||
== Asclepios INRIA == | == Asclepios INRIA == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PBNRR PBNRR] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PBNRR PBNRR] extension)</small> |
== AZE R&D == | == AZE R&D == | ||
* JRC2013Vis | * JRC2013Vis | ||
== Brigham and Women's Hospital == | == Brigham and Women's Hospital == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CornerAnnotation Corner Annotation] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CornerAnnotation Corner Annotation] extension)</small> |
| − | |||
* test tractography display | * test tractography display | ||
== BWH == | == BWH == | ||
* Add Many Markups Fiducial Test | * Add Many Markups Fiducial Test | ||
* Change Tracker Self Test | * Change Tracker Self Test | ||
| − | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CurveMaker Curve Maker] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CurveMaker Curve Maker] extension)</small> | |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DiceComputation Dice Computation] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DiceComputation Dice Computation] extension)</small> |
| − | * [ | + | * DICOMRWVMPlugin |
| − | * | ||
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] <small>(scripted, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] <small>(scripted, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> | ||
* Fiducial Layout Switch Bug1914 | * Fiducial Layout Switch Bug1914 | ||
| − | * | + | * Markups <small>(loadable, built-in)</small> |
* Markups In Compare Viewers Self Test | * Markups In Compare Viewers Self Test | ||
* Markups In Views Self Test | * Markups In Views Self Test | ||
* Neurosurgical Planning Tutorial Markups Self Test | * Neurosurgical Planning Tutorial Markups Self Test | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small> |
* Volume Rendering Scene Close <small>(scripted, built-in)</small> | * Volume Rendering Scene Close <small>(scripted, built-in)</small> | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/WindowLevelEffect Window Level Effect] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/WindowLevelEffect Window Level Effect] extension)</small> |
== BWH, SPL == | == BWH, SPL == | ||
| − | * | + | * Crop Volume <small>(loadable, built-in)</small> |
== BWH, SUMS == | == BWH, SUMS == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CornerAnnotation Corner Annotation] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CornerAnnotation Corner Annotation] extension)</small> |
== BWH/UAB == | == BWH/UAB == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small> |
== College of Information Engineering, Zhejiang University of Technology, Hangzhou, China); Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China == | == College of Information Engineering, Zhejiang University of Technology, Hangzhou, China); Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/GyroGuide Gyro Guide] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/GyroGuide Gyro Guide] extension)</small> |
== CRTC == | == CRTC == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion Body Centric Cubic Mesh] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion CBC 3D I2MConversion] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion Mesh Compression] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion CBC 3D I2MConversion] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PBNRR PBNRR] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PBNRR PBNRR] extension)</small> |
== gatech == | == gatech == | ||
| − | * | + | * Robust Statistics Segmenter <small>(cli, built-in)</small> |
== GE == | == GE == | ||
| − | * | + | * Add Scalar Volumes <small>(cli, built-in)</small> |
* Charting <small>(scripted, built-in)</small> | * Charting <small>(scripted, built-in)</small> | ||
| − | * | + | * Checker Board Filter <small>(cli, built-in)</small> |
| − | * | + | * Create DICOMSeries <small>(cli, built-in)</small> |
| − | * | + | * Curvature Anisotropic Diffusion <small>(cli, built-in)</small> |
* Diffusion Tensor Test <small>(cli, built-in)</small> | * Diffusion Tensor Test <small>(cli, built-in)</small> | ||
* DWIConvert <small>(cli, built-in)</small> | * DWIConvert <small>(cli, built-in)</small> | ||
| − | * | + | * Execution Model Tour <small>(cli, built-in)</small> |
| − | * | + | * Gradient Anisotropic Diffusion <small>(cli, built-in)</small> |
| − | * | + | * Grayscale Fill Hole Image Filter <small>(cli, built-in)</small> |
| − | * | + | * Grayscale Grind Peak Image Filter <small>(cli, built-in)</small> |
| − | * | + | * Grayscale Model Maker <small>(cli, built-in)</small> |
| − | * | + | * Histogram Matching <small>(cli, built-in)</small> |
| − | * | + | * Label Map Smoothing <small>(cli, built-in)</small> |
| − | * | + | * Median Image Filter <small>(cli, built-in)</small> |
| − | * | + | * Model Maker <small>(cli, built-in)</small> |
| − | * | + | * Model To Label Map <small>(cli, built-in)</small> |
| − | * | + | * Multiply Scalar Volumes <small>(cli, built-in)</small> |
| − | * | + | * Orient Scalar Volume <small>(cli, built-in)</small> |
| − | * | + | * Otsu Threshold Image Filter <small>(cli, built-in)</small> |
| − | * [ | + | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] <small>(cli, bundled in [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] extension)</small> |
| − | * | + | * Resample Scalar Volume <small>(cli, built-in)</small> |
| − | * | + | * Simple Region Growing Segmentation <small>(cli, built-in)</small> |
* Slice Link Logic <small>(scripted, built-in)</small> | * Slice Link Logic <small>(scripted, built-in)</small> | ||
* Slicer4Minute <small>(scripted, built-in)</small> | * Slicer4Minute <small>(scripted, built-in)</small> | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM Spacing Aware Curvature Diffusion] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEM] extension)</small> |
| − | * | + | * Subtract Scalar Volumes <small>(cli, built-in)</small> |
| − | * | + | * View Controllers <small>(loadable, built-in)</small> |
* View Controllers Slice Interpolation Bug1926 | * View Controllers Slice Interpolation Bug1926 | ||
| − | * | + | * Voting Binary Hole Filling Image Filter <small>(cli, built-in)</small> |
== Georgia Institute of Technology == | == Georgia Institute of Technology == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice Effect] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice Effect] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
| Line 629: | Line 606: | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
== IBM == | == IBM == | ||
| − | * | + | * Annotations <small>(loadable, built-in)</small> |
== Isomics == | == Isomics == | ||
* Atlas Tests | * Atlas Tests | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM Binary Watershed Effect] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEM] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Compare Volumes] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * | + | * Data <small>(loadable, built-in)</small> |
| − | * | + | * Data Probe <small>(scripted, built-in)</small> |
| − | + | * Editor <small>(scripted, built-in)</small> | |
| − | * | + | * Endoscopy <small>(scripted, built-in)</small> |
| − | * | ||
* fiber visibility crash2438 | * fiber visibility crash2438 | ||
| − | * | + | * Fiber Bundle To Label Map <small>(scripted, built-in)</small> |
| − | * | + | * Label Statistics <small>(scripted, built-in)</small> |
* label Toggle Bug2049 | * label Toggle Bug2049 | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Landmark Registration] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * | + | * Models <small>(loadable, built-in)</small> |
* Performance Tests | * Performance Tests | ||
| − | |||
* RSNA2012Prostate Demo | * RSNA2012Prostate Demo | ||
* RSNAQuant Tutorial | * RSNAQuant Tutorial | ||
* RSNAVis Tutorial | * RSNAVis Tutorial | ||
| − | * | + | * Sample Data <small>(scripted, built-in)</small> |
* scene Import2428 | * scene Import2428 | ||
* Self Tests | * Self Tests | ||
| − | * | + | * Simple Filters <small>(scripted, built-in)</small> |
* slicer Close Crash Bug2590 | * slicer Close Crash Bug2590 | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SlicerToKiwiExporter Slicer To Kiwi Exporter] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SlicerToKiwiExporter Slicer To Kiwi Exporter] extension)</small> |
* Tractography Interactive Seeding <small>(loadable, built-in)</small> | * Tractography Interactive Seeding <small>(loadable, built-in)</small> | ||
| − | * | + | * Transforms <small>(loadable, built-in)</small> |
| − | * | + | * View Controllers <small>(loadable, built-in)</small> |
| − | + | * Volume Rendering <small>(loadable, built-in)</small> | |
| − | * | + | * Volumes <small>(loadable, built-in)</small> |
| − | * | ||
== Isomics Inc. == | == Isomics Inc. == | ||
* DICOMDiffusion Volume Plugin | * DICOMDiffusion Volume Plugin | ||
| Line 672: | Line 646: | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice Effect] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice Effect] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
== Isomics, pieper@isomics.com == | == Isomics, pieper@isomics.com == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/XNATSlicer Xnat Slicer] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/XNATSlicer XNATSlicer] extension)</small> |
== Kitware == | == Kitware == | ||
| − | * | + | * Cameras <small>(loadable, built-in)</small> |
| − | * | + | * Colors <small>(loadable, built-in)</small> |
| − | * | + | * Data <small>(loadable, built-in)</small> |
| − | * | + | * Data Store <small>(loadable, built-in)</small> |
* Double Arrays <small>(loadable, built-in)</small> | * Double Arrays <small>(loadable, built-in)</small> | ||
| − | * | + | * Event Broker |
| − | * | + | * Expert Automated Registration <small>(cli, built-in)</small> |
| − | * | + | * Extension Wizard <small>(scripted, built-in)</small> |
| − | * | + | * Extract Skeleton <small>(cli, built-in)</small> |
| − | * [ | + | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut] <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> |
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
* fiber visibility crash2438 | * fiber visibility crash2438 | ||
| − | * | + | * Fiducial Registration <small>(cli, built-in)</small> |
| − | * | + | * Gaussian Blur Image Filter <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ImageMaker Image Maker] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ImageMaker Image Maker] extension)</small> |
* label Toggle Bug2049 | * label Toggle Bug2049 | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Commander] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Bridge] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Module Generator] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Bridge] extension)</small> |
| − | * | + | * Models <small>(loadable, built-in)</small> |
| − | * | + | * Multi Volume Explorer <small>(loadable, built-in)</small> |
| − | * | + | * Multi Volume Importer <small>(scripted, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PortPlacement Port Placement] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PortPlacement Port Placement] extension)</small> |
| − | * | + | * Reformat <small>(loadable, built-in)</small> |
| − | * | + | * Sample Data <small>(scripted, built-in)</small> |
* Scene Performance <small>(scripted, built-in)</small> | * Scene Performance <small>(scripted, built-in)</small> | ||
| − | * | + | * Simple Filters <small>(scripted, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SlicerToKiwiExporter Slicer To Kiwi Exporter] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SlicerToKiwiExporter Slicer To Kiwi Exporter] extension)</small> |
| − | * | + | * Threshold Scalar Volume <small>(cli, built-in)</small> |
| − | * | + | * Tractography Display <small>(loadable, built-in)</small> |
| − | * | + | * Transforms <small>(loadable, built-in)</small> |
| − | * | + | * Units <small>(loadable, built-in)</small> |
| − | * | + | * View Controllers <small>(loadable, built-in)</small> |
| − | * | + | * Volume Rendering <small>(loadable, built-in)</small> |
| − | * | + | * Volumes <small>(loadable, built-in)</small> |
| − | * | + | * Welcome <small>(loadable, built-in)</small> |
== Kitware) == | == Kitware) == | ||
| − | * [ | + | * [http://www.nitrc.org/projects/finslertract/ Finsler Backtracing] <small>(cli, bundled in [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] extension)</small> |
| − | * [ | + | * [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] <small>(cli, bundled in [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] extension)</small> |
== MGH == | == MGH == | ||
| − | * [ | + | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] <small>(cli, bundled in [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] extension)</small> |
== Moka Creative, LLC, kumar.sunil.p@gmail.com == | == Moka Creative, LLC, kumar.sunil.p@gmail.com == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/XNATSlicer Xnat Slicer] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/XNATSlicer XNATSlicer] extension)</small> |
== MSC/NLM == | == MSC/NLM == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM Label Object Statistics] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEM] extension)</small> |
| − | * | + | * Simple Filters <small>(scripted, built-in)</small> |
== Noware == | == Noware == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SwissSkullStripper Swiss Skull Stripper] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SwissSkullStripper Swiss Skull Stripper] extension)</small> |
| − | |||
| − | |||
== PerkLab at Queen's University == | == PerkLab at Queen's University == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PyDevRemoteDebug Py Dev Remote Debug] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PyDevRemoteDebug Py Dev Remote Debug] extension)</small> |
== PerkLab, Queen's == | == PerkLab, Queen's == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Metafile Importer] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Multidim Data] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Sequence Browser] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Multidim Data] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Sequences] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Multidim Data] extension)</small> |
| − | * | + | * Transforms <small>(loadable, built-in)</small> |
== PerkLab, Queen's University == | == PerkLab, Queen's University == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Commander] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Bridge] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Module Generator] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Bridge] extension)</small> |
| − | |||
== PMH == | == PMH == | ||
| − | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Sequence Browser] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Multidim Data] extension)</small> | |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Sequences] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Multidim Data] extension)</small> |
| − | * [ | ||
== Queen's == | == Queen's == | ||
| − | * | + | * Data <small>(loadable, built-in)</small> |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | ||
| − | * | + | * Subject Hierarchy <small>(loadable, built-in)</small> |
| − | |||
| − | |||
== Queen's University == | == Queen's University == | ||
| − | * [ | + | * [http://www.perktutor.org/ Perk Evaluator] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> |
| − | * [ | + | * [http://www.perktutor.org/ Python Metrics Calculator] <small>(scripted, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> |
| − | * [ | + | * [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis Monitoring] <small>(scripted, bundled in [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis] extension)</small> |
| − | * [ | + | * [https://www.assembla.com/spaces/Scoliosis/wiki Spinal Curvature Measurement] <small>(scripted, bundled in [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis] extension)</small> |
| − | * [ | + | * [http://www.perktutor.org/ Transform Recorder] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> |
| − | + | * [http://www.perktutor.org/ Workflow Segmentation] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> | |
| − | * [ | ||
== Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto == | == Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Commander] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Bridge] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Module Generator] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Bridge] extension)</small> |
== SAIC-Frederick, NCI-Frederick == | == SAIC-Frederick, NCI-Frederick == | ||
| − | * | + | * Volume Rendering <small>(loadable, built-in)</small> |
== SBU == | == SBU == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] extension)</small> |
== SCI Institute == | == SCI Institute == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CleaverExtension Cleaver CLI] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CleaverExtension Cleaver Extension] extension)</small> |
== Shiga University of Medical Science, Japan, SPL == | == Shiga University of Medical Science, Japan, SPL == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/PercutaneousApproachAnalysis Percutaneous Approach Analysis] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/PercutaneousApproachAnalysis Percutaneous Approach Analysis] extension)</small> |
== SNR == | == SNR == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/TrackerStabilizer Tracker Stabilizer] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/TrackerStabilizer Tracker Stabilizer] extension)</small> |
== SPL == | == SPL == | ||
* DICOM2Full Brain Tractography <small>(scripted, built-in)</small> | * DICOM2Full Brain Tractography <small>(scripted, built-in)</small> | ||
| − | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/PercutaneousApproachAnalysis Percutaneous Approach Analysis] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/PercutaneousApproachAnalysis Percutaneous Approach Analysis] extension)</small> | |
| − | * [ | + | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] <small>(cli, bundled in [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] extension)</small> |
| − | * [ | ||
* Reporting Self Test | * Reporting Self Test | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/TrackerStabilizer Tracker Stabilizer] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/TrackerStabilizer Tracker Stabilizer] extension)</small> |
== SPL B&W Harvard == | == SPL B&W Harvard == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PBNRR PBNRR] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PBNRR PBNRR] extension)</small> |
== SPL, BWH == | == SPL, BWH == | ||
| − | * | + | * ACPCTransform <small>(cli, built-in)</small> |
| − | * | + | * Annotations <small>(loadable, built-in)</small> |
| − | * | + | * BSpline To Deformation Field <small>(cli, built-in)</small> |
| − | * | + | * Cast Scalar Volume <small>(cli, built-in)</small> |
| − | * | + | * Colors <small>(loadable, built-in)</small> |
| − | * | + | * Data <small>(loadable, built-in)</small> |
| − | * | + | * Diffusion Tensor Scalar Measurements <small>(cli, built-in)</small> |
| − | * | + | * Diffusion Weighted Volume Masking <small>(cli, built-in)</small> |
* DTIexport <small>(cli, built-in)</small> | * DTIexport <small>(cli, built-in)</small> | ||
* DTIimport <small>(cli, built-in)</small> | * DTIimport <small>(cli, built-in)</small> | ||
| − | * | + | * DWITo DTIEstimation <small>(cli, built-in)</small> |
| − | * | + | * Fiber Tract Measurements <small>(cli, built-in)</small> |
| − | * | + | * Fiducial Registration <small>(cli, built-in)</small> |
| − | * | + | * Grayscale Model Maker <small>(cli, built-in)</small> |
| − | * | + | * Image Label Combine <small>(cli, built-in)</small> |
| − | * | + | * Mask Scalar Volume <small>(cli, built-in)</small> |
| − | * | + | * Merge Models <small>(cli, built-in)</small> |
| − | * | + | * Model Maker <small>(cli, built-in)</small> |
| − | * | + | * Models <small>(loadable, built-in)</small> |
| − | * | + | * Model To Label Map <small>(cli, built-in)</small> |
| − | * | + | * Multi Volume Explorer <small>(loadable, built-in)</small> |
| − | * | + | * Multi Volume Importer <small>(scripted, built-in)</small> |
| − | * | + | * N4ITKBias Field Correction <small>(cli, built-in)</small> |
| − | * [ | + | * PETStandard Uptake Value Computation <small>(cli, built-in)</small> |
| − | * | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT PETSUVImage Maker] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT Longitudinal PETCT] extension)</small> |
| − | * | + | * Probe Volume With Model <small>(cli, built-in)</small> |
| − | + | * Robust Statistics Segmenter <small>(cli, built-in)</small> | |
| − | * | + | * Scene Views <small>(loadable, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM SUVFactor Calculator] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] extension)</small> |
* Test Grid Transform Registration <small>(cli, built-in)</small> | * Test Grid Transform Registration <small>(cli, built-in)</small> | ||
| − | * | + | * Threshold Scalar Volume <small>(cli, built-in)</small> |
| − | * | + | * Tractography Label Map Seeding <small>(cli, built-in)</small> |
| − | * | + | * View Controllers <small>(loadable, built-in)</small> |
| − | * | + | * Volume Rendering <small>(loadable, built-in)</small> |
| − | * | + | * Volumes <small>(loadable, built-in)</small> |
| − | * | + | * Welcome <small>(loadable, built-in)</small> |
== SPL, BWH, UPenn == | == SPL, BWH, UPenn == | ||
| − | * | + | * Merge Models <small>(cli, built-in)</small> |
== Stony Brook University == | == Stony Brook University == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice Effect] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice Effect] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] <small>(scripted, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] <small>(scripted, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> | ||
== SUMS == | == SUMS == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CornerAnnotation Corner Annotation] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CornerAnnotation Corner Annotation] extension)</small> |
| − | |||
| − | |||
== UAB == | == UAB == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SobolevSegmenter Sobolev Segmenter] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SobolevSegmenter Sobolev Segmenter] extension)</small> |
== Uiowa == | == Uiowa == | ||
* DWIConvert <small>(cli, built-in)</small> | * DWIConvert <small>(cli, built-in)</small> | ||
| Line 830: | Line 794: | ||
* DWIConvert <small>(cli, built-in)</small> | * DWIConvert <small>(cli, built-in)</small> | ||
== UNC == | == UNC == | ||
| − | * | + | * DWIRician LMMSEFilter <small>(cli, built-in)</small> |
| − | * | + | * Extract Skeleton <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] <small>(cli, bundled in [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PortPlacement Port Placement] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PortPlacement Port Placement] extension)</small> |
| − | * | + | * Resample DTIVolume <small>(cli, built-in)</small> |
| − | * | + | * Resample Scalar Vector DWIVolume <small>(cli, built-in)</small> |
== Univ of Michigan == | == Univ of Michigan == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Surface Registration] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
== Univ. of Iowa == | == Univ. of Iowa == | ||
| − | * | + | * DICOMPETSUVPlugin |
| − | * | + | * DICOMRWVMPlugin |
== University College Cork == | == University College Cork == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation CLI] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation] extension)</small> |
== University of Alabama Birmingham == | == University of Alabama Birmingham == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice Effect] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice Effect] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] <small>(scripted, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] <small>(scripted, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> | ||
== University of Heidelberg == | == University of Heidelberg == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT Longitudinal PETCT] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT Longitudinal PETCT] extension)</small> |
== University of Iowa == | == University of Iowa == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT PETSUVImage Maker] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT Longitudinal PETCT] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM SUVFactor Calculator] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small> |
== University of Iowa) and Andrey Fedorov (SPL == | == University of Iowa) and Andrey Fedorov (SPL == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT Longitudinal PETCT] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT Longitudinal PETCT] extension)</small> |
== UPenn == | == UPenn == | ||
| − | * | + | * Annotations <small>(loadable, built-in)</small> |
* EMSegment <small>(loadable, built-in)</small> | * EMSegment <small>(loadable, built-in)</small> | ||
| − | * | + | * N4ITKBias Field Correction <small>(cli, built-in)</small> |
| − | * | + | * Scene Views <small>(loadable, built-in)</small> |
== Utah == | == Utah == | ||
| − | * | + | * Label Map Smoothing <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small> |
== UVa == | == UVa == | ||
| − | * | + | * DWIJoint Rician LMMSEFilter <small>(cli, built-in)</small> |
| − | * | + | * DWIRician LMMSEFilter <small>(cli, built-in)</small> |
| − | * | + | * DWIUnbiased Non Local Means Filter <small>(cli, built-in)</small> |
== UWA == | == UWA == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ThingiverseBrowser Thingiverse Browser] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ThingiverseBrowser Thingiverse Browser] extension)</small> |
== WashU-St. Louis, dmarcus@wustl.edu == | == WashU-St. Louis, dmarcus@wustl.edu == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/XNATSlicer Xnat Slicer] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/XNATSlicer XNATSlicer] extension)</small> |
== while at GE == | == while at GE == | ||
| − | * [ | + | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] <small>(cli, bundled in [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] extension)</small> |
= Modules by contributing individual = | = Modules by contributing individual = | ||
| − | + | 146 contributing individuals: | |
* [[#Akila_Viswanathan|Akila Viswanathan]] | * [[#Akila_Viswanathan|Akila Viswanathan]] | ||
* [[#Alan_Morris|Alan Morris]] <small>(Utah)</small> | * [[#Alan_Morris|Alan Morris]] <small>(Utah)</small> | ||
| Line 946: | Line 910: | ||
* [[#Liang-Jia_Zhu|Liang-Jia Zhu]] <small>(UAB)</small> | * [[#Liang-Jia_Zhu|Liang-Jia Zhu]] <small>(UAB)</small> | ||
* [[#Liangjia_Zhu|Liangjia Zhu]] <small>(Stony Brook University)</small> | * [[#Liangjia_Zhu|Liangjia Zhu]] <small>(Stony Brook University)</small> | ||
| − | |||
* [[#Luis_G._Torres|Luis G. Torres]] <small>(UNC)</small> | * [[#Luis_G._Torres|Luis G. Torres]] <small>(UNC)</small> | ||
* [[#Luping_Fang|Luping Fang]] <small>(College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)</small> | * [[#Luping_Fang|Luping Fang]] <small>(College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)</small> | ||
| Line 955: | Line 918: | ||
* [[#Martin_Styner|Martin Styner]] <small>(UNC)</small> | * [[#Martin_Styner|Martin Styner]] <small>(UNC)</small> | ||
* [[#Mason_Winsauer|Mason Winsauer]] | * [[#Mason_Winsauer|Mason Winsauer]] | ||
| − | |||
* [[#Matthew_Holden|Matthew Holden]] <small>(Queen's University)</small> | * [[#Matthew_Holden|Matthew Holden]] <small>(Queen's University)</small> | ||
* [[#Matthew_S._Holden|Matthew S. Holden]] <small>(Queen's University)</small> | * [[#Matthew_S._Holden|Matthew S. Holden]] <small>(Queen's University)</small> | ||
| Line 1,004: | Line 966: | ||
* [[#Tohru_Tani|Tohru Tani]] <small>(SUMS)</small> | * [[#Tohru_Tani|Tohru Tani]] <small>(SUMS)</small> | ||
* [[#UNC_Medical_School|UNC Medical School]] | * [[#UNC_Medical_School|UNC Medical School]] | ||
| + | * [[#UofM_School_of_Dentistry|Uof M School of Dentistry]] | ||
* [[#UofM_School_Of_Dentistry|Uof M School Of Dentistry]] | * [[#UofM_School_Of_Dentistry|Uof M School Of Dentistry]] | ||
| − | |||
* [[#Vince_Magnotta|Vince Magnotta]] <small>(UIowa)</small> | * [[#Vince_Magnotta|Vince Magnotta]] <small>(UIowa)</small> | ||
* [[#Vincent_A._Magnotta|Vincent A. Magnotta]] | * [[#Vincent_A._Magnotta|Vincent A. Magnotta]] | ||
| Line 1,023: | Line 985: | ||
* [[#Yumin_Yuan|Yumin Yuan]] | * [[#Yumin_Yuan|Yumin Yuan]] | ||
== Akila Viswanathan == | == Akila Viswanathan == | ||
| − | * [ | + | * [https://github.com/gpernelle/iGyne i Gyne] <small>(scripted, bundled in [https://github.com/gpernelle/iGyne i Gyne] extension)</small> |
| − | * [ | + | * [https://github.com/gpernelle/NeedleFinder Needle Finder] <small>(scripted, bundled in [https://github.com/gpernelle/NeedleFinder Needle Finder] extension)</small> |
== Alan Morris == | == Alan Morris == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small> |
== Alex Yarmakovich == | == Alex Yarmakovich == | ||
| − | * | + | * Models <small>(loadable, built-in)</small> |
* Tractography Interactive Seeding <small>(loadable, built-in)</small> | * Tractography Interactive Seeding <small>(loadable, built-in)</small> | ||
== Alex Yarmarkovich == | == Alex Yarmarkovich == | ||
| − | * | + | * Data <small>(loadable, built-in)</small> |
| − | * [ | + | * Fiber Tract Measurements <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.nitrc.org/projects/finslertract/ Finsler Backtracing] <small>(cli, bundled in [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] extension)</small> |
| − | * | + | * [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] <small>(cli, bundled in [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] extension)</small> |
| − | * | + | * Image Label Combine <small>(cli, built-in)</small> |
| − | * | + | * Transforms <small>(loadable, built-in)</small> |
| − | * | + | * Volume Rendering <small>(loadable, built-in)</small> |
| + | * Volumes <small>(loadable, built-in)</small> | ||
== Ali Ghayoor == | == Ali Ghayoor == | ||
* BRAINSTransform Convert <small>(cli, built-in)</small> | * BRAINSTransform Convert <small>(cli, built-in)</small> | ||
* Perform Metric Test <small>(cli, built-in)</small> | * Perform Metric Test <small>(cli, built-in)</small> | ||
== Alireza Mehrtash == | == Alireza Mehrtash == | ||
| − | * [ | + | * [https://github.com/gpernelle/iGyne i Gyne] <small>(scripted, bundled in [https://github.com/gpernelle/iGyne i Gyne] extension)</small> |
| − | * [ | + | * [https://github.com/gpernelle/NeedleFinder Needle Finder] <small>(scripted, bundled in [https://github.com/gpernelle/NeedleFinder Needle Finder] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] extension)</small> |
== Allen Tannenbaum == | == Allen Tannenbaum == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice Effect] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice Effect] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] <small>(scripted, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] <small>(scripted, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] extension)</small> |
| − | * | + | * Robust Statistics Segmenter <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SobolevSegmenter Sobolev Segmenter] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SobolevSegmenter Sobolev Segmenter] extension)</small> |
== Analysis Laboratory == | == Analysis Laboratory == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Apply Matrix] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Downsize] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Growing] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Label Addition] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Label Extraction] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Mask Creation] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Non Growing] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
== Andinet Enquobahrie == | == Andinet Enquobahrie == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PortPlacement Port Placement] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PortPlacement Port Placement] extension)</small> |
== Andras Lasso == | == Andras Lasso == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Commander] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Bridge] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Module Generator] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Bridge] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Metafile Importer] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Multidim Data] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PyDevRemoteDebug Py Dev Remote Debug] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PyDevRemoteDebug Py Dev Remote Debug] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Sequence Browser] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Multidim Data] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Sequences] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Multidim Data] extension)</small> |
| − | * | + | * Transforms <small>(loadable, built-in)</small> |
| − | |||
| − | |||
== Andreas Freudling == | == Andreas Freudling == | ||
| − | * | + | * Volume Rendering <small>(loadable, built-in)</small> |
== Andrey Fedorov == | == Andrey Fedorov == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion Body Centric Cubic Mesh] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion CBC 3D I2MConversion] extension)</small> |
| − | * | + | * BSpline To Deformation Field <small>(cli, built-in)</small> |
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ChangeTracker Change Tracker] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ChangeTracker Change Tracker] extension)</small> |
* Change Tracker Self Test | * Change Tracker Self Test | ||
| − | * | + | * Crop Volume <small>(loadable, built-in)</small> |
| − | * [ | + | * DICOMRWVMPlugin |
| − | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ChangeTracker Intensity Difference Metric] <small>(cli, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ChangeTracker Change Tracker] extension)</small> | |
| − | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion Mesh Compression] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion CBC 3D I2MConversion] extension)</small> | |
| − | * [ | + | * Multi Volume Explorer <small>(loadable, built-in)</small> |
| − | + | * Multi Volume Importer <small>(scripted, built-in)</small> | |
| − | |||
| − | * | ||
| − | * | ||
* Multi Volume Importer Plugin | * Multi Volume Importer Plugin | ||
| − | * | + | * N4ITKBias Field Correction <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PBNRR PBNRR] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PBNRR PBNRR] extension)</small> |
| − | * [ | + | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] <small>(cli, bundled in [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] extension)</small> |
| − | |||
* Reporting Self Test | * Reporting Self Test | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM SUVFactor Calculator] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/WindowLevelEffect Window Level Effect] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/WindowLevelEffect Window Level Effect] extension)</small> |
== Andriy Kot == | == Andriy Kot == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PBNRR PBNRR] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PBNRR PBNRR] extension)</small> |
== Anonymous == | == Anonymous == | ||
* CLIROITest <small>(cli, built-in)</small> | * CLIROITest <small>(cli, built-in)</small> | ||
* EMSegment Transform To New Format <small>(cli, built-in)</small> | * EMSegment Transform To New Format <small>(cli, built-in)</small> | ||
== Antonio Damato == | == Antonio Damato == | ||
| − | * [ | + | * [https://github.com/gpernelle/iGyne i Gyne] <small>(scripted, bundled in [https://github.com/gpernelle/iGyne i Gyne] extension)</small> |
| − | * [ | + | * [https://github.com/gpernelle/NeedleFinder Needle Finder] <small>(scripted, bundled in [https://github.com/gpernelle/NeedleFinder Needle Finder] extension)</small> |
== Antonio Tristan Vega == | == Antonio Tristan Vega == | ||
| − | * | + | * DWIJoint Rician LMMSEFilter <small>(cli, built-in)</small> |
| − | * | + | * DWIRician LMMSEFilter <small>(cli, built-in)</small> |
| − | * | + | * DWIUnbiased Non Local Means Filter <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.nitrc.org/projects/finslertract/ Finsler Backtracing] <small>(cli, bundled in [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] extension)</small> |
| − | * [ | + | * [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] <small>(cli, bundled in [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] extension)</small> |
== Arie Nakhmani == | == Arie Nakhmani == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SobolevSegmenter Sobolev Segmenter] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SobolevSegmenter Sobolev Segmenter] extension)</small> |
== Atsushi Yamada == | == Atsushi Yamada == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CornerAnnotation Corner Annotation] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CornerAnnotation Corner Annotation] extension)</small> |
== Beatriz Paniagua from Department of Orthodontics == | == Beatriz Paniagua from Department of Orthodontics == | ||
| − | * [ | + | * [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] <small>(cli, bundled in [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] extension)</small> |
== Benjamin Long == | == Benjamin Long == | ||
| − | * | + | * Sample Data <small>(scripted, built-in)</small> |
== Bill Lorensen == | == Bill Lorensen == | ||
| − | * | + | * Add Scalar Volumes <small>(cli, built-in)</small> |
| − | * | + | * Checker Board Filter <small>(cli, built-in)</small> |
| − | * | + | * Create DICOMSeries <small>(cli, built-in)</small> |
| − | * | + | * Curvature Anisotropic Diffusion <small>(cli, built-in)</small> |
* Diffusion Tensor Test <small>(cli, built-in)</small> | * Diffusion Tensor Test <small>(cli, built-in)</small> | ||
| − | * | + | * Execution Model Tour <small>(cli, built-in)</small> |
| − | * | + | * Gradient Anisotropic Diffusion <small>(cli, built-in)</small> |
| − | * | + | * Grayscale Fill Hole Image Filter <small>(cli, built-in)</small> |
| − | * | + | * Grayscale Grind Peak Image Filter <small>(cli, built-in)</small> |
| − | * | + | * Grayscale Model Maker <small>(cli, built-in)</small> |
| − | * | + | * Histogram Matching <small>(cli, built-in)</small> |
| − | * | + | * Median Image Filter <small>(cli, built-in)</small> |
| − | * | + | * Model Maker <small>(cli, built-in)</small> |
| − | * | + | * Multiply Scalar Volumes <small>(cli, built-in)</small> |
| − | * | + | * Orient Scalar Volume <small>(cli, built-in)</small> |
| − | * | + | * Otsu Threshold Image Filter <small>(cli, built-in)</small> |
| − | * | + | * Resample Scalar Volume <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM Spacing Aware Curvature Diffusion] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEM] extension)</small> |
| − | * | + | * Subtract Scalar Volumes <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SwissSkullStripper Swiss Skull Stripper] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SwissSkullStripper Swiss Skull Stripper] extension)</small> |
| − | * | + | * Voting Binary Hole Filling Image Filter <small>(cli, built-in)</small> |
== Brad Davis == | == Brad Davis == | ||
* EMSegment Command Line <small>(cli, built-in)</small> | * EMSegment Command Line <small>(cli, built-in)</small> | ||
== Bradley Lowekamp == | == Bradley Lowekamp == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM Bin Shrink] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEM] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM Double Threshold Effect] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEM] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEMImport] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEM] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEMImport Series] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEM] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM Label Object Statistics] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEM] extension)</small> |
| − | * | + | * Simple Filters <small>(scripted, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM Spacing Aware Curvature Diffusion] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEM] extension)</small> |
== BWH == | == BWH == | ||
| − | |||
* Multi Volume Importer Plugin | * Multi Volume Importer Plugin | ||
== Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez == | == Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez == | ||
| − | * [ | + | * [http://www.nitrc.org/projects/finslertract/ Finsler Backtracing] <small>(cli, bundled in [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] extension)</small> |
| − | * [ | + | * [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] <small>(cli, bundled in [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] extension)</small> |
== Casey B Goodlett == | == Casey B Goodlett == | ||
| − | * | + | * Expert Automated Registration <small>(cli, built-in)</small> |
| − | * | + | * Fiducial Registration <small>(cli, built-in)</small> |
== Charles Marion == | == Charles Marion == | ||
| − | * | + | * Data Store <small>(loadable, built-in)</small> |
== Csaba Pinter == | == Csaba Pinter == | ||
| − | * | + | * Data <small>(loadable, built-in)</small> |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | ||
| − | * | + | * Subject Hierarchy <small>(loadable, built-in)</small> |
| − | |||
| − | |||
== Dan Marcus == | == Dan Marcus == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/XNATSlicer Xnat Slicer] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/XNATSlicer XNATSlicer] extension)</small> |
== Daniel Blezek == | == Daniel Blezek == | ||
| − | * | + | * Execution Model Tour <small>(cli, built-in)</small> |
== Daniel Haehn == | == Daniel Haehn == | ||
| − | * | + | * Annotations <small>(loadable, built-in)</small> |
* EMSegment <small>(loadable, built-in)</small> | * EMSegment <small>(loadable, built-in)</small> | ||
* EMSegment Command Line <small>(cli, built-in)</small> | * EMSegment Command Line <small>(cli, built-in)</small> | ||
| − | * | + | * Merge Models <small>(cli, built-in)</small> |
| − | * | + | * Scene Views <small>(loadable, built-in)</small> |
== Danny Perry == | == Danny Perry == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small> |
== Demian Wassermann == | == Demian Wassermann == | ||
* DICOM2Full Brain Tractography <small>(scripted, built-in)</small> | * DICOM2Full Brain Tractography <small>(scripted, built-in)</small> | ||
| − | * | + | * Diffusion Weighted Volume Masking <small>(cli, built-in)</small> |
* Fiber Bundle Label Select <small>(cli, built-in)</small> | * Fiber Bundle Label Select <small>(cli, built-in)</small> | ||
| − | * [ | + | * [http://www.nitrc.org/projects/finslertract/ Finsler Backtracing] <small>(cli, bundled in [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] extension)</small> |
| − | * [ | + | * [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] <small>(cli, bundled in [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] extension)</small> |
* test tractography display | * test tractography display | ||
| − | * | + | * Tractography Label Map Seeding <small>(cli, built-in)</small> |
== Dinggang Shen == | == Dinggang Shen == | ||
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MABMIS IGR3D MABMIS Testing] <small>(cli, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MABMIS MABMIS] extension)</small> |
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MABMIS IGR3D MABMIS Training] <small>(cli, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MABMIS MABMIS] extension)</small> |
== Dirk Padfield == | == Dirk Padfield == | ||
| − | * | + | * Label Map Smoothing <small>(cli, built-in)</small> |
== Dominik Meier == | == Dominik Meier == | ||
| − | * | + | * Fiducial Registration <small>(cli, built-in)</small> |
== Ethan Ulrich == | == Ethan Ulrich == | ||
| − | * | + | * DICOMPETSUVPlugin |
| − | * [ | + | * DICOMRWVMPlugin |
| − | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM SUVFactor Calculator] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small> | |
== ez == | == ez == | ||
| − | * | + | * DWIJoint Rician LMMSEFilter <small>(cli, built-in)</small> |
| − | * | + | * DWIRician LMMSEFilter <small>(cli, built-in)</small> |
| − | * | + | * DWIUnbiased Non Local Means Filter <small>(cli, built-in)</small> |
== Fotis Drakopoulos == | == Fotis Drakopoulos == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion Body Centric Cubic Mesh] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion CBC 3D I2MConversion] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion Mesh Compression] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion CBC 3D I2MConversion] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PBNRR PBNRR] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PBNRR PBNRR] extension)</small> |
== Francois Budin == | == Francois Budin == | ||
| − | * [ | + | * [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] <small>(cli, bundled in [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] extension)</small> |
| − | * | + | * Resample DTIVolume <small>(cli, built-in)</small> |
| − | * | + | * Resample Scalar Vector DWIVolume <small>(cli, built-in)</small> |
== Franklin King == | == Franklin King == | ||
| − | * [ | + | * [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis Monitoring] <small>(scripted, bundled in [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis] extension)</small> |
| − | * [ | + | * [https://www.assembla.com/spaces/Scoliosis/wiki Spinal Curvature Measurement] <small>(scripted, bundled in [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis] extension)</small> |
| − | * | + | * Transforms <small>(loadable, built-in)</small> |
== Greg Gardner == | == Greg Gardner == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small> |
== Greg Harris == | == Greg Harris == | ||
| − | * | + | * BRAINSDemon Warp <small>(cli, built-in)</small> |
| − | * | + | * BRAINSResample <small>(cli, built-in)</small> |
* VBRAINSDemon Warp <small>(cli, built-in)</small> | * VBRAINSDemon Warp <small>(cli, built-in)</small> | ||
== Guido Gerig == | == Guido Gerig == | ||
| − | * | + | * Extract Skeleton <small>(cli, built-in)</small> |
== Guillaume Pernelle == | == Guillaume Pernelle == | ||
| − | * [ | + | * [https://github.com/gpernelle/iGyne i Gyne] <small>(scripted, bundled in [https://github.com/gpernelle/iGyne i Gyne] extension)</small> |
| − | * [ | + | * [https://github.com/gpernelle/NeedleFinder Needle Finder] <small>(scripted, bundled in [https://github.com/gpernelle/NeedleFinder Needle Finder] extension)</small> |
== Hans J. Johnson == | == Hans J. Johnson == | ||
| − | * | + | * BRAINSDemon Warp <small>(cli, built-in)</small> |
| − | * | + | * BRAINSFit <small>(cli, built-in)</small> |
* BRAINSROIAuto <small>(cli, built-in)</small> | * BRAINSROIAuto <small>(cli, built-in)</small> | ||
* BRAINSTransform Convert <small>(cli, built-in)</small> | * BRAINSTransform Convert <small>(cli, built-in)</small> | ||
* VBRAINSDemon Warp <small>(cli, built-in)</small> | * VBRAINSDemon Warp <small>(cli, built-in)</small> | ||
== Hans Johnson == | == Hans Johnson == | ||
| − | * | + | * BRAINSResample <small>(cli, built-in)</small> |
* BRAINSResize <small>(cli, built-in)</small> | * BRAINSResize <small>(cli, built-in)</small> | ||
* DWIConvert <small>(cli, built-in)</small> | * DWIConvert <small>(cli, built-in)</small> | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT PETSUVImage Maker] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT Longitudinal PETCT] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM SUVFactor Calculator] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small> |
== hans-johnson -at- uiowa.edu == | == hans-johnson -at- uiowa.edu == | ||
| − | * | + | * BRAINSFit <small>(cli, built-in)</small> |
* BRAINSROIAuto <small>(cli, built-in)</small> | * BRAINSROIAuto <small>(cli, built-in)</small> | ||
== http://www.psychiatry.uiowa.edu == | == http://www.psychiatry.uiowa.edu == | ||
| − | * | + | * BRAINSFit <small>(cli, built-in)</small> |
* BRAINSROIAuto <small>(cli, built-in)</small> | * BRAINSROIAuto <small>(cli, built-in)</small> | ||
== Ivan Kolesov == | == Ivan Kolesov == | ||
| Line 1,252: | Line 1,206: | ||
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] <small>(scripted, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] <small>(scripted, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> | ||
== Jan Egger == | == Jan Egger == | ||
| − | * [ | + | * [https://github.com/gpernelle/iGyne i Gyne] <small>(scripted, bundled in [https://github.com/gpernelle/iGyne i Gyne] extension)</small> |
== Jayender Jagadeesan == | == Jayender Jagadeesan == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/TrackerStabilizer Tracker Stabilizer] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/TrackerStabilizer Tracker Stabilizer] extension)</small> |
== Jean-Baptiste Berger == | == Jean-Baptiste Berger == | ||
| − | * | + | * Data Store <small>(loadable, built-in)</small> |
== Jean-Christophe Fillion-Robin == | == Jean-Christophe Fillion-Robin == | ||
* CLI4Test | * CLI4Test | ||
| − | * | + | * Data Store <small>(loadable, built-in)</small> |
| − | * [ | + | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut] <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> |
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
* fiber visibility crash2438 | * fiber visibility crash2438 | ||
* label Toggle Bug2049 | * label Toggle Bug2049 | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Commander] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Bridge] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Module Generator] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Bridge] extension)</small> |
| − | * | + | * Multi Volume Explorer <small>(loadable, built-in)</small> |
| − | * | + | * Multi Volume Importer <small>(scripted, built-in)</small> |
| − | * | + | * Sample Data <small>(scripted, built-in)</small> |
| − | * | + | * Simple Filters <small>(scripted, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SlicerToKiwiExporter Slicer To Kiwi Exporter] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SlicerToKiwiExporter Slicer To Kiwi Exporter] extension)</small> |
| − | * | + | * Transforms <small>(loadable, built-in)</small> |
| − | * | + | * View Controllers <small>(loadable, built-in)</small> |
| − | * | + | * Welcome <small>(loadable, built-in)</small> |
== Jim Miller == | == Jim Miller == | ||
* Charting <small>(scripted, built-in)</small> | * Charting <small>(scripted, built-in)</small> | ||
| − | * [ | + | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] <small>(cli, bundled in [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] extension)</small> |
| − | * | + | * Simple Region Growing Segmentation <small>(cli, built-in)</small> |
* Slice Link Logic <small>(scripted, built-in)</small> | * Slice Link Logic <small>(scripted, built-in)</small> | ||
* Slicer4Minute <small>(scripted, built-in)</small> | * Slicer4Minute <small>(scripted, built-in)</small> | ||
| − | * | + | * View Controllers <small>(loadable, built-in)</small> |
* View Controllers Slice Interpolation Bug1926 | * View Controllers Slice Interpolation Bug1926 | ||
== Johan Andruejol == | == Johan Andruejol == | ||
| − | * | + | * Units <small>(loadable, built-in)</small> |
== John Evans == | == John Evans == | ||
| − | * [ | + | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] <small>(cli, bundled in [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] extension)</small> |
== Jonathan Bronson == | == Jonathan Bronson == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CleaverExtension Cleaver CLI] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CleaverExtension Cleaver Extension] extension)</small> |
== Josh Cates == | == Josh Cates == | ||
| − | * | + | * Label Map Smoothing <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small> |
== Joy Matsui == | == Joy Matsui == | ||
* DWIConvert <small>(cli, built-in)</small> | * DWIConvert <small>(cli, built-in)</small> | ||
== Julien Finet == | == Julien Finet == | ||
| − | * | + | * Cameras <small>(loadable, built-in)</small> |
| − | * | + | * Colors <small>(loadable, built-in)</small> |
| − | * | + | * Data <small>(loadable, built-in)</small> |
* Double Arrays <small>(loadable, built-in)</small> | * Double Arrays <small>(loadable, built-in)</small> | ||
| − | * | + | * Event Broker |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ImageMaker Image Maker] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ImageMaker Image Maker] extension)</small> |
| − | * | + | * Models <small>(loadable, built-in)</small> |
| − | * | + | * Multi Volume Explorer <small>(loadable, built-in)</small> |
| − | * | + | * Multi Volume Importer <small>(scripted, built-in)</small> |
* Scene Performance <small>(scripted, built-in)</small> | * Scene Performance <small>(scripted, built-in)</small> | ||
| − | * | + | * Threshold Scalar Volume <small>(cli, built-in)</small> |
| − | * | + | * Tractography Display <small>(loadable, built-in)</small> |
| − | * | + | * Transforms <small>(loadable, built-in)</small> |
| − | * | + | * Units <small>(loadable, built-in)</small> |
| − | * | + | * Volume Rendering <small>(loadable, built-in)</small> |
| − | * | + | * Volumes <small>(loadable, built-in)</small> |
== Julien Jomier == | == Julien Jomier == | ||
| − | * | + | * Gaussian Blur Image Filter <small>(cli, built-in)</small> |
== Junichi Tokuda == | == Junichi Tokuda == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CornerAnnotation Corner Annotation] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CornerAnnotation Corner Annotation] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CurveMaker Curve Maker] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CurveMaker Curve Maker] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ErodeDilateLabel Dilate Label] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ErodeDilateLabel Erode Dilate Label] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ErodeDilateLabel Erode Label] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ErodeDilateLabel Erode Dilate Label] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/PercutaneousApproachAnalysis Percutaneous Approach Analysis] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/PercutaneousApproachAnalysis Percutaneous Approach Analysis] extension)</small> |
== Kent Williams == | == Kent Williams == | ||
* BRAINSDWICleanup <small>(cli, built-in)</small> | * BRAINSDWICleanup <small>(cli, built-in)</small> | ||
| Line 1,324: | Line 1,278: | ||
* DWIConvert <small>(cli, built-in)</small> | * DWIConvert <small>(cli, built-in)</small> | ||
== Kevin Wang == | == Kevin Wang == | ||
| − | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Commander] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Bridge] extension)</small> | |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Module Generator] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Bridge] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Sequence Browser] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Multidim Data] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Sequences] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Multidim Data] extension)</small> |
| − | * [ | ||
== Kilian Pohl == | == Kilian Pohl == | ||
| − | * | + | * Annotations <small>(loadable, built-in)</small> |
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ChangeTracker Change Tracker] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ChangeTracker Change Tracker] extension)</small> |
* EMSegment <small>(loadable, built-in)</small> | * EMSegment <small>(loadable, built-in)</small> | ||
* EMSegment Command Line <small>(cli, built-in)</small> | * EMSegment Command Line <small>(cli, built-in)</small> | ||
| − | * | + | * Scene Views <small>(loadable, built-in)</small> |
== Koichiro Murakami == | == Koichiro Murakami == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CornerAnnotation Corner Annotation] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CornerAnnotation Corner Annotation] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/PercutaneousApproachAnalysis Percutaneous Approach Analysis] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/PercutaneousApproachAnalysis Percutaneous Approach Analysis] extension)</small> |
== Lauren Barber == | == Lauren Barber == | ||
| − | * [ | + | * [https://github.com/gpernelle/iGyne i Gyne] <small>(scripted, bundled in [https://github.com/gpernelle/iGyne i Gyne] extension)</small> |
| − | * [ | + | * [https://github.com/gpernelle/NeedleFinder Needle Finder] <small>(scripted, bundled in [https://github.com/gpernelle/NeedleFinder Needle Finder] extension)</small> |
== Lauren O'Donnell == | == Lauren O'Donnell == | ||
* Fiber Bundle Label Select <small>(cli, built-in)</small> | * Fiber Bundle Label Select <small>(cli, built-in)</small> | ||
| − | * | + | * Probe Volume With Model <small>(cli, built-in)</small> |
== Laurent Chauvin == | == Laurent Chauvin == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CurveMaker Curve Maker] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CurveMaker Curve Maker] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DiceComputation Dice Computation] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DiceComputation Dice Computation] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/PercutaneousApproachAnalysis Percutaneous Approach Analysis] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/PercutaneousApproachAnalysis Percutaneous Approach Analysis] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/TrackerStabilizer Tracker Stabilizer] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/TrackerStabilizer Tracker Stabilizer] extension)</small> |
== Liang-Jia Zhu == | == Liang-Jia Zhu == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small> |
== Liangjia Zhu == | == Liangjia Zhu == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice Effect] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice Effect] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] <small>(scripted, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] <small>(scripted, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] extension)</small> |
| − | |||
| − | |||
== Luis G. Torres == | == Luis G. Torres == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PortPlacement Port Placement] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PortPlacement Port Placement] extension)</small> |
== Luping Fang == | == Luping Fang == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/GyroGuide Gyro Guide] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/GyroGuide Gyro Guide] extension)</small> |
== Marc Niethammer == | == Marc Niethammer == | ||
| − | * | + | * DWIRician LMMSEFilter <small>(cli, built-in)</small> |
== Marcel Prastawa prastawa@sci.utah.edu == | == Marcel Prastawa prastawa@sci.utah.edu == | ||
* [http://www.nitrc.org/projects/abc ABC] <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small> | * [http://www.nitrc.org/projects/abc ABC] <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small> | ||
| Line 1,368: | Line 1,319: | ||
* DWIConvert <small>(cli, built-in)</small> | * DWIConvert <small>(cli, built-in)</small> | ||
== Markus Van Tol == | == Markus Van Tol == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT Longitudinal PETCT] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT Longitudinal PETCT] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT PETSUVImage Maker] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT Longitudinal PETCT] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM SUVFactor Calculator] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small> |
== Martin Styner == | == Martin Styner == | ||
| − | * | + | * Extract Skeleton <small>(cli, built-in)</small> |
== Mason Winsauer == | == Mason Winsauer == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Apply Matrix] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Downsize] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Growing] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Label Addition] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Label Extraction] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Mask Creation] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Non Growing] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | |||
| − | |||
== Matthew Holden == | == Matthew Holden == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Metafile Importer] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Multidim Data] extension)</small> |
| − | * [ | + | * [http://www.perktutor.org/ Python Metrics Calculator] <small>(scripted, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Sequence Browser] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Multidim Data] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Sequences] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Multidim Data] extension)</small> |
== Matthew S. Holden == | == Matthew S. Holden == | ||
| − | * [ | + | * [http://www.perktutor.org/ Perk Evaluator] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> |
| − | * [ | + | * [http://www.perktutor.org/ Transform Recorder] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> |
| − | * [ | + | * [http://www.perktutor.org/ Workflow Segmentation] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> |
== Matthew Woehlke == | == Matthew Woehlke == | ||
| − | * | + | * Extension Wizard <small>(scripted, built-in)</small> |
== Michael Jeulin-Lagarrigue == | == Michael Jeulin-Lagarrigue == | ||
| − | * | + | * Reformat <small>(loadable, built-in)</small> |
== Minjeong Kim == | == Minjeong Kim == | ||
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MABMIS IGR3D MABMIS Testing] <small>(cli, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MABMIS MABMIS] extension)</small> |
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MABMIS IGR3D MABMIS Training] <small>(cli, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MABMIS MABMIS] extension)</small> |
== Nabgha Fahrat == | == Nabgha Fahrat == | ||
| − | * [ | + | * [https://github.com/gpernelle/iGyne i Gyne] <small>(scripted, bundled in [https://github.com/gpernelle/iGyne i Gyne] extension)</small> |
| − | * [ | + | * [https://github.com/gpernelle/NeedleFinder Needle Finder] <small>(scripted, bundled in [https://github.com/gpernelle/NeedleFinder Needle Finder] extension)</small> |
== Neuro Image Resarch == | == Neuro Image Resarch == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Apply Matrix] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Downsize] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Growing] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Label Addition] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Label Extraction] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Mask Creation] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Non Growing] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
== Nicholas Herlambang == | == Nicholas Herlambang == | ||
* JRC2013Vis | * JRC2013Vis | ||
== Nick Tustison == | == Nick Tustison == | ||
| − | * | + | * N4ITKBias Field Correction <small>(cli, built-in)</small> |
== Nicole Aucoin == | == Nicole Aucoin == | ||
| − | * | + | * ACPCTransform <small>(cli, built-in)</small> |
* Add Many Markups Fiducial Test | * Add Many Markups Fiducial Test | ||
| − | * | + | * Annotations <small>(loadable, built-in)</small> |
| − | * | + | * Cast Scalar Volume <small>(cli, built-in)</small> |
| − | * | + | * Colors <small>(loadable, built-in)</small> |
| − | * | + | * Data <small>(loadable, built-in)</small> |
| − | |||
* Fiducial Layout Switch Bug1914 | * Fiducial Layout Switch Bug1914 | ||
| − | * | + | * Grayscale Model Maker <small>(cli, built-in)</small> |
| − | * | + | * Markups <small>(loadable, built-in)</small> |
* Markups In Compare Viewers Self Test | * Markups In Compare Viewers Self Test | ||
* Markups In Views Self Test | * Markups In Views Self Test | ||
| − | * | + | * Mask Scalar Volume <small>(cli, built-in)</small> |
| − | * | + | * Merge Models <small>(cli, built-in)</small> |
| − | * | + | * Model Maker <small>(cli, built-in)</small> |
| − | * | + | * Models <small>(loadable, built-in)</small> |
| − | * | + | * Model To Label Map <small>(cli, built-in)</small> |
* Neurosurgical Planning Tutorial Markups Self Test | * Neurosurgical Planning Tutorial Markups Self Test | ||
| − | * | + | * PETStandard Uptake Value Computation <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT PETSUVImage Maker] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT Longitudinal PETCT] extension)</small> |
| − | + | * Scene Views <small>(loadable, built-in)</small> | |
| − | * | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM SUVFactor Calculator] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small> |
| − | * [ | + | * Threshold Scalar Volume <small>(cli, built-in)</small> |
| − | * | ||
* Volume Rendering Scene Close <small>(scripted, built-in)</small> | * Volume Rendering Scene Close <small>(scripted, built-in)</small> | ||
| − | * | + | * Volumes <small>(loadable, built-in)</small> |
== Nigel Goh == | == Nigel Goh == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ThingiverseBrowser Thingiverse Browser] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ThingiverseBrowser Thingiverse Browser] extension)</small> |
== Nikos Chrisochoides == | == Nikos Chrisochoides == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion Body Centric Cubic Mesh] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion CBC 3D I2MConversion] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion Mesh Compression] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion CBC 3D I2MConversion] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PBNRR PBNRR] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PBNRR PBNRR] extension)</small> |
== Olivier Clatz == | == Olivier Clatz == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PBNRR PBNRR] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PBNRR PBNRR] extension)</small> |
== Pat Marion == | == Pat Marion == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SlicerToKiwiExporter Slicer To Kiwi Exporter] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SlicerToKiwiExporter Slicer To Kiwi Exporter] extension)</small> |
== Patricio Vela == | == Patricio Vela == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice Effect] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice Effect] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
== Paul Mercea == | == Paul Mercea == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT Longitudinal PETCT] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT Longitudinal PETCT] extension)</small> |
== Pengdong Xiao == | == Pengdong Xiao == | ||
| − | * [ | + | * [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] <small>(cli, bundled in [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] extension)</small> |
== Peter Black == | == Peter Black == | ||
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ChangeTracker Change Tracker] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ChangeTracker Change Tracker] extension)</small> |
== Peter Karasev == | == Peter Karasev == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice Effect] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice Effect] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
== Peter Savadjiev == | == Peter Savadjiev == | ||
| − | * [ | + | * [http://www.nitrc.org/projects/finslertract/ Finsler Backtracing] <small>(cli, bundled in [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] extension)</small> |
| − | * [ | + | * [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] <small>(cli, bundled in [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] extension)</small> |
== Pierre Seroul == | == Pierre Seroul == | ||
| − | * | + | * Extract Skeleton <small>(cli, built-in)</small> |
== Pietro Nardelli == | == Pietro Nardelli == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation CLI] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation] extension)</small> |
== Polina Goll == | == Polina Goll == | ||
* EMSegment Command Line <small>(cli, built-in)</small> | * EMSegment Command Line <small>(cli, built-in)</small> | ||
== Qing Pan == | == Qing Pan == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/GyroGuide Gyro Guide] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/GyroGuide Gyro Guide] extension)</small> |
== Raul San Jose == | == Raul San Jose == | ||
| − | * | + | * Diffusion Tensor Scalar Measurements <small>(cli, built-in)</small> |
| − | * | + | * DWITo DTIEstimation <small>(cli, built-in)</small> |
| − | * | + | * Tractography Label Map Seeding <small>(cli, built-in)</small> |
== Rob MacLeod == | == Rob MacLeod == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small> |
== Ron Kikinis == | == Ron Kikinis == | ||
| − | * | + | * ACPCTransform <small>(cli, built-in)</small> |
| − | * | + | * Cast Scalar Volume <small>(cli, built-in)</small> |
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ChangeTracker Change Tracker] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ChangeTracker Change Tracker] extension)</small> |
| − | * | + | * Crop Volume <small>(loadable, built-in)</small> |
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] <small>(scripted, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] <small>(scripted, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> | ||
| − | * | + | * Mask Scalar Volume <small>(cli, built-in)</small> |
| − | * | + | * Merge Models <small>(cli, built-in)</small> |
| − | * | + | * Model Maker <small>(cli, built-in)</small> |
| − | * | + | * Multi Volume Explorer <small>(loadable, built-in)</small> |
| − | * | + | * Multi Volume Importer <small>(scripted, built-in)</small> |
| − | * | + | * N4ITKBias Field Correction <small>(cli, built-in)</small> |
| − | * | + | * PETStandard Uptake Value Computation <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT PETSUVImage Maker] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT Longitudinal PETCT] extension)</small> |
| − | * | + | * Robust Statistics Segmenter <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM SUVFactor Calculator] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small> |
| − | + | * Threshold Scalar Volume <small>(cli, built-in)</small> | |
| − | * | + | * View Controllers <small>(loadable, built-in)</small> |
| − | * | + | * Volume Rendering <small>(loadable, built-in)</small> |
| − | * | ||
== Ross Whitaker == | == Ross Whitaker == | ||
| − | * | + | * Label Map Smoothing <small>(cli, built-in)</small> |
== Ruifeng Chen == | == Ruifeng Chen == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/GyroGuide Gyro Guide] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/GyroGuide Gyro Guide] extension)</small> |
== S == | == S == | ||
| − | * [ | + | * [https://github.com/gpernelle/iGyne i Gyne] <small>(scripted, bundled in [https://github.com/gpernelle/iGyne i Gyne] extension)</small> |
| − | * [ | + | * [https://github.com/gpernelle/NeedleFinder Needle Finder] <small>(scripted, bundled in [https://github.com/gpernelle/NeedleFinder Needle Finder] extension)</small> |
== Sam Song == | == Sam Song == | ||
| − | * [ | + | * [https://github.com/gpernelle/iGyne i Gyne] <small>(scripted, bundled in [https://github.com/gpernelle/iGyne i Gyne] extension)</small> |
== Santiago Aja Fern == | == Santiago Aja Fern == | ||
| − | * | + | * DWIJoint Rician LMMSEFilter <small>(cli, built-in)</small> |
| − | * | + | * DWIRician LMMSEFilter <small>(cli, built-in)</small> |
| − | * | + | * DWIUnbiased Non Local Means Filter <small>(cli, built-in)</small> |
== Sebastien Barré == | == Sebastien Barré == | ||
| − | * | + | * Cameras <small>(loadable, built-in)</small> |
== Sebastien Barre == | == Sebastien Barre == | ||
* EMSegment Command Line <small>(cli, built-in)</small> | * EMSegment Command Line <small>(cli, built-in)</small> | ||
== Shigeyuki Naka == | == Shigeyuki Naka == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CornerAnnotation Corner Annotation] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CornerAnnotation Corner Annotation] extension)</small> |
== Soichiro Tani == | == Soichiro Tani == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CornerAnnotation Corner Annotation] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CornerAnnotation Corner Annotation] extension)</small> |
== Sonia Pujol == | == Sonia Pujol == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DiceComputation Dice Computation] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DiceComputation Dice Computation] extension)</small> |
* DTIexport <small>(cli, built-in)</small> | * DTIexport <small>(cli, built-in)</small> | ||
* DTIimport <small>(cli, built-in)</small> | * DTIimport <small>(cli, built-in)</small> | ||
== Stephen Aylward == | == Stephen Aylward == | ||
| − | * | + | * Extract Skeleton <small>(cli, built-in)</small> |
| − | * | + | * Gaussian Blur Image Filter <small>(cli, built-in)</small> |
== Stephen R Aylward == | == Stephen R Aylward == | ||
| − | * | + | * Expert Automated Registration <small>(cli, built-in)</small> |
== Steve Pieper == | == Steve Pieper == | ||
* Atlas Tests | * Atlas Tests | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM Binary Watershed Effect] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEM] extension)</small> |
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice Effect] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice Effect] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Compare Volumes] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * | + | * Data Probe <small>(scripted, built-in)</small> |
| − | |||
* DICOMDiffusion Volume Plugin | * DICOMDiffusion Volume Plugin | ||
* DICOMLongitudinal PETCTPlugin | * DICOMLongitudinal PETCTPlugin | ||
* DICOMScalar Volume Plugin | * DICOMScalar Volume Plugin | ||
* DICOMSlicer Data Bundle Plugin | * DICOMSlicer Data Bundle Plugin | ||
| − | * | + | * Editor <small>(scripted, built-in)</small> |
| − | * | + | * Endoscopy <small>(scripted, built-in)</small> |
* fiber visibility crash2438 | * fiber visibility crash2438 | ||
| − | * | + | * Fiber Bundle To Label Map <small>(scripted, built-in)</small> |
| − | * | + | * Label Statistics <small>(scripted, built-in)</small> |
* label Toggle Bug2049 | * label Toggle Bug2049 | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Landmark Registration] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * | + | * Multi Volume Explorer <small>(loadable, built-in)</small> |
| − | * | + | * Multi Volume Importer <small>(scripted, built-in)</small> |
* Performance Tests | * Performance Tests | ||
| − | |||
* RSNA2012Prostate Demo | * RSNA2012Prostate Demo | ||
* RSNAQuant Tutorial | * RSNAQuant Tutorial | ||
* RSNAVis Tutorial | * RSNAVis Tutorial | ||
| − | * | + | * Sample Data <small>(scripted, built-in)</small> |
* scene Import2428 | * scene Import2428 | ||
* Self Tests | * Self Tests | ||
| − | * | + | * Simple Filters <small>(scripted, built-in)</small> |
* slicer Close Crash Bug2590 | * slicer Close Crash Bug2590 | ||
* Slicer MRBTest | * Slicer MRBTest | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SlicerToKiwiExporter Slicer To Kiwi Exporter] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SlicerToKiwiExporter Slicer To Kiwi Exporter] extension)</small> |
* Threshold Threading Test | * Threshold Threading Test | ||
| − | * | + | * View Controllers <small>(loadable, built-in)</small> |
| − | * | + | * Volumes <small>(loadable, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/XNATSlicer Xnat Slicer] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/XNATSlicer XNATSlicer] extension)</small> |
| − | |||
== Sunil Kumar == | == Sunil Kumar == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/XNATSlicer Xnat Slicer] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/XNATSlicer XNATSlicer] extension)</small> |
== Sylvain Bouix == | == Sylvain Bouix == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small> |
== Tamas Ungi == | == Tamas Ungi == | ||
| − | * [ | + | * [http://www.perktutor.org/ Perk Evaluator] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> |
| − | * [ | + | * [http://www.perktutor.org/ Python Metrics Calculator] <small>(scripted, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> |
| − | * [ | + | * [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis Monitoring] <small>(scripted, bundled in [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis] extension)</small> |
| − | * [ | + | * [https://www.assembla.com/spaces/Scoliosis/wiki Spinal Curvature Measurement] <small>(scripted, bundled in [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis] extension)</small> |
| − | * [ | + | * [http://www.perktutor.org/ Transform Recorder] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> |
| − | * [ | + | * [http://www.perktutor.org/ Workflow Segmentation] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> |
== the University of North Carolina at Chapel Hill == | == the University of North Carolina at Chapel Hill == | ||
| − | * [ | + | * [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] <small>(cli, bundled in [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] extension)</small> |
== Tina Kapur == | == Tina Kapur == | ||
| − | * [ | + | * [https://github.com/gpernelle/iGyne i Gyne] <small>(scripted, bundled in [https://github.com/gpernelle/iGyne i Gyne] extension)</small> |
| − | * [ | + | * [https://github.com/gpernelle/NeedleFinder Needle Finder] <small>(scripted, bundled in [https://github.com/gpernelle/NeedleFinder Needle Finder] extension)</small> |
== Tobias Penzkofer == | == Tobias Penzkofer == | ||
| − | * [ | + | * [https://github.com/gpernelle/iGyne i Gyne] <small>(scripted, bundled in [https://github.com/gpernelle/iGyne i Gyne] extension)</small> |
== Tohru Tani == | == Tohru Tani == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CornerAnnotation Corner Annotation] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CornerAnnotation Corner Annotation] extension)</small> |
== UNC Medical School == | == UNC Medical School == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Apply Matrix] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [[Documentation/ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Downsize] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [[Documentation/ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Growing] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Label Addition] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Label Extraction] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Mask Creation] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Non Growing] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| + | == UofM School of Dentistry == | ||
| + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Apply Matrix] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> | ||
| + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Downsize] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> | ||
| + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Label Addition] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> | ||
| + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Label Extraction] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> | ||
| + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Mask Creation] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> | ||
| + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Non Growing] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> | ||
== UofM School Of Dentistry == | == UofM School Of Dentistry == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Growing] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
== Vince Magnotta == | == Vince Magnotta == | ||
* DWIConvert <small>(cli, built-in)</small> | * DWIConvert <small>(cli, built-in)</small> | ||
| Line 1,609: | Line 1,552: | ||
* BRAINSLabel Stats <small>(cli, built-in)</small> | * BRAINSLabel Stats <small>(cli, built-in)</small> | ||
== Vincent Magnotta == | == Vincent Magnotta == | ||
| − | * | + | * BRAINSResample <small>(cli, built-in)</small> |
== Vinicius Boen == | == Vinicius Boen == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Apply Matrix] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Downsize] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Growing] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Label Addition] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Label Extraction] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Mask Creation] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Non Growing] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Surface Registration] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
== Wendy Plesniak == | == Wendy Plesniak == | ||
| − | * | + | * Annotations <small>(loadable, built-in)</small> |
| − | * | + | * PETStandard Uptake Value Computation <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT PETSUVImage Maker] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT Longitudinal PETCT] extension)</small> |
| − | * | + | * Scene Views <small>(loadable, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM SUVFactor Calculator] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small> |
| − | * | + | * View Controllers <small>(loadable, built-in)</small> |
| − | * | + | * Welcome <small>(loadable, built-in)</small> |
== Xiaodong Tao == | == Xiaodong Tao == | ||
* DWIConvert <small>(cli, built-in)</small> | * DWIConvert <small>(cli, built-in)</small> | ||
| − | * | + | * Model To Label Map <small>(cli, built-in)</small> |
== Xiaofeng Liu == | == Xiaofeng Liu == | ||
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MABMIS IGR3D MABMIS Testing] <small>(cli, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MABMIS MABMIS] extension)</small> |
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MABMIS IGR3D MABMIS Training] <small>(cli, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MABMIS MABMIS] extension)</small> |
== Xiaojun Chen == | == Xiaojun Chen == | ||
| − | * [ | + | * [https://github.com/gpernelle/iGyne i Gyne] <small>(scripted, bundled in [https://github.com/gpernelle/iGyne i Gyne] extension)</small> |
== y Wells == | == y Wells == | ||
| − | * [ | + | * [https://github.com/gpernelle/iGyne i Gyne] <small>(scripted, bundled in [https://github.com/gpernelle/iGyne i Gyne] extension)</small> |
| − | * [ | + | * [https://github.com/gpernelle/NeedleFinder Needle Finder] <small>(scripted, bundled in [https://github.com/gpernelle/NeedleFinder Needle Finder] extension)</small> |
== Yanling Liu == | == Yanling Liu == | ||
| − | * | + | * Volume Rendering <small>(loadable, built-in)</small> |
== Yi Gao == | == Yi Gao == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice Effect] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice Effect] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] <small>(scripted, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] <small>(scripted, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> | ||
| − | * [ | + | * [https://github.com/gpernelle/iGyne i Gyne] <small>(scripted, bundled in [https://github.com/gpernelle/iGyne i Gyne] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] extension)</small> |
| − | * [ | + | * [https://github.com/gpernelle/NeedleFinder Needle Finder] <small>(scripted, bundled in [https://github.com/gpernelle/NeedleFinder Needle Finder] extension)</small> |
| − | * | + | * Robust Statistics Segmenter <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small> |
== Yinglin Lee == | == Yinglin Lee == | ||
* Test Grid Transform Registration <small>(cli, built-in)</small> | * Test Grid Transform Registration <small>(cli, built-in)</small> | ||
== Yingxuan Zhu == | == Yingxuan Zhu == | ||
| − | * [ | + | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] <small>(cli, bundled in [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] extension)</small> |
== Yixun Liu == | == Yixun Liu == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion Body Centric Cubic Mesh] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion CBC 3D I2MConversion] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion Mesh Compression] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion CBC 3D I2MConversion] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PBNRR PBNRR] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PBNRR PBNRR] extension)</small> |
== Yong Zhang == | == Yong Zhang == | ||
| − | * | + | * Annotations <small>(loadable, built-in)</small> |
== Yumin Yuan == | == Yumin Yuan == | ||
* EMSegment Command Line <small>(cli, built-in)</small> | * EMSegment Command Line <small>(cli, built-in)</small> | ||
| Line 1,667: | Line 1,610: | ||
== cli == | == cli == | ||
* [http://www.nitrc.org/projects/abc ABC] <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small> | * [http://www.nitrc.org/projects/abc ABC] <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small> | ||
| − | * | + | * ACPCTransform <small>(cli, built-in)</small> |
| − | * | + | * Add Scalar Volumes <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation CLI] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Apply Matrix] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM Bin Shrink] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEM] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion Body Centric Cubic Mesh] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion CBC 3D I2MConversion] extension)</small> |
| − | * | + | * BRAINSDemon Warp <small>(cli, built-in)</small> |
* BRAINSDWICleanup <small>(cli, built-in)</small> | * BRAINSDWICleanup <small>(cli, built-in)</small> | ||
| − | * | + | * BRAINSFit <small>(cli, built-in)</small> |
* BRAINSLabel Stats <small>(cli, built-in)</small> | * BRAINSLabel Stats <small>(cli, built-in)</small> | ||
| − | * | + | * BRAINSResample <small>(cli, built-in)</small> |
* BRAINSResize <small>(cli, built-in)</small> | * BRAINSResize <small>(cli, built-in)</small> | ||
* BRAINSROIAuto <small>(cli, built-in)</small> | * BRAINSROIAuto <small>(cli, built-in)</small> | ||
* BRAINSTransform Convert <small>(cli, built-in)</small> | * BRAINSTransform Convert <small>(cli, built-in)</small> | ||
| − | * | + | * BSpline To Deformation Field <small>(cli, built-in)</small> |
| − | * | + | * Cast Scalar Volume <small>(cli, built-in)</small> |
| − | * | + | * Checker Board Filter <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CleaverExtension Cleaver CLI] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CleaverExtension Cleaver Extension] extension)</small> |
* CLIROITest <small>(cli, built-in)</small> | * CLIROITest <small>(cli, built-in)</small> | ||
| − | * | + | * Create DICOMSeries <small>(cli, built-in)</small> |
| − | * | + | * Curvature Anisotropic Diffusion <small>(cli, built-in)</small> |
| − | * | + | * Diffusion Tensor Scalar Measurements <small>(cli, built-in)</small> |
* Diffusion Tensor Test <small>(cli, built-in)</small> | * Diffusion Tensor Test <small>(cli, built-in)</small> | ||
| − | * | + | * Diffusion Weighted Volume Masking <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ErodeDilateLabel Dilate Label] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ErodeDilateLabel Erode Dilate Label] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Downsize] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
* DTIexport <small>(cli, built-in)</small> | * DTIexport <small>(cli, built-in)</small> | ||
* DTIimport <small>(cli, built-in)</small> | * DTIimport <small>(cli, built-in)</small> | ||
* DWIConvert <small>(cli, built-in)</small> | * DWIConvert <small>(cli, built-in)</small> | ||
| − | * | + | * DWIJoint Rician LMMSEFilter <small>(cli, built-in)</small> |
| − | * | + | * DWIRician LMMSEFilter <small>(cli, built-in)</small> |
| − | * | + | * DWITo DTIEstimation <small>(cli, built-in)</small> |
| − | * | + | * DWIUnbiased Non Local Means Filter <small>(cli, built-in)</small> |
* EMSegment Command Line <small>(cli, built-in)</small> | * EMSegment Command Line <small>(cli, built-in)</small> | ||
* EMSegment Transform To New Format <small>(cli, built-in)</small> | * EMSegment Transform To New Format <small>(cli, built-in)</small> | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ErodeDilateLabel Erode Label] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ErodeDilateLabel Erode Dilate Label] extension)</small> |
| − | * | + | * Execution Model Tour <small>(cli, built-in)</small> |
| − | * | + | * Expert Automated Registration <small>(cli, built-in)</small> |
| − | * | + | * Extract Skeleton <small>(cli, built-in)</small> |
* Fiber Bundle Label Select <small>(cli, built-in)</small> | * Fiber Bundle Label Select <small>(cli, built-in)</small> | ||
| − | * | + | * Fiber Tract Measurements <small>(cli, built-in)</small> |
| − | * [ | + | * Fiducial Registration <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.nitrc.org/projects/finslertract/ Finsler Backtracing] <small>(cli, bundled in [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] extension)</small> |
| − | * | + | * [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] <small>(cli, bundled in [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] extension)</small> |
| − | * | + | * Gaussian Blur Image Filter <small>(cli, built-in)</small> |
| − | * | + | * Gradient Anisotropic Diffusion <small>(cli, built-in)</small> |
| − | * | + | * Grayscale Fill Hole Image Filter <small>(cli, built-in)</small> |
| − | * | + | * Grayscale Grind Peak Image Filter <small>(cli, built-in)</small> |
| − | * [ | + | * Grayscale Model Maker <small>(cli, built-in)</small> |
| − | * | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Growing] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * Histogram Matching <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEMImport] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEM] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEMImport Series] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEM] extension)</small> |
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MABMIS IGR3D MABMIS Testing] <small>(cli, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MABMIS MABMIS] extension)</small> |
| − | * | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MABMIS IGR3D MABMIS Training] <small>(cli, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MABMIS MABMIS] extension)</small> |
| − | * [ | + | * Image Label Combine <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ImageMaker Image Maker] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ImageMaker Image Maker] extension)</small> |
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ChangeTracker Intensity Difference Metric] <small>(cli, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ChangeTracker Change Tracker] extension)</small> |
| − | * [ | + | * [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] <small>(cli, bundled in [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Label Addition] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Label Extraction] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * Label Map Smoothing <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] extension)</small> |
| − | * | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Mask Creation] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * Mask Scalar Volume <small>(cli, built-in)</small> |
| − | * | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Commander] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Bridge] extension)</small> |
| − | * | + | * Median Image Filter <small>(cli, built-in)</small> |
| − | * [ | + | * Merge Models <small>(cli, built-in)</small> |
| − | * | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion Mesh Compression] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion CBC 3D I2MConversion] extension)</small> |
| − | * | + | * Model Maker <small>(cli, built-in)</small> |
| − | * | + | * Model To Label Map <small>(cli, built-in)</small> |
| − | * | + | * Multiply Scalar Volumes <small>(cli, built-in)</small> |
| − | * [ | + | * N4ITKBias Field Correction <small>(cli, built-in)</small> |
| − | * | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Non Growing] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * | + | * Orient Scalar Volume <small>(cli, built-in)</small> |
| − | * [ | + | * Otsu Threshold Image Filter <small>(cli, built-in)</small> |
| + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PBNRR PBNRR] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PBNRR PBNRR] extension)</small> | ||
* Perform Metric Test <small>(cli, built-in)</small> | * Perform Metric Test <small>(cli, built-in)</small> | ||
| − | * | + | * PETStandard Uptake Value Computation <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT PETSUVImage Maker] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT Longitudinal PETCT] extension)</small> |
| − | * [ | + | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] <small>(cli, bundled in [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] extension)</small> |
| − | * | + | * Probe Volume With Model <small>(cli, built-in)</small> |
| − | * | + | * Resample DTIVolume <small>(cli, built-in)</small> |
| − | * | + | * Resample Scalar Vector DWIVolume <small>(cli, built-in)</small> |
| − | * | + | * Resample Scalar Volume <small>(cli, built-in)</small> |
| − | * | + | * Robust Statistics Segmenter <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small> |
| − | * | + | * Simple Region Growing Segmentation <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SobolevSegmenter Sobolev Segmenter] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SobolevSegmenter Sobolev Segmenter] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM Spacing Aware Curvature Diffusion] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEM] extension)</small> |
| − | * | + | * Subtract Scalar Volumes <small>(cli, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM SUVFactor Calculator] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SwissSkullStripper Swiss Skull Stripper] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SwissSkullStripper Swiss Skull Stripper] extension)</small> |
* Test Grid Transform Registration <small>(cli, built-in)</small> | * Test Grid Transform Registration <small>(cli, built-in)</small> | ||
| − | * | + | * Threshold Scalar Volume <small>(cli, built-in)</small> |
| − | * | + | * Tractography Label Map Seeding <small>(cli, built-in)</small> |
* VBRAINSDemon Warp <small>(cli, built-in)</small> | * VBRAINSDemon Warp <small>(cli, built-in)</small> | ||
| − | * | + | * Voting Binary Hole Filling Image Filter <small>(cli, built-in)</small> |
== loadable == | == loadable == | ||
| − | * | + | * Annotations <small>(loadable, built-in)</small> |
| − | * | + | * Cameras <small>(loadable, built-in)</small> |
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
| − | * | + | * Colors <small>(loadable, built-in)</small> |
| − | * | + | * Crop Volume <small>(loadable, built-in)</small> |
| − | * | + | * Data <small>(loadable, built-in)</small> |
| − | * | + | * Data Store <small>(loadable, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DiceComputation Dice Computation] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DiceComputation Dice Computation] extension)</small> |
* Double Arrays <small>(loadable, built-in)</small> | * Double Arrays <small>(loadable, built-in)</small> | ||
* EMSegment <small>(loadable, built-in)</small> | * EMSegment <small>(loadable, built-in)</small> | ||
* EMSegment Quick <small>(loadable, built-in)</small> | * EMSegment Quick <small>(loadable, built-in)</small> | ||
| − | * [ | + | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut] <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> |
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT Longitudinal PETCT] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT Longitudinal PETCT] extension)</small> |
| − | * | + | * Markups <small>(loadable, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Module Generator] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Bridge] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Metafile Importer] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Multidim Data] extension)</small> |
| − | * | + | * Models <small>(loadable, built-in)</small> |
| − | * | + | * Multi Volume Explorer <small>(loadable, built-in)</small> |
| − | * | + | * Open IGTLink IF <small>(loadable, built-in)</small> |
| − | * [ | + | * [http://www.perktutor.org/ Perk Evaluator] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> |
| − | * | + | * Reformat <small>(loadable, built-in)</small> |
| − | * | + | * Scene Views <small>(loadable, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Sequence Browser] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Multidim Data] extension)</small> |
| − | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Sequences] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Multidim Data] extension)</small> | |
| − | * [ | + | * Subject Hierarchy <small>(loadable, built-in)</small> |
| − | * | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/TrackerStabilizer Tracker Stabilizer] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/TrackerStabilizer Tracker Stabilizer] extension)</small> |
| − | * [ | + | * Tractography Display <small>(loadable, built-in)</small> |
| − | * | ||
* Tractography Interactive Seeding <small>(loadable, built-in)</small> | * Tractography Interactive Seeding <small>(loadable, built-in)</small> | ||
| − | * [ | + | * [http://www.perktutor.org/ Transform Recorder] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> |
| − | * | + | * Transforms <small>(loadable, built-in)</small> |
| − | * | + | * Units <small>(loadable, built-in)</small> |
| − | * | + | * View Controllers <small>(loadable, built-in)</small> |
| − | * | + | * Volume Rendering <small>(loadable, built-in)</small> |
| − | * | + | * Volumes <small>(loadable, built-in)</small> |
| − | * | + | * Welcome <small>(loadable, built-in)</small> |
| − | * [ | + | * [http://www.perktutor.org/ Workflow Segmentation] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> |
== scripted == | == scripted == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM Binary Watershed Effect] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEM] extension)</small> |
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice Effect] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice Effect] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ChangeTracker Change Tracker] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ChangeTracker Change Tracker] extension)</small> |
* Charting <small>(scripted, built-in)</small> | * Charting <small>(scripted, built-in)</small> | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Compare Volumes] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CornerAnnotation Corner Annotation] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CornerAnnotation Corner Annotation] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CurveMaker Curve Maker] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CurveMaker Curve Maker] extension)</small> |
| − | * | + | * Data Probe <small>(scripted, built-in)</small> |
| − | |||
* DICOM2Full Brain Tractography <small>(scripted, built-in)</small> | * DICOM2Full Brain Tractography <small>(scripted, built-in)</small> | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM Double Threshold Effect] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEM] extension)</small> |
| − | * | + | * Editor <small>(scripted, built-in)</small> |
| − | * | + | * Endoscopy <small>(scripted, built-in)</small> |
| − | * | + | * Extension Wizard <small>(scripted, built-in)</small> |
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] <small>(scripted, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] <small>(scripted, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> | ||
| − | * | + | * Fiber Bundle To Label Map <small>(scripted, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/GyroGuide Gyro Guide] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/GyroGuide Gyro Guide] extension)</small> |
| − | * [ | + | * [https://github.com/gpernelle/iGyne i Gyne] <small>(scripted, bundled in [https://github.com/gpernelle/iGyne i Gyne] extension)</small> |
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter KUtil] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter KUtil] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM Label Object Statistics] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEM] extension)</small> |
| − | * | + | * Label Statistics <small>(scripted, built-in)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Landmark Registration] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | + | * Multi Volume Importer <small>(scripted, built-in)</small> | |
| − | * | + | * [https://github.com/gpernelle/NeedleFinder Needle Finder] <small>(scripted, bundled in [https://github.com/gpernelle/NeedleFinder Needle Finder] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/PercutaneousApproachAnalysis Percutaneous Approach Analysis] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/PercutaneousApproachAnalysis Percutaneous Approach Analysis] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PortPlacement Port Placement] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PortPlacement Port Placement] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PyDevRemoteDebug Py Dev Remote Debug] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PyDevRemoteDebug Py Dev Remote Debug] extension)</small> |
| − | * [ | + | * [http://www.perktutor.org/ Python Metrics Calculator] <small>(scripted, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> |
| − | * [ | + | * Sample Data <small>(scripted, built-in)</small> |
| − | * | ||
* Scene Performance <small>(scripted, built-in)</small> | * Scene Performance <small>(scripted, built-in)</small> | ||
| − | * [ | + | * [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis Monitoring] <small>(scripted, bundled in [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis] extension)</small> |
| − | * | + | * Simple Filters <small>(scripted, built-in)</small> |
* Slice Link Logic <small>(scripted, built-in)</small> | * Slice Link Logic <small>(scripted, built-in)</small> | ||
* Slicer4Minute <small>(scripted, built-in)</small> | * Slicer4Minute <small>(scripted, built-in)</small> | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SlicerToKiwiExporter Slicer To Kiwi Exporter] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SlicerToKiwiExporter Slicer To Kiwi Exporter] extension)</small> |
| − | * [ | + | * [https://www.assembla.com/spaces/Scoliosis/wiki Spinal Curvature Measurement] <small>(scripted, bundled in [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Surface Registration] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] extension)</small> |
| − | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ThingiverseBrowser Thingiverse Browser] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ThingiverseBrowser Thingiverse Browser] extension)</small> | |
| − | * [ | ||
| − | |||
| − | |||
| − | |||
* Volume Rendering Scene Close <small>(scripted, built-in)</small> | * Volume Rendering Scene Close <small>(scripted, built-in)</small> | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/WindowLevelEffect Window Level Effect] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/WindowLevelEffect Window Level Effect] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/XNATSlicer Xnat Slicer] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/XNATSlicer XNATSlicer] extension)</small> |
= Modules by extension = | = Modules by extension = | ||
46 extensions: | 46 extensions: | ||
| Line 1,887: | Line 1,824: | ||
* [[#PortPlacement|Port Placement]] | * [[#PortPlacement|Port Placement]] | ||
* [[#PyDevRemoteDebug|Py Dev Remote Debug]] | * [[#PyDevRemoteDebug|Py Dev Remote Debug]] | ||
| − | |||
* [[#Scoliosis|Scoliosis]] | * [[#Scoliosis|Scoliosis]] | ||
* [[#SegmentationAidedRegistration|Segmentation Aided Registration]] | * [[#SegmentationAidedRegistration|Segmentation Aided Registration]] | ||
| Line 1,896: | Line 1,832: | ||
* [[#ThingiverseBrowser|Thingiverse Browser]] | * [[#ThingiverseBrowser|Thingiverse Browser]] | ||
* [[#TrackerStabilizer|Tracker Stabilizer]] | * [[#TrackerStabilizer|Tracker Stabilizer]] | ||
| − | |||
* [[#WindowLevelEffect|Window Level Effect]] | * [[#WindowLevelEffect|Window Level Effect]] | ||
* [[#XNATSlicer|XNATSlicer]] | * [[#XNATSlicer|XNATSlicer]] | ||
| Line 1,902: | Line 1,837: | ||
* [http://www.nitrc.org/projects/abc ABC] <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small> | * [http://www.nitrc.org/projects/abc ABC] <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small> | ||
== AirwaySegmentation == | == AirwaySegmentation == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation CLI] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation] extension)</small> |
== builtin == | == builtin == | ||
| − | * | + | * ACPCTransform <small>(cli, built-in)</small> |
| − | * | + | * Add Scalar Volumes <small>(cli, built-in)</small> |
| − | * | + | * Annotations <small>(loadable, built-in)</small> |
| − | * | + | * BRAINSDemon Warp <small>(cli, built-in)</small> |
* BRAINSDWICleanup <small>(cli, built-in)</small> | * BRAINSDWICleanup <small>(cli, built-in)</small> | ||
| − | * | + | * BRAINSFit <small>(cli, built-in)</small> |
* BRAINSLabel Stats <small>(cli, built-in)</small> | * BRAINSLabel Stats <small>(cli, built-in)</small> | ||
| − | * | + | * BRAINSResample <small>(cli, built-in)</small> |
* BRAINSResize <small>(cli, built-in)</small> | * BRAINSResize <small>(cli, built-in)</small> | ||
* BRAINSROIAuto <small>(cli, built-in)</small> | * BRAINSROIAuto <small>(cli, built-in)</small> | ||
* BRAINSTransform Convert <small>(cli, built-in)</small> | * BRAINSTransform Convert <small>(cli, built-in)</small> | ||
| − | * | + | * BSpline To Deformation Field <small>(cli, built-in)</small> |
| − | * | + | * Cameras <small>(loadable, built-in)</small> |
| − | * | + | * Cast Scalar Volume <small>(cli, built-in)</small> |
* Charting <small>(scripted, built-in)</small> | * Charting <small>(scripted, built-in)</small> | ||
| − | * | + | * Checker Board Filter <small>(cli, built-in)</small> |
* CLIROITest <small>(cli, built-in)</small> | * CLIROITest <small>(cli, built-in)</small> | ||
| − | * | + | * Colors <small>(loadable, built-in)</small> |
| − | * | + | * Create DICOMSeries <small>(cli, built-in)</small> |
| − | * | + | * Crop Volume <small>(loadable, built-in)</small> |
| − | * | + | * Curvature Anisotropic Diffusion <small>(cli, built-in)</small> |
| − | * | + | * Data <small>(loadable, built-in)</small> |
| − | * | + | * Data Probe <small>(scripted, built-in)</small> |
| − | * | + | * Data Store <small>(loadable, built-in)</small> |
| − | |||
* DICOM2Full Brain Tractography <small>(scripted, built-in)</small> | * DICOM2Full Brain Tractography <small>(scripted, built-in)</small> | ||
| − | * | + | * Diffusion Tensor Scalar Measurements <small>(cli, built-in)</small> |
* Diffusion Tensor Test <small>(cli, built-in)</small> | * Diffusion Tensor Test <small>(cli, built-in)</small> | ||
| − | * | + | * Diffusion Weighted Volume Masking <small>(cli, built-in)</small> |
* Double Arrays <small>(loadable, built-in)</small> | * Double Arrays <small>(loadable, built-in)</small> | ||
* DTIexport <small>(cli, built-in)</small> | * DTIexport <small>(cli, built-in)</small> | ||
* DTIimport <small>(cli, built-in)</small> | * DTIimport <small>(cli, built-in)</small> | ||
* DWIConvert <small>(cli, built-in)</small> | * DWIConvert <small>(cli, built-in)</small> | ||
| − | * | + | * DWIJoint Rician LMMSEFilter <small>(cli, built-in)</small> |
| − | * | + | * DWIRician LMMSEFilter <small>(cli, built-in)</small> |
| − | * | + | * DWITo DTIEstimation <small>(cli, built-in)</small> |
| − | * | + | * DWIUnbiased Non Local Means Filter <small>(cli, built-in)</small> |
| − | * | + | * Editor <small>(scripted, built-in)</small> |
* EMSegment <small>(loadable, built-in)</small> | * EMSegment <small>(loadable, built-in)</small> | ||
* EMSegment Command Line <small>(cli, built-in)</small> | * EMSegment Command Line <small>(cli, built-in)</small> | ||
* EMSegment Quick <small>(loadable, built-in)</small> | * EMSegment Quick <small>(loadable, built-in)</small> | ||
* EMSegment Transform To New Format <small>(cli, built-in)</small> | * EMSegment Transform To New Format <small>(cli, built-in)</small> | ||
| − | * | + | * Endoscopy <small>(scripted, built-in)</small> |
| − | * | + | * Execution Model Tour <small>(cli, built-in)</small> |
| − | * | + | * Expert Automated Registration <small>(cli, built-in)</small> |
| − | * | + | * Extension Wizard <small>(scripted, built-in)</small> |
| − | * | + | * Extract Skeleton <small>(cli, built-in)</small> |
* Fiber Bundle Label Select <small>(cli, built-in)</small> | * Fiber Bundle Label Select <small>(cli, built-in)</small> | ||
| − | * | + | * Fiber Bundle To Label Map <small>(scripted, built-in)</small> |
| − | * | + | * Fiber Tract Measurements <small>(cli, built-in)</small> |
| − | * | + | * Fiducial Registration <small>(cli, built-in)</small> |
| − | * | + | * Gaussian Blur Image Filter <small>(cli, built-in)</small> |
| − | * | + | * Gradient Anisotropic Diffusion <small>(cli, built-in)</small> |
| − | * | + | * Grayscale Fill Hole Image Filter <small>(cli, built-in)</small> |
| − | * | + | * Grayscale Grind Peak Image Filter <small>(cli, built-in)</small> |
| − | * | + | * Grayscale Model Maker <small>(cli, built-in)</small> |
| − | * | + | * Histogram Matching <small>(cli, built-in)</small> |
| − | * | + | * Image Label Combine <small>(cli, built-in)</small> |
| − | * | + | * Label Map Smoothing <small>(cli, built-in)</small> |
| − | * | + | * Label Statistics <small>(scripted, built-in)</small> |
| − | * | + | * Markups <small>(loadable, built-in)</small> |
| − | * | + | * Mask Scalar Volume <small>(cli, built-in)</small> |
| − | * | + | * Median Image Filter <small>(cli, built-in)</small> |
| − | * | + | * Merge Models <small>(cli, built-in)</small> |
| − | * | + | * Model Maker <small>(cli, built-in)</small> |
| − | * | + | * Models <small>(loadable, built-in)</small> |
| − | * | + | * Model To Label Map <small>(cli, built-in)</small> |
| − | * | + | * Multiply Scalar Volumes <small>(cli, built-in)</small> |
| − | * | + | * Multi Volume Explorer <small>(loadable, built-in)</small> |
| − | * | + | * Multi Volume Importer <small>(scripted, built-in)</small> |
| − | * | + | * N4ITKBias Field Correction <small>(cli, built-in)</small> |
| − | * | + | * Open IGTLink IF <small>(loadable, built-in)</small> |
| − | * | + | * Orient Scalar Volume <small>(cli, built-in)</small> |
| + | * Otsu Threshold Image Filter <small>(cli, built-in)</small> | ||
* Perform Metric Test <small>(cli, built-in)</small> | * Perform Metric Test <small>(cli, built-in)</small> | ||
| − | * | + | * PETStandard Uptake Value Computation <small>(cli, built-in)</small> |
| − | * | + | * Probe Volume With Model <small>(cli, built-in)</small> |
| − | * | + | * Reformat <small>(loadable, built-in)</small> |
| − | * | + | * Resample DTIVolume <small>(cli, built-in)</small> |
| − | * | + | * Resample Scalar Vector DWIVolume <small>(cli, built-in)</small> |
| − | * | + | * Resample Scalar Volume <small>(cli, built-in)</small> |
| − | * | + | * Robust Statistics Segmenter <small>(cli, built-in)</small> |
| − | * | + | * Sample Data <small>(scripted, built-in)</small> |
* Scene Performance <small>(scripted, built-in)</small> | * Scene Performance <small>(scripted, built-in)</small> | ||
| − | * | + | * Scene Views <small>(loadable, built-in)</small> |
| − | * | + | * Simple Filters <small>(scripted, built-in)</small> |
| − | * | + | * Simple Region Growing Segmentation <small>(cli, built-in)</small> |
* Slice Link Logic <small>(scripted, built-in)</small> | * Slice Link Logic <small>(scripted, built-in)</small> | ||
* Slicer4Minute <small>(scripted, built-in)</small> | * Slicer4Minute <small>(scripted, built-in)</small> | ||
| − | * | + | * Subject Hierarchy <small>(loadable, built-in)</small> |
| − | * | + | * Subtract Scalar Volumes <small>(cli, built-in)</small> |
| − | |||
* Test Grid Transform Registration <small>(cli, built-in)</small> | * Test Grid Transform Registration <small>(cli, built-in)</small> | ||
| − | * | + | * Threshold Scalar Volume <small>(cli, built-in)</small> |
| − | * | + | * Tractography Display <small>(loadable, built-in)</small> |
* Tractography Interactive Seeding <small>(loadable, built-in)</small> | * Tractography Interactive Seeding <small>(loadable, built-in)</small> | ||
| − | * | + | * Tractography Label Map Seeding <small>(cli, built-in)</small> |
| − | * | + | * Transforms <small>(loadable, built-in)</small> |
| − | * | + | * Units <small>(loadable, built-in)</small> |
* VBRAINSDemon Warp <small>(cli, built-in)</small> | * VBRAINSDemon Warp <small>(cli, built-in)</small> | ||
| − | * | + | * View Controllers <small>(loadable, built-in)</small> |
| − | + | * Volume Rendering <small>(loadable, built-in)</small> | |
| − | * | ||
* Volume Rendering Scene Close <small>(scripted, built-in)</small> | * Volume Rendering Scene Close <small>(scripted, built-in)</small> | ||
| − | * | + | * Volumes <small>(loadable, built-in)</small> |
| − | * | + | * Voting Binary Hole Filling Image Filter <small>(cli, built-in)</small> |
| − | * | + | * Welcome <small>(loadable, built-in)</small> |
== CarreraSlice == | == CarreraSlice == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
| Line 2,016: | Line 1,949: | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter KUtil] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter KUtil] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small> | ||
== CBC_3D_I2MConversion == | == CBC_3D_I2MConversion == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion Body Centric Cubic Mesh] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion CBC 3D I2MConversion] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion Mesh Compression] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion CBC 3D I2MConversion] extension)</small> |
== ChangeTracker == | == ChangeTracker == | ||
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ChangeTracker Change Tracker] <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ChangeTracker Change Tracker] extension)</small> |
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ChangeTracker Intensity Difference Metric] <small>(cli, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ChangeTracker Change Tracker] extension)</small> |
== CleaverExtension == | == CleaverExtension == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CleaverExtension Cleaver CLI] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CleaverExtension Cleaver Extension] extension)</small> |
== CMFreg == | == CMFreg == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Apply Matrix] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Compare Volumes] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Downsize] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Growing] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Label Addition] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Label Extraction] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Landmark Registration] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Mask Creation] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Non Growing] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg Surface Registration] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] extension)</small> |
== CornerAnnotation == | == CornerAnnotation == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CornerAnnotation Corner Annotation] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CornerAnnotation Corner Annotation] extension)</small> |
== CurveMaker == | == CurveMaker == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CurveMaker Curve Maker] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CurveMaker Curve Maker] extension)</small> |
== DiceComputation == | == DiceComputation == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DiceComputation Dice Computation] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DiceComputation Dice Computation] extension)</small> |
== ErodeDilateLabel == | == ErodeDilateLabel == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ErodeDilateLabel Dilate Label] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ErodeDilateLabel Erode Dilate Label] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ErodeDilateLabel Erode Label] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ErodeDilateLabel Erode Dilate Label] extension)</small> |
== FastGrowCutEffect == | == FastGrowCutEffect == | ||
| − | * [ | + | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut] <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> |
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] <small>(scripted, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] <small>(scripted, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small> | ||
== FinslerTractography == | == FinslerTractography == | ||
| − | * [ | + | * [http://www.nitrc.org/projects/finslertract/ Finsler Backtracing] <small>(cli, bundled in [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] extension)</small> |
| − | * [ | + | * [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] <small>(cli, bundled in [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] extension)</small> |
== GelDosimetryAnalysis == | == GelDosimetryAnalysis == | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small> | ||
== GyroGuide == | == GyroGuide == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/GyroGuide Gyro Guide] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/GyroGuide Gyro Guide] extension)</small> |
== IASEM == | == IASEM == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM Binary Watershed Effect] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEM] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM Bin Shrink] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEM] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM Double Threshold Effect] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEM] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEMImport] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEM] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEMImport Series] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEM] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM Label Object Statistics] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEM] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM Spacing Aware Curvature Diffusion] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEM] extension)</small> |
== iGyne == | == iGyne == | ||
| − | * [ | + | * [https://github.com/gpernelle/iGyne i Gyne] <small>(scripted, bundled in [https://github.com/gpernelle/iGyne i Gyne] extension)</small> |
== ImageMaker == | == ImageMaker == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ImageMaker Image Maker] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ImageMaker Image Maker] extension)</small> |
== IntensitySegmenter == | == IntensitySegmenter == | ||
| − | * [ | + | * [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] <small>(cli, bundled in [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] extension)</small> |
== LAScarSegmenter == | == LAScarSegmenter == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] extension)</small> |
== LongitudinalPETCT == | == LongitudinalPETCT == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT Longitudinal PETCT] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT Longitudinal PETCT] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT PETSUVImage Maker] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT Longitudinal PETCT] extension)</small> |
== MABMIS == | == MABMIS == | ||
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MABMIS IGR3D MABMIS Testing] <small>(cli, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MABMIS MABMIS] extension)</small> |
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MABMIS IGR3D MABMIS Training] <small>(cli, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MABMIS MABMIS] extension)</small> |
== MatlabBridge == | == MatlabBridge == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Commander] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Bridge] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Module Generator] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Bridge] extension)</small> |
== MultidimData == | == MultidimData == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Metafile Importer] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Multidim Data] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Sequence Browser] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Multidim Data] extension)</small> |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Sequences] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Multidim Data] extension)</small> |
== NeedleFinder == | == NeedleFinder == | ||
| − | * [ | + | * [https://github.com/gpernelle/NeedleFinder Needle Finder] <small>(scripted, bundled in [https://github.com/gpernelle/NeedleFinder Needle Finder] extension)</small> |
== PBNRR == | == PBNRR == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PBNRR PBNRR] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PBNRR PBNRR] extension)</small> |
== PercutaneousApproachAnalysis == | == PercutaneousApproachAnalysis == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/PercutaneousApproachAnalysis Percutaneous Approach Analysis] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/PercutaneousApproachAnalysis Percutaneous Approach Analysis] extension)</small> |
== PerkTutor == | == PerkTutor == | ||
| − | * [ | + | * [http://www.perktutor.org/ Perk Evaluator] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> |
| − | * [ | + | * [http://www.perktutor.org/ Python Metrics Calculator] <small>(scripted, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> |
| − | * [ | + | * [http://www.perktutor.org/ Transform Recorder] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> |
| − | * [ | + | * [http://www.perktutor.org/ Workflow Segmentation] <small>(loadable, bundled in [http://www.perktutor.org/ Perk Tutor] extension)</small> |
== PETDICOMExtension == | == PETDICOMExtension == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM SUVFactor Calculator] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small> |
== PkModeling == | == PkModeling == | ||
| − | * [ | + | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] <small>(cli, bundled in [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] extension)</small> |
== PortPlacement == | == PortPlacement == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PortPlacement Port Placement] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PortPlacement Port Placement] extension)</small> |
== PyDevRemoteDebug == | == PyDevRemoteDebug == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PyDevRemoteDebug Py Dev Remote Debug] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PyDevRemoteDebug Py Dev Remote Debug] extension)</small> |
| − | |||
| − | |||
| − | |||
== Scoliosis == | == Scoliosis == | ||
| − | * [ | + | * [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis Monitoring] <small>(scripted, bundled in [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis] extension)</small> |
| − | * [ | + | * [https://www.assembla.com/spaces/Scoliosis/wiki Spinal Curvature Measurement] <small>(scripted, bundled in [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis] extension)</small> |
== SegmentationAidedRegistration == | == SegmentationAidedRegistration == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small> |
== SlicerToKiwiExporter == | == SlicerToKiwiExporter == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SlicerToKiwiExporter Slicer To Kiwi Exporter] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SlicerToKiwiExporter Slicer To Kiwi Exporter] extension)</small> |
== SobolevSegmenter == | == SobolevSegmenter == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SobolevSegmenter Sobolev Segmenter] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SobolevSegmenter Sobolev Segmenter] extension)</small> |
== SwissSkullStripper == | == SwissSkullStripper == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SwissSkullStripper Swiss Skull Stripper] <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SwissSkullStripper Swiss Skull Stripper] extension)</small> |
== TCIABrowser == | == TCIABrowser == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] extension)</small> |
== ThingiverseBrowser == | == ThingiverseBrowser == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ThingiverseBrowser Thingiverse Browser] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ThingiverseBrowser Thingiverse Browser] extension)</small> |
== TrackerStabilizer == | == TrackerStabilizer == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/TrackerStabilizer Tracker Stabilizer] <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/TrackerStabilizer Tracker Stabilizer] extension)</small> |
| − | |||
| − | |||
| − | |||
== WindowLevelEffect == | == WindowLevelEffect == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/WindowLevelEffect Window Level Effect] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/WindowLevelEffect Window Level Effect] extension)</small> |
== XNATSlicer == | == XNATSlicer == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/XNATSlicer Xnat Slicer] <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/XNATSlicer XNATSlicer] extension)</small> |
= Extensions by name = | = Extensions by name = | ||
45 extensions: | 45 extensions: | ||
* [http://www.nitrc.org/projects/abc ABC] | * [http://www.nitrc.org/projects/abc ABC] | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation] |
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion CBC 3D I2MConversion] |
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ChangeTracker Change Tracker] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CleaverExtension Cleaver Extension] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CornerAnnotation Corner Annotation] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CurveMaker Curve Maker] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DiceComputation Dice Computation] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ErodeDilateLabel Erode Dilate Label] |
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | ||
| − | * [ | + | * [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/GyroGuide Gyro Guide] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEM] |
| − | * [ | + | * [https://github.com/gpernelle/iGyne i Gyne] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ImageMaker Image Maker] |
| − | * [ | + | * [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT Longitudinal PETCT] |
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MABMIS MABMIS] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Bridge] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Multidim Data] |
| − | * [ | + | * [https://github.com/gpernelle/NeedleFinder Needle Finder] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PBNRR PBNRR] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/PercutaneousApproachAnalysis Percutaneous Approach Analysis] |
| − | * [ | + | * [http://www.perktutor.org/ Perk Tutor] |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] | ||
| − | * [ | + | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PortPlacement Port Placement] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PyDevRemoteDebug Py Dev Remote Debug] |
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/4.2/Modules/Reporting Reporting] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/ResectionPlanner Resection Planner] |
| − | * [ | + | * [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis] |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SlicerToKiwiExporter Slicer To Kiwi Exporter] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SobolevSegmenter Sobolev Segmenter] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SwissSkullStripper Swiss Skull Stripper] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ThingiverseBrowser Thingiverse Browser] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/TrackerStabilizer Tracker Stabilizer] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/VolumeClip Volume Clip] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/WindowLevelEffect Window Level Effect] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/XNATSlicer XNATSlicer] |
= Extensions by category = | = Extensions by category = | ||
20 categories: | 20 categories: | ||
| Line 2,201: | Line 2,128: | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] | ||
== Developer Tools == | == Developer Tools == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ImageMaker Image Maker] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Bridge] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PyDevRemoteDebug Py Dev Remote Debug] |
== Editor Effects == | == Editor Effects == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/WindowLevelEffect Window Level Effect] |
== Exporter == | == Exporter == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SlicerToKiwiExporter Slicer To Kiwi Exporter] |
== Filtering == | == Filtering == | ||
=== Morphology === | === Morphology === | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ErodeDilateLabel Erode Dilate Label] |
== IGT == | == IGT == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PortPlacement Port Placement] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/GyroGuide Gyro Guide] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CornerAnnotation Corner Annotation] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/PercutaneousApproachAnalysis Percutaneous Approach Analysis] |
| − | * [ | + | * [https://github.com/gpernelle/NeedleFinder Needle Finder] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/TrackerStabilizer Tracker Stabilizer] |
| − | * [ | + | * [https://github.com/gpernelle/iGyne i Gyne] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/ResectionPlanner Resection Planner] |
== Informatics == | == Informatics == | ||
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/4.2/Modules/Reporting Reporting] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT Longitudinal PETCT] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CurveMaker Curve Maker] |
== Mesh Generation == | == Mesh Generation == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion CBC 3D I2MConversion] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CleaverExtension Cleaver Extension] |
== Microscopy == | == Microscopy == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEM] |
== Multidimensional data == | == Multidimensional data == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Multidim Data] |
== Quantification == | == Quantification == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DiceComputation Dice Computation] |
| − | * [ | + | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] |
== Radiotherapy == | == Radiotherapy == | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] | ||
== Registration == | == Registration == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PBNRR PBNRR] |
== Remote == | == Remote == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/XNATSlicer XNATSlicer] |
== Scoliosis == | == Scoliosis == | ||
| − | * [ | + | * [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis] |
== Segmentation == | == Segmentation == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SwissSkullStripper Swiss Skull Stripper] |
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] |
* [http://www.nitrc.org/projects/abc ABC] | * [http://www.nitrc.org/projects/abc ABC] | ||
| − | * [ | + | * [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] |
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MABMIS MABMIS] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SobolevSegmenter Sobolev Segmenter] |
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/VolumeClip Volume Clip] |
== Tractography == | == Tractography == | ||
| − | * [ | + | * [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] |
== Training == | == Training == | ||
| − | * [ | + | * [http://www.perktutor.org/ Perk Tutor] |
== Utilities == | == Utilities == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ThingiverseBrowser Thingiverse Browser] |
== Wizards == | == Wizards == | ||
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ChangeTracker Change Tracker] |
= Extensions by contributing organization = | = Extensions by contributing organization = | ||
54 contributing organizations: | 54 contributing organizations: | ||
| Line 2,313: | Line 2,240: | ||
* [[#Washington_University_in_St._Louis|Washington University in St. Louis]] | * [[#Washington_University_in_St._Louis|Washington University in St. Louis]] | ||
== Asclepios INRIA) and Nikos Chrisochoides (CRTC == | == Asclepios INRIA) and Nikos Chrisochoides (CRTC == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PBNRR PBNRR] |
== Brigham and Women's Hospital == | == Brigham and Women's Hospital == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ErodeDilateLabel Erode Dilate Label] |
== BWH == | == BWH == | ||
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ChangeTracker Change Tracker] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CurveMaker Curve Maker] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DiceComputation Dice Computation] |
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | ||
| − | * [ | + | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/TrackerStabilizer Tracker Stabilizer] |
== BWH & MGH == | == BWH & MGH == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | ||
| Line 2,331: | Line 2,258: | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | ||
== College of Information Engineering, Zhejiang University of Technology, Hangzhou, China == | == College of Information Engineering, Zhejiang University of Technology, Hangzhou, China == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/GyroGuide Gyro Guide] |
== Crisalix == | == Crisalix == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SwissSkullStripper Swiss Skull Stripper] |
== CRTC == | == CRTC == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion CBC 3D I2MConversion] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PBNRR PBNRR] |
== Department of Neurosurgery, PLA General Hospital, Beijing, China == | == Department of Neurosurgery, PLA General Hospital, Beijing, China == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/GyroGuide Gyro Guide] |
== Department of Orthodontics, UNC == | == Department of Orthodontics, UNC == | ||
| − | * [ | + | * [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] |
== GE == | == GE == | ||
| − | * [ | + | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] |
== GE GLobal Research == | == GE GLobal Research == | ||
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MABMIS MABMIS] |
== GT == | == GT == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | ||
== Isomics == | == Isomics == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | ||
| − | * [ | + | * [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SlicerToKiwiExporter Slicer To Kiwi Exporter] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/XNATSlicer XNATSlicer] |
== Kitware == | == Kitware == | ||
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ChangeTracker Change Tracker] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ImageMaker Image Maker] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Bridge] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PortPlacement Port Placement] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SlicerToKiwiExporter Slicer To Kiwi Exporter] |
== Moka Creative LLC, Washington University in St. Louis == | == Moka Creative LLC, Washington University in St. Louis == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/XNATSlicer XNATSlicer] |
== NIRAL, UNC == | == NIRAL, UNC == | ||
| − | * [ | + | * [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] |
== Noware == | == Noware == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SwissSkullStripper Swiss Skull Stripper] |
== PerkLab at Queen's University == | == PerkLab at Queen's University == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PyDevRemoteDebug Py Dev Remote Debug] |
== PerkLab, Queen's == | == PerkLab, Queen's == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Multidim Data] |
== PerkLab, Queen's University == | == PerkLab, Queen's University == | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Bridge] |
| − | * [ | + | * [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/VolumeClip Volume Clip] |
== PMH == | == PMH == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Multidim Data] |
== Queen's University == | == Queen's University == | ||
| − | * [ | + | * [http://www.perktutor.org/ Perk Tutor] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/ResectionPlanner Resection Planner] |
== Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto == | == Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Bridge] |
== SBU == | == SBU == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] |
== SCI Institute == | == SCI Institute == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CleaverExtension Cleaver Extension] |
== Shiga University of Medical Science, Japan == | == Shiga University of Medical Science, Japan == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CornerAnnotation Corner Annotation] |
== Shiga University of Medical Science, Japan, SPL == | == Shiga University of Medical Science, Japan, SPL == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/PercutaneousApproachAnalysis Percutaneous Approach Analysis] |
== SPL == | == SPL == | ||
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ChangeTracker Change Tracker] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/PercutaneousApproachAnalysis Percutaneous Approach Analysis] |
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/4.2/Modules/Reporting Reporting] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/WindowLevelEffect Window Level Effect] |
== SPL and BWH == | == SPL and BWH == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] |
== SPL B&W Harvard == | == SPL B&W Harvard == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PBNRR PBNRR] |
== SRI == | == SRI == | ||
| − | * [ | + | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] |
== Stony Brook University == | == Stony Brook University == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | ||
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | ||
== Surgical Planning Lab == | == Surgical Planning Lab == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT Longitudinal PETCT] |
== UAB == | == UAB == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | ||
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SobolevSegmenter Sobolev Segmenter] |
== UNC == | == UNC == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] |
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MABMIS MABMIS] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PortPlacement Port Placement] |
== Univ of Michigan == | == Univ of Michigan == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] |
== University College Cork == | == University College Cork == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation] |
== University of Bern == | == University of Bern == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SwissSkullStripper Swiss Skull Stripper] |
== University of Heidelberg == | == University of Heidelberg == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT Longitudinal PETCT] |
== University of Iowa == | == University of Iowa == | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] | ||
| Line 2,427: | Line 2,354: | ||
* [http://www.nitrc.org/projects/abc ABC] | * [http://www.nitrc.org/projects/abc ABC] | ||
== Utah == | == Utah == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | ||
== UWA == | == UWA == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ThingiverseBrowser Thingiverse Browser] |
== Washington University in St. Louis == | == Washington University in St. Louis == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/XNATSlicer XNATSlicer] |
= Extensions by contributing individual = | = Extensions by contributing individual = | ||
125 contributing individuals: | 125 contributing individuals: | ||
| Line 2,535: | Line 2,462: | ||
* [[#Yixun_Liu|Yixun Liu]] <small>(CRTC)</small> | * [[#Yixun_Liu|Yixun Liu]] <small>(CRTC)</small> | ||
== Akila Viswanathan == | == Akila Viswanathan == | ||
| − | * [ | + | * [https://github.com/gpernelle/iGyne i Gyne] |
| − | * [ | + | * [https://github.com/gpernelle/NeedleFinder Needle Finder] |
== Alan Morris == | == Alan Morris == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | ||
== Alex Yarmarkovich == | == Alex Yarmarkovich == | ||
| − | * [ | + | * [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] |
== Alireza Mehrtash == | == Alireza Mehrtash == | ||
| − | * [ | + | * [https://github.com/gpernelle/iGyne i Gyne] |
| − | * [ | + | * [https://github.com/gpernelle/NeedleFinder Needle Finder] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] |
== Allen Tannenbaum == | == Allen Tannenbaum == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | ||
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SobolevSegmenter Sobolev Segmenter] |
== Andinet Enquobahrie == | == Andinet Enquobahrie == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PortPlacement Port Placement] |
== Andras Lasso == | == Andras Lasso == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Bridge] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Multidim Data] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PyDevRemoteDebug Py Dev Remote Debug] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/TrackerStabilizer Tracker Stabilizer] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/VolumeClip Volume Clip] |
== Andre Mastmeyer == | == Andre Mastmeyer == | ||
| − | * [ | + | * [https://github.com/gpernelle/NeedleFinder Needle Finder] |
== Andrey Fedorov == | == Andrey Fedorov == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion CBC 3D I2MConversion] |
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ChangeTracker Change Tracker] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT Longitudinal PETCT] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PBNRR PBNRR] |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] | ||
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/4.2/Modules/Reporting Reporting] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/TCIABrowser TCIABrowser] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/WindowLevelEffect Window Level Effect] |
== Andriy Fedorov == | == Andriy Fedorov == | ||
| − | * [ | + | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] |
== Andriy Kot == | == Andriy Kot == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PBNRR PBNRR] |
== Antonio Damato == | == Antonio Damato == | ||
| − | * [ | + | * [https://github.com/gpernelle/iGyne i Gyne] |
| − | * [ | + | * [https://github.com/gpernelle/NeedleFinder Needle Finder] |
== Antonio Tristan-Vega == | == Antonio Tristan-Vega == | ||
| − | * [ | + | * [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] |
== Arie Nakhmani == | == Arie Nakhmani == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SobolevSegmenter Sobolev Segmenter] |
== Arnaud Gelas == | == Arnaud Gelas == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SwissSkullStripper Swiss Skull Stripper] |
== Atsushi Yamada == | == Atsushi Yamada == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CornerAnnotation Corner Annotation] |
== Beatriz Paniagua == | == Beatriz Paniagua == | ||
| − | * [ | + | * [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] |
== Bill Lorensen == | == Bill Lorensen == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SwissSkullStripper Swiss Skull Stripper] |
== Bradley Lowekamp == | == Bradley Lowekamp == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/IASEM IASEM] |
== Brig Bagley == | == Brig Bagley == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CleaverExtension Cleaver Extension] |
== Carl-Fredrik Westin == | == Carl-Fredrik Westin == | ||
| − | * [ | + | * [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] |
== Csaba Pinter == | == Csaba Pinter == | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] | ||
== Dan Marcus == | == Dan Marcus == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/XNATSlicer XNATSlicer] |
== Danny Perry == | == Danny Perry == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | ||
== Demian Wasssermann == | == Demian Wasssermann == | ||
| − | * [ | + | * [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] |
== Dinggang Shen == | == Dinggang Shen == | ||
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MABMIS MABMIS] |
== Ethan Ulrich == | == Ethan Ulrich == | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] | ||
== Fotis Drakopoulos == | == Fotis Drakopoulos == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion CBC 3D I2MConversion] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PBNRR PBNRR] |
== Francois Budin == | == Francois Budin == | ||
| − | * [ | + | * [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] |
== Franklin King == | == Franklin King == | ||
| − | * [ | + | * [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis] |
== Greg Gardner == | == Greg Gardner == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | ||
== Guillaume Pernelle == | == Guillaume Pernelle == | ||
| − | * [ | + | * [https://github.com/gpernelle/iGyne i Gyne] |
| − | * [ | + | * [https://github.com/gpernelle/NeedleFinder Needle Finder] |
== Ivan Kolesov == | == Ivan Kolesov == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | ||
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | ||
== Jan Egger == | == Jan Egger == | ||
| − | * [ | + | * [https://github.com/gpernelle/iGyne i Gyne] |
| − | * [ | + | * [https://github.com/gpernelle/NeedleFinder Needle Finder] |
== Jayender Jagadeesan == | == Jayender Jagadeesan == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/TrackerStabilizer Tracker Stabilizer] |
== Jean-Christophe Fillion-Robin == | == Jean-Christophe Fillion-Robin == | ||
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ChangeTracker Change Tracker] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Bridge] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SlicerToKiwiExporter Slicer To Kiwi Exporter] |
== Jennifer Andrea == | == Jennifer Andrea == | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] | ||
== Jiashu Zhang == | == Jiashu Zhang == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/GyroGuide Gyro Guide] |
== Jim Miller == | == Jim Miller == | ||
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MABMIS MABMIS] |
| − | * [ | + | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] |
== Jonathan Bronson == | == Jonathan Bronson == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CleaverExtension Cleaver Extension] |
== Josh Cates == | == Josh Cates == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | ||
== Julien Finet == | == Julien Finet == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ImageMaker Image Maker] |
== Junichi Tokuda == | == Junichi Tokuda == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CurveMaker Curve Maker] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ErodeDilateLabel Erode Dilate Label] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/PercutaneousApproachAnalysis Percutaneous Approach Analysis] |
== Karl Fritscher == | == Karl Fritscher == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | ||
== Kevin Wang == | == Kevin Wang == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MatlabBridge Matlab Bridge] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Multidim Data] |
== Kilian Pohl == | == Kilian Pohl == | ||
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ChangeTracker Change Tracker] |
== Koichiro Murakami == | == Koichiro Murakami == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/PercutaneousApproachAnalysis Percutaneous Approach Analysis] |
== Lauren Barber == | == Lauren Barber == | ||
| − | * [ | + | * [https://github.com/gpernelle/iGyne i Gyne] |
| − | * [ | + | * [https://github.com/gpernelle/NeedleFinder Needle Finder] |
== Laurent Chauvin == | == Laurent Chauvin == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DiceComputation Dice Computation] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/PercutaneousApproachAnalysis Percutaneous Approach Analysis] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/TrackerStabilizer Tracker Stabilizer] |
== Liang-Jia Zhu == | == Liang-Jia Zhu == | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | ||
| Line 2,673: | Line 2,600: | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | ||
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] |
== Luis G. Torres == | == Luis G. Torres == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PortPlacement Port Placement] |
== Luping Fang == | == Luping Fang == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/GyroGuide Gyro Guide] |
== Mahnaz Maddah == | == Mahnaz Maddah == | ||
| − | * [ | + | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] |
== Manson Winsauer == | == Manson Winsauer == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] |
== Marcel Prastawa == | == Marcel Prastawa == | ||
* [http://www.nitrc.org/projects/abc ABC] | * [http://www.nitrc.org/projects/abc ABC] | ||
== Matt Lougheed == | == Matt Lougheed == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php?title=Documentation/Nightly/Extensions/ResectionPlanner Resection Planner] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/VolumeClip Volume Clip] |
== Mattea Welch == | == Mattea Welch == | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] | ||
== Matthew Holden == | == Matthew Holden == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MultidimData Multidim Data] |
== Matthew S. Holden == | == Matthew S. Holden == | ||
| − | * [ | + | * [http://www.perktutor.org/ Perk Tutor] |
== Mauricio Reyes == | == Mauricio Reyes == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SwissSkullStripper Swiss Skull Stripper] |
== Ming-ching Chang == | == Ming-ching Chang == | ||
| − | * [ | + | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] |
== Minjeong Kim == | == Minjeong Kim == | ||
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MABMIS MABMIS] |
== Nabgha Fahrat == | == Nabgha Fahrat == | ||
| − | * [ | + | * [https://github.com/gpernelle/iGyne i Gyne] |
| − | * [ | + | * [https://github.com/gpernelle/NeedleFinder Needle Finder] |
== Nicole Aucoin == | == Nicole Aucoin == | ||
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/4.2/Modules/Reporting Reporting] |
== Nigel Goh == | == Nigel Goh == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ThingiverseBrowser Thingiverse Browser] |
== Nikos Chrisochoides == | == Nikos Chrisochoides == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion CBC 3D I2MConversion] |
== Olivier Clatz == | == Olivier Clatz == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PBNRR PBNRR] |
== Pat Marion == | == Pat Marion == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SlicerToKiwiExporter Slicer To Kiwi Exporter] |
== Patricio Vela == | == Patricio Vela == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | ||
== Paul Mercea == | == Paul Mercea == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LongitudinalPETCT Longitudinal PETCT] |
== Pengdong Xiao == | == Pengdong Xiao == | ||
| − | * [ | + | * [http://www.nitrc.org/projects/dentaltools/ Intensity Segmenter] |
== Peter Black == | == Peter Black == | ||
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ChangeTracker Change Tracker] |
== Peter Karasev == | == Peter Karasev == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | ||
== Peter Savadjiev == | == Peter Savadjiev == | ||
| − | * [ | + | * [http://www.nitrc.org/projects/finslertract/ Finsler Tractography] |
== Pietro Nardelli == | == Pietro Nardelli == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation] |
== Qing Pan == | == Qing Pan == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/GyroGuide Gyro Guide] |
== Rick Herrick == | == Rick Herrick == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/XNATSlicer XNATSlicer] |
== Rob MacLeod == | == Rob MacLeod == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | ||
== Ron Kikinis == | == Ron Kikinis == | ||
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ChangeTracker Change Tracker] |
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | ||
== Ruifeng Chen == | == Ruifeng Chen == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/GyroGuide Gyro Guide] |
== S == | == S == | ||
| − | * [ | + | * [https://github.com/gpernelle/iGyne i Gyne] |
| − | * [ | + | * [https://github.com/gpernelle/NeedleFinder Needle Finder] |
== Sam Song == | == Sam Song == | ||
| − | * [ | + | * [https://github.com/gpernelle/iGyne i Gyne] |
| − | * [ | + | * [https://github.com/gpernelle/NeedleFinder Needle Finder] |
== Stefan Bauer == | == Stefan Bauer == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SwissSkullStripper Swiss Skull Stripper] |
== Steve Pieper == | == Steve Pieper == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | ||
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/4.2/Modules/Reporting Reporting] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SlicerToKiwiExporter Slicer To Kiwi Exporter] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/WindowLevelEffect Window Level Effect] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/XNATSlicer XNATSlicer] |
== Sunil Kumar == | == Sunil Kumar == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/XNATSlicer XNATSlicer] |
== Sylvain Bouix == | == Sylvain Bouix == | ||
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | ||
== Tamas Ungi == | == Tamas Ungi == | ||
| − | * [ | + | * [http://www.perktutor.org/ Perk Tutor] |
| − | * [ | + | * [https://www.assembla.com/spaces/Scoliosis/wiki Scoliosis] |
== Thomas Fejes == | == Thomas Fejes == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/SwissSkullStripper Swiss Skull Stripper] |
== Tina Kapur == | == Tina Kapur == | ||
| − | * [ | + | * [https://github.com/gpernelle/iGyne i Gyne] |
| − | * [ | + | * [https://github.com/gpernelle/NeedleFinder Needle Finder] |
== Tobias Penzkofer == | == Tobias Penzkofer == | ||
| − | * [ | + | * [https://github.com/gpernelle/iGyne i Gyne] |
| − | * [ | + | * [https://github.com/gpernelle/NeedleFinder Needle Finder] |
== Vinicius Boen == | == Vinicius Boen == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Extensions/CMFreg CMFreg] |
== Xiaofeng Liu == | == Xiaofeng Liu == | ||
| − | * [ | + | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MABMIS MABMIS] |
== Xiaojun Chen == | == Xiaojun Chen == | ||
| − | * [ | + | * [https://github.com/gpernelle/iGyne i Gyne] |
| − | * [ | + | * [https://github.com/gpernelle/NeedleFinder Needle Finder] |
== Xiaolei Chen == | == Xiaolei Chen == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/GyroGuide Gyro Guide] |
== y Wells == | == y Wells == | ||
| − | * [ | + | * [https://github.com/gpernelle/iGyne i Gyne] |
| − | * [ | + | * [https://github.com/gpernelle/NeedleFinder Needle Finder] |
== Yi Gao == | == Yi Gao == | ||
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | * [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] | ||
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | * [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] | ||
| − | * [ | + | * [https://github.com/gpernelle/iGyne i Gyne] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/LAScarSegmenter LAScar Segmenter] |
| − | * [ | + | * [https://github.com/gpernelle/NeedleFinder Needle Finder] |
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] | ||
== Yingxuan Zhu == | == Yingxuan Zhu == | ||
| − | * [ | + | * [https://github.com/millerjv/PkModeling/wiki/PkModeling Pk Modeling] |
== Yixun Liu == | == Yixun Liu == | ||
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/CBC_3D_I2MConversion CBC 3D I2MConversion] |
| − | * [ | + | * [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PBNRR PBNRR] |
Revision as of 19:25, 23 December 2014
- Modules by name
- Modules by category
- Modules by contributing organization
- Modules by contributing individual
- Modules by type
- Modules by extension
- Extensions by name
- Extensions by category
- Extensions by contributing organization
- Extensions by contributing individual
List of extensions known to be broken
Modules by name
150 modules:
- ABC (cli, bundled in ABC extension)
- ACPCTransform (cli, built-in)
- Add Scalar Volumes (cli, built-in)
- Airway Segmentation CLI (cli, bundled in Airway Segmentation extension)
- Annotations (loadable, built-in)
- Apply Matrix (cli, bundled in CMFreg extension)
- Bin Shrink (cli, bundled in IASEM extension)
- Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
- BRAINSDemon Warp (cli, built-in)
- BRAINSDWICleanup (cli, built-in)
- BRAINSFit (cli, built-in)
- BRAINSLabel Stats (cli, built-in)
- BRAINSResample (cli, built-in)
- BRAINSResize (cli, built-in)
- BRAINSROIAuto (cli, built-in)
- BRAINSTransform Convert (cli, built-in)
- Carrera Slice (loadable, bundled in Carrera Slice extension)
- Cast Scalar Volume (cli, built-in)
- Change Tracker (scripted, bundled in Change Tracker extension)
- Checker Board Filter (cli, built-in)
- Cleaver CLI (cli, bundled in Cleaver Extension extension)
- Colors (loadable, built-in)
- Compare Volumes (scripted, bundled in CMFreg extension)
- Corner Annotation (scripted, bundled in Corner Annotation extension)
- Create DICOMSeries (cli, built-in)
- Crop Volume (loadable, built-in)
- Curvature Anisotropic Diffusion (cli, built-in)
- Curve Maker (scripted, bundled in Curve Maker extension)
- Data (loadable, built-in)
- Data Probe (scripted, built-in)
- Data Store (loadable, built-in)
- Dice Computation (loadable, bundled in Dice Computation extension)
- DICOM2Full Brain Tractography (scripted, built-in)
- Diffusion Tensor Scalar Measurements (cli, built-in)
- Diffusion Weighted Volume Masking (cli, built-in)
- Dilate Label (cli, bundled in Erode Dilate Label extension)
- Downsize (cli, bundled in CMFreg extension)
- DWIConvert (cli, built-in)
- DWIJoint Rician LMMSEFilter (cli, built-in)
- DWIRician LMMSEFilter (cli, built-in)
- DWITo DTIEstimation (cli, built-in)
- Editor (scripted, built-in)
- EMSegment (loadable, built-in)
- EMSegment Command Line (cli, built-in)
- EMSegment Quick (loadable, built-in)
- EMSegment Transform To New Format (cli, built-in)
- Endoscopy (scripted, built-in)
- Erode Label (cli, bundled in Erode Dilate Label extension)
- Extract Skeleton (cli, built-in)
- Fast Grow Cut (loadable, bundled in Fast Grow Cut Effect extension)
- Fast Grow Cut Segmenter (loadable, bundled in Carrera Slice extension)
- Fiber Bundle Label Select (cli, built-in)
- Fiber Bundle To Label Map (scripted, built-in)
- Fiber Tract Measurements (cli, built-in)
- Fiducial Registration (cli, built-in)
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
- Gaussian Blur Image Filter (cli, built-in)
- Gel Dosimetry Analysis Algo (loadable, bundled in Gel Dosimetry Analysis extension)
- Gradient Anisotropic Diffusion (cli, built-in)
- Grayscale Fill Hole Image Filter (cli, built-in)
- Grayscale Grind Peak Image Filter (cli, built-in)
- Grayscale Model Maker (cli, built-in)
- Growing (cli, bundled in CMFreg extension)
- Gyro Guide (scripted, bundled in Gyro Guide extension)
- Histogram Matching (cli, built-in)
- IASEMImport (cli, bundled in IASEM extension)
- IASEMImport Series (cli, bundled in IASEM extension)
- IGR3D MABMIS Testing (cli, bundled in MABMIS extension)
- IGR3D MABMIS Training (cli, bundled in MABMIS extension)
- i Gyne (scripted, bundled in i Gyne extension)
- Image Label Combine (cli, built-in)
- Intensity Difference Metric (cli, bundled in Change Tracker extension)
- Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
- KUtil (scripted, bundled in Carrera Slice extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Label Map Smoothing (cli, built-in)
- Label Object Statistics (scripted, bundled in IASEM extension)
- Label Statistics (scripted, built-in)
- Landmark Registration (scripted, bundled in CMFreg extension)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)
- Markups (loadable, built-in)
- Mask Creation (cli, bundled in CMFreg extension)
- Mask Scalar Volume (cli, built-in)
- Median Image Filter (cli, built-in)
- Merge Models (cli, built-in)
- Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
- Metafile Importer (loadable, bundled in Multidim Data extension)
- Model Maker (cli, built-in)
- Models (loadable, built-in)
- Model To Label Map (cli, built-in)
- Multiply Scalar Volumes (cli, built-in)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- N4ITKBias Field Correction (cli, built-in)
- Needle Finder (scripted, bundled in Needle Finder extension)
- Non Growing (cli, bundled in CMFreg extension)
- Open IGTLink IF (loadable, built-in)
- Orient Scalar Volume (cli, built-in)
- PBNRR (cli, bundled in PBNRR extension)
- Percutaneous Approach Analysis (scripted, bundled in Percutaneous Approach Analysis extension)
- Perform Metric Test (cli, built-in)
- Perk Evaluator (loadable, bundled in Perk Tutor extension)
- PETStandard Uptake Value Computation (cli, built-in)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- Pk Modeling (cli, bundled in Pk Modeling extension)
- Port Placement (scripted, bundled in Port Placement extension)
- Probe Volume With Model (cli, built-in)
- Python Metrics Calculator (scripted, bundled in Perk Tutor extension)
- Reformat (loadable, built-in)
- Resample DTIVolume (cli, built-in)
- Resample Scalar Vector DWIVolume (cli, built-in)
- Robust Statistics Segmenter (cli, built-in)
- Sample Data (scripted, built-in)
- Scene Views (loadable, built-in)
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
- Sequence Browser (loadable, bundled in Multidim Data extension)
- Sequences (loadable, bundled in Multidim Data extension)
- Simple Filters (scripted, built-in)
- Simple Region Growing Segmentation (cli, built-in)
- Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
- Sobolev Segmenter (cli, bundled in Sobolev Segmenter extension)
- Spacing Aware Curvature Diffusion (cli, bundled in IASEM extension)
- Spinal Curvature Measurement (scripted, bundled in Scoliosis extension)
- Subject Hierarchy (loadable, built-in)
- Subtract Scalar Volumes (cli, built-in)
- Surface Registration (scripted, bundled in CMFreg extension)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
- Swiss Skull Stripper (cli, bundled in Swiss Skull Stripper extension)
- TCIABrowser (scripted, bundled in TCIABrowser extension)
- Thingiverse Browser (scripted, bundled in Thingiverse Browser extension)
- Threshold Scalar Volume (cli, built-in)
- Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)
- Tractography Display (loadable, built-in)
- Tractography Interactive Seeding (loadable, built-in)
- Tractography Label Map Seeding (cli, built-in)
- Transform Recorder (loadable, bundled in Perk Tutor extension)
- Transforms (loadable, built-in)
- Units (loadable, built-in)
- VBRAINSDemon Warp (cli, built-in)
- View Controllers (loadable, built-in)
- Volume Rendering (loadable, built-in)
- Volumes (loadable, built-in)
- Voting Binary Hole Filling Image Filter (cli, built-in)
- Welcome (loadable, built-in)
- Window Level Effect (scripted, bundled in Window Level Effect extension)
- Workflow Segmentation (loadable, bundled in Perk Tutor extension)
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
Modules by category
30 categories:
- BRAINS
- CMF Registration
- Converters
- Developer Tools
- Diffusion
- Editor Effects
- Endoscopy
- Examples
- Exporter
- Filtering
- IGT
- Informatics
- Legacy
- Mesh Generation
- Mesh Generation
- Microscopy
- Multidimensional data
- Multi Volume Support
- Perk Tutor
- Quantification
- Registration
- Segmentation
- Slicelets
- Surface Models
- Testing
- Unspecified
- Utilities
- Wizards
- Work in Progress
- XNATSlicer
BRAINS
LabelStatistics
- BRAINSLabel Stats
CMF Registration
Voxelbase Registration
Converters
- Crop Volume
- Create DICOMSeries
- Orient Scalar Volume
Developer Tools
- Event Broker
- Double Arrays
- Py Dev Remote Debug
- Cameras
- Extension Wizard
- Execution Model Tour
- Image Maker
DICOM Plugins
- DICOMRWVMPlugin
- DICOMLongitudinal PETCTPlugin
- Multi Volume Importer Plugin
- DICOMPETSUVPlugin
- DICOMDiffusion Volume Plugin
- DICOMScalar Volume Plugin
- DICOMSlicer Data Bundle Plugin
Editor Extensions
Matlab
Diffusion
- Tractography Display
- DICOM2Full Brain Tractography
Diffusion Data Conversion
- DWIConvert
Diffusion Tensor Images
- Resample DTIVolume
- Diffusion Tensor Scalar Measurements
- Tractography Label Map Seeding
- Fiber Tract Measurements
- Tractography Interactive Seeding
Diffusion Weighted Images
- DWIRician LMMSEFilter
- DWIJoint Rician LMMSEFilter
- DWITo DTIEstimation
- Finsler Backtracing
- Resample Scalar Vector DWIVolume
- Finsler Tractography
- Diffusion Weighted Volume Masking
Tractography
- Fiber Bundle To Label Map
- Fiber Bundle Label Select
Editor Effects
Endoscopy
- Endoscopy
Examples
Exporter
Filtering
- Extract Skeleton
- Threshold Scalar Volume
- N4ITKBias Field Correction
- Simple Filters
- Image Label Combine
- Voting Binary Hole Filling Image Filter
- Histogram Matching
- Checker Board Filter
Arithmetic
- Multiply Scalar Volumes
- Add Scalar Volumes
- Cast Scalar Volume
- Subtract Scalar Volumes
- Mask Scalar Volume
Denoising
- Gradient Anisotropic Diffusion
- Median Image Filter
- Gaussian Blur Image Filter
- Curvature Anisotropic Diffusion
Morphology
- Grayscale Fill Hole Image Filter
- Erode Label
- Dilate Label
- Grayscale Grind Peak Image Filter
IGT
- Percutaneous Approach Analysis
- Port Placement
- Open IGTLink IF
- Needle Finder
- Tracker Stabilizer
- Gyro Guide
- i Gyne
- Corner Annotation
Informatics
- Annotations
- Markups
- Units
- Sample Data
- Subject Hierarchy
- Data
- Colors
- Curve Maker
- TCIABrowser
Legacy
Converters
- BSpline To Deformation Field
Diffusion
Denoising
- DWIUnbiased Non Local Means Filter
Diffusion Data Conversion
- DTIimport
- DTIexport
Filtering
- Otsu Threshold Image Filter
- Resample Scalar Volume
Registration
- Test Grid Transform Registration
- Expert Automated Registration
Work in Progress
Diffusion Tensor
Test
- Diffusion Tensor Test
Mesh Generation
MeshGeneration
Microscopy
Multidimensional data
MultiVolume Support
- Multi Volume Explorer
- Multi Volume Importer
Perk Tutor
Quantification
- PETStandard Uptake Value Computation
- SUVFactor Calculator
- Spinal Curvature Measurement
- Pk Modeling
- Label Statistics
- PETSUVImage Maker
- Dice Computation
- Data Probe
ChangeQuantification
Registration
- Transforms
- BRAINSResize
- Perform Metric Test
- BRAINSFit
- PBNRR
- BRAINSResample
Specialized
- ACPCTransform
- Fiducial Registration
- VBRAINSDemon Warp
- BRAINSDemon Warp
- Reformat
Segmentation
- Editor
- EMSegment Quick
- Simple Region Growing Segmentation
- EMSegment
- Airway Segmentation CLI
- LAScar Segmenter
- Sobolev Segmenter
- IGR3D MABMIS Testing
- Swiss Skull Stripper
- ABC
- IGR3D MABMIS Training
- Intensity Segmenter
Specialized
- EMSegment Command Line
- Robust Statistics Segmenter
- BRAINSROIAuto
Slicelets
Surface Models
- Model To Label Map
- Merge Models
- Probe Volume With Model
- Grayscale Model Maker
- Label Map Smoothing
- Model Maker
Testing
- Self Tests
- CLIROITest
- CLI4Test
- Threshold Threading Test
- Scoliosis Monitoring
- Performance Tests
- Slicer MRBTest
TestCases
- Slice Link Logic
- Atlas Tests
- RSNAQuant Tutorial
- Volume Rendering Scene Close
- test tractography display
- slicer Close Crash Bug2590
- Charting
- Scene Performance
- Markups In Compare Viewers Self Test
- fiber visibility crash2438
- scene Import2428
- RSNAVis Tutorial
- JRC2013Vis
- RSNA2012Prostate Demo
- Add Many Markups Fiducial Test
- Neurosurgical Planning Tutorial Markups Self Test
- Markups In Views Self Test
- Change Tracker Self Test
- Fiducial Layout Switch Bug1914
- View Controllers Slice Interpolation Bug1926
- Slicer4Minute
- label Toggle Bug2049
Unspecified
- BRAINSDWICleanup
Utilities
- Thingiverse Browser
- EMSegment Transform To New Format
- Data Store
BRAINS
- BRAINSTransform Convert
Wizards
Work in Progress
Informatics
TestCases
- Reporting Self Test
XNATSlicer
Modules by contributing organization
60 contributing organizations:
- Asclepios INRIA
- AZE R&D
- Brigham and Women's Hospital
- BWH
- BWH, SPL
- BWH, SUMS
- BWH/UAB
- College of Information Engineering, Zhejiang University of Technology, Hangzhou, China); Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China
- CRTC
- gatech
- GE
- Georgia Institute of Technology
- Georgia Tech
- IBM
- Isomics
- Isomics Inc.
- Isomics, Inc.
- Isomics, pieper@isomics.com
- Kitware
- Kitware)
- MGH
- Moka Creative, LLC, kumar.sunil.p@gmail.com
- MSC/NLM
- Noware
- Perk Lab at Queen's University
- Perk Lab, Queen's
- Perk Lab, Queen's University
- PMH
- Queen's
- Queen's University
- Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto
- SAIC-Frederick, NCI-Frederick
- SBU
- SCI Institute
- Shiga University of Medical Science, Japan, SPL
- SNR
- SPL
- SPL B&W Harvard
- SPL, BWH
- SPL, BWH, UPenn
- Stony Brook University
- SUMS
- UAB
- Uiowa
- UIowa
- UNC
- Univ of Michigan
- Univ. of Iowa
- University College Cork
- University of Alabama Birmingham
- University of Heidelberg
- University of Iowa
- University of Iowa) and Andrey Fedorov (SPL
- UPenn
- Utah
- UVa
- UWA
- Wash U-St. Louis, dmarcus@wustl.edu
- while at GE
Asclepios INRIA
AZE R&D
- JRC2013Vis
Brigham and Women's Hospital
- Corner Annotation (scripted, bundled in Corner Annotation extension)
- test tractography display
BWH
- Add Many Markups Fiducial Test
- Change Tracker Self Test
- Curve Maker (scripted, bundled in Curve Maker extension)
- Dice Computation (loadable, bundled in Dice Computation extension)
- DICOMRWVMPlugin
- Fast Grow Cut Effect (scripted, bundled in Fast Grow Cut Effect extension)
- Fiducial Layout Switch Bug1914
- Markups (loadable, built-in)
- Markups In Compare Viewers Self Test
- Markups In Views Self Test
- Neurosurgical Planning Tutorial Markups Self Test
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
- Volume Rendering Scene Close (scripted, built-in)
- Window Level Effect (scripted, bundled in Window Level Effect extension)
BWH, SPL
- Crop Volume (loadable, built-in)
BWH, SUMS
- Corner Annotation (scripted, bundled in Corner Annotation extension)
BWH/UAB
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
College of Information Engineering, Zhejiang University of Technology, Hangzhou, China); Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China
- Gyro Guide (scripted, bundled in Gyro Guide extension)
CRTC
- Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
- Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
- PBNRR (cli, bundled in PBNRR extension)
gatech
- Robust Statistics Segmenter (cli, built-in)
GE
- Add Scalar Volumes (cli, built-in)
- Charting (scripted, built-in)
- Checker Board Filter (cli, built-in)
- Create DICOMSeries (cli, built-in)
- Curvature Anisotropic Diffusion (cli, built-in)
- Diffusion Tensor Test (cli, built-in)
- DWIConvert (cli, built-in)
- Execution Model Tour (cli, built-in)
- Gradient Anisotropic Diffusion (cli, built-in)
- Grayscale Fill Hole Image Filter (cli, built-in)
- Grayscale Grind Peak Image Filter (cli, built-in)
- Grayscale Model Maker (cli, built-in)
- Histogram Matching (cli, built-in)
- Label Map Smoothing (cli, built-in)
- Median Image Filter (cli, built-in)
- Model Maker (cli, built-in)
- Model To Label Map (cli, built-in)
- Multiply Scalar Volumes (cli, built-in)
- Orient Scalar Volume (cli, built-in)
- Otsu Threshold Image Filter (cli, built-in)
- Pk Modeling (cli, bundled in Pk Modeling extension)
- Resample Scalar Volume (cli, built-in)
- Simple Region Growing Segmentation (cli, built-in)
- Slice Link Logic (scripted, built-in)
- Slicer4Minute (scripted, built-in)
- Spacing Aware Curvature Diffusion (cli, bundled in IASEM extension)
- Subtract Scalar Volumes (cli, built-in)
- View Controllers (loadable, built-in)
- View Controllers Slice Interpolation Bug1926
- Voting Binary Hole Filling Image Filter (cli, built-in)
Georgia Institute of Technology
- Carrera Slice Effect (scripted, bundled in Carrera Slice extension)
Georgia Tech
- Carrera Slice (loadable, bundled in Carrera Slice extension)
IBM
- Annotations (loadable, built-in)
Isomics
- Atlas Tests
- Binary Watershed Effect (scripted, bundled in IASEM extension)
- Compare Volumes (scripted, bundled in CMFreg extension)
- Data (loadable, built-in)
- Data Probe (scripted, built-in)
- Editor (scripted, built-in)
- Endoscopy (scripted, built-in)
- fiber visibility crash2438
- Fiber Bundle To Label Map (scripted, built-in)
- Label Statistics (scripted, built-in)
- label Toggle Bug2049
- Landmark Registration (scripted, bundled in CMFreg extension)
- Models (loadable, built-in)
- Performance Tests
- RSNA2012Prostate Demo
- RSNAQuant Tutorial
- RSNAVis Tutorial
- Sample Data (scripted, built-in)
- scene Import2428
- Self Tests
- Simple Filters (scripted, built-in)
- slicer Close Crash Bug2590
- Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
- Tractography Interactive Seeding (loadable, built-in)
- Transforms (loadable, built-in)
- View Controllers (loadable, built-in)
- Volume Rendering (loadable, built-in)
- Volumes (loadable, built-in)
Isomics Inc.
- DICOMDiffusion Volume Plugin
- DICOMLongitudinal PETCTPlugin
- DICOMScalar Volume Plugin
- DICOMSlicer Data Bundle Plugin
- Slicer MRBTest
- Threshold Threading Test
Isomics, Inc.
- Carrera Slice Effect (scripted, bundled in Carrera Slice extension)
Isomics, pieper@isomics.com
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
Kitware
- Cameras (loadable, built-in)
- Colors (loadable, built-in)
- Data (loadable, built-in)
- Data Store (loadable, built-in)
- Double Arrays (loadable, built-in)
- Event Broker
- Expert Automated Registration (cli, built-in)
- Extension Wizard (scripted, built-in)
- Extract Skeleton (cli, built-in)
- Fast Grow Cut (loadable, bundled in Fast Grow Cut Effect extension)
- Fast Grow Cut Segmenter (loadable, bundled in Carrera Slice extension)
- fiber visibility crash2438
- Fiducial Registration (cli, built-in)
- Gaussian Blur Image Filter (cli, built-in)
- Image Maker (cli, bundled in Image Maker extension)
- label Toggle Bug2049
- Matlab Commander (cli, bundled in Matlab Bridge extension)
- Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
- Models (loadable, built-in)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- Port Placement (scripted, bundled in Port Placement extension)
- Reformat (loadable, built-in)
- Sample Data (scripted, built-in)
- Scene Performance (scripted, built-in)
- Simple Filters (scripted, built-in)
- Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
- Threshold Scalar Volume (cli, built-in)
- Tractography Display (loadable, built-in)
- Transforms (loadable, built-in)
- Units (loadable, built-in)
- View Controllers (loadable, built-in)
- Volume Rendering (loadable, built-in)
- Volumes (loadable, built-in)
- Welcome (loadable, built-in)
Kitware)
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
MGH
- Pk Modeling (cli, bundled in Pk Modeling extension)
Moka Creative, LLC, kumar.sunil.p@gmail.com
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
MSC/NLM
- Label Object Statistics (scripted, bundled in IASEM extension)
- Simple Filters (scripted, built-in)
Noware
- Swiss Skull Stripper (cli, bundled in Swiss Skull Stripper extension)
PerkLab at Queen's University
- Py Dev Remote Debug (scripted, bundled in Py Dev Remote Debug extension)
PerkLab, Queen's
- Metafile Importer (loadable, bundled in Multidim Data extension)
- Sequence Browser (loadable, bundled in Multidim Data extension)
- Sequences (loadable, bundled in Multidim Data extension)
- Transforms (loadable, built-in)
PerkLab, Queen's University
- Matlab Commander (cli, bundled in Matlab Bridge extension)
- Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
PMH
- Sequence Browser (loadable, bundled in Multidim Data extension)
- Sequences (loadable, bundled in Multidim Data extension)
Queen's
- Data (loadable, built-in)
- Gel Dosimetry Analysis Algo (loadable, bundled in Gel Dosimetry Analysis extension)
- Subject Hierarchy (loadable, built-in)
Queen's University
- Perk Evaluator (loadable, bundled in Perk Tutor extension)
- Python Metrics Calculator (scripted, bundled in Perk Tutor extension)
- Scoliosis Monitoring (scripted, bundled in Scoliosis extension)
- Spinal Curvature Measurement (scripted, bundled in Scoliosis extension)
- Transform Recorder (loadable, bundled in Perk Tutor extension)
- Workflow Segmentation (loadable, bundled in Perk Tutor extension)
Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto
- Matlab Commander (cli, bundled in Matlab Bridge extension)
- Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
SAIC-Frederick, NCI-Frederick
- Volume Rendering (loadable, built-in)
SBU
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
SCI Institute
- Cleaver CLI (cli, bundled in Cleaver Extension extension)
Shiga University of Medical Science, Japan, SPL
- Percutaneous Approach Analysis (scripted, bundled in Percutaneous Approach Analysis extension)
SNR
- Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)
SPL
- DICOM2Full Brain Tractography (scripted, built-in)
- Percutaneous Approach Analysis (scripted, bundled in Percutaneous Approach Analysis extension)
- Pk Modeling (cli, bundled in Pk Modeling extension)
- Reporting Self Test
- Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)
SPL B&W Harvard
SPL, BWH
- ACPCTransform (cli, built-in)
- Annotations (loadable, built-in)
- BSpline To Deformation Field (cli, built-in)
- Cast Scalar Volume (cli, built-in)
- Colors (loadable, built-in)
- Data (loadable, built-in)
- Diffusion Tensor Scalar Measurements (cli, built-in)
- Diffusion Weighted Volume Masking (cli, built-in)
- DTIexport (cli, built-in)
- DTIimport (cli, built-in)
- DWITo DTIEstimation (cli, built-in)
- Fiber Tract Measurements (cli, built-in)
- Fiducial Registration (cli, built-in)
- Grayscale Model Maker (cli, built-in)
- Image Label Combine (cli, built-in)
- Mask Scalar Volume (cli, built-in)
- Merge Models (cli, built-in)
- Model Maker (cli, built-in)
- Models (loadable, built-in)
- Model To Label Map (cli, built-in)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- N4ITKBias Field Correction (cli, built-in)
- PETStandard Uptake Value Computation (cli, built-in)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- Probe Volume With Model (cli, built-in)
- Robust Statistics Segmenter (cli, built-in)
- Scene Views (loadable, built-in)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
- TCIABrowser (scripted, bundled in TCIABrowser extension)
- Test Grid Transform Registration (cli, built-in)
- Threshold Scalar Volume (cli, built-in)
- Tractography Label Map Seeding (cli, built-in)
- View Controllers (loadable, built-in)
- Volume Rendering (loadable, built-in)
- Volumes (loadable, built-in)
- Welcome (loadable, built-in)
SPL, BWH, UPenn
- Merge Models (cli, built-in)
Stony Brook University
- Carrera Slice Effect (scripted, bundled in Carrera Slice extension)
- Fast Grow Cut Effect (scripted, bundled in Fast Grow Cut Effect extension)
SUMS
- Corner Annotation (scripted, bundled in Corner Annotation extension)
UAB
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
- Sobolev Segmenter (cli, bundled in Sobolev Segmenter extension)
Uiowa
- DWIConvert (cli, built-in)
UIowa
- DWIConvert (cli, built-in)
UNC
- DWIRician LMMSEFilter (cli, built-in)
- Extract Skeleton (cli, built-in)
- Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
- Port Placement (scripted, bundled in Port Placement extension)
- Resample DTIVolume (cli, built-in)
- Resample Scalar Vector DWIVolume (cli, built-in)
Univ of Michigan
- Surface Registration (scripted, bundled in CMFreg extension)
Univ. of Iowa
- DICOMPETSUVPlugin
- DICOMRWVMPlugin
University College Cork
- Airway Segmentation CLI (cli, bundled in Airway Segmentation extension)
University of Alabama Birmingham
- Carrera Slice Effect (scripted, bundled in Carrera Slice extension)
- Fast Grow Cut Effect (scripted, bundled in Fast Grow Cut Effect extension)
University of Heidelberg
- Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)
University of Iowa
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
University of Iowa) and Andrey Fedorov (SPL
- Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)
UPenn
- Annotations (loadable, built-in)
- EMSegment (loadable, built-in)
- N4ITKBias Field Correction (cli, built-in)
- Scene Views (loadable, built-in)
Utah
- Label Map Smoothing (cli, built-in)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
UVa
- DWIJoint Rician LMMSEFilter (cli, built-in)
- DWIRician LMMSEFilter (cli, built-in)
- DWIUnbiased Non Local Means Filter (cli, built-in)
UWA
- Thingiverse Browser (scripted, bundled in Thingiverse Browser extension)
WashU-St. Louis, dmarcus@wustl.edu
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
while at GE
- Pk Modeling (cli, bundled in Pk Modeling extension)
Modules by contributing individual
146 contributing individuals:
- Akila Viswanathan
- Alan Morris (Utah)
- Alex Yarmakovich (Isomics)
- Alex Yarmarkovich (Kitware))
- Ali Ghayoor
- Alireza Mehrtash (SPL and BWH)
- Allen Tannenbaum (Stony Brook University)
- Analysis Laboratory
- Andinet Enquobahrie (Kitware)
- Andras Lasso (PerkLab, Queen's University)
- Andreas Freudling (SPL, BWH)
- Andrey Fedorov (SPL B&W Harvard)
- Andriy Kot (CRTC)
- Anonymous
- Antonio Damato
- Antonio Tristan Vega (UVa)
- Arie Nakhmani (UAB)
- Atsushi Yamada (SUMS)
- Beatriz Paniagua from Department of Orthodontics (UNC)
- Benjamin Long (Kitware)
- Bill Lorensen (Noware)
- Brad Davis
- Bradley Lowekamp (MSC/NLM)
- BWH
- Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez (Kitware))
- Casey B Goodlett (Kitware)
- Charles Marion (Kitware)
- Csaba Pinter (PerkLab, Queen's University)
- Dan Marcus (Washington University in St. Louis)
- Daniel Blezek (GE)
- Daniel Haehn (UPenn)
- Danny Perry (Utah)
- Demian Wassermann (Brigham and Women's Hospital)
- Dinggang Shen (UNC)
- Dirk Padfield (GE)
- Dominik Meier (SPL, BWH)
- Ethan Ulrich (Univ. of Iowa)
- ez (UVa)
- Fotis Drakopoulos (CRTC)
- Francois Budin (NIRAL, UNC)
- Franklin King (PerkLab, Queen's University)
- Greg Gardner (Utah)
- Greg Harris
- Guido Gerig (UNC)
- Guillaume Pernelle
- Hans J. Johnson
- Hans Johnson (UIowa)
- hans-johnson -at- uiowa.edu
- http://www.psychiatry.uiowa.edu
- Ivan Kolesov (Stony Brook University)
- Jan Egger
- Jayender Jagadeesan (BWH)
- Jean-Baptiste Berger (Kitware)
- Jean-Christophe Fillion-Robin (Kitware)
- Jim Miller (GE)
- Johan Andruejol (Kitware)
- John Evans (MGH)
- Jonathan Bronson (SCI Institute)
- Josh Cates (Utah)
- Joy Matsui (UIowa)
- Julien Finet (Kitware)
- Julien Jomier (Kitware)
- Junichi Tokuda (BWH)
- Kent Williams (UIowa)
- Kevin Wang (Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto)
- Kilian Pohl (UPenn)
- Koichiro Murakami (BWH, SUMS)
- Lauren Barber
- Lauren O'Donnell (SPL, BWH)
- Laurent Chauvin (BWH)
- Liang-Jia Zhu (UAB)
- Liangjia Zhu (Stony Brook University)
- Luis G. Torres (UNC)
- Luping Fang (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
- Marc Niethammer (UNC)
- Marcel Prastawa prastawa@sci.utah.edu
- Mark Scully (Uiowa)
- Markus Van Tol (University of Iowa) and Andrey Fedorov (SPL)
- Martin Styner (UNC)
- Mason Winsauer
- Matthew Holden (Queen's University)
- Matthew S. Holden (Queen's University)
- Matthew Woehlke (Kitware)
- Michael Jeulin-Lagarrigue (Kitware)
- Minjeong Kim (UNC)
- Nabgha Fahrat
- Neuro Image Resarch
- Nicholas Herlambang (AZE R&D)
- Nick Tustison (UPenn)
- Nicole Aucoin (BWH)
- Nigel Goh (UWA)
- Nikos Chrisochoides (CRTC)
- Olivier Clatz (Asclepios INRIA) and Nikos Chrisochoides (CRTC)
- Pat Marion (Kitware)
- Patricio Vela (Georgia Institute of Technology)
- Paul Mercea (University of Heidelberg)
- Pengdong Xiao (Department of Orthodontics, UNC)
- Peter Black (BWH)
- Peter Karasev (Georgia Tech)
- Peter Savadjiev (Kitware))
- Pierre Seroul (UNC)
- Pietro Nardelli (University College Cork)
- Polina Goll
- Qing Pan (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
- Raul San Jose (SPL, BWH)
- Rob Mac Leod (Utah)
- Ron Kikinis (BWH)
- Ross Whitaker (Utah)
- Ruifeng Chen (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
- S
- Sam Song
- Santiago Aja Fern (UVa)
- Sebastien Barré (Kitware)
- Sebastien Barre
- Shigeyuki Naka (SUMS)
- Soichiro Tani (SUMS)
- Sonia Pujol (SPL, BWH)
- Stephen Aylward (Kitware)
- Stephen R Aylward (Kitware)
- Steve Pieper (Isomics Inc.)
- Sunil Kumar (Moka Creative, LLC, kumar.sunil.p@gmail.com)
- Sylvain Bouix (BWH)
- Tamas Ungi (PerkLab, Queen's University)
- the University of North Carolina at Chapel Hill (UNC)
- Tina Kapur
- Tobias Penzkofer
- Tohru Tani (SUMS)
- UNC Medical School
- Uof M School of Dentistry
- Uof M School Of Dentistry
- Vince Magnotta (UIowa)
- Vincent A. Magnotta
- Vincent Magnotta
- Vinicius Boen (Univ of Michigan)
- Wendy Plesniak (SPL, BWH)
- Xiaodong Tao (GE)
- Xiaofeng Liu (GE GLobal Research)
- Xiaojun Chen
- y Wells
- Yanling Liu (SAIC-Frederick, NCI-Frederick)
- Yi Gao (BWH/UAB)
- Yinglin Lee (SPL, BWH)
- Yingxuan Zhu (GE)
- Yixun Liu (CRTC)
- Yong Zhang (IBM)
- Yumin Yuan
Akila Viswanathan
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
Alan Morris
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
Alex Yarmakovich
- Models (loadable, built-in)
- Tractography Interactive Seeding (loadable, built-in)
Alex Yarmarkovich
- Data (loadable, built-in)
- Fiber Tract Measurements (cli, built-in)
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
- Image Label Combine (cli, built-in)
- Transforms (loadable, built-in)
- Volume Rendering (loadable, built-in)
- Volumes (loadable, built-in)
Ali Ghayoor
- BRAINSTransform Convert (cli, built-in)
- Perform Metric Test (cli, built-in)
Alireza Mehrtash
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
- TCIABrowser (scripted, bundled in TCIABrowser extension)
Allen Tannenbaum
- Carrera Slice Effect (scripted, bundled in Carrera Slice extension)
- Fast Grow Cut Effect (scripted, bundled in Fast Grow Cut Effect extension)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- Robust Statistics Segmenter (cli, built-in)
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
- Sobolev Segmenter (cli, bundled in Sobolev Segmenter extension)
Analysis Laboratory
- Apply Matrix (cli, bundled in CMFreg extension)
- Downsize (cli, bundled in CMFreg extension)
- Growing (cli, bundled in CMFreg extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Mask Creation (cli, bundled in CMFreg extension)
- Non Growing (cli, bundled in CMFreg extension)
Andinet Enquobahrie
- Port Placement (scripted, bundled in Port Placement extension)
Andras Lasso
- Matlab Commander (cli, bundled in Matlab Bridge extension)
- Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
- Metafile Importer (loadable, bundled in Multidim Data extension)
- Py Dev Remote Debug (scripted, bundled in Py Dev Remote Debug extension)
- Sequence Browser (loadable, bundled in Multidim Data extension)
- Sequences (loadable, bundled in Multidim Data extension)
- Transforms (loadable, built-in)
Andreas Freudling
- Volume Rendering (loadable, built-in)
Andrey Fedorov
- Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
- BSpline To Deformation Field (cli, built-in)
- Change Tracker (scripted, bundled in Change Tracker extension)
- Change Tracker Self Test
- Crop Volume (loadable, built-in)
- DICOMRWVMPlugin
- Intensity Difference Metric (cli, bundled in Change Tracker extension)
- Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- Multi Volume Importer Plugin
- N4ITKBias Field Correction (cli, built-in)
- PBNRR (cli, bundled in PBNRR extension)
- Pk Modeling (cli, bundled in Pk Modeling extension)
- Reporting Self Test
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
- TCIABrowser (scripted, bundled in TCIABrowser extension)
- Window Level Effect (scripted, bundled in Window Level Effect extension)
Andriy Kot
Anonymous
- CLIROITest (cli, built-in)
- EMSegment Transform To New Format (cli, built-in)
Antonio Damato
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
Antonio Tristan Vega
- DWIJoint Rician LMMSEFilter (cli, built-in)
- DWIRician LMMSEFilter (cli, built-in)
- DWIUnbiased Non Local Means Filter (cli, built-in)
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
Arie Nakhmani
- Sobolev Segmenter (cli, bundled in Sobolev Segmenter extension)
Atsushi Yamada
- Corner Annotation (scripted, bundled in Corner Annotation extension)
Beatriz Paniagua from Department of Orthodontics
- Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
Benjamin Long
- Sample Data (scripted, built-in)
Bill Lorensen
- Add Scalar Volumes (cli, built-in)
- Checker Board Filter (cli, built-in)
- Create DICOMSeries (cli, built-in)
- Curvature Anisotropic Diffusion (cli, built-in)
- Diffusion Tensor Test (cli, built-in)
- Execution Model Tour (cli, built-in)
- Gradient Anisotropic Diffusion (cli, built-in)
- Grayscale Fill Hole Image Filter (cli, built-in)
- Grayscale Grind Peak Image Filter (cli, built-in)
- Grayscale Model Maker (cli, built-in)
- Histogram Matching (cli, built-in)
- Median Image Filter (cli, built-in)
- Model Maker (cli, built-in)
- Multiply Scalar Volumes (cli, built-in)
- Orient Scalar Volume (cli, built-in)
- Otsu Threshold Image Filter (cli, built-in)
- Resample Scalar Volume (cli, built-in)
- Spacing Aware Curvature Diffusion (cli, bundled in IASEM extension)
- Subtract Scalar Volumes (cli, built-in)
- Swiss Skull Stripper (cli, bundled in Swiss Skull Stripper extension)
- Voting Binary Hole Filling Image Filter (cli, built-in)
Brad Davis
- EMSegment Command Line (cli, built-in)
Bradley Lowekamp
- Bin Shrink (cli, bundled in IASEM extension)
- Double Threshold Effect (scripted, bundled in IASEM extension)
- IASEMImport (cli, bundled in IASEM extension)
- IASEMImport Series (cli, bundled in IASEM extension)
- Label Object Statistics (scripted, bundled in IASEM extension)
- Simple Filters (scripted, built-in)
- Spacing Aware Curvature Diffusion (cli, bundled in IASEM extension)
BWH
- Multi Volume Importer Plugin
Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
Casey B Goodlett
- Expert Automated Registration (cli, built-in)
- Fiducial Registration (cli, built-in)
Charles Marion
- Data Store (loadable, built-in)
Csaba Pinter
- Data (loadable, built-in)
- Gel Dosimetry Analysis Algo (loadable, bundled in Gel Dosimetry Analysis extension)
- Subject Hierarchy (loadable, built-in)
Dan Marcus
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
Daniel Blezek
- Execution Model Tour (cli, built-in)
Daniel Haehn
- Annotations (loadable, built-in)
- EMSegment (loadable, built-in)
- EMSegment Command Line (cli, built-in)
- Merge Models (cli, built-in)
- Scene Views (loadable, built-in)
Danny Perry
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
Demian Wassermann
- DICOM2Full Brain Tractography (scripted, built-in)
- Diffusion Weighted Volume Masking (cli, built-in)
- Fiber Bundle Label Select (cli, built-in)
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
- test tractography display
- Tractography Label Map Seeding (cli, built-in)
Dinggang Shen
- IGR3D MABMIS Testing (cli, bundled in MABMIS extension)
- IGR3D MABMIS Training (cli, bundled in MABMIS extension)
Dirk Padfield
- Label Map Smoothing (cli, built-in)
Dominik Meier
- Fiducial Registration (cli, built-in)
Ethan Ulrich
- DICOMPETSUVPlugin
- DICOMRWVMPlugin
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
ez
- DWIJoint Rician LMMSEFilter (cli, built-in)
- DWIRician LMMSEFilter (cli, built-in)
- DWIUnbiased Non Local Means Filter (cli, built-in)
Fotis Drakopoulos
- Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
- Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
- PBNRR (cli, bundled in PBNRR extension)
Francois Budin
- Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
- Resample DTIVolume (cli, built-in)
- Resample Scalar Vector DWIVolume (cli, built-in)
Franklin King
- Scoliosis Monitoring (scripted, bundled in Scoliosis extension)
- Spinal Curvature Measurement (scripted, bundled in Scoliosis extension)
- Transforms (loadable, built-in)
Greg Gardner
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
Greg Harris
- BRAINSDemon Warp (cli, built-in)
- BRAINSResample (cli, built-in)
- VBRAINSDemon Warp (cli, built-in)
Guido Gerig
- Extract Skeleton (cli, built-in)
Guillaume Pernelle
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
Hans J. Johnson
- BRAINSDemon Warp (cli, built-in)
- BRAINSFit (cli, built-in)
- BRAINSROIAuto (cli, built-in)
- BRAINSTransform Convert (cli, built-in)
- VBRAINSDemon Warp (cli, built-in)
Hans Johnson
- BRAINSResample (cli, built-in)
- BRAINSResize (cli, built-in)
- DWIConvert (cli, built-in)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
hans-johnson -at- uiowa.edu
- BRAINSFit (cli, built-in)
- BRAINSROIAuto (cli, built-in)
http://www.psychiatry.uiowa.edu
- BRAINSFit (cli, built-in)
- BRAINSROIAuto (cli, built-in)
Ivan Kolesov
- Carrera Slice (loadable, bundled in Carrera Slice extension)
- Carrera Slice Effect (scripted, bundled in Carrera Slice extension)
- Fast Grow Cut Effect (scripted, bundled in Fast Grow Cut Effect extension)
Jan Egger
Jayender Jagadeesan
- Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)
Jean-Baptiste Berger
- Data Store (loadable, built-in)
Jean-Christophe Fillion-Robin
- CLI4Test
- Data Store (loadable, built-in)
- Fast Grow Cut (loadable, bundled in Fast Grow Cut Effect extension)
- Fast Grow Cut Segmenter (loadable, bundled in Carrera Slice extension)
- fiber visibility crash2438
- label Toggle Bug2049
- Matlab Commander (cli, bundled in Matlab Bridge extension)
- Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- Sample Data (scripted, built-in)
- Simple Filters (scripted, built-in)
- Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
- Transforms (loadable, built-in)
- View Controllers (loadable, built-in)
- Welcome (loadable, built-in)
Jim Miller
- Charting (scripted, built-in)
- Pk Modeling (cli, bundled in Pk Modeling extension)
- Simple Region Growing Segmentation (cli, built-in)
- Slice Link Logic (scripted, built-in)
- Slicer4Minute (scripted, built-in)
- View Controllers (loadable, built-in)
- View Controllers Slice Interpolation Bug1926
Johan Andruejol
- Units (loadable, built-in)
John Evans
- Pk Modeling (cli, bundled in Pk Modeling extension)
Jonathan Bronson
- Cleaver CLI (cli, bundled in Cleaver Extension extension)
Josh Cates
- Label Map Smoothing (cli, built-in)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
Joy Matsui
- DWIConvert (cli, built-in)
Julien Finet
- Cameras (loadable, built-in)
- Colors (loadable, built-in)
- Data (loadable, built-in)
- Double Arrays (loadable, built-in)
- Event Broker
- Image Maker (cli, bundled in Image Maker extension)
- Models (loadable, built-in)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- Scene Performance (scripted, built-in)
- Threshold Scalar Volume (cli, built-in)
- Tractography Display (loadable, built-in)
- Transforms (loadable, built-in)
- Units (loadable, built-in)
- Volume Rendering (loadable, built-in)
- Volumes (loadable, built-in)
Julien Jomier
- Gaussian Blur Image Filter (cli, built-in)
Junichi Tokuda
- Corner Annotation (scripted, bundled in Corner Annotation extension)
- Curve Maker (scripted, bundled in Curve Maker extension)
- Dilate Label (cli, bundled in Erode Dilate Label extension)
- Erode Label (cli, bundled in Erode Dilate Label extension)
- Percutaneous Approach Analysis (scripted, bundled in Percutaneous Approach Analysis extension)
Kent Williams
- BRAINSDWICleanup (cli, built-in)
- BRAINSTransform Convert (cli, built-in)
- DWIConvert (cli, built-in)
Kevin Wang
- Matlab Commander (cli, bundled in Matlab Bridge extension)
- Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
- Sequence Browser (loadable, bundled in Multidim Data extension)
- Sequences (loadable, bundled in Multidim Data extension)
Kilian Pohl
- Annotations (loadable, built-in)
- Change Tracker (scripted, bundled in Change Tracker extension)
- EMSegment (loadable, built-in)
- EMSegment Command Line (cli, built-in)
- Scene Views (loadable, built-in)
Koichiro Murakami
- Corner Annotation (scripted, bundled in Corner Annotation extension)
- Percutaneous Approach Analysis (scripted, bundled in Percutaneous Approach Analysis extension)
Lauren Barber
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
Lauren O'Donnell
- Fiber Bundle Label Select (cli, built-in)
- Probe Volume With Model (cli, built-in)
Laurent Chauvin
- Curve Maker (scripted, bundled in Curve Maker extension)
- Dice Computation (loadable, bundled in Dice Computation extension)
- Percutaneous Approach Analysis (scripted, bundled in Percutaneous Approach Analysis extension)
- Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)
Liang-Jia Zhu
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
Liangjia Zhu
- Carrera Slice Effect (scripted, bundled in Carrera Slice extension)
- Fast Grow Cut Effect (scripted, bundled in Fast Grow Cut Effect extension)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
Luis G. Torres
- Port Placement (scripted, bundled in Port Placement extension)
Luping Fang
- Gyro Guide (scripted, bundled in Gyro Guide extension)
Marc Niethammer
- DWIRician LMMSEFilter (cli, built-in)
Marcel Prastawa prastawa@sci.utah.edu
Mark Scully
- DWIConvert (cli, built-in)
Markus Van Tol
- Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
Martin Styner
- Extract Skeleton (cli, built-in)
Mason Winsauer
- Apply Matrix (cli, bundled in CMFreg extension)
- Downsize (cli, bundled in CMFreg extension)
- Growing (cli, bundled in CMFreg extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Mask Creation (cli, bundled in CMFreg extension)
- Non Growing (cli, bundled in CMFreg extension)
Matthew Holden
- Metafile Importer (loadable, bundled in Multidim Data extension)
- Python Metrics Calculator (scripted, bundled in Perk Tutor extension)
- Sequence Browser (loadable, bundled in Multidim Data extension)
- Sequences (loadable, bundled in Multidim Data extension)
Matthew S. Holden
- Perk Evaluator (loadable, bundled in Perk Tutor extension)
- Transform Recorder (loadable, bundled in Perk Tutor extension)
- Workflow Segmentation (loadable, bundled in Perk Tutor extension)
Matthew Woehlke
- Extension Wizard (scripted, built-in)
Michael Jeulin-Lagarrigue
- Reformat (loadable, built-in)
Minjeong Kim
- IGR3D MABMIS Testing (cli, bundled in MABMIS extension)
- IGR3D MABMIS Training (cli, bundled in MABMIS extension)
Nabgha Fahrat
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
Neuro Image Resarch
- Apply Matrix (cli, bundled in CMFreg extension)
- Downsize (cli, bundled in CMFreg extension)
- Growing (cli, bundled in CMFreg extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Mask Creation (cli, bundled in CMFreg extension)
- Non Growing (cli, bundled in CMFreg extension)
Nicholas Herlambang
- JRC2013Vis
Nick Tustison
- N4ITKBias Field Correction (cli, built-in)
Nicole Aucoin
- ACPCTransform (cli, built-in)
- Add Many Markups Fiducial Test
- Annotations (loadable, built-in)
- Cast Scalar Volume (cli, built-in)
- Colors (loadable, built-in)
- Data (loadable, built-in)
- Fiducial Layout Switch Bug1914
- Grayscale Model Maker (cli, built-in)
- Markups (loadable, built-in)
- Markups In Compare Viewers Self Test
- Markups In Views Self Test
- Mask Scalar Volume (cli, built-in)
- Merge Models (cli, built-in)
- Model Maker (cli, built-in)
- Models (loadable, built-in)
- Model To Label Map (cli, built-in)
- Neurosurgical Planning Tutorial Markups Self Test
- PETStandard Uptake Value Computation (cli, built-in)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- Scene Views (loadable, built-in)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
- Threshold Scalar Volume (cli, built-in)
- Volume Rendering Scene Close (scripted, built-in)
- Volumes (loadable, built-in)
Nigel Goh
- Thingiverse Browser (scripted, bundled in Thingiverse Browser extension)
Nikos Chrisochoides
- Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
- Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
- PBNRR (cli, bundled in PBNRR extension)
Olivier Clatz
Pat Marion
- Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
Patricio Vela
- Carrera Slice Effect (scripted, bundled in Carrera Slice extension)
Paul Mercea
- Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)
Pengdong Xiao
- Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
Peter Black
- Change Tracker (scripted, bundled in Change Tracker extension)
Peter Karasev
- Carrera Slice (loadable, bundled in Carrera Slice extension)
- Carrera Slice Effect (scripted, bundled in Carrera Slice extension)
Peter Savadjiev
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
Pierre Seroul
- Extract Skeleton (cli, built-in)
Pietro Nardelli
- Airway Segmentation CLI (cli, bundled in Airway Segmentation extension)
Polina Goll
- EMSegment Command Line (cli, built-in)
Qing Pan
- Gyro Guide (scripted, bundled in Gyro Guide extension)
Raul San Jose
- Diffusion Tensor Scalar Measurements (cli, built-in)
- DWITo DTIEstimation (cli, built-in)
- Tractography Label Map Seeding (cli, built-in)
Rob MacLeod
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
Ron Kikinis
- ACPCTransform (cli, built-in)
- Cast Scalar Volume (cli, built-in)
- Change Tracker (scripted, bundled in Change Tracker extension)
- Crop Volume (loadable, built-in)
- Fast Grow Cut Effect (scripted, bundled in Fast Grow Cut Effect extension)
- Mask Scalar Volume (cli, built-in)
- Merge Models (cli, built-in)
- Model Maker (cli, built-in)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- N4ITKBias Field Correction (cli, built-in)
- PETStandard Uptake Value Computation (cli, built-in)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- Robust Statistics Segmenter (cli, built-in)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
- Threshold Scalar Volume (cli, built-in)
- View Controllers (loadable, built-in)
- Volume Rendering (loadable, built-in)
Ross Whitaker
- Label Map Smoothing (cli, built-in)
Ruifeng Chen
- Gyro Guide (scripted, bundled in Gyro Guide extension)
S
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
Sam Song
Santiago Aja Fern
- DWIJoint Rician LMMSEFilter (cli, built-in)
- DWIRician LMMSEFilter (cli, built-in)
- DWIUnbiased Non Local Means Filter (cli, built-in)
Sebastien Barré
- Cameras (loadable, built-in)
Sebastien Barre
- EMSegment Command Line (cli, built-in)
Shigeyuki Naka
- Corner Annotation (scripted, bundled in Corner Annotation extension)
Soichiro Tani
- Corner Annotation (scripted, bundled in Corner Annotation extension)
Sonia Pujol
- Dice Computation (loadable, bundled in Dice Computation extension)
- DTIexport (cli, built-in)
- DTIimport (cli, built-in)
Stephen Aylward
- Extract Skeleton (cli, built-in)
- Gaussian Blur Image Filter (cli, built-in)
Stephen R Aylward
- Expert Automated Registration (cli, built-in)
Steve Pieper
- Atlas Tests
- Binary Watershed Effect (scripted, bundled in IASEM extension)
- Carrera Slice Effect (scripted, bundled in Carrera Slice extension)
- Compare Volumes (scripted, bundled in CMFreg extension)
- Data Probe (scripted, built-in)
- DICOMDiffusion Volume Plugin
- DICOMLongitudinal PETCTPlugin
- DICOMScalar Volume Plugin
- DICOMSlicer Data Bundle Plugin
- Editor (scripted, built-in)
- Endoscopy (scripted, built-in)
- fiber visibility crash2438
- Fiber Bundle To Label Map (scripted, built-in)
- Label Statistics (scripted, built-in)
- label Toggle Bug2049
- Landmark Registration (scripted, bundled in CMFreg extension)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- Performance Tests
- RSNA2012Prostate Demo
- RSNAQuant Tutorial
- RSNAVis Tutorial
- Sample Data (scripted, built-in)
- scene Import2428
- Self Tests
- Simple Filters (scripted, built-in)
- slicer Close Crash Bug2590
- Slicer MRBTest
- Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
- Threshold Threading Test
- View Controllers (loadable, built-in)
- Volumes (loadable, built-in)
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
Sunil Kumar
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
Sylvain Bouix
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
Tamas Ungi
- Perk Evaluator (loadable, bundled in Perk Tutor extension)
- Python Metrics Calculator (scripted, bundled in Perk Tutor extension)
- Scoliosis Monitoring (scripted, bundled in Scoliosis extension)
- Spinal Curvature Measurement (scripted, bundled in Scoliosis extension)
- Transform Recorder (loadable, bundled in Perk Tutor extension)
- Workflow Segmentation (loadable, bundled in Perk Tutor extension)
the University of North Carolina at Chapel Hill
- Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
Tina Kapur
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
Tobias Penzkofer
Tohru Tani
- Corner Annotation (scripted, bundled in Corner Annotation extension)
UNC Medical School
- Apply Matrix (cli, bundled in CMFreg extension)
- Downsize (cli, bundled in CMFreg extension)
- Growing (cli, bundled in CMFreg extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Mask Creation (cli, bundled in CMFreg extension)
- Non Growing (cli, bundled in CMFreg extension)
UofM School of Dentistry
- Apply Matrix (cli, bundled in CMFreg extension)
- Downsize (cli, bundled in CMFreg extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Mask Creation (cli, bundled in CMFreg extension)
- Non Growing (cli, bundled in CMFreg extension)
UofM School Of Dentistry
Vince Magnotta
- DWIConvert (cli, built-in)
Vincent A. Magnotta
- BRAINSLabel Stats (cli, built-in)
Vincent Magnotta
- BRAINSResample (cli, built-in)
Vinicius Boen
- Apply Matrix (cli, bundled in CMFreg extension)
- Downsize (cli, bundled in CMFreg extension)
- Growing (cli, bundled in CMFreg extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Mask Creation (cli, bundled in CMFreg extension)
- Non Growing (cli, bundled in CMFreg extension)
- Surface Registration (scripted, bundled in CMFreg extension)
Wendy Plesniak
- Annotations (loadable, built-in)
- PETStandard Uptake Value Computation (cli, built-in)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- Scene Views (loadable, built-in)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
- View Controllers (loadable, built-in)
- Welcome (loadable, built-in)
Xiaodong Tao
- DWIConvert (cli, built-in)
- Model To Label Map (cli, built-in)
Xiaofeng Liu
- IGR3D MABMIS Testing (cli, bundled in MABMIS extension)
- IGR3D MABMIS Training (cli, bundled in MABMIS extension)
Xiaojun Chen
y Wells
- i Gyne (scripted, bundled in i Gyne extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
Yanling Liu
- Volume Rendering (loadable, built-in)
Yi Gao
- Carrera Slice Effect (scripted, bundled in Carrera Slice extension)
- Fast Grow Cut Effect (scripted, bundled in Fast Grow Cut Effect extension)
- i Gyne (scripted, bundled in i Gyne extension)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- Needle Finder (scripted, bundled in Needle Finder extension)
- Robust Statistics Segmenter (cli, built-in)
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
Yinglin Lee
- Test Grid Transform Registration (cli, built-in)
Yingxuan Zhu
- Pk Modeling (cli, bundled in Pk Modeling extension)
Yixun Liu
- Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
- Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
- PBNRR (cli, bundled in PBNRR extension)
Yong Zhang
- Annotations (loadable, built-in)
Yumin Yuan
- EMSegment Command Line (cli, built-in)
Modules by type
3 types:
cli
- ABC (cli, bundled in ABC extension)
- ACPCTransform (cli, built-in)
- Add Scalar Volumes (cli, built-in)
- Airway Segmentation CLI (cli, bundled in Airway Segmentation extension)
- Apply Matrix (cli, bundled in CMFreg extension)
- Bin Shrink (cli, bundled in IASEM extension)
- Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
- BRAINSDemon Warp (cli, built-in)
- BRAINSDWICleanup (cli, built-in)
- BRAINSFit (cli, built-in)
- BRAINSLabel Stats (cli, built-in)
- BRAINSResample (cli, built-in)
- BRAINSResize (cli, built-in)
- BRAINSROIAuto (cli, built-in)
- BRAINSTransform Convert (cli, built-in)
- BSpline To Deformation Field (cli, built-in)
- Cast Scalar Volume (cli, built-in)
- Checker Board Filter (cli, built-in)
- Cleaver CLI (cli, bundled in Cleaver Extension extension)
- CLIROITest (cli, built-in)
- Create DICOMSeries (cli, built-in)
- Curvature Anisotropic Diffusion (cli, built-in)
- Diffusion Tensor Scalar Measurements (cli, built-in)
- Diffusion Tensor Test (cli, built-in)
- Diffusion Weighted Volume Masking (cli, built-in)
- Dilate Label (cli, bundled in Erode Dilate Label extension)
- Downsize (cli, bundled in CMFreg extension)
- DTIexport (cli, built-in)
- DTIimport (cli, built-in)
- DWIConvert (cli, built-in)
- DWIJoint Rician LMMSEFilter (cli, built-in)
- DWIRician LMMSEFilter (cli, built-in)
- DWITo DTIEstimation (cli, built-in)
- DWIUnbiased Non Local Means Filter (cli, built-in)
- EMSegment Command Line (cli, built-in)
- EMSegment Transform To New Format (cli, built-in)
- Erode Label (cli, bundled in Erode Dilate Label extension)
- Execution Model Tour (cli, built-in)
- Expert Automated Registration (cli, built-in)
- Extract Skeleton (cli, built-in)
- Fiber Bundle Label Select (cli, built-in)
- Fiber Tract Measurements (cli, built-in)
- Fiducial Registration (cli, built-in)
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
- Gaussian Blur Image Filter (cli, built-in)
- Gradient Anisotropic Diffusion (cli, built-in)
- Grayscale Fill Hole Image Filter (cli, built-in)
- Grayscale Grind Peak Image Filter (cli, built-in)
- Grayscale Model Maker (cli, built-in)
- Growing (cli, bundled in CMFreg extension)
- Histogram Matching (cli, built-in)
- IASEMImport (cli, bundled in IASEM extension)
- IASEMImport Series (cli, bundled in IASEM extension)
- IGR3D MABMIS Testing (cli, bundled in MABMIS extension)
- IGR3D MABMIS Training (cli, bundled in MABMIS extension)
- Image Label Combine (cli, built-in)
- Image Maker (cli, bundled in Image Maker extension)
- Intensity Difference Metric (cli, bundled in Change Tracker extension)
- Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Label Map Smoothing (cli, built-in)
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
- Mask Creation (cli, bundled in CMFreg extension)
- Mask Scalar Volume (cli, built-in)
- Matlab Commander (cli, bundled in Matlab Bridge extension)
- Median Image Filter (cli, built-in)
- Merge Models (cli, built-in)
- Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
- Model Maker (cli, built-in)
- Model To Label Map (cli, built-in)
- Multiply Scalar Volumes (cli, built-in)
- N4ITKBias Field Correction (cli, built-in)
- Non Growing (cli, bundled in CMFreg extension)
- Orient Scalar Volume (cli, built-in)
- Otsu Threshold Image Filter (cli, built-in)
- PBNRR (cli, bundled in PBNRR extension)
- Perform Metric Test (cli, built-in)
- PETStandard Uptake Value Computation (cli, built-in)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
- Pk Modeling (cli, bundled in Pk Modeling extension)
- Probe Volume With Model (cli, built-in)
- Resample DTIVolume (cli, built-in)
- Resample Scalar Vector DWIVolume (cli, built-in)
- Resample Scalar Volume (cli, built-in)
- Robust Statistics Segmenter (cli, built-in)
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
- Simple Region Growing Segmentation (cli, built-in)
- Sobolev Segmenter (cli, bundled in Sobolev Segmenter extension)
- Spacing Aware Curvature Diffusion (cli, bundled in IASEM extension)
- Subtract Scalar Volumes (cli, built-in)
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
- Swiss Skull Stripper (cli, bundled in Swiss Skull Stripper extension)
- Test Grid Transform Registration (cli, built-in)
- Threshold Scalar Volume (cli, built-in)
- Tractography Label Map Seeding (cli, built-in)
- VBRAINSDemon Warp (cli, built-in)
- Voting Binary Hole Filling Image Filter (cli, built-in)
loadable
- Annotations (loadable, built-in)
- Cameras (loadable, built-in)
- Carrera Slice (loadable, bundled in Carrera Slice extension)
- Colors (loadable, built-in)
- Crop Volume (loadable, built-in)
- Data (loadable, built-in)
- Data Store (loadable, built-in)
- Dice Computation (loadable, bundled in Dice Computation extension)
- Double Arrays (loadable, built-in)
- EMSegment (loadable, built-in)
- EMSegment Quick (loadable, built-in)
- Fast Grow Cut (loadable, bundled in Fast Grow Cut Effect extension)
- Fast Grow Cut Segmenter (loadable, bundled in Carrera Slice extension)
- Gel Dosimetry Analysis Algo (loadable, bundled in Gel Dosimetry Analysis extension)
- Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)
- Markups (loadable, built-in)
- Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
- Metafile Importer (loadable, bundled in Multidim Data extension)
- Models (loadable, built-in)
- Multi Volume Explorer (loadable, built-in)
- Open IGTLink IF (loadable, built-in)
- Perk Evaluator (loadable, bundled in Perk Tutor extension)
- Reformat (loadable, built-in)
- Scene Views (loadable, built-in)
- Sequence Browser (loadable, bundled in Multidim Data extension)
- Sequences (loadable, bundled in Multidim Data extension)
- Subject Hierarchy (loadable, built-in)
- Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)
- Tractography Display (loadable, built-in)
- Tractography Interactive Seeding (loadable, built-in)
- Transform Recorder (loadable, bundled in Perk Tutor extension)
- Transforms (loadable, built-in)
- Units (loadable, built-in)
- View Controllers (loadable, built-in)
- Volume Rendering (loadable, built-in)
- Volumes (loadable, built-in)
- Welcome (loadable, built-in)
- Workflow Segmentation (loadable, bundled in Perk Tutor extension)
scripted
- Binary Watershed Effect (scripted, bundled in IASEM extension)
- Carrera Slice Effect (scripted, bundled in Carrera Slice extension)
- Change Tracker (scripted, bundled in Change Tracker extension)
- Charting (scripted, built-in)
- Compare Volumes (scripted, bundled in CMFreg extension)
- Corner Annotation (scripted, bundled in Corner Annotation extension)
- Curve Maker (scripted, bundled in Curve Maker extension)
- Data Probe (scripted, built-in)
- DICOM2Full Brain Tractography (scripted, built-in)
- Double Threshold Effect (scripted, bundled in IASEM extension)
- Editor (scripted, built-in)
- Endoscopy (scripted, built-in)
- Extension Wizard (scripted, built-in)
- Fast Grow Cut Effect (scripted, bundled in Fast Grow Cut Effect extension)
- Fiber Bundle To Label Map (scripted, built-in)
- Gyro Guide (scripted, bundled in Gyro Guide extension)
- i Gyne (scripted, bundled in i Gyne extension)
- KUtil (scripted, bundled in Carrera Slice extension)
- Label Object Statistics (scripted, bundled in IASEM extension)
- Label Statistics (scripted, built-in)
- Landmark Registration (scripted, bundled in CMFreg extension)
- Multi Volume Importer (scripted, built-in)
- Needle Finder (scripted, bundled in Needle Finder extension)
- Percutaneous Approach Analysis (scripted, bundled in Percutaneous Approach Analysis extension)
- Port Placement (scripted, bundled in Port Placement extension)
- Py Dev Remote Debug (scripted, bundled in Py Dev Remote Debug extension)
- Python Metrics Calculator (scripted, bundled in Perk Tutor extension)
- Sample Data (scripted, built-in)
- Scene Performance (scripted, built-in)
- Scoliosis Monitoring (scripted, bundled in Scoliosis extension)
- Simple Filters (scripted, built-in)
- Slice Link Logic (scripted, built-in)
- Slicer4Minute (scripted, built-in)
- Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
- Spinal Curvature Measurement (scripted, bundled in Scoliosis extension)
- Surface Registration (scripted, bundled in CMFreg extension)
- TCIABrowser (scripted, bundled in TCIABrowser extension)
- Thingiverse Browser (scripted, bundled in Thingiverse Browser extension)
- Volume Rendering Scene Close (scripted, built-in)
- Window Level Effect (scripted, bundled in Window Level Effect extension)
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
Modules by extension
46 extensions:
- ABC
- Airway Segmentation
- builtin
- Carrera Slice
- CBC 3D I2MConversion
- Change Tracker
- Cleaver Extension
- CMFreg
- Corner Annotation
- Curve Maker
- Dice Computation
- Erode Dilate Label
- Fast Grow Cut Effect
- Finsler Tractography
- Gel Dosimetry Analysis
- Gyro Guide
- IASEM
- i Gyne
- Image Maker
- Intensity Segmenter
- LAScar Segmenter
- Longitudinal PETCT
- MABMIS
- Matlab Bridge
- Multidim Data
- Needle Finder
- PBNRR
- Percutaneous Approach Analysis
- Perk Tutor
- PETDICOMExtension
- Pk Modeling
- Port Placement
- Py Dev Remote Debug
- Scoliosis
- Segmentation Aided Registration
- Slicer To Kiwi Exporter
- Sobolev Segmenter
- Swiss Skull Stripper
- TCIABrowser
- Thingiverse Browser
- Tracker Stabilizer
- Window Level Effect
- XNATSlicer
ABC
AirwaySegmentation
- Airway Segmentation CLI (cli, bundled in Airway Segmentation extension)
builtin
- ACPCTransform (cli, built-in)
- Add Scalar Volumes (cli, built-in)
- Annotations (loadable, built-in)
- BRAINSDemon Warp (cli, built-in)
- BRAINSDWICleanup (cli, built-in)
- BRAINSFit (cli, built-in)
- BRAINSLabel Stats (cli, built-in)
- BRAINSResample (cli, built-in)
- BRAINSResize (cli, built-in)
- BRAINSROIAuto (cli, built-in)
- BRAINSTransform Convert (cli, built-in)
- BSpline To Deformation Field (cli, built-in)
- Cameras (loadable, built-in)
- Cast Scalar Volume (cli, built-in)
- Charting (scripted, built-in)
- Checker Board Filter (cli, built-in)
- CLIROITest (cli, built-in)
- Colors (loadable, built-in)
- Create DICOMSeries (cli, built-in)
- Crop Volume (loadable, built-in)
- Curvature Anisotropic Diffusion (cli, built-in)
- Data (loadable, built-in)
- Data Probe (scripted, built-in)
- Data Store (loadable, built-in)
- DICOM2Full Brain Tractography (scripted, built-in)
- Diffusion Tensor Scalar Measurements (cli, built-in)
- Diffusion Tensor Test (cli, built-in)
- Diffusion Weighted Volume Masking (cli, built-in)
- Double Arrays (loadable, built-in)
- DTIexport (cli, built-in)
- DTIimport (cli, built-in)
- DWIConvert (cli, built-in)
- DWIJoint Rician LMMSEFilter (cli, built-in)
- DWIRician LMMSEFilter (cli, built-in)
- DWITo DTIEstimation (cli, built-in)
- DWIUnbiased Non Local Means Filter (cli, built-in)
- Editor (scripted, built-in)
- EMSegment (loadable, built-in)
- EMSegment Command Line (cli, built-in)
- EMSegment Quick (loadable, built-in)
- EMSegment Transform To New Format (cli, built-in)
- Endoscopy (scripted, built-in)
- Execution Model Tour (cli, built-in)
- Expert Automated Registration (cli, built-in)
- Extension Wizard (scripted, built-in)
- Extract Skeleton (cli, built-in)
- Fiber Bundle Label Select (cli, built-in)
- Fiber Bundle To Label Map (scripted, built-in)
- Fiber Tract Measurements (cli, built-in)
- Fiducial Registration (cli, built-in)
- Gaussian Blur Image Filter (cli, built-in)
- Gradient Anisotropic Diffusion (cli, built-in)
- Grayscale Fill Hole Image Filter (cli, built-in)
- Grayscale Grind Peak Image Filter (cli, built-in)
- Grayscale Model Maker (cli, built-in)
- Histogram Matching (cli, built-in)
- Image Label Combine (cli, built-in)
- Label Map Smoothing (cli, built-in)
- Label Statistics (scripted, built-in)
- Markups (loadable, built-in)
- Mask Scalar Volume (cli, built-in)
- Median Image Filter (cli, built-in)
- Merge Models (cli, built-in)
- Model Maker (cli, built-in)
- Models (loadable, built-in)
- Model To Label Map (cli, built-in)
- Multiply Scalar Volumes (cli, built-in)
- Multi Volume Explorer (loadable, built-in)
- Multi Volume Importer (scripted, built-in)
- N4ITKBias Field Correction (cli, built-in)
- Open IGTLink IF (loadable, built-in)
- Orient Scalar Volume (cli, built-in)
- Otsu Threshold Image Filter (cli, built-in)
- Perform Metric Test (cli, built-in)
- PETStandard Uptake Value Computation (cli, built-in)
- Probe Volume With Model (cli, built-in)
- Reformat (loadable, built-in)
- Resample DTIVolume (cli, built-in)
- Resample Scalar Vector DWIVolume (cli, built-in)
- Resample Scalar Volume (cli, built-in)
- Robust Statistics Segmenter (cli, built-in)
- Sample Data (scripted, built-in)
- Scene Performance (scripted, built-in)
- Scene Views (loadable, built-in)
- Simple Filters (scripted, built-in)
- Simple Region Growing Segmentation (cli, built-in)
- Slice Link Logic (scripted, built-in)
- Slicer4Minute (scripted, built-in)
- Subject Hierarchy (loadable, built-in)
- Subtract Scalar Volumes (cli, built-in)
- Test Grid Transform Registration (cli, built-in)
- Threshold Scalar Volume (cli, built-in)
- Tractography Display (loadable, built-in)
- Tractography Interactive Seeding (loadable, built-in)
- Tractography Label Map Seeding (cli, built-in)
- Transforms (loadable, built-in)
- Units (loadable, built-in)
- VBRAINSDemon Warp (cli, built-in)
- View Controllers (loadable, built-in)
- Volume Rendering (loadable, built-in)
- Volume Rendering Scene Close (scripted, built-in)
- Volumes (loadable, built-in)
- Voting Binary Hole Filling Image Filter (cli, built-in)
- Welcome (loadable, built-in)
CarreraSlice
- Carrera Slice (loadable, bundled in Carrera Slice extension)
- Carrera Slice Effect (scripted, bundled in Carrera Slice extension)
- Fast Grow Cut Segmenter (loadable, bundled in Carrera Slice extension)
- KUtil (scripted, bundled in Carrera Slice extension)
CBC_3D_I2MConversion
- Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
- Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
ChangeTracker
- Change Tracker (scripted, bundled in Change Tracker extension)
- Intensity Difference Metric (cli, bundled in Change Tracker extension)
CleaverExtension
- Cleaver CLI (cli, bundled in Cleaver Extension extension)
CMFreg
- Apply Matrix (cli, bundled in CMFreg extension)
- Compare Volumes (scripted, bundled in CMFreg extension)
- Downsize (cli, bundled in CMFreg extension)
- Growing (cli, bundled in CMFreg extension)
- Label Addition (cli, bundled in CMFreg extension)
- Label Extraction (cli, bundled in CMFreg extension)
- Landmark Registration (scripted, bundled in CMFreg extension)
- Mask Creation (cli, bundled in CMFreg extension)
- Non Growing (cli, bundled in CMFreg extension)
- Surface Registration (scripted, bundled in CMFreg extension)
CornerAnnotation
- Corner Annotation (scripted, bundled in Corner Annotation extension)
CurveMaker
- Curve Maker (scripted, bundled in Curve Maker extension)
DiceComputation
- Dice Computation (loadable, bundled in Dice Computation extension)
ErodeDilateLabel
- Dilate Label (cli, bundled in Erode Dilate Label extension)
- Erode Label (cli, bundled in Erode Dilate Label extension)
FastGrowCutEffect
- Fast Grow Cut (loadable, bundled in Fast Grow Cut Effect extension)
- Fast Grow Cut Effect (scripted, bundled in Fast Grow Cut Effect extension)
FinslerTractography
- Finsler Backtracing (cli, bundled in Finsler Tractography extension)
- Finsler Tractography (cli, bundled in Finsler Tractography extension)
GelDosimetryAnalysis
- Gel Dosimetry Analysis Algo (loadable, bundled in Gel Dosimetry Analysis extension)
GyroGuide
- Gyro Guide (scripted, bundled in Gyro Guide extension)
IASEM
- Binary Watershed Effect (scripted, bundled in IASEM extension)
- Bin Shrink (cli, bundled in IASEM extension)
- Double Threshold Effect (scripted, bundled in IASEM extension)
- IASEMImport (cli, bundled in IASEM extension)
- IASEMImport Series (cli, bundled in IASEM extension)
- Label Object Statistics (scripted, bundled in IASEM extension)
- Spacing Aware Curvature Diffusion (cli, bundled in IASEM extension)
iGyne
ImageMaker
- Image Maker (cli, bundled in Image Maker extension)
IntensitySegmenter
- Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
LAScarSegmenter
- LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
LongitudinalPETCT
- Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)
- PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
MABMIS
- IGR3D MABMIS Testing (cli, bundled in MABMIS extension)
- IGR3D MABMIS Training (cli, bundled in MABMIS extension)
MatlabBridge
- Matlab Commander (cli, bundled in Matlab Bridge extension)
- Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
MultidimData
- Metafile Importer (loadable, bundled in Multidim Data extension)
- Sequence Browser (loadable, bundled in Multidim Data extension)
- Sequences (loadable, bundled in Multidim Data extension)
NeedleFinder
- Needle Finder (scripted, bundled in Needle Finder extension)
PBNRR
PercutaneousApproachAnalysis
- Percutaneous Approach Analysis (scripted, bundled in Percutaneous Approach Analysis extension)
PerkTutor
- Perk Evaluator (loadable, bundled in Perk Tutor extension)
- Python Metrics Calculator (scripted, bundled in Perk Tutor extension)
- Transform Recorder (loadable, bundled in Perk Tutor extension)
- Workflow Segmentation (loadable, bundled in Perk Tutor extension)
PETDICOMExtension
- SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
PkModeling
- Pk Modeling (cli, bundled in Pk Modeling extension)
PortPlacement
- Port Placement (scripted, bundled in Port Placement extension)
PyDevRemoteDebug
- Py Dev Remote Debug (scripted, bundled in Py Dev Remote Debug extension)
Scoliosis
- Scoliosis Monitoring (scripted, bundled in Scoliosis extension)
- Spinal Curvature Measurement (scripted, bundled in Scoliosis extension)
SegmentationAidedRegistration
- Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
SlicerToKiwiExporter
- Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
SobolevSegmenter
- Sobolev Segmenter (cli, bundled in Sobolev Segmenter extension)
SwissSkullStripper
- Swiss Skull Stripper (cli, bundled in Swiss Skull Stripper extension)
TCIABrowser
- TCIABrowser (scripted, bundled in TCIABrowser extension)
ThingiverseBrowser
- Thingiverse Browser (scripted, bundled in Thingiverse Browser extension)
TrackerStabilizer
- Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)
WindowLevelEffect
- Window Level Effect (scripted, bundled in Window Level Effect extension)
XNATSlicer
- Xnat Slicer (scripted, bundled in XNATSlicer extension)
Extensions by name
45 extensions:
- ABC
- Airway Segmentation
- Carrera Slice
- CBC 3D I2MConversion
- Change Tracker
- Cleaver Extension
- CMFreg
- Corner Annotation
- Curve Maker
- Dice Computation
- Erode Dilate Label
- Fast Grow Cut Effect
- Finsler Tractography
- Gel Dosimetry Analysis
- Gyro Guide
- IASEM
- i Gyne
- Image Maker
- Intensity Segmenter
- LAScar Segmenter
- Longitudinal PETCT
- MABMIS
- Matlab Bridge
- Multidim Data
- Needle Finder
- PBNRR
- Percutaneous Approach Analysis
- Perk Tutor
- PETDICOMExtension
- Pk Modeling
- Port Placement
- Py Dev Remote Debug
- Reporting
- Resection Planner
- Scoliosis
- Segmentation Aided Registration
- Slicer To Kiwi Exporter
- Sobolev Segmenter
- Swiss Skull Stripper
- TCIABrowser
- Thingiverse Browser
- Tracker Stabilizer
- Volume Clip
- Window Level Effect
- XNATSlicer
Extensions by category
20 categories:
- Converters
- Developer Tools
- Editor Effects
- Exporter
- Filtering
- IGT
- Informatics
- Mesh Generation
- Microscopy
- Multidimensional data
- Quantification
- Radiotherapy
- Registration
- Remote
- Scoliosis
- Segmentation
- Tractography
- Training
- Utilities
- Wizards
Converters
Developer Tools
Editor Effects
Exporter
Filtering
Morphology
IGT
- Port Placement
- Gyro Guide
- Corner Annotation
- Percutaneous Approach Analysis
- Needle Finder
- Tracker Stabilizer
- i Gyne
- Resection Planner
Informatics
Mesh Generation
Microscopy
Multidimensional data
Quantification
Radiotherapy
Registration
Remote
Scoliosis
Segmentation
- Airway Segmentation
- Swiss Skull Stripper
- Carrera Slice
- LAScar Segmenter
- ABC
- Intensity Segmenter
- MABMIS
- Sobolev Segmenter
- Fast Grow Cut Effect
- Volume Clip
Tractography
Training
Utilities
Wizards
Extensions by contributing organization
54 contributing organizations:
- Asclepios INRIA) and Nikos Chrisochoides (CRTC
- Brigham and Women's Hospital
- BWH
- BWH & MGH
- BWH, SPL
- BWH/UAB
- College of Information Engineering, Zhejiang University of Technology, Hangzhou, China
- Crisalix
- CRTC
- Department of Neurosurgery, PLA General Hospital, Beijing, China
- Department of Orthodontics, UNC
- GE
- GE GLobal Research
- GT
- Isomics
- Kitware
- Moka Creative LLC, Washington University in St. Louis
- NIRAL, UNC
- Noware
- Perk Lab at Queen's University
- Perk Lab, Queen's
- Perk Lab, Queen's University
- PMH
- Queen's University
- Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto
- SBU
- SCI Institute
- Shiga University of Medical Science, Japan
- Shiga University of Medical Science, Japan, SPL
- SPL
- SPL and BWH
- SPL B&W Harvard
- SRI
- Stony Brook University
- Surgical Planning Lab
- UAB
- UNC
- Univ of Michigan
- University College Cork
- University of Bern
- University of Heidelberg
- University of Iowa
- University of Utah
- Utah
- UWA
- Washington University in St. Louis
Asclepios INRIA) and Nikos Chrisochoides (CRTC
Brigham and Women's Hospital
BWH
- Change Tracker
- Curve Maker
- Dice Computation
- Fast Grow Cut Effect
- Pk Modeling
- Segmentation Aided Registration
- Tracker Stabilizer
BWH & MGH
BWH, SPL
BWH/UAB
College of Information Engineering, Zhejiang University of Technology, Hangzhou, China
Crisalix
CRTC
Department of Neurosurgery, PLA General Hospital, Beijing, China
Department of Orthodontics, UNC
GE
GE GLobal Research
GT
Isomics
Kitware
Moka Creative LLC, Washington University in St. Louis
NIRAL, UNC
Noware
PerkLab at Queen's University
PerkLab, Queen's
PerkLab, Queen's University
PMH
Queen's University
Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto
SBU
SCI Institute
Shiga University of Medical Science, Japan
Shiga University of Medical Science, Japan, SPL
SPL
SPL and BWH
SPL B&W Harvard
SRI
Stony Brook University
Surgical Planning Lab
UAB
- Carrera Slice
- Fast Grow Cut Effect
- LAScar Segmenter
- Segmentation Aided Registration
- Sobolev Segmenter
UNC
Univ of Michigan
University College Cork
University of Bern
University of Heidelberg
University of Iowa
University of Utah
Utah
UWA
Washington University in St. Louis
Extensions by contributing individual
125 contributing individuals:
- Akila Viswanathan
- Alan Morris (Utah)
- Alex Yarmarkovich (Kitware))
- Alireza Mehrtash (SPL and BWH)
- Allen Tannenbaum (Stony Brook University)
- Andinet Enquobahrie (Kitware)
- Andras Lasso (PerkLab, Queen's University)
- Andre Mastmeyer
- Andrey Fedorov (SPL B&W Harvard)
- Andriy Fedorov (BWH)
- Andriy Kot (CRTC)
- Antonio Damato
- Antonio Tristan-Vega (Isomics)
- Arie Nakhmani (UAB)
- Arnaud Gelas (Crisalix)
- Atsushi Yamada (SUMS)
- Beatriz Paniagua (UNC)
- Bill Lorensen (Noware)
- Bradley Lowekamp (MSC/NLM)
- Brig Bagley (SCI Institute)
- Carl-Fredrik Westin
- Csaba Pinter (PerkLab, Queen's University)
- Dan Marcus (Washington University in St. Louis)
- Danny Perry (Utah)
- Demian Wasssermann
- Dinggang Shen (UNC)
- Ethan Ulrich (Univ. of Iowa)
- Fotis Drakopoulos (CRTC)
- Francois Budin (NIRAL, UNC)
- Franklin King (PerkLab, Queen's University)
- Greg Gardner (Utah)
- Guillaume Pernelle
- Ivan Kolesov (Stony Brook University)
- Jan Egger
- Jayender Jagadeesan (BWH)
- Jean-Christophe Fillion-Robin (Kitware)
- Jennifer Andrea (PerkLab, Queen's University)
- Jiashu Zhang (Department of Neurosurgery, PLA General Hospital, Beijing, China)
- Jim Miller (GE)
- Jonathan Bronson (SCI Institute)
- Josh Cates (Utah)
- Julien Finet (Kitware)
- Junichi Tokuda (BWH)
- Karl Fritscher (BWH & MGH)
- Kevin Wang (Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto)
- Kilian Pohl (UPenn)
- Koichiro Murakami (BWH, SUMS)
- Lauren Barber
- Laurent Chauvin (BWH)
- Liang-Jia Zhu (UAB)
- Liangjia Zhu (Stony Brook University)
- Luis G. Torres (UNC)
- Luping Fang (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
- Mahnaz Maddah (SRI)
- Manson Winsauer (UNC)
- Marcel Prastawa (University of Utah)
- Matt Lougheed (PerkLab, Queen's University)
- Mattea Welch (PerkLab, Queen's University)
- Matthew Holden (Queen's University)
- Matthew S. Holden (Queen's University)
- Mauricio Reyes (University of Bern)
- Ming-ching Chang (GE)
- Minjeong Kim (UNC)
- Nabgha Fahrat
- Nicole Aucoin (BWH)
- Nigel Goh (UWA)
- Nikos Chrisochoides (CRTC)
- Olivier Clatz (Asclepios INRIA) and Nikos Chrisochoides (CRTC)
- Pat Marion (Kitware)
- Patricio Vela (Georgia Institute of Technology)
- Paul Mercea (University of Heidelberg)
- Pengdong Xiao (Department of Orthodontics, UNC)
- Peter Black (BWH)
- Peter Karasev (Georgia Tech)
- Peter Savadjiev (Kitware))
- Pietro Nardelli (University College Cork)
- Qing Pan (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
- Rick Herrick (Washington University in St. Louis)
- Rob Mac Leod (Utah)
- Ron Kikinis (BWH)
- Ruifeng Chen (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
- S
- Sam Song
- Stefan Bauer (University of Bern)
- Steve Pieper (Isomics Inc.)
- Sunil Kumar (Moka Creative, LLC, kumar.sunil.p@gmail.com)
- Sylvain Bouix (BWH)
- Tamas Ungi (PerkLab, Queen's University)
- Thomas Fejes (University of Bern)
- Tina Kapur
- Tobias Penzkofer
- Vinicius Boen (Univ of Michigan)
- Xiaofeng Liu (GE GLobal Research)
- Xiaojun Chen
- Xiaolei Chen (Department of Neurosurgery, PLA General Hospital, Beijing, China)
- y Wells
- Yi Gao (BWH/UAB)
- Yingxuan Zhu (GE)
- Yixun Liu (CRTC)
Akila Viswanathan
Alan Morris
Alex Yarmarkovich
Alireza Mehrtash
Allen Tannenbaum
- Carrera Slice
- Fast Grow Cut Effect
- LAScar Segmenter
- Segmentation Aided Registration
- Sobolev Segmenter
Andinet Enquobahrie
Andras Lasso
Andre Mastmeyer
Andrey Fedorov
- CBC 3D I2MConversion
- Change Tracker
- Longitudinal PETCT
- PBNRR
- PETDICOMExtension
- Reporting
- TCIABrowser
- Window Level Effect
Andriy Fedorov
Andriy Kot
Antonio Damato
Antonio Tristan-Vega
Arie Nakhmani
Arnaud Gelas
Atsushi Yamada
Beatriz Paniagua
Bill Lorensen
Bradley Lowekamp
Brig Bagley
Carl-Fredrik Westin
Csaba Pinter
Dan Marcus
Danny Perry
Demian Wasssermann
Dinggang Shen
Ethan Ulrich
Fotis Drakopoulos
Francois Budin
Franklin King
Greg Gardner
Guillaume Pernelle
Ivan Kolesov
Jan Egger
Jayender Jagadeesan
Jean-Christophe Fillion-Robin
Jennifer Andrea
Jiashu Zhang
Jim Miller
Jonathan Bronson
Josh Cates
Julien Finet
Junichi Tokuda
Karl Fritscher
Kevin Wang
Kilian Pohl
Koichiro Murakami
Lauren Barber
Laurent Chauvin
Liang-Jia Zhu
Liangjia Zhu
Luis G. Torres
Luping Fang
Mahnaz Maddah
Manson Winsauer
Marcel Prastawa
Matt Lougheed
Mattea Welch
Matthew Holden
Matthew S. Holden
Mauricio Reyes
Ming-ching Chang
Minjeong Kim
Nabgha Fahrat
Nicole Aucoin
Nigel Goh
Nikos Chrisochoides
Olivier Clatz
Pat Marion
Patricio Vela
Paul Mercea
Pengdong Xiao
Peter Black
Peter Karasev
Peter Savadjiev
Pietro Nardelli
Qing Pan
Rick Herrick
Rob MacLeod
Ron Kikinis
Ruifeng Chen
S
Sam Song
Stefan Bauer
Steve Pieper
Sunil Kumar
Sylvain Bouix
Tamas Ungi
Thomas Fejes
Tina Kapur
Tobias Penzkofer
Vinicius Boen
Xiaofeng Liu
Xiaojun Chen
Xiaolei Chen
y Wells
Yi Gao
- Carrera Slice
- Fast Grow Cut Effect
- i Gyne
- LAScar Segmenter
- Needle Finder
- Segmentation Aided Registration
