Difference between revisions of "Slicer3: Image Guided Therapy (IGT)"

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Provided by NA-MIC and the Surgical Planning Lab:
 
Provided by NA-MIC and the Surgical Planning Lab:
 
* [http://www.slicer.org/pages/Downloads 3D Slicer]
 
* [http://www.slicer.org/pages/Downloads 3D Slicer]
* 3D Slicer LEGO tutorial module (available at [http://www.na-mic.org/ViewVC/index.cgi/trunk/LegoTutorial/?root=NAMICSandBox NA-MIC SandBox Subversion Repositiory]) (download [http://wiki.na-mic.org/Wiki/images/6/69/000003.SER.zip 000003.SER.zip])
+
* 3D Slicer LEGO tutorial module (available at [http://www.na-mic.org/ViewVC/index.cgi/trunk/LegoTutorial/?root=NAMICSandBox NA-MIC SandBox Subversion Repositiory])  
* CT volume of the phantom
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* CT volume of the phantom (download [http://wiki.na-mic.org/Wiki/images/6/69/000003.SER.zip 000003.SER.zip])
 
* Tutorial slides
 
* Tutorial slides
 
* Assembly instructions for the robot and the phantom
 
* Assembly instructions for the robot and the phantom

Revision as of 15:26, 25 November 2008

Home < Slicer3: Image Guided Therapy (IGT)

Introduction

The Slicer3 IGT tools are intended to enable research in image guided therapy. They leverage the Slicer environment and augment it with a number of IGT specific functionalities and modules. One key element of this capability is Open IGT link, a communication protocol to link 3D Slicer to a variety of devices.


Use-case scenario 1: Neurosurgical navigation

  • I am a neurosurgeon who is using the BrainLabs Navigation system. I would like to use Slicer to do some research in DTI visualization during procedures. What do I do?

The following scenario is being developed and tested: The integration of BrainLab and Slicer3


Use-case scenario 2: IGT robotics tutorial with LEGO Mindstorms

  • I am a professor who wants to use Slicer to educate my students about the basics of robotics in IGT

Materials

Provided by NA-MIC and the Surgical Planning Lab:

Provided by tutorial participants:

  • 1 LEGO Mindstorms NXT kit (Available at LEGO Shop)
  • 1 LEGO Deluxe Brick box (Available at LEGO Shop)
  • 2 pom-poms
  • Linux computer with root access or Windows with administrator privileges

(For purchasing information for user-supplied materials, see the "Tutorial Slides Part 1 - Background and Materials" slides.)

Steps

STEP 1: Assemble Robot (See Robot assembly instruction)

STEP 2: Assemble Phantom (See Phantom assembly instruction)

STEP 3: Place phantom (See Phantom assembly instruction)

For more information, please refer the tutorial slide materials listed bellow.

References

  • 3D Slicer LEGO tutorial module (including code to interface between a LEGO robot and a C++ program): Available on the NA-MIC Sandbox - access online or through the NA-MIC subversion system



List of devices that have been linked successfully

  • Support medical tracking systems
  • All devices interfaced to IGSTK (Noby inserts link), including
    • Flashpoint (Image Guided Technologies, Boulder, CO)
    • Robin Medical
    • scanners (Noby: which ones)
    • robots (Noby which ones)
  • IGT Modules in Slicer 3.3

Only what is in Slicer 3.3 nightly!