Difference between revisions of "Slicer3:Mori-Atlas labels"
Line 114: | Line 114: | ||
| PCT_Pontine_crossing_tract_(a_part_of_MCP) | | PCT_Pontine_crossing_tract_(a_part_of_MCP) | ||
| style="background:violet"| violet | | style="background:violet"| violet | ||
− | | | + | |- |
− | + | | 3 | |
− | + | | GCC_Genu_of_corpus_callosum | |
− | 4 BCC_Body_of_corpus_callosum | + | | style="background:lightpink"| lightpink |
− | 5 SCC_Splenium_of_corpus_callosum | + | |- |
+ | | 4 | ||
+ | | BCC_Body_of_corpus_callosum | ||
+ | | style="background:pink"| pink | ||
+ | |- | ||
+ | | 5 | ||
+ | | SCC_Splenium_of_corpus_callosum | ||
+ | | style="background:deeppink"| deeppink | ||
+ | |- | ||
+ | | | ||
6 FX_Fornix_(column_and_body_of_fornix) | 6 FX_Fornix_(column_and_body_of_fornix) | ||
7 CST-R_Corticospinal_tract_right | 7 CST-R_Corticospinal_tract_right | ||
Line 164: | Line 173: | ||
49 TAP-R_Tapatum_right | 49 TAP-R_Tapatum_right | ||
50 TAP-L_Tapatum_left | 50 TAP-L_Tapatum_left | ||
+ | |} |
Revision as of 12:17, 21 April 2010
Home < Slicer3:Mori-Atlas labelsBack to LUTs and Ontologies
- Standard color names and values: http://www.w3.org/TR/SVG/types.html#ColorKeywords
- Go here to create a text file in Slicer LUT format.
- List
2010 Brain LUT for Slicer general applications
integer_label | text_label | color | notes |
---|---|---|---|
0 | Background | rgba(0,0,0,0) | black |
1 | Bone | rgb(240,255,240) | honeydew |
2 | Skin | rgb(233, 150, 122) | darksalmon |
3 | Muscles | rgb(205,92,92) | indianred |
4 | Fat | rgb(238,232,170) | palegoldenrod |
5 | CSF | rgb(0,191,255) | deepskyblue |
6 | Ventricles | rgb(65,105,225) | royalblue |
7 | Arteries | rgb(250,128,114) | salmon |
8 | Veins | rgb(70,130,180) | steelblue |
9 | Gray matter | rgb(211,211,211) | lightgrey |
10 | White matter | rgb(255,255,240) | ivory |
11 | Tumor | rgb(144,238,144) | lightgreen |
12 | Edema | rgb(224,255,255) | lightcyan |
13 | Necrosis | rgb(216,191,216) | thistle |
14 | Structure 1 | rgb(238,130,238) | violet |
15 | Structure 2 | rgb(255,215,0) | gold |
Look-up Table for the Mori WM Atlas labels
Work in progress.
integer_label | text_label | color |
---|---|---|
0 | Background | rgba(0,0,0,0) |
1 | MCP_Middle_cerebellar_peduncle | gold |
2 | PCT_Pontine_crossing_tract_(a_part_of_MCP) | violet |
3 | GCC_Genu_of_corpus_callosum | lightpink |
4 | BCC_Body_of_corpus_callosum | pink |
5 | SCC_Splenium_of_corpus_callosum | deeppink |
6 FX_Fornix_(column_and_body_of_fornix) 7 CST-R_Corticospinal_tract_right 8 CST-L_Corticospinal_tract_left 9 ML-R_Medial_lemniscus_right 10 ML-L_Medial_lemniscus_left 11 ICP-R_Inferior_cerebellar_peduncle_right 12 ICP-L_Inferior_cerebellar_peduncle_left 13 SCP-R_Superior_cerebellar_peduncle_right 14 SCP-L_Superior_cerebellar_peduncle_left 15 CP-R_Cerebral_peduncle_right 16 CP-L_Cerebral_peduncle_left 17 ALIC-R_Anterior_limb_of_internal_capsule_right 18 ALIC-L_Anterior_limb_of_internal_capsule_left 19 PLIC-R_Posterior_limb_of_internal_capsule_right 20 PLIC-L_Posterior_limb_of_internal_capsule_left 21 RLIC-R_Retrolenticular_part_of_internal_capsule_right 22 RLIC-L_Retrolenticular_part_of_internal_capsule_left 23 ACR-R_Anterior_corona_radiata_right 24 ACR-L_Anterior_corona_radiata_left 25 SCR-R_Superior_corona_radiata_right 26 SCR-L_Superior_corona_radiata_left 27 PCR-R_Posterior_corona_radiata_right 28 PCR-L_Posterior_corona_radiata_left 29 PTR-R_Posterior_thalamic_radiation_(include_optic_radiation)_right 30 PTR-L_Posterior_thalamic_radiation_(include_optic_radiation)_left 31 SS-R_Sagittal_stratum_(include_inferior_longitidinal_fasciculus_and_inferior_fronto-occipital_fasciculus)_right 32 SS-L_Sagittal_stratum_(include_inferior_longitidinal_fasciculus_and_inferior_fronto-occipital_fasciculus)_left 33 EC-R_External_capsule_right 34 EC-L_External_capsule_left 35 CGC-R_Cingulum_(cingulate_gyrus)_right 36 CGC-L_Cingulum_(cingulate_gyrus)_left 37 CGH-R_Cingulum_(hippocampus)_right 38 CGH-L_Cingulum_(hippocampus)_left 39 FX-R_Fornix_Stria_terminalis_right 40 FX-L_Fornix_Stria_terminalis_left 41 SLF-R_Superior_longitudinal_fasciculus_right 42 SLF-L_Superior_longitudinal_fasciculus_left 43 SFO-R_Superior_fronto-occipital_fasciculus_right 44 SFO-R_Superior_fronto-occipital_fasciculus_left 45 IFO-R_Inferior_fronto-occipital_fasciculus_right 46 IFO-L_Inferior_fronto-occipital_fasciculus_left 47 UNC-R_Uncinate_fasciculus_right 48 UNC-L_Uncinate_fasciculus_left 49 TAP-R_Tapatum_right 50 TAP-L_Tapatum_left |