Difference between revisions of "Modules:StochasticTractography-Documentation-3.4"

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* '''Brain Mask panel:'''
 
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* '''Diffusion Tensor panel:'''
 
* '''Diffusion Tensor panel:'''
 
* '''Tractography panel:'''
 
* '''Tractography panel:'''

Revision as of 16:01, 14 April 2009

Home < Modules:StochasticTractography-Documentation-3.4
Return to Slicer 3.4 Documentation

Module Name

Stochastic Tractography

Corpus callosum with stochastic tractography
Corpus callosum lateral projections

General Information

Module Type & Category

Type: Interactive

Category: DTI

Authors, Collaborators & Contact

  • Author: Julien von Siebenthal
  • Contributor: Steve Pieper
  • Contact: jvs@bwh.harvard.edu

Module Description

As a main purpose, the stochastic tractography module helps to evaluate connectivity between two regions of the Grey Matter of the brain. It obviously possible to find from a single region of interest (ROI) specific fiber tracts.

Usage

Examples, Use Cases & Tutorials

Allapplication scaled02.png

Quick Tour of Features and Use

List all the panels in your interface, their features, what they mean, and how to use them. For instance:

  • IO panel:

IOmenu.png

  • Smoothing panel:

Smoothmenu.png

  • Brain Mask panel:

Maskmenu.png

  • Diffusion Tensor panel:
  • Tractography panel:
  • Connectivity Map panel:

Development

Dependencies

Volumes

Known bugs

Follow this link to the Slicer3 bug tracker.


Usability issues

Follow this link to the Slicer3 bug tracker. Please select the usability issue category when browsing or contributing.

Source code & documentation

More Information

Acknowledgment

National Alliance for Medical Image Computing (NAMIC), funded by the National Institutes of Health through the NIH Roadmap for Medical Research, Grant U54 EB005149 (to Ron Kikinis, Marek Kubicki).

References