Modules:CMTK

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General Information

Module Type & Category

Type: CLI

Category: Registration, Segmentation, Artifact Correction

Authors, Collaborators & Contact

• Torsten Rohlfing, torsten@synapse.sri.com (primary contact)
• Michael P. Hasak

With contributions from:

• Martin H. Rademacher
• Calvin R. Maurer, Jr.
• Daniel B. Russakoff

Module Description

CMTK is a collection of command line software tools for:

• image registration: affine and nonrigid, pairwise and groupwise, single-channel and multi-channel
• segmentation: atlas-based, levelset-like
• artifact correction: intensity bias field, motion

Development

Dependencies

None.

Known bugs

Follow this link to the bug tracker at NITRC.

Source code & documentation

Source code and API documentation are available at NITRC.

The CMTK User Guide can also be downloaded from the Insight Journal.

More Information

Acknowledgment

Supported by NIH-NIBIB R01 EB008381

References

A list of papers describing the algorithms implemented in CMTK is available here.

Papers using CMTK tools are listed here.