Difference between revisions of "GtractCostFastMarching"
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Latest revision as of 13:16, 27 November 2019
Home < GtractCostFastMarchingModule Type & Category
Type: CLI
Category: Diffusion.GTRACT
Authors, Collaborators & Contact
Author: This tool was developed by Vincent Magnotta and Greg Harris. The original code here was developed by Daisy Espino.
Contributors: Funding for this version of the GTRACT program was provided by NIH/NINDS R01NS050568-01A2S1
Module Description
| Program title | Cost Fast Marching |
| Program version | 4.0.0 |
| Program documentation-url | - |
- Input Image Files Parameters for specifying the diffusion tensor image set
- Input Tensor Image Volume [--inputTensorVolume] : Required: input tensor image file name
- Input Anisotropy Image Volume [--inputAnisotropyVolume] : Required: input anisotropy image file name
- Input Starting Seeds LabelMap Volume [--inputStartingSeedsLabelMapVolume] : Required: input starting seeds LabelMap image file name
- Starting Seeds Label [--startingSeedsLabel] : Label value for Starting Seeds
- Output Files Output files generated by the fast marching vcl_cost function
- Output Cost Image [--outputCostVolume] : Output vcl_cost image
- Output Speed Image [--outputSpeedVolume] : Output speed image
- Fast Marching Tracking Parameters Input parameters controlling the Fast Marching Cost Function
- Anisotropy Weight [--anisotropyWeight] : Anisotropy weight used for vcl_cost function calculations
- Stopping Value [--stoppingValue] : Terminiating value for vcl_cost function estimation
- Seed Threshold [--seedThreshold] : Anisotropy threshold used for seed selection
