https://www.slicer.org/w/index.php?title=Documentation/Nightly/Modules/PathExplorer&feed=atom&action=history
Documentation/Nightly/Modules/PathExplorer - Revision history
2024-03-29T04:37:23Z
Revision history for this page on the wiki
MediaWiki 1.33.0
https://www.slicer.org/w/index.php?title=Documentation/Nightly/Modules/PathExplorer&diff=37544&oldid=prev
Lchauvin at 18:42, 28 March 2014
2014-03-28T18:42:55Z
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<td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 18:42, 28 March 2014</td>
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<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><!-- ---------------------------- --></div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><!-- ---------------------------- --></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>{{documentation/{{documentation/version}}/module-section|Module Description}}</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>{{documentation/{{documentation/version}}/module-section|Module Description}}</div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>{{documentation/modulename}} is a Slicer4 module designed to facilitate the creation of trajectory. User is able to place some target points and entry points, represented respectively by green and blue fiducials. When one target point and one entry point are selected, user can create a path that connects these two points, using a slicer ruler.</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>{{documentation/modulename}} is a Slicer4 module<ins class="diffchange diffchange-inline">, part of the SlicerIGT extension, </ins>designed to facilitate the creation of trajectory. User is able to place some target points and entry points, represented respectively by green and blue fiducials. When one target point and one entry point are selected, user can create a path that connects these two points, using a slicer ruler.</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Points (target and entry) could be moved in real-time, using a drag-and-drop on the fiducial, or by specifying coordinates in the entry of the table corresponding to the point to move.</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Points (target and entry) could be moved in real-time, using a drag-and-drop on the fiducial, or by specifying coordinates in the entry of the table corresponding to the point to move.</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Selecting a trajectory in the list will automatically select in the target and entry tables the corresponding fiducials. Trajectory could be changed at this time by selecting a new target or entry point, and clicking on "Update" button.</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Selecting a trajectory in the list will automatically select in the target and entry tables the corresponding fiducials. Trajectory could be changed at this time by selecting a new target or entry point, and clicking on "Update" button.</div></td></tr>
</table>
Lchauvin
https://www.slicer.org/w/index.php?title=Documentation/Nightly/Modules/PathExplorer&diff=37543&oldid=prev
Lchauvin at 18:14, 28 March 2014
2014-03-28T18:14:06Z
<p></p>
<table class="diff diff-contentalign-left" data-mw="interface">
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<td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td>
<td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 18:14, 28 March 2014</td>
</tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l10" >Line 10:</td>
<td colspan="2" class="diff-lineno">Line 10:</td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>This work is supported by NA-MIC, NCIGT, and the Slicer Community.<br></div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>This work is supported by NA-MIC, NCIGT, and the Slicer Community.<br></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Author: Laurent Chauvin<br></div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Author: Laurent Chauvin<br></div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>Contact: <del class="diffchange diffchange-inline">Laurent Chauvin </del><email> lchauvin@bwh.harvard.edu</email> <br></div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>Contact: <email> lchauvin@bwh.harvard.edu</email> <br></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Contributors: Junichi Tokuda, Atsushi Yamada<br></div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Contributors: Junichi Tokuda, Atsushi Yamada<br></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>{{documentation/{{documentation/version}}/module-introduction-row}}</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>{{documentation/{{documentation/version}}/module-introduction-row}}</div></td></tr>
</table>
Lchauvin
https://www.slicer.org/w/index.php?title=Documentation/Nightly/Modules/PathExplorer&diff=37542&oldid=prev
Lchauvin at 18:13, 28 March 2014
2014-03-28T18:13:45Z
<p></p>
<table class="diff diff-contentalign-left" data-mw="interface">
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<col class="diff-marker" />
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<td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td>
<td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 18:13, 28 March 2014</td>
</tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l10" >Line 10:</td>
<td colspan="2" class="diff-lineno">Line 10:</td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>This work is supported by NA-MIC, NCIGT, and the Slicer Community.<br></div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>This work is supported by NA-MIC, NCIGT, and the Slicer Community.<br></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Author: Laurent Chauvin<br></div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Author: Laurent Chauvin<br></div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del style="font-weight: bold; text-decoration: none;">Contributors: Junichi Tokuda, Atsushi Yamada</del></div></td><td colspan="2"> </td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Contact: Laurent Chauvin <email> lchauvin@bwh.harvard.edu</email> <br></div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Contact: Laurent Chauvin <email> lchauvin@bwh.harvard.edu</email> <br></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">Contributors: Junichi Tokuda, Atsushi Yamada<br></ins></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>{{documentation/{{documentation/version}}/module-introduction-row}}</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>{{documentation/{{documentation/version}}/module-introduction-row}}</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>{{documentation/{{documentation/version}}/module-introduction-logo-gallery</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>{{documentation/{{documentation/version}}/module-introduction-logo-gallery</div></td></tr>
</table>
Lchauvin
https://www.slicer.org/w/index.php?title=Documentation/Nightly/Modules/PathExplorer&diff=37541&oldid=prev
Lchauvin at 18:13, 28 March 2014
2014-03-28T18:13:24Z
<p></p>
<table class="diff diff-contentalign-left" data-mw="interface">
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<td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td>
<td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 18:13, 28 March 2014</td>
</tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l9" >Line 9:</td>
<td colspan="2" class="diff-lineno">Line 9:</td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>{{documentation/{{documentation/version}}/module-introduction-row}}</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>{{documentation/{{documentation/version}}/module-introduction-row}}</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>This work is supported by NA-MIC, NCIGT, and the Slicer Community.<br></div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>This work is supported by NA-MIC, NCIGT, and the Slicer Community.<br></div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>Author: Laurent Chauvin, Atsushi Yamada<del class="diffchange diffchange-inline">, Nobuhiko Hata<br></del></div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>Author: Laurent Chauvin<ins class="diffchange diffchange-inline"><br></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins class="diffchange diffchange-inline">Contributors: Junichi Tokuda</ins>, Atsushi Yamada</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Contact: Laurent Chauvin <email> lchauvin@bwh.harvard.edu</email> <br></div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Contact: Laurent Chauvin <email> lchauvin@bwh.harvard.edu</email> <br></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>{{documentation/{{documentation/version}}/module-introduction-row}}</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>{{documentation/{{documentation/version}}/module-introduction-row}}</div></td></tr>
</table>
Lchauvin
https://www.slicer.org/w/index.php?title=Documentation/Nightly/Modules/PathExplorer&diff=36927&oldid=prev
Lchauvin: Created page with '<noinclude>{{documentation/versioncheck}}</noinclude> <!-- ---------------------------- --> {{documentation/{{documentation/version}}/module-header}} <!-- -----------------------…'
2014-01-08T18:21:26Z
<p>Created page with '<noinclude>{{documentation/versioncheck}}</noinclude> <!-- ---------------------------- --> {{documentation/{{documentation/version}}/module-header}} <!-- -----------------------…'</p>
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This work is supported by NA-MIC, NCIGT, and the Slicer Community.<br><br />
Author: Laurent Chauvin, Atsushi Yamada, Nobuhiko Hata<br><br />
Contact: Laurent Chauvin <email> lchauvin@bwh.harvard.edu</email> <br><br />
{{documentation/{{documentation/version}}/module-introduction-row}}<br />
{{documentation/{{documentation/version}}/module-introduction-logo-gallery<br />
|{{collaborator|logo|namic}}|NA-MIC<br />
|{{collaborator|logo|ncigt}}|NCIGT<br />
|{{collaborator|logo|spl}}|SPL<br />
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This project is supported by National Institute of Health (5P01CA067165, 5R01CA124377, 5R01CA138586, 2R44DE019322, 7R01CA124377, 5R42CA137886, 8P41EB015898).<br />
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{{documentation/{{documentation/version}}/module-section|Module Description}}<br />
{{documentation/modulename}} is a Slicer4 module designed to facilitate the creation of trajectory. User is able to place some target points and entry points, represented respectively by green and blue fiducials. When one target point and one entry point are selected, user can create a path that connects these two points, using a slicer ruler.<br />
Points (target and entry) could be moved in real-time, using a drag-and-drop on the fiducial, or by specifying coordinates in the entry of the table corresponding to the point to move.<br />
Selecting a trajectory in the list will automatically select in the target and entry tables the corresponding fiducials. Trajectory could be changed at this time by selecting a new target or entry point, and clicking on "Update" button.<br />
<br />
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{{documentation/{{documentation/version}}/module-section|Use Cases}}<br />
{{documentation/modulename}} is an interesting tool for needle insertion planning. By defining targets, and entry points, we could evaluate distance between both points, visualize the regions the needle will go through to reach the target. It is also possible to easily evaluate several entry points for a given target to find the most suitable.<br />
{{documentation/modulename}} is interesting in the fact that it allows the user to reslice along the trajectory line, or perpendicular to the line. In the first case, slice plane rotate around the trajectory, in the second case, slice plane is centered on the trajectory and can 'travel' along the line. Use cases of this feature are needle insertion planning for example, to visualize path of the needle and ensure no important structures will be damaged.<br />
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{|<br />
|[[Image:PathXplorer_Planning.png|thumb|400px|{{documentation/modulename}} Planning Panel ]]<br />
|[[Image:PathXplorer_PathCreation.png|thumb|470px|{{documentation/modulename}} Path Creation Panel ]]<br />
|[[Image:PathXplorer_Visualization.png|thumb|470px|{{documentation/modulename}} Visualization Panel ]]<br />
|}<br />
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* Planning Panel<br />
**# Target table<br />
**#* "+" button allows the user to place a new target point by clicking at desired location on 2D or 3D viewers.<br />
**#* "-" button remove the selected line<br />
**#* "Clear" button remove all points in the table<br />
**# Entry table<br />
**#* Same as target table, for entry points<br />
* Path Creation Panel<br />
** Select a target and an entry point<br />
** Click "+" in Path Visualization panel to create a new trajectory<br />
* Visualization Panel<br />
** Select a trajectory<br />
** Click on "Red" to reslice Red viewer with selected trajectory (same for Green and Yellow)<br />
** Text of the button represent the current trajectory reslicing corresponding viewer (e.g. E1T1 reslicing red viewer, E1T2 reslicing yellow viewer, no reslicing for green viewer)<br />
** When selecting a new trajectory previous reslicing values are automatically reloaded<br />
** Choose perpendicular to reslice perpendicular to trajectory, In plane to reslice along the trajectory<br />
** If reslicing perpendicularly, "Distance" value represent distance of the reslicing plane from entry point<br />
** If reslicing in plane, "Angle" represent the angle value of the slice plane from original orientation<br />
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Lchauvin