Difference between revisions of "Documentation/Nightly/Modules/DataProbe"

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Information on NA-MIC can be obtained from the [http://www.na-mic.org/ NA-MIC website].<br>
 
Information on NA-MIC can be obtained from the [http://www.na-mic.org/ NA-MIC website].<br>
Author: Steve Pieper, Isomics, Inc.<br>
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Display information about the volume data at the location of the mouse pointer in the Slice views.
 
Display information about the volume data at the location of the mouse pointer in the Slice views.
  
[[image:Workspace 1 155.png|Sample Data Module]]
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[[Image:Slice view annotations gallery.PNG|Sample Data Module]]
  
 
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Revision as of 20:42, 17 November 2014

Home < Documentation < Nightly < Modules < DataProbe


For the latest Slicer documentation, visit the read-the-docs.


Introduction and Acknowledgements

Information on NA-MIC can be obtained from the NA-MIC website.
Author(s)/Contributor(s): Steve Pieper (Isomics Inc.) and Alireza Mehrtash (BWH).
Contact: Steve Pieper, <email>pieper@bwh.harvard.edu</email>

Isomics, Inc.  
NA-MIC  
Quantitative Image Informatics for Cancer Research  

Module Description

Display information about the volume data at the location of the mouse pointer in the Slice views.

Sample Data Module

Use Cases

Examples:

  • Use Case 1: Compare image intensity for two volumes before and after filtering by putting one in the foreground and one in the background.
  • Use Case 2: Get a textual description of the label value of a segmented structure.
  • Use Case 3: Determine the patient and voxel coordinates of a structure.

Tutorials

Panels and their use

The Data probe shows two blocks of data

  • The first line displays:
    • color and name of the Slice view that the mouse pointer is currently over
    • the patient-space location corresponding to the mouse pointer in RAS (Right/Anterior/Superior space - see the page on Coordinate Systems for more information)
    • the orientation of the slice view
    • the spacing between slices for the slice view
  • The lower block of three lines displays:
    • L, F, or B for Label, Foreground, and Background respectively
    • the name of the volume (or None if nothing is selected)
    • the IJK coordinates corresponding to the mouse pointer (see the page on Coordinate Systems for more information)
    • or Label volumes, the name corresponding to the label value (as defined by the current color table)
    • the value of the volume at that coordinate (a single value for scalar volumes or the number or components for non-scalar volumes)

Similar Modules

Label Statistics

References

N/A

Information for Developers

This module is written in python.