Difference between revisions of "Documentation/Nightly/ModuleExtensionListing"

From Slicer Wiki
Jump to: navigation, search
(This page has been updated using script slicer_wiki_extension_module_listing.py (rev ee4b87b). For more details: * https://github.com/Slicer/slicer-wiki-scripts * http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Developers/Build_sy...)
(This page has been updated using script slicer_wiki_extension_module_listing.py (rev ee4b87b). For more details: * https://github.com/Slicer/slicer-wiki-scripts * http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Developers/Build_sy...)
Line 96: Line 96:
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Isolated Connected Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Isolated Connected Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 +
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit LASegmentation Graph Cuts]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/Nightly/Modules/ScarVisualization|Scar Visualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/Nightly/Modules/ScarVisualization|Scar Visualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit LASegmentation Graph Cuts]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
 
<span id='Modules_by_category_Chest_Imaging_Platform'></span>
 
<span id='Modules_by_category_Chest_Imaging_Platform'></span>
 
== Chest Imaging Platform ==
 
== Chest Imaging Platform ==
Line 175: Line 175:
 
* [http://www.chestimagingplatform.org Generate Partial Lung Label Map]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 
* [http://www.chestimagingplatform.org Generate Partial Lung Label Map]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 
* [http://www.chestimagingplatform.org Split Left Lung Right Lung]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 
* [http://www.chestimagingplatform.org Split Left Lung Right Lung]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 +
* [http://www.chestimagingplatform.org Generate Binary Thinning3D]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 
* [http://www.chestimagingplatform.org Generate Lesion Segmentation]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 
* [http://www.chestimagingplatform.org Generate Lesion Segmentation]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
* [http://www.chestimagingplatform.org Generate Binary Thinning3D]    <small>(cli, bundled in [http://www.chestimagingplatform.org Chest Imaging Platform] extension)</small>
 
 
<span id='Modules_by_category_Toolkit_Utils'></span>
 
<span id='Modules_by_category_Toolkit_Utils'></span>
 
==== Utils ====
 
==== Utils ====
Line 231: Line 231:
 
* DICOMScalar Volume Plugin
 
* DICOMScalar Volume Plugin
 
* [[Documentation/Nightly/Modules/DICOMRWVMPlugin|DICOMRWVMPlugin]]
 
* [[Documentation/Nightly/Modules/DICOMRWVMPlugin|DICOMRWVMPlugin]]
 +
* Multi Volume Importer Plugin
 
* Dicom Rt Import Export Plugin
 
* Dicom Rt Import Export Plugin
* Multi Volume Importer Plugin
 
 
<span id='Modules_by_category_Developer_Tools_Editor_Extensions'></span>
 
<span id='Modules_by_category_Developer_Tools_Editor_Extensions'></span>
 
=== Editor Extensions ===
 
=== Editor Extensions ===
Line 330: Line 330:
 
* [https://github.com/SlicerIGT/LumpNav Viewpoint]    <small>(scripted, bundled in [https://github.com/SlicerIGT/LumpNav Lump Nav] extension)</small>
 
* [https://github.com/SlicerIGT/LumpNav Viewpoint]    <small>(scripted, bundled in [https://github.com/SlicerIGT/LumpNav Lump Nav] extension)</small>
 
* [[Documentation/Nightly/Modules/CollectFiducials|Collect Fiducials]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Modules/CollectFiducials|Collect Fiducials]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 +
* [[Documentation/Nightly/Modules/PlusRemote|Plus Remote]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [https://github.com/SlicerIGT/LumpNav Lump Nav]    <small>(scripted, bundled in [https://github.com/SlicerIGT/LumpNav Lump Nav] extension)</small>
 
* [https://github.com/SlicerIGT/LumpNav Lump Nav]    <small>(scripted, bundled in [https://github.com/SlicerIGT/LumpNav Lump Nav] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Transform Fusion]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Transform Fusion]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
Line 350: Line 351:
 
* [[Documentation/Nightly/Modules/OpenIGTLinkIF|Open IGTLink IF]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Modules/OpenIGTLinkIF|Open IGTLink IF]]    <small>(loadable, built-in)</small>
 
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/Nightly/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/iGyne|i Gyne]] extension)</small>
* [[Documentation/Nightly/Modules/PlusRemote|Plus Remote]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Fiducials To Model Registration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Fiducials To Model Registration]]    <small>(scripted, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Markups To Model]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/Nightly/Extensions/SlicerIGT|Markups To Model]]    <small>(loadable, bundled in [[Documentation/Nightly/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
Line 542: Line 542:
 
<span id='Modules_by_category_CMF_Registration_Voxelbase_Registration'></span>
 
<span id='Modules_by_category_CMF_Registration_Voxelbase_Registration'></span>
 
==== Voxelbase Registration ====
 
==== Voxelbase Registration ====
 +
* [[Documentation/Nightly/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
* [[Documentation/Nightly/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
 
* [[Documentation/Nightly/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/Nightly/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/Nightly/Extensions/CMFreg|CMFreg]] extension)</small>
 
<span id='Modules_by_category_Slicelets'></span>
 
<span id='Modules_by_category_Slicelets'></span>
Line 606: Line 606:
 
* Tables Self Test
 
* Tables Self Test
 
* Markups In Views Self Test
 
* Markups In Views Self Test
 +
* Two CLIs In Parallel Test
 
* Subject Hierarchy Core Plugins Self Test
 
* Subject Hierarchy Core Plugins Self Test
 
* Subject Hierarchy Generic Self Test
 
* Subject Hierarchy Generic Self Test
Line 613: Line 614:
 
* RSNA2012Prostate Demo
 
* RSNA2012Prostate Demo
 
* DTINot Reproducible Issue3977
 
* DTINot Reproducible Issue3977
 +
* Two CLIs In ARow Test
 
* Colors Scalar Bar Self Test
 
* Colors Scalar Bar Self Test
 
* View Controllers Slice Interpolation Bug1926
 
* View Controllers Slice Interpolation Bug1926

Revision as of 20:43, 7 January 2016

Home < Documentation < Nightly < ModuleExtensionListing


Modules by category

38 categories:

Cardiac

Cardiac MRI Toolkit

Chest Imaging Platform

Modules

Toolkit

Particles

Processing

Quantification

Registration

Segmentation

Utils

CIP

Converters

Developer Tools

DICOM Plugins

  • Dicom Ultrasound Plugin
  • DICOMSegmentation Plugin
  • DICOMSlicer Data Bundle Plugin
  • DICOMPETSUVPlugin
  • DICOMDiffusion Volume Plugin
  • DICOMLongitudinal PETCTPlugin
  • Dicom Sro Import Plugin
  • DICOMScalar Volume Plugin
  • DICOMRWVMPlugin
  • Multi Volume Importer Plugin
  • Dicom Rt Import Export Plugin

Editor Extensions

Matlab

Diffusion

Diffusion Data Conversion

  • DWIConvert (cli, built-in)

Diffusion Tensor Images

Diffusion Weighted Images

FiberAnalysis

  • Fiber Post Process (cli, built-in)

Tractography

Editor Effects

EditorEffect

Endoscopy

Examples

Exporter

Filter

  • Island Removal (cli, built-in)

Filtering

Arithmetic

Denoising

Morphology

IGT

Informatics

Converters

Legacy

Converters

Diffusion

Denoising

Diffusion Data Conversion

  • DTIexport (cli, built-in)
  • DTIimport (cli, built-in)

Filtering

Registration

Work in Progress

Diffusion Tensor

Test
  • Diffusion Tensor Test (cli, built-in)

Margin Calculator

Mesh Generation

MeshGeneration

Microscopy

MultiVolume Support

Perk Tutor

Plastimatch

Registration

Utilities

Quantification

ChangeQuantification

Radiotherapy

Registration

Label Registration

Specialized

Segmentation

Specialized

Sequences

Shape Analysis

CMF Registration

Voxelbase Registration

Slicelets

Surface Models

TestCases

  • SEGExporter Self Test

Testing

  • CLI4Test
  • Threshold Threading Test
  • Scoliosis Monitoring (scripted, bundled in Scoliosis extension)
  • Slicer MRBSave Restore Check Paths Test
  • CLIROITest (cli, built-in)
  • Performance Tests
  • Slicer MRBMultiple Save Restore Test
  • Slicer MRBTest
  • SEGExporter Self Test
  • Self Tests
  • Slicer MRBMultiple Save Restore Loop Test

IGT Tests

  • Breach Warning Self Test
  • Watchdog Self Test

SlicerRT Tests

TestCases

  • Atlas Tests
  • Add Storable Data After Scene View Test
  • test tractography display
  • RSNAQuant Tutorial
  • Neurosurgical Planning Tutorial Markups Self Test
  • Change Tracker Self Test
  • Fiducial Layout Switch Bug1914
  • Graph Cut Segment Self Test
  • Charting (scripted, built-in)
  • Cardiac Agatston Measures (scripted, bundled in Cardiac Agatston Measures extension)
  • fiber visibility crash2438
  • RSNAVis Tutorial
  • JRC2013Vis
  • Add Many Markups Fiducial Test
  • Slicer4Minute (scripted, built-in)
  • Crop Volume Self Test
  • Slice Link Logic (scripted, built-in)
  • Volume Rendering Scene Close (scripted, built-in)
  • slicer Close Crash Bug2590
  • Tables Self Test
  • Markups In Views Self Test
  • Two CLIs In Parallel Test
  • Subject Hierarchy Core Plugins Self Test
  • Subject Hierarchy Generic Self Test
  • Scene Performance (scripted, built-in)
  • Markups In Compare Viewers Self Test
  • scene Import2428
  • RSNA2012Prostate Demo
  • DTINot Reproducible Issue3977
  • Two CLIs In ARow Test
  • Colors Scalar Bar Self Test
  • View Controllers Slice Interpolation Bug1926

Utilities

  • Data Store (loadable, built-in)
  • BRAINSStrip Rotation (cli, built-in)
  • EMSegment Transform To New Format (cli, built-in)

BRAINS

  • BRAINSTransform Convert (cli, built-in)

Vascular Modeling Toolkit

Wizards

Work in Progress

Modules by name

320 modules: