Difference between revisions of "Documentation/Nightly/Extensions/PETTumorSegmentation"

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(updated funding sources)
(The support for editor module has been removed from Slicer and corresponding effect removed from the extension in https://github.com/QIICR/PETTumorSegmentation/commit/325e187d4ec75c6054f895bdc60b9423eebe9842)
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*[[Documentation/{{documentation/version}}/Modules/PETTumorSegmentationEffect|PET Tumor Segmentation Editor Effect]] for use with Slicer's Labelmap Editor
 
*[[Documentation/{{documentation/version}}/Modules/PETTumorSegmentationEffect|PET Tumor Segmentation Editor Effect]] for use with Slicer's Labelmap Editor
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*[[Documentation/{{documentation/version}}/Modules/PETTumorSegmentEditorEffect|PET Tumor Segmentation Segment Editor Effect]] for use with Slicer's Segment Editor
 
*[[Documentation/{{documentation/version}}/Modules/PETTumorSegmentEditorEffect|PET Tumor Segmentation Segment Editor Effect]] for use with Slicer's Segment Editor
 
*PETTumorSegmentation Plugin: This plugin provides the functionality used by the editor effects for the actual processing. It is hidden from the GUI and not intended to be used directly.
 
*PETTumorSegmentation Plugin: This plugin provides the functionality used by the editor effects for the actual processing. It is hidden from the GUI and not intended to be used directly.

Latest revision as of 22:13, 14 December 2021

Home < Documentation < Nightly < Extensions < PETTumorSegmentation


For the latest Slicer documentation, visit the read-the-docs.


Introduction and Acknowledgements

Acknowledgments: The UIowa QIN PET Tumor Segmentation tool was funded in part by Quantitative Imaging to Assess Response in Cancer Therapy Trials NIH grant U01-CA140206, Quantitative Image Informatics for Cancer Research (QIICR) NIH grant U24 CA180918, and Graph-based Medical Image Segmentation in 3D and 4D NIH grant R01 EB004640.
Authors: Christian Bauer (University of Iowa), Markus van Tol (University of Iowa)
Contributors: Ethan Ulrich (University of Iowa), Andrey Fedorov (SPL), Reinhard Beichel (University of Iowa), John Buatti (University of Iowa)
Contact: <email>qin@iibi.uiowa.edu</email>

License: Slicer License

The University of Iowa (UIowa)  
Quantitative Image Informatics for Cancer Research  
National Alliance for Medical Image Computing (NA-MIC)  

Extension Description

This tool provides an Editor-Effect for semi-automated segmentation of tumors and hot lymph nodes in PET scans. A detailed description and evaluation of the method can be found in Beichel et al. (2016): "Semiautomated Segmentation of Head and Neck Cancers in 18F-FDG PET Scans: A Just-Enough-Interaction Approach", in Medical Physics. http://dx.doi.org/10.1118/1.4948679

PET Tumor Segmentation Extension

Modules

  • PET Tumor Segmentation Segment Editor Effect for use with Slicer's Segment Editor
  • PETTumorSegmentation Plugin: This plugin provides the functionality used by the editor effects for the actual processing. It is hidden from the GUI and not intended to be used directly.

Information for Developers