Difference between revisions of "Documentation/Nightly/Extensions/LongitudinalQuantification"

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{{documentation/{{documentation/version}}/extension-section|Extension Description}}
 
{{documentation/{{documentation/version}}/extension-section|Extension Description}}
This extension contains different modules that allow the user to either quantify differences between two models or make measurements on the shape of a model.<br>
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This extension is a collection of different modules that will enable the user to quantify shape differences between two models and/or compute shape statistics in a model .<br>
  
The user will first have the possibility to make some preprocessing on the models by cropping them ([[Documentation/{{documentation/version}}/Modules/EasyClip|EasyClip]]) and/or making registration between models ([[Documentation/{{documentation/version}}/Modules/SurfaceRegistration|SurfaceRegistration]]).<br>
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LongitudinalQuantification includes preprocessing tools, allowing the user to edit the models by cropping them ([[Documentation/{{documentation/version}}/Modules/EasyClip|EasyClip]]) and/or making registration between models([[Documentation/{{documentation/version}}/Modules/SurfaceRegistration|SurfaceRegistration]]).<br>
Then he will have the choice to compute distances between points ([[Documentation/{{documentation/version}}/Modules/Q3DC|Q3DC]]) or angles between lines ([[Documentation/{{documentation/version}}/Modules/Q3DC|Q3DC]]) or planes ([[Documentation/{{documentation/version}}/Modules/AnglePlanes|AnglePlanes]]).<br>
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The user will have the choice to compute distances between points ([[Documentation/{{documentation/version}}/Modules/Q3DC|Q3DC]]) or angles between lines ([[Documentation/{{documentation/version}}/Modules/Q3DC|Q3DC]]) or planes ([[Documentation/{{documentation/version}}/Modules/AnglePlanes|AnglePlanes]]).<br>
He will finally be able to create distance maps ([[Documentation/{{documentation/version}}/Extensions/ModelToModelDistance|ModelToModelDistance]]) to either display them as color maps ([[Documentation/{{documentation/version}}/Extensions/ShapePopulationViewer|ShapePopulationViewer]]) or compute statistics ([[Documentation/{{documentation/version}}/Modules/MeshStatistics | MeshStatistics]]) on the entire model or just a region of interest ([[Documentation/{{documentation/version}}/Modules/PickAndPaint|PickAndPaint]]).<br>
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He will be able to create distance maps ([[Documentation/{{documentation/version}}/Extensions/ModelToModelDistance|ModelToModelDistance]]) to either display them as color maps ([[Documentation/{{documentation/version}}/Extensions/ShapePopulationViewer|ShapePopulationViewer]]) or compute statistics ([[Documentation/{{documentation/version}}/Modules/MeshStatistics | MeshStatistics]]) on the entire model or just a region of interest ([[Documentation/{{documentation/version}}/Modules/PickAndPaint|PickAndPaint]]).<br>
  
 
All those modules will be available to use by themselves or all at once by using [[Documentation/{{documentation/version}}/Modules/LongitudinalQuantification|LongitudinalQuantification]] that will guide the user through the different steps.<br>
 
All those modules will be available to use by themselves or all at once by using [[Documentation/{{documentation/version}}/Modules/LongitudinalQuantification|LongitudinalQuantification]] that will guide the user through the different steps.<br>

Latest revision as of 14:58, 20 May 2016

Home < Documentation < Nightly < Extensions < LongitudinalQuantification


For the latest Slicer documentation, visit the read-the-docs.


Introduction and Acknowledgements

Author: Jean-Baptiste Vimort, University of Michigan
Contributors:
- From the University of Michigan: Lucia Cevidanes, Julia Lopinto, Lucie Macron
- From the University of North Carolina: Francois Budin, Beatriz Paniagua, Juan-Carlos Prieto
Contact: Jean-Baptiste Vimort, <email>jb.vimort@gmail.com</email>
Acknowledgments: This work was supported by the National Institues of Dental and Craniofacial Research and Biomedical Imaging and Bioengineering of the National Institutes of Health under Award Number R01DE024450

Extension Description

This extension is a collection of different modules that will enable the user to quantify shape differences between two models and/or compute shape statistics in a model .

LongitudinalQuantification includes preprocessing tools, allowing the user to edit the models by cropping them (EasyClip) and/or making registration between models(SurfaceRegistration).
The user will have the choice to compute distances between points (Q3DC) or angles between lines (Q3DC) or planes (AnglePlanes).
He will be able to create distance maps (ModelToModelDistance) to either display them as color maps (ShapePopulationViewer) or compute statistics ( MeshStatistics) on the entire model or just a region of interest (PickAndPaint).

All those modules will be available to use by themselves or all at once by using LongitudinalQuantification that will guide the user through the different steps.

Modules

Related Extensions

Information for Developers