Difference between revisions of "Documentation/Nightly/Extensions/Igyne"

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Moved to http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/iGyne
{{documentation/{{documentation/version}}/module-section|Introduction and Acknowledgements}}
 
Author: Xiaojun Chen<br>
 
Contributors: Xiaojun Chen,Jan Egger,Tina Kapur,Akila N. Viswanathan(BWH), Steve Pieper(Isomics)<br>
 
Contact: Xiaojun Chen, <email>xiaojun@bwh.harvard.edu</email><br>
 
Website: https://github.com/xjchen/igyne<br>
 
License: [http://www.slicer.org/pages/LicenseText Slicer license]
 
 
 
 
 
 
 
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{{documentation/{{documentation/version}}/extension-section|Extension Description}}
 
Igyne is an open source software for MR-Guided Interstitial Gynecologic Brachytherapy. It enables on-time processing of the intra-operative MRI data via a DICOM connection to the scanner followed by a multi-stage registration of CAD models of the template and the obturator to the patient images. This allows the virtual placement of interstitial needles during the intervention to assist the physician positioning decision.Software features include:
 
 
 
*Loading of Applicator CAD models and MR images
 
*Initial registration of CAD model of the Template to MR images
 
*Registration Refinement
 
*Visualization of Registration
 
*Needle Selection and Display of Virtual Needles relative to Applicator CAD models and Tumor Segmentation
 
 
 
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[https://github.com/xjchen/igyne/tree/master/scene%20for%20template%20and%20obturator Sample data] to use with modules.
 
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{{documentation/{{documentation/version}}/extension-section|Tutorials}}
 
 
 
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Image:plastimatch_tutorial_ppt.png|[http://forge.abcd.harvard.edu/gf/download/frsrelease/110/1023/3D_Slicer_Plastimatch_Registration_Tutorial.ppt Download tutorial]
 
Image:plastimatch_tutorial_data.png|[http://forge.abcd.harvard.edu/gf/download/frsrelease/85/1004/rider-lung-images.tar.gz Download tutorial data]
 
Image:plastimatch_dicomrt_tutorial_ppt.png|[http://forge.abcd.harvard.edu/gf/download/frsrelease/110/1568/3D_Slicer_Plastimatch_DICOM_RT_Tutorial_2010_12_28.pdf Download tutorial (PDF)]
 
Image:plastimatch_dicomrt_ss.png|[http://forge.abcd.harvard.edu/gf/download/frsrelease/85/934/chest-phantom-dicomrt-xio-4.33.02.tar.gz (Download tutorial data)]
 
Image:3D_Slicer_Plastimatch_Landmark_Registration_Tutorial.png|[http://forge.abcd.harvard.edu/gf/download/frsrelease/110/1622/3D_Slicer_Plastimatch_Landmark_Registration_Tutorial.ppt Download tutorial]
 
Image:fixed.png|[http://forge.abcd.harvard.edu/gf/download/frsrelease/85/1619/synthetic_img.zip Download tutorial data]
 
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{{documentation/{{documentation/version}}/extension-section|Similar Extensions}}
 
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{{documentation/{{documentation/version}}/extension-section|References}}
 
* http://www.na-mic.org/Wiki/index.php/2012_Summer_Project_Week:iGyne  
 
* Xiaojun Chen, Jan Egger, Akila Viswanathan, Neha Agrawal, William Wells, Ron Kikinis, Clare Tempany, Ferenc Jolesz and Tina Kapur.  "Image Processing for MR-guided Gynecologic Interstitial Brachytherapy in AMIGO", The 9th Interventional MRI Symposium. September 22-23, 2012.
 
 
 
 
 
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{{documentation/{{documentation/version}}/extension-section|Information for Developers}}
 
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Latest revision as of 07:50, 14 June 2013

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