From Slicer Wiki
Revision as of 20:38, 4 September 2020 by JChris.FillionR (talk | contribs)
Jump to: navigation, search
Home < Documentation < Labs < ExtensionsServer

This document summarizes the plan to update the infrastructure used to organize the Slicer application and extension packages.


In progress:


  • Setup monitoring of backend services
    • Estimated completion: ??
  • Setup backup of backend database and assets
    • Estimated completion: ??
  • Update Slicer to integrate with new frontend
    • Estimated completion: July 23th July 30th Sept 15th
  • Update to interface with new backend
    • Estimated completion: ??
  • Setup recurring tasks for uploading of backend webserver log to GitHub project for later processing
    • Estimated completion: August 4th Oct 1st
  • Engage with our UI team so that we have a consistent theme between the landing page and
    • Estimated completion: August 15th Oct 1st


Source code

Transition Plan

  • finalize design and implementation of new extension server (see details below)
  • update to use updated API
  • work with sysadmin to setup server instance
  • transition data from current system to new system
  • update integration with Slicer app

Extension server



Preliminary work:



  • leverage the existing work. See
  • deployed by Kitware Sysadmin and publicly available as
    • Also discussed the possibility of hosting this on Digital Ocean to allow maintenance with community. But this would likely make backup of the database and restoring of the system more complex.
  • used to manage both application and extension packages
  • extension download stats will be simple download count per Extension per release
  • web server logs associated with the backend would be uploaded daily to a private Github project. This would allow the community to generate detailed stats. Similarly to what is done with mhalle/slicer4-download/slicer4-parselogs


  • ideally Slicer package will be uploaded as GitHub release assets by the build machine and only a URL would be uploaded to Girder. The backend would return a redirect code

Current infrastructure

The current infrastructure is on "life-support":

  • the operating system is out-dated, we are working with sysadmin to update it while keeping an older php version (which itself will go end-of-life by the end of the year)
  • we are having more and more failed upload because the server require more and more memory.
  • more and more user are reporting problems with failed upload and download.


During the past two years, we have been working toward phasing out the aging Midas based server used to host, serve and manage Slicer application and extension packages.

  • (1) We now have a Girder plugin for the backend (meaning API endpoints and database interaction). See
  • (2) We also experimented with few prototype regarding the extension manager but have nothing production ready.

(1) and (2) were done by one of our former intern Pierre Assemat and was funded by the D&A group.