Latest revision as of 17:32, 21 November 2019

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Modules by contributing individual

Modules by contributing individual

200 contributing individuals:

/
a
Akila Viswanathan
Alan Morris (Utah)
Alex Yarmakovich (Isomics)
Alex Yarmarkovich (Kitware))
Ali Ghayoor
Alireza Mehrtash (SPL and BWH)
Allen Tannenbaum (Stony Brook University)
Alvaro Gomez (Facultad de Ingenieria, Uruguay)
Amelie Meyer (PerkLab, Queen's University)
Analysis Laboratory
Andinet Enquobahrie (Kitware)
Andras Lasso (PerkLab, Queen's Universit)
Andreas Freudling (SPL, BWH)
Andrey Fedorov (SPL B&W Harvard)
Andriy Kot (CRTC)
Anonymous
Antonio Damato
Antonio Tristan Vega (UVa)
Anuja Sharma
Arie Nakhmani (UAB)
Atsushi Yamada (Shiga University of Medical Science)
Beatriz Paniagua from Department of Orthodontics (UNC)
Benjamin Long (Kitware)
Benjamin Yvernault
Bill Lorensen (Noware)
Brad Davis
Bradley Lowekamp (MSC/NLM)
Brian Zenger (CARMA)
BWH
c
Carl-Fredrik Westin
Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez (Kitware))
Casey B Goodlett (Kitware)
Charles Marion (Kitware)
Christian Bauer (Univ. of Iowa)
Christian Baumgartner
Csaba Pinter (PerkLab, Queen's University)
Daniel Blezek (GE)
Daniel Haehn (UPenn)
Danny Perry (Utah)
Demian Wassermann (Brigham and Women's Hospital)
Dinggang Shen (UNC)
Dirk Padfield (GE)
Dominik Meier (SPL, BWH)
e
er (Kingston General Hospital)
Ethan Ulrich (Univ. of Iowa)
Eugene Kholmovski (CARMA)
ez (UVa)
Fotis Drakopoulos (CRTC)
Francois Budin (NIRAL, UNC)
Franklin King (PerkLab, Queen's University)
Greg Gardner (Utah)
Greg Harris
Greg Sharp (MGH, Boston)
Gregory Sharp (MGH)
Guido Gerig (UNC)
Guillaume Pernelle
Guillermo Carbajal (Facultad de Ingenieria, Uruguay)
Hans J. Johnson
Hans Johnson (SINAPSE)
hans-johnson -at- uiowa.edu
http://www.psychiatry.uiowa.edu
i
Ipek Oguz (University of Iowa)
Ivan Kolesov (Stony Brook University)
Jaime Garcia-Guevara (Queen's University)
Jan Egger
Jayender Jagadeesan (BWH)
Jean-Baptiste Berger (Kitware)
Jean-Baptiste VIMORT (University of Michigan)
Jean-Baptiste Vimort (University of Michigan)
Jean-Christophe Fillion-Robin (Kitware)
Jennifer Andrea (PerkLab, Queen's University)
Jessica Forbes (SINAPSE)
Jim Miller (GE)
Johan Andruejol (Kitware)
John Buatti (Univ. of Iowa)
John Evans (MGH)
Jonathan Bronson (SCI Institute)
Josh Cates (Utah)
Joy Matsui (UIowa)
Juan Carlos Prieto
Julia Lopinto (University of Michigan)
Julien Finet (Kitware)
Julien Jomier (Kitware)
Juliette Pera (UNC)
Junichi Tokuda (BWH)
K
Kent Williams (UIowa)
Kent WIlliams
Kevin Alex (Kingston General Hospital)
Kevin Wang (Princess Margaret Cancer Centre)
Kilian Pohl (UPenn)
Koichiro Murakami (SUMS)
Kyle Sunderl (Queen's University)
l
Lauren Barber
Lauren O'Donnell (SPL, BWH)
Laurent Chauvin (BWH)
Liang-Jia Zhu (UAB)
Liangjia Zhu (Stony Brook University)
Luca Antiga (Orobix)
Lucie Macron (University of Michigan)
Luis G. Torres (UNC)
Luping Fang (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
m
Marc Niethammer (UNC)
Marcel Prastawa marcel.prastawa@gmail.com
Mark Scully (Uiowa)
Markus Van Tol (University of Iowa) and Andrey Fedorov (SPL)
Markus van Tol (Univ. of Iowa)
Martin Bertran (Facultad de Ingenieria, Uruguay)
Martin Styner (UNC)
Mason Winsauer
Matt Lougheed (PerkLab, Queen's University)
Mattea Welch (PerkLab, Queen's University)
Matthew Holden (Queen's University)
Matthew S. Holden (Queen's University)
Matthew Woehlke (Kitware)
Michael Jeulin-Lagarrigue (Kitware)
Minjeong Kim (UNC)
Nabgha Fahrat
Natalia Martinez
Neuro Image Resarch
Nicholas Herlambang (AZE R&D)
Nick Tustison (UPenn)
Nicole Aucoin (BWH)
Nigel Goh (UWA)
Nikos Chrisochoides (CRTC)
Olivier Clatz (Asclepios INRIA) and Nikos Chrisochoides (CRTC)
p
Paolo Zaffino (University 'Magna Graecia' of Catanzaro)
Pat Marion (Kitware)
Paul Mercea (University of Heidelberg)
Pengdong Xiao (Department of Orthodontics, UNC)
Peter Black (BWH)
Peter Karasev (Georgia Tech)
Peter Savadjiev (Kitware))
Pierre Seroul (UNC)
Pietro Nardelli (University College Cork)
Please direct questions or suggestions to http://groups.google.com/group/plastimatch
Polina Goll
Qing Pan (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
r
R
Raul San Jose (SPL, BWH)
Reinhard Beichel (University of Iowa)
Reinhard R. Beichel (Univ. of Iowa)
Rob Mac Leod (Utah)
Ron Kikinis (BWH)
Ross Whitaker (Utah)
Ruifeng Chen (College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)
S
Salma Bengali (CARMA)
Sam Song
Santiago Aja Fern (UVa)
Sebastien Barré (Kitware)
Sebastien Barre
Shigeyuki Naka (SUMS)
Soichiro Tani (BWH, SUMS)
Sonia Pujol (SPL, BWH)
Stefan Lienhard
Stephen Aylward (Kitware)
Stephen R Aylward (Kitware)
Steve Pieper (SPL)
Sylvain Bouix (BWH)
Sylvain Gouttard
t
Tamas Ungi (PerkLab, Queen's Universit)
the University of North Carolina at Chapel Hill (UNC)
Thomas Lawson (MRC Harwell, Oxfordshire)
Tina Kapur
Tobias Penzkofer
Tohru Tani (SUMS)
UNC Medical School
Uof M School Of Dentistry
Uof M School of Dentistry
Vince Magnotta (UIowa)
Vincent A. Magnotta
Vincent Magnotta
Vinicius Boen (Univ of Michigan)
Vivek Narayan (BWH)
Wendy Plesniak (SPL, BWH)
Xiaodong Tao (GE)
Xiaofeng Liu (GE GLobal Research)
Xiaojun Chen
y Wells
Yanling Liu (SAIC-Frederick, NCI-Frederick)
Yi Gao (BWH/UAB)
Yinglin Lee (SPL, BWH)
Yingxuan Zhu (GE)
Yinpeng Li
Yixun Liu (CRTC)
Yogesh Rathi (yogesh@bwh.harvard.edu)
Yong Zhang (IBM)
Yumin Yuan
Yundi Shi

/

Dicom Rt Import Plugin

a

Dicom Rt Import Plugin

Akila Viswanathan

i Gyne (scripted, bundled in i Gyne extension)
Needle Finder (scripted, bundled in Needle Finder extension)

Alan Morris

CMRToolkit Automatic Left Atrial Scar (cli, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)
Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)

Alex Yarmakovich

Models (loadable, built-in)
Tractography Interactive Seeding (loadable, built-in)

Alex Yarmarkovich

Data (loadable, built-in)
Finsler Backtracing (cli, bundled in Finsler Tractography extension)
Finsler Tractography (cli, bundled in Finsler Tractography extension)
Image Label Combine (cli, built-in)
Transforms (loadable, built-in)
Volume Rendering (loadable, built-in)
Volumes (loadable, built-in)

Ali Ghayoor

BRAINSTransform Convert (cli, built-in)
Perform Metric Test (cli, built-in)

Alireza Mehrtash

i Gyne (scripted, bundled in i Gyne extension)
Needle Finder (scripted, bundled in Needle Finder extension)
TCIABrowser (scripted, bundled in TCIABrowser extension)

Allen Tannenbaum

LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
Robust Statistics Segmenter (cli, built-in)
Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)
Sobolev Segmenter (cli, bundled in Sobolev Segmenter extension)

Alvaro Gomez

d Pet Brain Quantification (scripted, bundled in Pet Spect Analysis extension)

Amelie Meyer

Plus Remote (scripted, bundled in Slicer IGT extension)

Analysis Laboratory

Apply Matrix (cli, bundled in CMFreg extension)
Downsize (cli, bundled in CMFreg extension)
Growing (cli, bundled in CMFreg extension)
Label Addition (cli, bundled in CMFreg extension)
Label Extraction (cli, bundled in CMFreg extension)
Mask Creation (cli, bundled in CMFreg extension)
Non Growing (cli, bundled in CMFreg extension)

Andinet Enquobahrie

Port Placement (scripted, bundled in Port Placement extension)

Andras Lasso

Contour Comparison (loadable, bundled in Slicer RT extension)
Contour Morphology (loadable, bundled in Slicer RT extension)
Contours (loadable, bundled in Slicer RT extension)
Dicom Rt Export (loadable, bundled in Slicer RT extension)
Dicom Rt Import (loadable, bundled in Slicer RT extension)
Dose Accumulation (loadable, bundled in Slicer RT extension)
Dose Comparison (loadable, bundled in Slicer RT extension)
Dose Volume Histogram (loadable, bundled in Slicer RT extension)
Extension Stats (scripted, bundled in Developer Tools For Extensions extension)
Isodose (loadable, bundled in Slicer RT extension)
Matlab Commander (cli, bundled in Matlab Bridge extension)
Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
Metafile Importer (loadable, bundled in Multidim Data extension)
Model Registration (scripted, bundled in Slicer IGT extension)
Plus Remote (scripted, bundled in Slicer IGT extension)
Sequence Browser (loadable, bundled in Multidim Data extension)
Sequences (loadable, bundled in Multidim Data extension)
Transforms (loadable, built-in)
Volume Clip With Model (scripted, bundled in Volume Clip extension)
Volume Clip With Roi (scripted, bundled in Volume Clip extension)

Andreas Freudling

Volume Rendering (loadable, built-in)

Andrey Fedorov

Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
BSpline To Deformation Field (cli, built-in)
Change Tracker (scripted, bundled in Change Tracker extension)
Change Tracker Self Test
Crop Volume (loadable, built-in)
DICOMRWVMPlugin
DICOMSegmentation Plugin
Intensity Difference Metric (cli, bundled in Change Tracker extension)
Label To DICOMSEGConverter (scripted, bundled in Reporting extension)
Label To DICOMSEGConverter Self Test
Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
Multi Volume Explorer (loadable, built-in)
Multi Volume Importer (scripted, built-in)
Multi Volume Importer Plugin
N4ITKBias Field Correction (cli, built-in)
PBNRR (cli, bundled in PBNRR extension)
Pk Modeling (cli, bundled in Pk Modeling extension)
Quantitative Indices CLI (cli, bundled in PET-Indi C extension)
Quantitative Indices Tool (scripted, bundled in PET-Indi C extension)
Reporting (loadable, bundled in Reporting extension)
Reporting Self Test
SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
TCIABrowser (scripted, bundled in TCIABrowser extension)
Window Level Effect (scripted, bundled in Window Level Effect extension)

Andriy Kot

PBNRR (cli, bundled in PBNRR extension)

Anonymous

CLIROITest (cli, built-in)
EMSegment Transform To New Format (cli, built-in)

Antonio Damato

i Gyne (scripted, bundled in i Gyne extension)
Needle Finder (scripted, bundled in Needle Finder extension)

Antonio Tristan Vega

DWIJoint Rician LMMSEFilter (cli, built-in)
DWIRician LMMSEFilter (cli, built-in)
DWIUnbiased Non Local Means Filter (cli, built-in)
Finsler Backtracing (cli, bundled in Finsler Tractography extension)
Finsler Tractography (cli, bundled in Finsler Tractography extension)

Anuja Sharma

dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)

Arie Nakhmani

Sobolev Segmenter (cli, bundled in Sobolev Segmenter extension)

Atsushi Yamada

Corner Annotation (scripted, bundled in Corner Annotation extension)
Path Explorer (loadable, bundled in Slicer IGT extension)
Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)

Beatriz Paniagua from Department of Orthodontics

Intensity Segmenter (cli, bundled in Intensity Segmenter extension)

Benjamin Long

Sample Data (scripted, built-in)

Benjamin Yvernault

DTIAtlas Fiber Analyzer (cli, bundled in DTIAtlas Fiber Analyzer extension)

Bill Lorensen

Add Scalar Volumes (cli, built-in)
Checker Board Filter (cli, built-in)
Create DICOMSeries (cli, built-in)
Curvature Anisotropic Diffusion (cli, built-in)
Diffusion Tensor Test (cli, built-in)
Execution Model Tour (cli, built-in)
Gradient Anisotropic Diffusion (cli, built-in)
Grayscale Fill Hole Image Filter (cli, built-in)
Grayscale Grind Peak Image Filter (cli, built-in)
Grayscale Model Maker (cli, built-in)
Histogram Matching (cli, built-in)
Median Image Filter (cli, built-in)
Model Maker (cli, built-in)
Multiply Scalar Volumes (cli, built-in)
Orient Scalar Volume (cli, built-in)
Otsu Threshold Image Filter (cli, built-in)
Resample Scalar Volume (cli, built-in)
Spacing Aware Curvature Diffusion (cli, bundled in IASEM extension)
Subtract Scalar Volumes (cli, built-in)
Swiss Skull Stripper (cli, bundled in Swiss Skull Stripper extension)
Voting Binary Hole Filling Image Filter (cli, built-in)

Brad Davis

EMSegment Command Line (cli, built-in)

Bradley Lowekamp

Bin Shrink (cli, bundled in IASEM extension)
Double Threshold Effect (scripted, bundled in IASEM extension)
IASEMImport (cli, bundled in IASEM extension)
IASEMImport Series (cli, bundled in IASEM extension)
Label Object Statistics (scripted, bundled in IASEM extension)
Simple Filters (scripted, built-in)
Spacing Aware Curvature Diffusion (cli, bundled in IASEM extension)

Brian Zenger

CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)

BWH

DICOMSegmentation Plugin
Multi Volume Importer Plugin

c

Dicom Rt Import Plugin

Carl-Fredrik Westin

UKFTractography (cli, bundled in UKFTractography extension)

Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez

Finsler Backtracing (cli, bundled in Finsler Tractography extension)
Finsler Tractography (cli, bundled in Finsler Tractography extension)

Casey B Goodlett

Expert Automated Registration (cli, built-in)
Fiducial Registration (cli, built-in)

Charles Marion

Data Store (loadable, built-in)

Christian Bauer

PETIndi C (scripted, bundled in PET-Indi C extension)
PETTumor Segmentation (loadable, bundled in PETTumor Segmentation extension)
PETTumor Segmentation Effect (scripted, bundled in PETTumor Segmentation extension)
Quantitative Indices CLI (cli, bundled in PET-Indi C extension)
Quantitative Indices Tool (scripted, bundled in PET-Indi C extension)
SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)

Christian Baumgartner

Convert VTK (cli, bundled in UKFTractography extension)
UKFTractography (cli, bundled in UKFTractography extension)

Csaba Pinter

Batch Contour Conversion (scripted, bundled in Slicer RT extension)
Beams (loadable, bundled in Slicer RT extension)
Contour Comparison (loadable, bundled in Slicer RT extension)
Contour Morphology (loadable, bundled in Slicer RT extension)
Contours (loadable, bundled in Slicer RT extension)
Data (loadable, built-in)
Dicom Rt Export (loadable, bundled in Slicer RT extension)
Dicom Rt Import (loadable, bundled in Slicer RT extension)
Dicom Rt Import Self Test
Dose Accumulation (loadable, bundled in Slicer RT extension)
Dose Comparison (loadable, bundled in Slicer RT extension)
Dose Volume Histogram (loadable, bundled in Slicer RT extension)
Dvh Comparison (scripted, bundled in Slicer RT extension)
Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)
Gel Dosimetry Analysis Algo (loadable, bundled in Gel Dosimetry Analysis extension)
Isodose (loadable, bundled in Slicer RT extension)
NAMIC Tutorial 2013June Self Test
Planar Image (loadable, bundled in Slicer RT extension)
Subject Hierarchy (loadable, built-in)
Subject Hierarchy Core Plugins Self Test
Subject Hierarchy Generic Self Test
Vff File Reader (loadable, bundled in Slicer RT extension)

Daniel Blezek

Execution Model Tour (cli, built-in)

Daniel Haehn

Annotations (loadable, built-in)
Centerline Computation (scripted, bundled in VMTK extension)
EMSegment (loadable, built-in)
EMSegment Command Line (cli, built-in)
Level Set Segmentation (scripted, bundled in VMTK extension)
Merge Models (cli, built-in)
Scene Views (loadable, built-in)
Vesselness Filtering (scripted, bundled in VMTK extension)

Danny Perry

CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)

Demian Wassermann

DICOM2Full Brain Tractography (scripted, built-in)
Diffusion Weighted Volume Masking (cli, built-in)
Fiber Bundle Label Select (cli, built-in)
Finsler Backtracing (cli, bundled in Finsler Tractography extension)
Finsler Tractography (cli, bundled in Finsler Tractography extension)
test tractography display
Tractography Label Map Seeding (cli, built-in)

Dinggang Shen

IGR3D MABMIS Testing (cli, bundled in MABMIS extension)
IGR3D MABMIS Training (cli, bundled in MABMIS extension)

Dirk Padfield

Label Map Smoothing (cli, built-in)

Dominik Meier

Fiducial Registration (cli, built-in)

e

Dicom Rt Import Plugin

er

Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)

Ethan Ulrich

DICOMPETSUVPlugin
DICOMRWVMPlugin
PETIndi C (scripted, bundled in PET-Indi C extension)
Quantitative Indices CLI (cli, bundled in PET-Indi C extension)
Quantitative Indices Tool (scripted, bundled in PET-Indi C extension)
SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)

Eugene Kholmovski

CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)

ez

DWIJoint Rician LMMSEFilter (cli, built-in)
DWIRician LMMSEFilter (cli, built-in)
DWIUnbiased Non Local Means Filter (cli, built-in)

Fotis Drakopoulos

Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
PBNRR (cli, bundled in PBNRR extension)

Francois Budin

Angle Planes (scripted, bundled in Angle Planes Extension extension)
Developer Tools For Extensions (scripted, bundled in Developer Tools For Extensions extension)
DTIAtlas Fiber Analyzer (cli, bundled in DTIAtlas Fiber Analyzer extension)
dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
Intensity Segmenter (cli, bundled in Intensity Segmenter extension)
Mesh To Label Map (cli, bundled in Mesh To Label Map extension)
Model To Model Distance (cli, bundled in Model To Model Distance extension)
Resample DTIlog Euclidean (cli, bundled in Resample DTIlog Euclidean extension)
Resample DTIVolume (cli, built-in)
Resample Scalar Vector DWIVolume (cli, built-in)

Franklin King

Collect Fiducials (loadable, bundled in Slicer IGT extension)
Pivot Calibration (loadable, bundled in Slicer IGT extension)
Plus Remote (scripted, bundled in Slicer IGT extension)
Scoliosis Monitoring (scripted, bundled in Scoliosis extension)
Spinal Curvature Measurement (scripted, bundled in Scoliosis extension)
Transform Fusion (loadable, bundled in Slicer IGT extension)
Transforms (loadable, built-in)

Greg Gardner

CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)

Greg Harris

BRAINSDemon Warp (cli, built-in)
BRAINSResample (cli, built-in)
VBRAINSDemon Warp (cli, built-in)

Greg Sharp

Dicom Rt Export (loadable, bundled in Slicer RT extension)

Gregory Sharp

Dicom Sro Export (scripted, bundled in Slicer RT extension)
Plm Register (scripted, bundled in Slicer RT extension)

Guido Gerig

dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
Extract Skeleton (cli, built-in)

Guillaume Pernelle

i Gyne (scripted, bundled in i Gyne extension)
Needle Finder (scripted, bundled in Needle Finder extension)

Guillermo Carbajal

d Pet Brain Quantification (scripted, bundled in Pet Spect Analysis extension)

Hans J. Johnson

BRAINSDemon Warp (cli, built-in)
BRAINSFit (cli, built-in)
BRAINSROIAuto (cli, built-in)
BRAINSTransform Convert (cli, built-in)
VBRAINSDemon Warp (cli, built-in)

Hans Johnson

BRAINSResample (cli, built-in)
BRAINSResize (cli, built-in)
Cardiac Agatston Measures (scripted, bundled in Cardiac Agatston Measures extension)
DWIConvert (cli, built-in)
PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
UKFTractography (cli, bundled in UKFTractography extension)

hans-johnson -at- uiowa.edu

BRAINSFit (cli, built-in)
BRAINSROIAuto (cli, built-in)

http://www.psychiatry.uiowa.edu

BRAINSFit (cli, built-in)
BRAINSROIAuto (cli, built-in)

i

Dicom Rt Import Plugin

Ipek Oguz

Convert VTK (cli, bundled in UKFTractography extension)
Mesh To Label Map (cli, bundled in Mesh To Label Map extension)
UKFTractography (cli, bundled in UKFTractography extension)

Ivan Kolesov

Carrera Slice (loadable, bundled in Carrera Slice extension)

Jaime Garcia-Guevara

Watchdog (loadable, bundled in Slicer IGT extension)

Jan Egger

i Gyne (scripted, bundled in i Gyne extension)

Jayender Jagadeesan

Heterogeneity CAD (scripted, bundled in Open CAD extension)
Segment CAD (scripted, bundled in Open CAD extension)
Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)

Jean-Baptiste Berger

Data Store (loadable, built-in)
DTIAtlas Fiber Analyzer (cli, bundled in DTIAtlas Fiber Analyzer extension)
Fiber Compare (cli, bundled in DTIAtlas Fiber Analyzer extension)
Merge Stat With Fiber (cli, bundled in DTIAtlas Fiber Analyzer extension)

Jean-Baptiste VIMORT

Surface Registration (scripted, bundled in CMFreg extension)

Jean-Baptiste Vimort

Easy Clip (scripted, bundled in Easy Clip extension)
Pick And Paint (scripted, bundled in Pick And Paint Extension extension)

Jean-Christophe Fillion-Robin

CLI4Test
Data Store (loadable, built-in)
Extension Stats (scripted, bundled in Developer Tools For Extensions extension)
Fast Grow Cut (loadable, bundled in Fast Grow Cut Effect extension)
Fast Grow Cut Segmenter (loadable, bundled in Carrera Slice extension)
fiber visibility crash2438
label Toggle Bug2049
Matlab Commander (cli, bundled in Matlab Bridge extension)
Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
Multi Volume Explorer (loadable, built-in)
Multi Volume Importer (scripted, built-in)
Sample Data (scripted, built-in)
Simple Filters (scripted, built-in)
Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
Transforms (loadable, built-in)
View Controllers (loadable, built-in)
Welcome (loadable, built-in)

Jennifer Andrea

Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)
Vff File Reader (loadable, bundled in Slicer RT extension)

Jessica Forbes

Cardiac Agatston Measures (scripted, bundled in Cardiac Agatston Measures extension)

Jim Miller

Charting (scripted, built-in)
Pk Modeling (cli, bundled in Pk Modeling extension)
Simple Region Growing Segmentation (cli, built-in)
Slice Link Logic (scripted, built-in)
Slicer4Minute (scripted, built-in)
View Controllers (loadable, built-in)
View Controllers Slice Interpolation Bug1926

Johan Andruejol

Units (loadable, built-in)

John Buatti

PETIndi C (scripted, bundled in PET-Indi C extension)
Quantitative Indices CLI (cli, bundled in PET-Indi C extension)
Quantitative Indices Tool (scripted, bundled in PET-Indi C extension)
SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)

John Evans

Pk Modeling (cli, bundled in Pk Modeling extension)

Jonathan Bronson

Cleaver CLI (cli, bundled in Cleaver Extension extension)

Josh Cates

CMRToolkit Automatic Left Atrial Scar (cli, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
Label Map Smoothing (cli, built-in)
LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)
Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)

Joy Matsui

DWIConvert (cli, built-in)

Juan Carlos Prieto

Angle Planes (scripted, bundled in Angle Planes Extension extension)

Julia Lopinto

Angle Planes (scripted, bundled in Angle Planes Extension extension)
Easy Clip (scripted, bundled in Easy Clip extension)

Julien Finet

Cameras (loadable, built-in)
Colors (loadable, built-in)
Data (loadable, built-in)
Double Arrays (loadable, built-in)
Event Broker
Image Maker (cli, bundled in Image Maker extension)
Models (loadable, built-in)
Multi Volume Explorer (loadable, built-in)
Multi Volume Importer (scripted, built-in)
Scene Performance (scripted, built-in)
Threshold Scalar Volume (cli, built-in)
Tractography Display (loadable, built-in)
Transforms (loadable, built-in)
Units (loadable, built-in)
Volume Rendering (loadable, built-in)
Volumes (loadable, built-in)

Julien Jomier

Gaussian Blur Image Filter (cli, built-in)

Juliette Pera

Model To Model Distance (cli, bundled in Model To Model Distance extension)

Junichi Tokuda

Corner Annotation (scripted, bundled in Corner Annotation extension)
Curve Maker (scripted, bundled in Curve Maker extension)
Dilate Label (cli, bundled in Erode Dilate Label extension)
Erode Label (cli, bundled in Erode Dilate Label extension)
Path Explorer (loadable, bundled in Slicer IGT extension)
Percutaneous Approach Analysis (scripted, bundled in Percutaneous Approach Analysis extension)
Volume Reslice Driver (loadable, bundled in Slicer IGT extension)

K

Dicom Rt Import Plugin

Kent Williams

BRAINSDWICleanup (cli, built-in)
BRAINSTransform Convert (cli, built-in)
Convert VTK (cli, bundled in UKFTractography extension)
DWIConvert (cli, built-in)
UKFTractography (cli, bundled in UKFTractography extension)

Kent WIlliams

BRAINSStrip Rotation (cli, built-in)

Kevin Alex

Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)

Kevin Wang

Colors Scalar Bar Self Test
Contour Comparison (loadable, bundled in Slicer RT extension)
Contour Morphology (loadable, bundled in Slicer RT extension)
Contours (loadable, bundled in Slicer RT extension)
Dicom Rt Export (loadable, bundled in Slicer RT extension)
Dicom Rt Import (loadable, bundled in Slicer RT extension)
Dicom Sro Export (scripted, bundled in Slicer RT extension)
Dicom Sro Import (loadable, bundled in Slicer RT extension)
Dicom Sro Import Plugin
Dose Accumulation (loadable, bundled in Slicer RT extension)
Dose Comparison (loadable, bundled in Slicer RT extension)
Dose Morphology (loadable, bundled in Margin Calculator extension)
Dose Population Histogram (loadable, bundled in Margin Calculator extension)
Dose Volume Histogram (loadable, bundled in Slicer RT extension)
Isodose (loadable, bundled in Slicer RT extension)
Margin Calculator (scripted, bundled in Margin Calculator extension)
Matlab Commander (cli, bundled in Matlab Bridge extension)
Matlab Module Generator (loadable, bundled in Matlab Bridge extension)
Motion Simulator (loadable, bundled in Margin Calculator extension)
Motion Simulator Double Array (loadable, bundled in Margin Calculator extension)
Sequence Browser (loadable, bundled in Multidim Data extension)
Sequences (loadable, bundled in Multidim Data extension)
Synthetic RTDose (scripted, bundled in Margin Calculator extension)

Kilian Pohl

Annotations (loadable, built-in)
Change Tracker (scripted, bundled in Change Tracker extension)
EMSegment (loadable, built-in)
EMSegment Command Line (cli, built-in)
Scene Views (loadable, built-in)

Koichiro Murakami

Corner Annotation (scripted, bundled in Corner Annotation extension)
Percutaneous Approach Analysis (scripted, bundled in Percutaneous Approach Analysis extension)

Kyle Sunderl

Dvh Comparison (scripted, bundled in Slicer RT extension)

l

Dicom Rt Import Plugin

Lauren Barber

i Gyne (scripted, bundled in i Gyne extension)
Needle Finder (scripted, bundled in Needle Finder extension)

Lauren O'Donnell

Fiber Bundle Label Select (cli, built-in)
Probe Volume With Model (cli, built-in)

Laurent Chauvin

Curve Maker (scripted, bundled in Curve Maker extension)
Dice Computation (loadable, bundled in Dice Computation extension)
Path Explorer (loadable, bundled in Slicer IGT extension)
Percutaneous Approach Analysis (scripted, bundled in Percutaneous Approach Analysis extension)
Tracker Stabilizer (loadable, bundled in Tracker Stabilizer extension)

Liang-Jia Zhu

Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)

Liangjia Zhu

LAScar Segmenter (cli, bundled in LAScar Segmenter extension)

Luca Antiga

Centerline Computation (scripted, bundled in VMTK extension)
Level Set Segmentation (scripted, bundled in VMTK extension)
Surface Toolbox (scripted, built-in)
Vesselness Filtering (scripted, bundled in VMTK extension)

Lucie Macron

Mesh Statistics (scripted, bundled in Mesh Statistics Extension extension)
Pick And Paint (scripted, bundled in Pick And Paint Extension extension)
Q3DC (scripted, bundled in Q3DC extension)

Luis G. Torres

Port Placement (scripted, bundled in Port Placement extension)

Luping Fang

Gyro Guide (scripted, bundled in Gyro Guide extension)

m

Dicom Rt Import Plugin

Marc Niethammer

DWIRician LMMSEFilter (cli, built-in)

Marcel Prastawa marcel.prastawa@gmail.com

ABC (cli, bundled in ABC extension)

Mark Scully

DWIConvert (cli, built-in)

Markus Van Tol

Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)
PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)

Markus van Tol

PETIndi C (scripted, bundled in PET-Indi C extension)
PETTumor Segmentation (loadable, bundled in PETTumor Segmentation extension)
PETTumor Segmentation Effect (scripted, bundled in PETTumor Segmentation extension)
Quantitative Indices CLI (cli, bundled in PET-Indi C extension)
Quantitative Indices Tool (scripted, bundled in PET-Indi C extension)
SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)

Martin Bertran

d Pet Brain Quantification (scripted, bundled in Pet Spect Analysis extension)

Martin Styner

Convert VTK (cli, bundled in UKFTractography extension)
dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
Extract Skeleton (cli, built-in)
UKFTractography (cli, bundled in UKFTractography extension)

Mason Winsauer

Apply Matrix (cli, bundled in CMFreg extension)
Downsize (cli, bundled in CMFreg extension)
Growing (cli, bundled in CMFreg extension)
Label Addition (cli, bundled in CMFreg extension)
Label Extraction (cli, bundled in CMFreg extension)
Mask Creation (cli, bundled in CMFreg extension)
Non Growing (cli, bundled in CMFreg extension)

Matt Lougheed

Resection Volume (scripted, bundled in Resection Planner extension)
Volume Clip With Model (scripted, bundled in Volume Clip extension)

Mattea Welch

Gel Dosimetry Analysis (scripted, bundled in Gel Dosimetry Analysis extension)

Matthew Holden

Breach Warning (loadable, bundled in Slicer IGT extension)
Fiducial Registration Wizard (loadable, bundled in Slicer IGT extension)
Metafile Importer (loadable, bundled in Multidim Data extension)
Python Metrics Calculator (scripted, bundled in Perk Tutor extension)
Sequence Browser (loadable, bundled in Multidim Data extension)
Sequences (loadable, bundled in Multidim Data extension)

Matthew S. Holden

Perk Evaluator (loadable, bundled in Perk Tutor extension)
Transform Recorder (loadable, bundled in Perk Tutor extension)
Workflow Segmentation (loadable, bundled in Perk Tutor extension)

Matthew Woehlke

Extension Wizard (scripted, built-in)

Michael Jeulin-Lagarrigue

Reformat (loadable, built-in)

Minjeong Kim

IGR3D MABMIS Testing (cli, bundled in MABMIS extension)
IGR3D MABMIS Training (cli, bundled in MABMIS extension)

Nabgha Fahrat

i Gyne (scripted, bundled in i Gyne extension)
Needle Finder (scripted, bundled in Needle Finder extension)

Natalia Martinez

d Pet Brain Quantification (scripted, bundled in Pet Spect Analysis extension)

Neuro Image Resarch

Apply Matrix (cli, bundled in CMFreg extension)
Downsize (cli, bundled in CMFreg extension)
Growing (cli, bundled in CMFreg extension)
Label Addition (cli, bundled in CMFreg extension)
Label Extraction (cli, bundled in CMFreg extension)
Mask Creation (cli, bundled in CMFreg extension)
Non Growing (cli, bundled in CMFreg extension)

Nicholas Herlambang

JRC2013Vis

Nick Tustison

N4ITKBias Field Correction (cli, built-in)

Nicole Aucoin

ACPCTransform (cli, built-in)
Add Many Markups Fiducial Test
Annotations (loadable, built-in)
Cast Scalar Volume (cli, built-in)
Colors (loadable, built-in)
Colors Scalar Bar Self Test
Data (loadable, built-in)
Fiducial Layout Switch Bug1914
Grayscale Model Maker (cli, built-in)
Markups (loadable, built-in)
Markups In Compare Viewers Self Test
Markups In Views Self Test
Mask Scalar Volume (cli, built-in)
Merge Models (cli, built-in)
Model Maker (cli, built-in)
Models (loadable, built-in)
Model To Label Map (cli, built-in)
Neurosurgical Planning Tutorial Markups Self Test
PETStandard Uptake Value Computation (cli, built-in)
PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
Reporting (loadable, bundled in Reporting extension)
Scene Views (loadable, built-in)
SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
Threshold Scalar Volume (cli, built-in)
Volume Rendering Scene Close (scripted, built-in)
Volumes (loadable, built-in)

Nigel Goh

Thingiverse Browser (scripted, bundled in Thingiverse Browser extension)

Nikos Chrisochoides

Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
PBNRR (cli, bundled in PBNRR extension)

Olivier Clatz

PBNRR (cli, bundled in PBNRR extension)

p

Dicom Rt Import Plugin

Paolo Zaffino

Plastimatch Py (loadable, bundled in Slicer RT extension)

Pat Marion

Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)

Paul Mercea

Longitudinal PETCT (loadable, bundled in Longitudinal PETCT extension)

Pengdong Xiao

Intensity Segmenter (cli, bundled in Intensity Segmenter extension)

Peter Black

Change Tracker (scripted, bundled in Change Tracker extension)

Peter Karasev

Carrera Slice (loadable, bundled in Carrera Slice extension)

Peter Savadjiev

Finsler Backtracing (cli, bundled in Finsler Tractography extension)
Finsler Tractography (cli, bundled in Finsler Tractography extension)
UKFTractography (cli, bundled in UKFTractography extension)

Pierre Seroul

Extract Skeleton (cli, built-in)

Pietro Nardelli

Airway Segmentation (scripted, bundled in Airway Segmentation extension)
Airway Segmentation CLI (cli, bundled in Airway Segmentation extension)

Please direct questions or suggestions to http://groups.google.com/group/plastimatch

plastimatch slicer bspline (cli, bundled in Slicer RT extension)
plastimatch slicer landwarp (cli, bundled in Slicer RT extension)

Polina Goll

EMSegment Command Line (cli, built-in)

Qing Pan

Gyro Guide (scripted, bundled in Gyro Guide extension)

r

Dicom Rt Import Plugin

R

Dicom Rt Import Plugin

Raul San Jose

Diffusion Tensor Scalar Measurements (cli, built-in)
DWITo DTIEstimation (cli, built-in)
Tractography Label Map Seeding (cli, built-in)

Reinhard Beichel

Quantitative Indices CLI (cli, bundled in PET-Indi C extension)
Quantitative Indices Tool (scripted, bundled in PET-Indi C extension)
SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)

Reinhard R. Beichel

PETIndi C (scripted, bundled in PET-Indi C extension)

Rob MacLeod

CMRToolkit Automatic Left Atrial Scar (cli, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Inhomogeneity Correction (cli, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)
Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)

Ron Kikinis

ACPCTransform (cli, built-in)
Cast Scalar Volume (cli, built-in)
Change Tracker (scripted, bundled in Change Tracker extension)
Crop Volume (loadable, built-in)
Mask Scalar Volume (cli, built-in)
Merge Models (cli, built-in)
Model Maker (cli, built-in)
Multi Volume Explorer (loadable, built-in)
Multi Volume Importer (scripted, built-in)
N4ITKBias Field Correction (cli, built-in)
PETStandard Uptake Value Computation (cli, built-in)
PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
Robust Statistics Segmenter (cli, built-in)
Surface Toolbox (scripted, built-in)
SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
Threshold Scalar Volume (cli, built-in)
View Controllers (loadable, built-in)
Volume Rendering (loadable, built-in)

Ross Whitaker

Label Map Smoothing (cli, built-in)

Ruifeng Chen

Gyro Guide (scripted, bundled in Gyro Guide extension)

S

Dicom Rt Import Plugin
i Gyne (scripted, bundled in i Gyne extension)
Needle Finder (scripted, bundled in Needle Finder extension)

Salma Bengali

CMRToolkit Axial Dilate (cli, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Boolean REMOVEFilter (cli, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Connected Threshold Filter (cli, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Isolated Connected Filter (cli, bundled in Cardiac MRI Toolkit extension)
CMRToolkit PVAntrum Cut (cli, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Registration (scripted, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Registration BRAINSFit (scripted, bundled in Cardiac MRI Toolkit extension)
CMRToolkit Wizard (scripted, bundled in Cardiac MRI Toolkit extension)
LASegmentation Workflow (scripted, bundled in Cardiac MRI Toolkit extension)
Scar Visualization (scripted, bundled in Cardiac MRI Toolkit extension)

Sam Song

i Gyne (scripted, bundled in i Gyne extension)

Santiago Aja Fern

DWIJoint Rician LMMSEFilter (cli, built-in)
DWIRician LMMSEFilter (cli, built-in)
DWIUnbiased Non Local Means Filter (cli, built-in)

Sebastien Barré

Cameras (loadable, built-in)

Sebastien Barre

EMSegment Command Line (cli, built-in)

Shigeyuki Naka

Corner Annotation (scripted, bundled in Corner Annotation extension)

Soichiro Tani

Corner Annotation (scripted, bundled in Corner Annotation extension)

Sonia Pujol

Dice Computation (loadable, bundled in Dice Computation extension)
DTIexport (cli, built-in)
DTIimport (cli, built-in)

Stefan Lienhard

Convert VTK (cli, bundled in UKFTractography extension)
UKFTractography (cli, bundled in UKFTractography extension)

Stephen Aylward

Extract Skeleton (cli, built-in)
Gaussian Blur Image Filter (cli, built-in)

Stephen R Aylward

Expert Automated Registration (cli, built-in)

Steve Pieper

Atlas Tests
Binary Watershed Effect (scripted, bundled in IASEM extension)
Centerline Computation (scripted, bundled in VMTK extension)
Compare Volumes (scripted, built-in)
Data Probe (scripted, built-in)
DICOM (scripted, built-in)
DICOMDiffusion Volume Plugin
DICOMLongitudinal PETCTPlugin
DICOMScalar Volume Plugin
DICOMSlicer Data Bundle Plugin
Endoscopy (scripted, built-in)
fiber visibility crash2438
Fiber Bundle To Label Map (scripted, built-in)
label Toggle Bug2049
Landmark Registration (scripted, built-in)
Level Set Segmentation (scripted, bundled in VMTK extension)
Multi Volume Explorer (loadable, built-in)
Multi Volume Importer (scripted, built-in)
Performance Tests
PETTumor Segmentation Effect (scripted, bundled in PETTumor Segmentation extension)
Reporting (loadable, bundled in Reporting extension)
RSNA2012Prostate Demo
RSNAQuant Tutorial
RSNAVis Tutorial
Sample Data (scripted, built-in)
scene Import2428
Self Tests
Simple Filters (scripted, built-in)
slicer Close Crash Bug2590
Slicer MRBTest
Slicer To Kiwi Exporter (scripted, bundled in Slicer To Kiwi Exporter extension)
Threshold Threading Test
Vector To Scalar Volume (scripted, built-in)
Vesselness Filtering (scripted, bundled in VMTK extension)
View Controllers (loadable, built-in)
Volumes (loadable, built-in)

Sylvain Bouix

Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)

Sylvain Gouttard

dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)

t

Dicom Rt Import Plugin

Tamas Ungi

Breach Warning (loadable, bundled in Slicer IGT extension)
Breach Warning Self Test
Collect Fiducials (loadable, bundled in Slicer IGT extension)
Create Models (loadable, bundled in Slicer IGT extension)
Fiducial Registration Wizard (loadable, bundled in Slicer IGT extension)
Fiducials To Model Registration (scripted, bundled in Slicer IGT extension)
Model Registration (scripted, bundled in Slicer IGT extension)
Open IGTLink Remote (loadable, bundled in Slicer IGT extension)
Perk Evaluator (loadable, bundled in Perk Tutor extension)
Pivot Calibration (loadable, bundled in Slicer IGT extension)
Plus Remote (scripted, bundled in Slicer IGT extension)
Python Metrics Calculator (scripted, bundled in Perk Tutor extension)
Scoliosis Monitoring (scripted, bundled in Scoliosis extension)
Spinal Curvature Measurement (scripted, bundled in Scoliosis extension)
Transform Fusion (loadable, bundled in Slicer IGT extension)
Transform Recorder (loadable, bundled in Perk Tutor extension)
Ultrasound Snapshots (loadable, bundled in Slicer IGT extension)
Volume Reslice Driver (loadable, bundled in Slicer IGT extension)
Watchdog (loadable, bundled in Slicer IGT extension)
Watchdog Self Test
Workflow Segmentation (loadable, bundled in Perk Tutor extension)

the University of North Carolina at Chapel Hill

Intensity Segmenter (cli, bundled in Intensity Segmenter extension)

Thomas Lawson

Wasp (scripted, bundled in Wasp extension)

Tina Kapur

i Gyne (scripted, bundled in i Gyne extension)
Needle Finder (scripted, bundled in Needle Finder extension)

Tobias Penzkofer

i Gyne (scripted, bundled in i Gyne extension)

Tohru Tani

Corner Annotation (scripted, bundled in Corner Annotation extension)

UNC Medical School

Apply Matrix (cli, bundled in CMFreg extension)
Downsize (cli, bundled in CMFreg extension)
Growing (cli, bundled in CMFreg extension)
Label Addition (cli, bundled in CMFreg extension)
Label Extraction (cli, bundled in CMFreg extension)
Mask Creation (cli, bundled in CMFreg extension)
Non Growing (cli, bundled in CMFreg extension)

UofM School Of Dentistry

Growing (cli, bundled in CMFreg extension)

UofM School of Dentistry

Apply Matrix (cli, bundled in CMFreg extension)
Downsize (cli, bundled in CMFreg extension)
Label Addition (cli, bundled in CMFreg extension)
Label Extraction (cli, bundled in CMFreg extension)
Mask Creation (cli, bundled in CMFreg extension)
Non Growing (cli, bundled in CMFreg extension)

Vince Magnotta

DWIConvert (cli, built-in)

Vincent A. Magnotta

BRAINSLabel Stats (cli, built-in)

Vincent Magnotta

BRAINSResample (cli, built-in)

Vinicius Boen

Apply Matrix (cli, bundled in CMFreg extension)
Downsize (cli, bundled in CMFreg extension)
Growing (cli, bundled in CMFreg extension)
Label Addition (cli, bundled in CMFreg extension)
Label Extraction (cli, bundled in CMFreg extension)
Mask Creation (cli, bundled in CMFreg extension)
Non Growing (cli, bundled in CMFreg extension)
Surface Registration (scripted, bundled in CMFreg extension)

Vivek Narayan

Heterogeneity CAD (scripted, bundled in Open CAD extension)
Segment CAD (scripted, bundled in Open CAD extension)

Wendy Plesniak

Annotations (loadable, built-in)
PETStandard Uptake Value Computation (cli, built-in)
PETSUVImage Maker (cli, bundled in Longitudinal PETCT extension)
Scene Views (loadable, built-in)
SUVFactor Calculator (cli, bundled in PETDICOMExtension extension)
View Controllers (loadable, built-in)
Welcome (loadable, built-in)

Xiaodong Tao

DWIConvert (cli, built-in)
Model To Label Map (cli, built-in)

Xiaofeng Liu

IGR3D MABMIS Testing (cli, bundled in MABMIS extension)
IGR3D MABMIS Training (cli, bundled in MABMIS extension)

Xiaojun Chen

i Gyne (scripted, bundled in i Gyne extension)

y Wells

i Gyne (scripted, bundled in i Gyne extension)
Needle Finder (scripted, bundled in Needle Finder extension)

Yanling Liu

Volume Rendering (loadable, built-in)

Yi Gao

i Gyne (scripted, bundled in i Gyne extension)
LAScar Segmenter (cli, bundled in LAScar Segmenter extension)
Needle Finder (scripted, bundled in Needle Finder extension)
Robust Statistics Segmenter (cli, built-in)
Segmentation Aided Registration (cli, bundled in Segmentation Aided Registration extension)

Yinglin Lee

Test Grid Transform Registration (cli, built-in)

Yingxuan Zhu

Pk Modeling (cli, bundled in Pk Modeling extension)

Yinpeng Li

Convert VTK (cli, bundled in UKFTractography extension)
UKFTractography (cli, bundled in UKFTractography extension)

Yixun Liu

Body Centric Cubic Mesh (cli, bundled in CBC 3D I2MConversion extension)
Mesh Compression (cli, bundled in CBC 3D I2MConversion extension)
PBNRR (cli, bundled in PBNRR extension)

Yogesh Rathi

Convert VTK (cli, bundled in UKFTractography extension)
UKFTractography (cli, bundled in UKFTractography extension)

Yong Zhang

Annotations (loadable, built-in)

Yumin Yuan

EMSegment Command Line (cli, built-in)

Yundi Shi

Convert VTK (cli, bundled in UKFTractography extension)
dtitractstat (cli, bundled in DTIAtlas Fiber Analyzer extension)
UKFTractography (cli, bundled in UKFTractography extension)

@@ Line 2: / Line 2: @@
 * [[#Modules_by_contributing_individual|Modules by contributing individual]]
 = Modules by contributing individual =
 contributing individuals:
 * [[#.2F|/]]
 * [[#a|a]]
@@ Line 69: / Line 69: @@
 * [[#http:.2F.2Fwww.psychiatry.uiowa.edu|http://www.psychiatry.uiowa.edu]]
 * [[#i|i]]
-* [[#Ipek_Oguz|Ipek Oguz]]
+* [[#Ipek_Oguz|Ipek Oguz]]    <small>(University of Iowa)</small>
 * [[#Ivan_Kolesov|Ivan Kolesov]]    <small>(Stony Brook University)</small>
 * [[#Jaime_Garcia-Guevara|Jaime Garcia-Guevara]]    <small>(Queen's University)</small>
@@ Line 75: / Line 75: @@
 * [[#Jayender_Jagadeesan|Jayender Jagadeesan]]    <small>(BWH)</small>
 * [[#Jean-Baptiste_Berger|Jean-Baptiste Berger]]    <small>(Kitware)</small>
+* [[#Jean-Baptiste_VIMORT|Jean-Baptiste VIMORT]]    <small>(University of Michigan)</small>
+* [[#Jean-Baptiste_Vimort|Jean-Baptiste Vimort]]    <small>(University of Michigan)</small>
 * [[#Jean-Christophe_Fillion-Robin|Jean-Christophe Fillion-Robin]]    <small>(Kitware)</small>
 * [[#Jennifer_Andrea|Jennifer Andrea]]    <small>(PerkLab, Queen's University)</small>
@@ Line 174: / Line 176: @@
 * [[#Tamas_Ungi|Tamas Ungi]]    <small>(PerkLab, Queen's Universit)</small>
 * [[#the_University_of_North_Carolina_at_Chapel_Hill|the University of North Carolina at Chapel Hill]]    <small>(UNC)</small>
+* [[#Thomas_Lawson|Thomas Lawson]]    <small>(MRC Harwell, Oxfordshire)</small>
 * [[#Tina_Kapur|Tina Kapur]]
 * [[#Tobias_Penzkofer|Tobias Penzkofer]]
@@ Line 221: / Line 224: @@
 * [[Documentation/4.4/Modules/LASegmentationWorkflow|LASegmentation Workflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 * [[Documentation/4.4/Modules/ScarVisualization|Scar Visualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
-* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
+* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 == Alex Yarmakovich ==
 * [[Documentation/4.4/Modules/Models|Models]]    <small>(loadable, built-in)</small>
@@ Line 243: / Line 246: @@
 * [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 * [[Documentation/4.4/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli, built-in)</small>
-* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
+* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 * [[Documentation/4.4/Modules/SobolevSegmenter|Sobolev Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]] extension)</small>
 == Alvaro Gomez ==
@@ Line 268: / Line 271: @@
 * [[Documentation/4.4/Modules/DoseComparison|Dose Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 * [[Documentation/4.4/Modules/DoseVolumeHistogram|Dose Volume Histogram]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
-* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DeveloperToolsForExtensions Extension Stats]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DeveloperToolsForExtensions Developer Tools For Extensions] extension)</small>
+* [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/DeveloperToolsForExtensions Extension Stats]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/DeveloperToolsForExtensions Developer Tools For Extensions] extension)</small>
 * [[Documentation/4.4/Modules/Isodose|Isodose]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 * [[Documentation/4.4/Modules/MatlabCommander|Matlab Commander]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
@@ Line 275: / Line 278: @@
 * [[Documentation/4.4/Extensions/SlicerIGT|Model Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 * [[Documentation/4.4/Modules/PlusRemote|Plus Remote]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
-* [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] extension)</small>
 * [[Documentation/4.4/Extensions/MultidimData|Sequence Browser]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 * [[Documentation/4.4/Extensions/MultidimData|Sequences]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
@@ Line 305: / Line 307: @@
 * [[Documentation/4.4/Extensions/Reporting|Reporting]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 * Reporting Self Test
-* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
+* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 * [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] extension)</small>
 * [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small>
@@ Line 391: / Line 393: @@
 * [[Documentation/4.4/Modules/QuantitativeIndicesCLI|Quantitative Indices CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 * [[Documentation/4.4/Extensions/PET-IndiC|Quantitative Indices Tool]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
-* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
+* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 == Christian Baumgartner ==
 * [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
@@ Line 409: / Line 411: @@
 * [[Documentation/4.4/Modules/DoseVolumeHistogram|Dose Volume Histogram]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 * [[Documentation/4.4/Extensions/SlicerRT|Dvh Comparison]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
-* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
+* [http://www.slicer.org/wiki/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
-* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo]    <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
+* [http://www.slicer.org/wiki/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo]    <small>(loadable, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 * [[Documentation/4.4/Modules/Isodose|Isodose]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 * NAMIC Tutorial 2013June Self Test
@@ Line 432: / Line 434: @@
 * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 * [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
-* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
+* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 == Demian Wassermann ==
 * DICOM2Full Brain Tractography    <small>(scripted, built-in)</small>
@@ Line 451: / Line 453: @@
 * Dicom Rt Import Plugin
 == er ==
-* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
+* [http://www.slicer.org/wiki/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 == Ethan Ulrich ==
 * [[Documentation/4.4/Modules/DICOMPETSUVPlugin|DICOMPETSUVPlugin]]
@@ Line 458: / Line 460: @@
 * [[Documentation/4.4/Modules/QuantitativeIndicesCLI|Quantitative Indices CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 * [[Documentation/4.4/Extensions/PET-IndiC|Quantitative Indices Tool]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
-* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
+* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 == Eugene Kholmovski ==
 * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
@@ Line 470: / Line 472: @@
 * [[Documentation/4.4/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small>
 == Francois Budin ==
-* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DeveloperToolsForExtensions Developer Tools For Extensions]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DeveloperToolsForExtensions Developer Tools For Extensions] extension)</small>
+* [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/AnglePlanes Angle Planes]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/AnglePlanes Angle Planes Extension] extension)</small>
+* [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/DeveloperToolsForExtensions Developer Tools For Extensions]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/DeveloperToolsForExtensions Developer Tools For Extensions] extension)</small>
 * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
@@ Line 476: / Line 479: @@
 * [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]] extension)</small>
 * [[Documentation/4.4/Extensions/ModelToModelDistance|Model To Model Distance]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ModelToModelDistance|Model To Model Distance]] extension)</small>
-* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ResampleDTIlogEuclidean Resample DTIlog Euclidean]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/ResampleDTIlogEuclidean Resample DTIlog Euclidean] extension)</small>
+* [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/ResampleDTIlogEuclidean Resample DTIlog Euclidean]    <small>(cli, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/ResampleDTIlogEuclidean Resample DTIlog Euclidean] extension)</small>
 * [[Documentation/4.4/Modules/ResampleDTIVolume|Resample DTIVolume]]    <small>(cli, built-in)</small>
 * [[Documentation/4.4/Modules/ResampleScalarVectorDWIVolume|Resample Scalar Vector DWIVolume]]    <small>(cli, built-in)</small>
@@ Line 492: / Line 495: @@
 * [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 * [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
-* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
+* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 == Greg Harris ==
 * [[Documentation/4.4/Modules/BRAINSDemonWarp|BRAINSDemon Warp]]    <small>(cli, built-in)</small>
@@ Line 522: / Line 525: @@
 * DWIConvert    <small>(cli, built-in)</small>
 * [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
-* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
+* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 * [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 == hans-johnson -at- uiowa.edu ==
@@ Line 537: / Line 540: @@
 * [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 == Ivan Kolesov ==
-* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
+* [http://wiki.slicer.org/wiki/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]    <small>(loadable, bundled in [http://wiki.slicer.org/wiki/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 == Jaime Garcia-Guevara ==
 * [[Documentation/4.4/Extensions/SlicerIGT|Watchdog]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
@@ Line 551: / Line 554: @@
 * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Fiber Compare]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Merge Stat With Fiber]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
+== Jean-Baptiste VIMORT ==
+* [[Documentation/4.4/Modules/SurfaceRegistration|Surface Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
+== Jean-Baptiste Vimort ==
+* [[Documentation/4.4/Extensions/EasyClip|Easy Clip]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/EasyClip|Easy Clip]] extension)</small>
+* [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/PickAndPaint Pick And Paint]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/PickAndPaint Pick And Paint Extension] extension)</small>
 == Jean-Christophe Fillion-Robin ==
 * CLI4Test
 * [[Documentation/4.4/Modules/DataStore|Data Store]]    <small>(loadable, built-in)</small>
-* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DeveloperToolsForExtensions Extension Stats]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DeveloperToolsForExtensions Developer Tools For Extensions] extension)</small>
+* [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/DeveloperToolsForExtensions Extension Stats]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/DeveloperToolsForExtensions Developer Tools For Extensions] extension)</small>
-* [[Documentation/4.4/Modules/FastGrowCut|Fast Grow Cut]]    <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small>
+* [[Documentation/4.4/Modules/FastGrowCut|Fast Grow Cut]]    <small>(loadable, bundled in [https://www.slicer.org/wiki/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small>
-* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
+* [http://wiki.slicer.org/wiki/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter]    <small>(loadable, bundled in [http://wiki.slicer.org/wiki/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 * fiber visibility crash2438
 * label Toggle Bug2049
@@ Line 570: / Line 578: @@
 * [[Documentation/4.4/Modules/Welcome|Welcome]]    <small>(loadable, built-in)</small>
 == Jennifer Andrea ==
-* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
+* [http://www.slicer.org/wiki/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 * [[Documentation/4.4/Extensions/SlicerRT|Vff File Reader]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 == Jessica Forbes ==
@@ Line 588: / Line 596: @@
 * [[Documentation/4.4/Modules/QuantitativeIndicesCLI|Quantitative Indices CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 * [[Documentation/4.4/Extensions/PET-IndiC|Quantitative Indices Tool]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
-* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
+* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 == John Evans ==
 * [[Documentation/4.4/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small>
@@ Line 608: / Line 616: @@
 * [[Documentation/4.4/Modules/LASegmentationWorkflow|LASegmentation Workflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 * [[Documentation/4.4/Modules/ScarVisualization|Scar Visualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
-* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
+* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 == Joy Matsui ==
 * DWIConvert    <small>(cli, built-in)</small>
 == Juan Carlos Prieto ==
-* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AnglePlanes Angle Planes]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AnglePlanes Angle Planes Extension] extension)</small>
+* [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/AnglePlanes Angle Planes]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/AnglePlanes Angle Planes Extension] extension)</small>
 == Julia Lopinto ==
-* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AnglePlanes Angle Planes]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AnglePlanes Angle Planes Extension] extension)</small>
+* [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/AnglePlanes Angle Planes]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/AnglePlanes Angle Planes Extension] extension)</small>
-* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/EasyClip Easy Clip]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/EasyClip Easy Clip] extension)</small>
+* [[Documentation/4.4/Extensions/EasyClip|Easy Clip]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/EasyClip|Easy Clip]] extension)</small>
 == Julien Finet ==
 * [[Documentation/4.4/Modules/Cameras|Cameras]]    <small>(loadable, built-in)</small>
@@ Line 656: / Line 664: @@
 * BRAINSStrip Rotation    <small>(cli, built-in)</small>
 == Kevin Alex ==
-* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
+* [http://www.slicer.org/wiki/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 == Kevin Wang ==
 * Colors Scalar Bar Self Test
@@ Line 669: / Line 677: @@
 * [[Documentation/4.4/Modules/DoseAccumulation|Dose Accumulation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 * [[Documentation/4.4/Modules/DoseComparison|Dose Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
+* [[Documentation/4.4/Extensions/MarginCalculator|Dose Morphology]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
+* [[Documentation/4.4/Extensions/MarginCalculator|Dose Population Histogram]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
 * [[Documentation/4.4/Modules/DoseVolumeHistogram|Dose Volume Histogram]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 * [[Documentation/4.4/Modules/Isodose|Isodose]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
+* [[Documentation/4.4/Extensions/MarginCalculator|Margin Calculator]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
 * [[Documentation/4.4/Modules/MatlabCommander|Matlab Commander]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 * [[Documentation/4.4/Modules/MatlabModuleGenerator|Matlab Module Generator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
+* [[Documentation/4.4/Extensions/MarginCalculator|Motion Simulator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
+* [[Documentation/4.4/Extensions/MarginCalculator|Motion Simulator Double Array]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
 * [[Documentation/4.4/Extensions/MultidimData|Sequence Browser]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 * [[Documentation/4.4/Extensions/MultidimData|Sequences]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
+* [[Documentation/4.4/Extensions/MarginCalculator|Synthetic RTDose]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
 == Kilian Pohl ==
 * [[Documentation/4.4/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
@@ Line 701: / Line 715: @@
 * [[Documentation/4.4/Modules/TrackerStabilizer|Tracker Stabilizer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small>
 == Liang-Jia Zhu ==
-* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
+* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 == Liangjia Zhu ==
 * [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
@@ Line 710: / Line 724: @@
 * [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 == Lucie Macron ==
-* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MeshStatistics Mesh Statistics]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/MeshStatistics Mesh Statistics Extension] extension)</small>
+* [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/MeshStatistics Mesh Statistics]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/MeshStatistics Mesh Statistics Extension] extension)</small>
-* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PickAndPaint Pick And Paint]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PickAndPaint Pick And Paint Extension] extension)</small>
+* [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/PickAndPaint Pick And Paint]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/PickAndPaint Pick And Paint Extension] extension)</small>
-* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/Q3DC Q3DC]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/Q3DC Q3DC] extension)</small>
+* [[Documentation/4.4/Extensions/Q3DC|Q3DC]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Q3DC|Q3DC]] extension)</small>
 == Luis G. Torres ==
 * [[Documentation/4.4/Modules/PortPlacement|Port Placement]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PortPlacement|Port Placement]] extension)</small>
@@ Line 734: / Line 748: @@
 * [[Documentation/4.4/Modules/QuantitativeIndicesCLI|Quantitative Indices CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 * [[Documentation/4.4/Extensions/PET-IndiC|Quantitative Indices Tool]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
-* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
+* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 == Martin Bertran ==
 * [[Documentation/4.4/Modules/dPetBrainQuantification|d Pet Brain Quantification]]    <small>(scripted, bundled in [http://gti-fing.github.io/SlicerPetSpectAnalysis Pet Spect Analysis] extension)</small>
@@ Line 754: / Line 768: @@
 * [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Model]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small>
 == Mattea Welch ==
-* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
+* [http://www.slicer.org/wiki/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 == Matthew Holden ==
 * [[Documentation/4.4/Extensions/SlicerIGT|Breach Warning]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
@@ Line 813: / Line 827: @@
 * [[Documentation/4.4/Extensions/Reporting|Reporting]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 * [[Documentation/4.4/Modules/SceneViews|Scene Views]]    <small>(loadable, built-in)</small>
-* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
+* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 * [[Documentation/4.4/Modules/ThresholdScalarVolume|Threshold Scalar Volume]]    <small>(cli, built-in)</small>
 * Volume Rendering Scene Close    <small>(scripted, built-in)</small>
@@ Line 838: / Line 852: @@
 * [[Documentation/4.4/Modules/ChangeTracker|Change Tracker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 == Peter Karasev ==
-* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
+* [http://wiki.slicer.org/wiki/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]    <small>(loadable, bundled in [http://wiki.slicer.org/wiki/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 == Peter Savadjiev ==
 * [[Documentation/4.4/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
@@ Line 846: / Line 860: @@
 * [[Documentation/4.4/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli, built-in)</small>
 == Pietro Nardelli ==
-* [[Documentation/4.4/Modules/AirwaySegmentation|Airway Segmentation]]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation] extension)</small>
+* [[Documentation/4.4/Modules/AirwaySegmentation|Airway Segmentation]]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation] extension)</small>
 * [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation]] extension)</small>
 == Please direct questions or suggestions to http://groups.google.com/group/plastimatch ==
@@ Line 866: / Line 880: @@
 * [[Documentation/4.4/Modules/QuantitativeIndicesCLI|Quantitative Indices CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 * [[Documentation/4.4/Extensions/PET-IndiC|Quantitative Indices Tool]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
-* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
+* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 == Reinhard R. Beichel ==
 * [[Documentation/4.4/Extensions/PET-IndiC|PETIndi C]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
@@ Line 883: / Line 897: @@
 * [[Documentation/4.4/Modules/LASegmentationWorkflow|LASegmentation Workflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 * [[Documentation/4.4/Modules/ScarVisualization|Scar Visualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
-* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
+* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 == Ron Kikinis ==
 * [[Documentation/4.4/Modules/ACPCTransform|ACPCTransform]]    <small>(cli, built-in)</small>
@@ Line 899: / Line 913: @@
 * [[Documentation/4.4/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli, built-in)</small>
 * [[Documentation/4.4/Modules/SurfaceToolbox|Surface Toolbox]]    <small>(scripted, built-in)</small>
-* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
+* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 * [[Documentation/4.4/Modules/ThresholdScalarVolume|Threshold Scalar Volume]]    <small>(cli, built-in)</small>
 * [[Documentation/4.4/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
@@ Line 952: / Line 966: @@
 * [[Documentation/4.4/Extensions/IASEM|Binary Watershed Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 * [http://slicer.vmtk.org/ Centerline Computation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
-* [[Documentation/4.4/Modules/CompareVolumes|Compare Volumes]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
+* [[Documentation/4.4/Modules/CompareVolumes|Compare Volumes]]    <small>(scripted, built-in)</small>
 * [[Documentation/4.4/Modules/DataProbe|Data Probe]]    <small>(scripted, built-in)</small>
 * [[Documentation/4.4/Modules/DICOM|DICOM]]    <small>(scripted, built-in)</small>
@@ Line 963: / Line 977: @@
 * [[Documentation/4.4/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]]    <small>(scripted, built-in)</small>
 * label Toggle Bug2049
-* [[Documentation/4.4/Modules/LandmarkRegistration|Landmark Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
+* [[Documentation/4.4/Modules/LandmarkRegistration|Landmark Registration]]    <small>(scripted, built-in)</small>
 * [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 * [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
@@ Line 986: / Line 1,000: @@
 * [[Documentation/4.4/Modules/Volumes|Volumes]]    <small>(loadable, built-in)</small>
 == Sylvain Bouix ==
-* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
+* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 == Sylvain Gouttard ==
 * [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
@@ Line 1,015: / Line 1,029: @@
 == the University of North Carolina at Chapel Hill ==
 * [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small>
+== Thomas Lawson ==
+* [https://github.com/Tomnl/Slicer-Wasp Wasp]    <small>(scripted, bundled in [https://github.com/Tomnl/Slicer-Wasp Wasp] extension)</small>
 == Tina Kapur ==
 * [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
@@ Line 1,053: / Line 1,069: @@
 * [[Documentation/4.4/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 * [[Documentation/4.4/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
-* [[Documentation/4.4/Extensions/CMFreg|Surface Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
+* [[Documentation/4.4/Modules/SurfaceRegistration|Surface Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 == Vivek Narayan ==
 * [[Documentation/4.4/Modules/HeterogeneityCAD|Heterogeneity CAD]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small>
@@ Line 1,062: / Line 1,078: @@
 * [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 * [[Documentation/4.4/Modules/SceneViews|Scene Views]]    <small>(loadable, built-in)</small>
-* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
+* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 * [[Documentation/4.4/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 * [[Documentation/4.4/Modules/Welcome|Welcome]]    <small>(loadable, built-in)</small>
@@ Line 1,083: / Line 1,099: @@
 * [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 * [[Documentation/4.4/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli, built-in)</small>
-* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
+* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 == Yinglin Lee ==
 * Test Grid Transform Registration    <small>(cli, built-in)</small>

Difference between revisions of "Documentation/4.4/ModuleExtensionListing/Modules by contributing individual"

Latest revision as of 17:32, 21 November 2019

Modules by contributing individual

/

a

Akila Viswanathan

Alan Morris

Alex Yarmakovich

Alex Yarmarkovich

Ali Ghayoor

Alireza Mehrtash

Allen Tannenbaum

Alvaro Gomez

Amelie Meyer

Analysis Laboratory

Andinet Enquobahrie

Andras Lasso

Andreas Freudling

Andrey Fedorov

Andriy Kot

Anonymous

Antonio Damato

Antonio Tristan Vega

Anuja Sharma

Arie Nakhmani

Atsushi Yamada

Beatriz Paniagua from Department of Orthodontics

Benjamin Long

Benjamin Yvernault

Bill Lorensen

Brad Davis

Bradley Lowekamp

Brian Zenger

BWH

c

Carl-Fredrik Westin

Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez

Casey B Goodlett

Charles Marion

Christian Bauer

Christian Baumgartner

Csaba Pinter

Daniel Blezek

Daniel Haehn

Danny Perry

Demian Wassermann

Dinggang Shen

Dirk Padfield

Dominik Meier

e

er

Ethan Ulrich

Eugene Kholmovski

ez

Fotis Drakopoulos

Francois Budin

Franklin King

Greg Gardner

Greg Harris

Greg Sharp

Gregory Sharp

Guido Gerig

Guillaume Pernelle

Guillermo Carbajal

Hans J. Johnson

Hans Johnson

hans-johnson -at- uiowa.edu

http://www.psychiatry.uiowa.edu

i

Ipek Oguz

Ivan Kolesov

Jaime Garcia-Guevara

Jan Egger

Jayender Jagadeesan

Jean-Baptiste Berger

Jean-Baptiste VIMORT

Jean-Baptiste Vimort

Jean-Christophe Fillion-Robin

Jennifer Andrea

Jessica Forbes