Documentation/4.4/ModuleExtensionListing

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List of extensions known to be broken

Modules by name

218 modules:

Modules by category

37 categories:

BRAINS

LabelStatistics

  • BRAINSLabel Stats (cli, built-in)

Cardiac MRI Toolkit

CMF Registration

Voxelbase Registration

Converters

Developer Tools

DICOM Plugins

  • DICOMLongitudinal PETCTPlugin
  • DICOMRWVMPlugin
  • Multi Volume Importer Plugin
  • DICOMPETSUVPlugin
  • Dicom Rt Import Plugin
  • DICOMDiffusion Volume Plugin
  • DICOMSegmentation Plugin
  • Dicom Sro Import Plugin
  • DICOMScalar Volume Plugin
  • DICOMSlicer Data Bundle Plugin

Editor Extensions

Matlab

Diffusion

Diffusion Data Conversion

  • DWIConvert (cli, built-in)

Diffusion Tensor Images

Diffusion Weighted Images

FiberAnalysis

Tractography

Editor Effects

EditorEffect

Endoscopy

Examples

Exporter

File

Filtering

Arithmetic

Denoising

Morphology

IGT

Informatics

Legacy

Converters

Diffusion

Denoising

Diffusion Data Conversion

  • DTIimport (cli, built-in)
  • DTIexport (cli, built-in)

Filtering

Registration

Work in Progress

Diffusion Tensor

Test
  • Diffusion Tensor Test (cli, built-in)

Mesh Generation

MeshGeneration

Microscopy

Multidimensional data

MultiVolume Support

Perk Tutor

Plastimatch

Registration

Utilities

Quantification

ChangeQuantification

Radiotherapy

Registration

Specialized

Segmentation

Specialized

Shape Analysis

Slicelets

Surface Models

Testing

  • Self Tests
  • CLIROITest (cli, built-in)
  • CLI4Test
  • Threshold Threading Test
  • Scoliosis Monitoring (scripted, bundled in Scoliosis extension)
  • Performance Tests
  • Slicer MRBTest

IGT Tests

  • Breach Warning Self Test
  • Watchdog Self Test

SlicerRT Tests

TestCases

  • Slice Link Logic (scripted, built-in)
  • Atlas Tests
  • RSNAQuant Tutorial
  • Volume Rendering Scene Close (scripted, built-in)
  • test tractography display
  • slicer Close Crash Bug2590
  • Subject Hierarchy Generic Self Test
  • View Controllers Slice Interpolation Bug1926
  • Charting (scripted, built-in)
  • Scene Performance (scripted, built-in)
  • Neurosurgical Planning Tutorial Markups Self Test
  • Markups In Compare Viewers Self Test
  • Cardiac Agatston Measures (scripted, bundled in Cardiac Agaston Measures extension)
  • fiber visibility crash2438
  • scene Import2428
  • RSNAVis Tutorial
  • JRC2013Vis
  • RSNA2012Prostate Demo
  • Add Many Markups Fiducial Test
  • Colors Scalar Bar Self Test
  • Markups In Views Self Test
  • Subject Hierarchy Core Plugins Self Test
  • Change Tracker Self Test
  • Fiducial Layout Switch Bug1914
  • Slicer4Minute (scripted, built-in)
  • label Toggle Bug2049

Unspecified

  • BRAINSDWICleanup (cli, built-in)

Utilities

BRAINS

  • BRAINSTransform Convert (cli, built-in)

Vascular Modeling Toolkit

Wizards

Work in Progress

Converters

Informatics

TestCases

  • Reporting Self Test
  • Label To DICOMSEGConverter Self Test

XNATSlicer

Modules by contributing organization

73 contributing organizations:

Asclepios INRIA

AZE R&D

  • JRC2013Vis

Boston Children's Hospital

Brigham and Women's Hospital

BWH

BWH, SPL

BWH, SUMS

BWH/UAB

CARMA

College of Information Engineering, Zhejiang University of Technology, Hangzhou, China); Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China

CRTC

gatech

GE

Georgia Tech

IBM

Isomics

Isomics Inc.

  • DICOMDiffusion Volume Plugin
  • DICOMLongitudinal PETCTPlugin
  • DICOMScalar Volume Plugin
  • DICOMSlicer Data Bundle Plugin
  • Slicer MRBTest
  • Threshold Threading Test

Isomics, pieper@isomics.com

Kingston General Hospital

Kitware

Kitware)

MGH

MGH, Boston

Moka Creative, LLC, kumar.sunil.p@gmail.com

MSC/NLM

Noware

Orobix

PerkLab at Queen's University

PerkLab, Queen's

PerkLab, Queen's Universit

PerkLab, Queen's University

PMH

PMH, Toronto

Princess Margaret Cancer Centre

Queen's

Queen's Universit

Queen's University

Queen's University) Jaime Garcia-Guevara (Queen's University

  • Breach Warning Self Test
  • Watchdog Self Test

Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto

RMP, PMH

  • Dicom Sro Import Plugin

SAIC-Frederick, NCI-Frederick

SBU

SCI Institute

Shiga University of Medical Science

Shiga University of Medical Science in Japan

Shiga University of Medical Science, Japan, SPL

SINAPSE

SNR

SPL

SPL B&W Harvard

SPL, BWH

SPL, BWH, UPenn

SUMS

Surgical Planning Lab

UAB

UHN, Toronto

Uiowa

  • DWIConvert (cli, built-in)

UIowa

  • DWIConvert (cli, built-in)

UNC

Univ of Michigan

Univ. of Iowa

University 'Magna Graecia' of Catanzaro

University College Cork

University of Heidelberg

University of Iowa

University of Iowa) and Andrey Fedorov (SPL

UPenn

Utah

UVa

UWA

WashU-St. Louis, dmarcus@wustl.edu

while at GE

Modules by contributing individual

191 contributing individuals:

/

  • Dicom Rt Import Plugin

a

  • Dicom Rt Import Plugin

Akila Viswanathan

Alan Morris

Alex Yarmakovich

  • Models (loadable, built-in)
  • Tractography Interactive Seeding (loadable, built-in)

Alex Yarmarkovich

Ali Ghayoor

  • BRAINSTransform Convert (cli, built-in)
  • Perform Metric Test (cli, built-in)

Alireza Mehrtash

Allen Tannenbaum

Amelie Meyer

Analysis Laboratory

Andinet Enquobahrie

Andras Lasso

Andreas Freudling

Andrey Fedorov

Andriy Kot

Anonymous

  • CLIROITest (cli, built-in)
  • EMSegment Transform To New Format (cli, built-in)

Antonio Damato

Antonio Tristan Vega

Anuja Sharma

Arie Nakhmani

Atsushi Yamada

Beatriz Paniagua from Department of Orthodontics

Benjamin Long

Benjamin Yvernault

Bill Lorensen

Brad Davis

  • EMSegment Command Line (cli, built-in)

Bradley Lowekamp

Brian Zenger

BWH

  • DICOMSegmentation Plugin
  • Multi Volume Importer Plugin

c

  • Dicom Rt Import Plugin

Carl-Fredrik Westin

Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez

Casey B Goodlett

Charles Marion

Christian Bauer

Christian Baumgartner

Csaba Pinter

Dan Marcus

Daniel Blezek

Daniel Haehn

Danny Perry

Demian Wassermann

Dinggang Shen

Dirk Padfield

Dominik Meier

e

  • Dicom Rt Import Plugin

er

Ethan Ulrich

Eugene Kholmovski

ez

Fotis Drakopoulos

Francois Budin

Franklin King

Greg Gardner

Greg Harris

Greg Sharp

Gregory Sharp

Guido Gerig

Guillaume Pernelle

Hans J. Johnson

  • BRAINSDemon Warp (cli, built-in)
  • BRAINSFit (cli, built-in)
  • BRAINSROIAuto (cli, built-in)
  • BRAINSTransform Convert (cli, built-in)
  • VBRAINSDemon Warp (cli, built-in)

Hans Johnson

hans-johnson -at- uiowa.edu

  • BRAINSFit (cli, built-in)
  • BRAINSROIAuto (cli, built-in)

http://www.psychiatry.uiowa.edu

  • BRAINSFit (cli, built-in)
  • BRAINSROIAuto (cli, built-in)

i

  • Dicom Rt Import Plugin

Ipek Oguz

Ivan Kolesov

Jaime Garcia-Guevara

Jan Egger

Jayender Jagadeesan

Jean-Baptiste Berger

Jean-Christophe Fillion-Robin

Jennifer Andrea

Jessica Forbes

Jim Miller

Johan Andruejol

  • Units (loadable, built-in)

John Buatti

John Evans

Jonathan Bronson

Josh Cates

Joy Matsui

  • DWIConvert (cli, built-in)

Julien Finet

Julien Jomier

Junichi Tokuda

K

  • Dicom Rt Import Plugin

Kent Williams

Kent WIlliams

  • BRAINSStrip Rotation (cli, built-in)

Kevin Alex

Kevin Wang

Kilian Pohl

Koichiro Murakami

Kyle Sunderl

l

  • Dicom Rt Import Plugin

Lauren Barber

Lauren O'Donnell

Laurent Chauvin

Liang-Jia Zhu

Liangjia Zhu

Luca Antiga

Luis G. Torres

Luping Fang

m

  • Dicom Rt Import Plugin

Marc Niethammer

Marcel Prastawa prastawa@sci.utah.edu

  • ABC (cli, bundled in ABC extension)

Mark Scully

  • DWIConvert (cli, built-in)

Markus Van Tol

Markus van Tol

Martin Styner

Mason Winsauer

Matt Lougheed

Mattea Welch

Matthew Holden

Matthew S. Holden

Matthew Woehlke

Michael Jeulin-Lagarrigue

Minjeong Kim

Nabgha Fahrat

Neuro Image Resarch

Nicholas Herlambang

  • JRC2013Vis

Nick Tustison

Nicole Aucoin

Nigel Goh

Nikos Chrisochoides

Olivier Clatz

p

  • Dicom Rt Import Plugin

Paolo Zaffino

Pat Marion

Paul Mercea

Pengdong Xiao

Peter Black

Peter Karasev

Peter Savadjiev

Pierre Seroul

Pietro Nardelli

Please direct questions or suggestions to http://groups.google.com/group/plastimatch

Polina Goll

  • EMSegment Command Line (cli, built-in)

Qing Pan

r

  • Dicom Rt Import Plugin

R

  • Dicom Rt Import Plugin

Raul San Jose

Reinhard Beichel

Reinhard R. Beichel

Rob MacLeod

Ron Kikinis

Ross Whitaker

Ruifeng Chen

S

Salma Bengali

Sam Song

Santiago Aja Fern

Sebastien Barré

Sebastien Barre

  • EMSegment Command Line (cli, built-in)

Shigeyuki Naka

Soichiro Tani

Sonia Pujol

Stefan Lienhard

Stephen Aylward

Stephen R Aylward

Steve Pieper

Sunil Kumar

Sylvain Bouix

Sylvain Gouttard

t

  • Dicom Rt Import Plugin

Tamas Ungi

the University of North Carolina at Chapel Hill

Tina Kapur

Tobias Penzkofer

Tohru Tani

UNC Medical School

UofM School Of Dentistry

UofM School of Dentistry

Vince Magnotta

  • DWIConvert (cli, built-in)

Vincent A. Magnotta

  • BRAINSLabel Stats (cli, built-in)

Vincent Magnotta

Vinicius Boen

Vivek Narayan

Wendy Plesniak

Xiaodong Tao

Xiaofeng Liu

Xiaojun Chen

y Wells

Yanling Liu

Yi Gao

Yinglin Lee

  • Test Grid Transform Registration (cli, built-in)

Yingxuan Zhu

Yinpeng Li

Yixun Liu

Yogesh Rathi

Yong Zhang

Yumin Yuan

  • EMSegment Command Line (cli, built-in)

Yundi Shi

Modules by type

3 types:

cli

loadable

scripted

Modules by extension

58 extensions:

ABC

  • ABC (cli, bundled in ABC extension)

AirwaySegmentation

builtin

Cardiac_MRI_Toolkit

CardiacAgastonMeasures

CarreraSlice

CBC_3D_I2MConversion

ChangeTracker

CleaverExtension

CMFreg

CornerAnnotation

CurveMaker

DeveloperToolsForExtensions

DiceComputation

DTIAtlasFiberAnalyzer

ErodeDilateLabel

FastGrowCutEffect

FinslerTractography

GelDosimetryAnalysis

GyroGuide

IASEM

iGyne

ImageMaker

IntensitySegmenter

LAScarSegmenter

LongitudinalPETCT

MABMIS

MatlabBridge

MeshToLabelMap

MultidimData

NeedleFinder

OpenCAD

PBNRR

PercutaneousApproachAnalysis

PerkTutor

PET-IndiC

PETDICOMExtension

PETTumorSegmentation

PkModeling

PortPlacement

PyDevRemoteDebug

Reporting

ResectionPlanner

Scoliosis

SegmentationAidedRegistration

SlicerExtension-VMTK

SlicerIGT

SlicerRT

SlicerToKiwiExporter

SobolevSegmenter

SwissSkullStripper

TCIABrowser

ThingiverseBrowser

TrackerStabilizer

UKFTractography

VolumeClip

WindowLevelEffect

XNATSlicer

Extensions by name

57 extensions:

Extensions by category

25 categories:

Cardiac

Cardiac MRI toolkit

Converters

Developer Tools

Diffusion

Editor Effects

Exporter

Filtering

Morphology

IGT

Informatics

Mesh Generation

Microscopy

Multidimensional data

Quantification

Radiotherapy

Registration

Remote

Scoliosis

Segmentation

Shape Analysis

Tractography

Training

Utilities

Vascular Modeling Toolkit

Wizards

Extensions by contributing organization

55 contributing organizations:

Asclepios INRIA) and Nikos Chrisochoides (CRTC

Boston Childrens Hospital

Brigham and Women's Hospital

BWH

BWH & MGH

BWH, SPL

BWH/UAB

CARMA

College of Information Engineering, Zhejiang University of Technology, Hangzhou, China

Crisalix

CRTC

Department of Neurosurgery, PLA General Hospital, Beijing, China

Department of Orthodontics, UNC

GE

GE GLobal Research

GT

Isomics

Kitware

Massachusetts General Hospital

Moka Creative LLC, Washington University in St. Louis

NIRAL, UNC

Noware

Orobix

PerkLab at Queen's University

PerkLab, Queen's

PerkLab, Queen's University

PMH

Queen's University

Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto

SBU

SCI Institute

Shiga University of Medical Science

Shiga University of Medical Science, Japan

Shiga University of Medical Science, Japan, SPL

SPL

SPL and BWH

SPL B&W Harvard

SRI

Stony Brook University

Surgical Planning Lab

UAB

UIowa

UNC

Univ of Michigan

University College Cork

University of Bern

University of Heidelberg

University of Iowa

University of Utah

Utah

UWA

Washington University in St. Louis

yogesh@bwh.harvard.edu

Extensions by contributing individual

130 contributing individuals:

Akila Viswanathan

Alan Morris

Alex Yarmarkovich

Alireza Mehrtash

Allen Tannenbaum

Andinet Enquobahrie

Andras Lasso

Andre Mastmeyer

Andrey Fedorov

Andriy Fedorov

Andriy Kot

Antonio Damato

Antonio Tristan-Vega

Arie Nakhmani

Arnaud Gelas

Atsushi Yamada

Beatriz Paniagua

Bill Lorensen

Bradley Lowekamp

Brig Bagley

Carl-Fredrik Westin

Christian Bauer

Christian Baumgartner

Csaba Pinter

Dan Marcus

Daniel Haehn

Danny Perry

Demian Wasssermann

Dinggang Shen

Ethan Ulrich

Eugene Kholmovski

Fotis Drakopoulos

Francois Budin

Franklin King

Greg Gardner

Greg Sharp

Guillaume Pernelle

Hans Johnson

Ipek Oguz

Ivan Kolesov

Jan Egger

Jayender Jagadeesan

Jean-Christophe Fillion-Robin

Jennifer Andrea

Jessica Forbes

Jiashu Zhang

Jim Miller

John Buatti

Jonathan Bronson

Josh Cates

Julien Finet

Junichi Tokuda

Karl Fritscher

Kent Williams

Kevin Wang

Kilian Pohl

Koichiro Murakami

Lauren Barber

Laurent Chauvin

Liang-Jia Zhu

Liangjia Zhu

Luca Antiga

Luis G. Torres

Luping Fang

Mahnaz Maddah

Manson Winsauer

Marcel Prastawa

Markus van Tol

Martin Styner

Matt Lougheed

Mattea Welch

Matthew Holden

Matthew S. Holden

Mauricio Reyes

Ming-ching Chang

Minjeong Kim

Nabgha Fahrat

Nicole Aucoin

Nigel Goh

Nikos Chrisochoides

Olivier Clatz

Pat Marion

Patricio Vela

Paul Mercea

Pengdong Xiao

Peter Black

Peter Karasev

Peter Savadjiev

Pietro Nardelli

Qing Pan

Reinhard Beichel

Reinhard R. Beichel

Rick Herrick

Rob MacLeod

Ron Kikinis

Ruifeng Chen

Ryan Eckbo

S

Salma Bengali

Sam Song

Stefan Bauer

Stefan Lienhard

Steve Pieper

Sunil Kumar

Sylvain Bouix

Tamas Ungi

Thomas Fejes

Tina Kapur

Tobias Penzkofer

Vinicius Boen

Vivek Narayan

Xiaofeng Liu

Xiaojun Chen

Xiaolei Chen

y Wells

Yi Gao

Yingxuan Zhu

Yinpeng Li

Yixun Liu

Yogesh Rathi

Yundi Shi