Difference between revisions of "Documentation/4.4/ModuleExtensionListing"

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<noinclude>{{:Documentation/4.4/ModuleExtensionListing/TOC}}</noinclude>
 
<noinclude>{{:Documentation/4.4/ModuleExtensionListing/TOC}}</noinclude>
= Modules by name =
 
212 modules:
 
* [http://www.nitrc.org/projects/abc ABC]    <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small>
 
* [[Documentation/4.4/Modules/ACPCTransform|ACPCTransform]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/AddScalarVolumes|Add Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation]] extension)</small>
 
* [[Documentation/4.4/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Extensions/CMFreg|Apply Matrix]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Beams]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Bin Shrink]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Modules/BRAINSDemonWarp|BRAINSDemon Warp]]    <small>(cli, built-in)</small>
 
* BRAINSDWICleanup    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/BRAINSFit|BRAINSFit]]    <small>(cli, built-in)</small>
 
* BRAINSLabel Stats    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/BRAINSResample|BRAINSResample]]    <small>(cli, built-in)</small>
 
* BRAINSResize    <small>(cli, built-in)</small>
 
* BRAINSROIAuto    <small>(cli, built-in)</small>
 
* BRAINSStrip Rotation    <small>(cli, built-in)</small>
 
* BRAINSTransform Convert    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Breach Warning]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
* [[Documentation/4.4/Modules/CastScalarVolume|Cast Scalar Volume]]    <small>(cli, built-in)</small>
 
* [http://slicer.vmtk.org/ Centerline Computation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/4.4/Modules/ChangeTracker|Change Tracker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
* [[Documentation/4.4/Modules/CheckerBoardFilter|Checker Board Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/CleaverExtension|Cleaver CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Boolean REMOVEFilter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Connected Threshold Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Isolated Connected Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/CollectFiducials|Collect Fiducials]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/Colors|Colors]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/CompareVolumes|Compare Volumes]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/ContourComparison|Contour Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ContourMorphology|Contour Morphology]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Contours|Contours]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
* [[Documentation/4.4/Modules/CreateDICOMSeries|Create DICOMSeries]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Create Models]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/CropVolume|Crop Volume]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]] extension)</small>
 
* [[Documentation/4.4/Modules/Data|Data]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/DataProbe|Data Probe]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/DataStore|Data Store]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/DiceComputation|Dice Computation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]] extension)</small>
 
* [[Documentation/4.4/Modules/DICOM|DICOM]]    <small>(scripted, built-in)</small>
 
* DICOM2Full Brain Tractography    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/DicomRtExport|Dicom Rt Export]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomRtImport|Dicom Rt Import]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomSroExport|Dicom Sro Export]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomSroImport|Dicom Sro Import]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DiffusionTensorScalarMeasurements|Diffusion Tensor Scalar Measurements]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Dilate Label]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseAccumulation|Dose Accumulation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseComparison|Dose Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseVolumeHistogram|Dose Volume Histogram]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Dvh Comparison]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* DWIConvert    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIToDTIEstimation|DWITo DTIEstimation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/EMSegment|EMSegment]]    <small>(loadable, built-in)</small>
 
* EMSegment Command Line    <small>(cli, built-in)</small>
 
* EMSegment Quick    <small>(loadable, built-in)</small>
 
* EMSegment Transform To New Format    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Endoscopy|Endoscopy]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Label]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
 
* [[Documentation/4.4/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/FastGrowCut|Fast Grow Cut]]    <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small>
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
* Fiber Bundle Label Select    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Fiber Compare]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Modules/FiducialRegistration|Fiducial Registration]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Fiducial Registration Wizard]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Fiducials To Model Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/FinslerTractography|Finsler Tractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]]    <small>(cli, built-in)</small>
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo]    <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
* [[Documentation/4.4/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleGrindPeakImageFilter|Grayscale Grind Peak Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleModelMaker|Grayscale Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/GyroGuide|Gyro Guide]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]] extension)</small>
 
* [[Documentation/4.4/Modules/HeterogeneityCAD|Heterogeneity CAD]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small>
 
* [[Documentation/4.4/Modules/HistogramMatching|Histogram Matching]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/IASEM|IASEMImport]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|IASEMImport Series]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Testing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Training]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/4.4/Modules/ImageLabelCombine|Image Label Combine]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/IntensityDifferenceMetric|Intensity Difference Metric]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small>
 
* [[Documentation/4.4/Modules/Isodose|Isodose]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter KUtil]    <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
* [[Documentation/4.4/Modules/LabelAddition|Label Addition]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelExtraction|Label Extraction]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelMapSmoothing|Label Map Smoothing]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Label Object Statistics]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/Reporting|Label To DICOMSEGConverter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 
* [[Documentation/4.4/Modules/LandmarkRegistration|Landmark Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
* [[Documentation/4.4/Modules/LASegmentationWorkflow|LASegmentation Workflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/4.4/Modules/Markups|Markups]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/MaskScalarVolume|Mask Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MedianImageFilter|Median Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MergeModels|Merge Models]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Merge Stat With Fiber]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Modules/MeshCompression|Mesh Compression]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Metafile Importer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Modules/ModelMaker|Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Models|Models]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/ModelToLabelMap|Model To Label Map]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiplyScalarVolumes|Multiply Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
* [[Documentation/4.4/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/OpenIGTLinkIF|Open IGTLink IF]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/OpenIGTLinkRemote|Open IGTLink Remote]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/OrientScalarVolume|Orient Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/PathExplorer|Path Explorer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small>
 
* [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small>
 
* Perform Metric Test    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/PerkEvaluator|Perk Evaluator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Pivot Calibration]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Planar Image]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer bspline]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer landwarp]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Plastimatch Py]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Plm Register]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/PlusRemote|Plus Remote]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/PortPlacement|Port Placement]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PortPlacement|Port Placement]] extension)</small>
 
* [[Documentation/4.4/Modules/ProbeVolumeWithModel|Probe Volume With Model]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/PerkTutor|Python Metrics Calculator]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Modules/Reformat|Reformat]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Extensions/Reporting|Reporting]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 
* [[Documentation/4.4/Modules/ResampleDTIVolume|Resample DTIVolume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ResampleScalarVectorDWIVolume|Resample Scalar Vector DWIVolume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ResectionVolume|Resection Volume]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ResectionPlanner|Resection Planner]] extension)</small>
 
* [[Documentation/4.4/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SampleData|Sample Data]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/ScarVisualization|Scar Visualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/SceneViews|Scene Views]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
* [[Documentation/4.4/Modules/SegmentCAD|Segment CAD]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequence Browser]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequences]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Modules/SimpleFilters|Simple Filters]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/SimpleRegionGrowingSegmentation|Simple Region Growing Segmentation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small>
 
* [[Documentation/4.4/Modules/SobolevSegmenter|Sobolev Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Spacing Aware Curvature Diffusion]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
* [[Documentation/4.4/Modules/SubjectHierarchy|Subject Hierarchy]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/SubtractScalarVolumes|Subtract Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/CMFreg|Surface Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/SurfaceToolbox|Surface Toolbox]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
* [[Documentation/4.4/Modules/SwissSkullStripper|Swiss Skull Stripper]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]] extension)</small>
 
* [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] extension)</small>
 
* [[Documentation/4.4/Modules/ThingiverseBrowser|Thingiverse Browser]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ThingiverseBrowser|Thingiverse Browser]] extension)</small>
 
* [[Documentation/4.4/Modules/ThresholdScalarVolume|Threshold Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/TrackerStabilizer|Tracker Stabilizer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small>
 
* [[Documentation/4.4/Modules/TractographyDisplay|Tractography Display]]    <small>(loadable, built-in)</small>
 
* Tractography Interactive Seeding    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Transform Fusion]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/TransformRecorder|Transform Recorder]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Ultrasound Snapshots]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/Units|Units]]    <small>(loadable, built-in)</small>
 
* VBRAINSDemon Warp    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/VectorToScalarVolume|Vector To Scalar Volume]]    <small>(scripted, built-in)</small>
 
* [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Vff File Reader]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Model]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small>
 
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Roi]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small>
 
* [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/VolumeResliceDriver|Volume Reslice Driver]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/Volumes|Volumes]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/VotingBinaryHoleFillingImageFilter|Voting Binary Hole Filling Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Welcome|Welcome]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small>
 
* [[Documentation/4.4/Modules/WorkflowSegmentation|Workflow Segmentation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Extensions/XNATSlicer|Xnat Slicer]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] extension)</small>
 
 
= Modules by category =
 
= Modules by category =
 
36 categories:
 
36 categories:
* [[#BRAINS|BRAINS]]
+
* [[#Modules_by_category_BRAINS|BRAINS]]
** [[#LabelStatistics|Label Statistics]]
+
** [[#Modules_by_category_BRAINS_LabelStatistics|Label Statistics]]
* [[#Cardiac_MRI_Toolkit|Cardiac MRI Toolkit]]
+
* [[#Modules_by_category_Cardiac_MRI_Toolkit|Cardiac MRI Toolkit]]
* [[#CMF_Registration|CMF Registration]]
+
* [[#Modules_by_category_Converters|Converters]]
** [[#Voxelbase_Registration|Voxelbase Registration]]
+
* [[#Modules_by_category_Developer_Tools|Developer Tools]]
* [[#Converters|Converters]]
+
** [[#Modules_by_category_Developer_Tools_DICOM_Plugins|DICOM Plugins]]
* [[#Developer_Tools|Developer Tools]]
+
** [[#Modules_by_category_Developer_Tools_Editor_Extensions|Editor Extensions]]
** [[#DICOM_Plugins|DICOM Plugins]]
+
** [[#Modules_by_category_Developer_Tools_Matlab|Matlab]]
** [[#Editor_Extensions|Editor Extensions]]
+
* [[#Modules_by_category_Diffusion|Diffusion]]
** [[#Matlab|Matlab]]
+
** [[#Modules_by_category_Diffusion_Diffusion_Data_Conversion|Diffusion Data Conversion]]
* [[#Diffusion|Diffusion]]
+
** [[#Modules_by_category_Diffusion_Diffusion_Tensor_Images|Diffusion Tensor Images]]
** [[#Diffusion_Data_Conversion|Diffusion Data Conversion]]
+
** [[#Modules_by_category_Diffusion_Diffusion_Weighted_Images|Diffusion Weighted Images]]
** [[#Diffusion_Tensor_Images|Diffusion Tensor Images]]
+
** [[#Modules_by_category_Diffusion_FiberAnalysis|Fiber Analysis]]
** [[#Diffusion_Weighted_Images|Diffusion Weighted Images]]
+
** [[#Modules_by_category_Diffusion_Tractography|Tractography]]
** [[#FiberAnalysis|Fiber Analysis]]
+
* [[#Modules_by_category_Editor_Effects|Editor Effects]]
** [[#Tractography|Tractography]]
+
* [[#Modules_by_category_EditorEffect|Editor Effect]]
* [[#Editor_Effects|Editor Effects]]
+
* [[#Modules_by_category_Endoscopy|Endoscopy]]
* [[#Endoscopy|Endoscopy]]
+
* [[#Modules_by_category_Examples|Examples]]
* [[#Examples|Examples]]
+
* [[#Modules_by_category_Exporter|Exporter]]
* [[#Exporter|Exporter]]
+
* [[#Modules_by_category_File|File]]
* [[#File|File]]
+
* [[#Modules_by_category_Filtering|Filtering]]
* [[#Filtering|Filtering]]
+
** [[#Modules_by_category_Filtering_Arithmetic|Arithmetic]]
** [[#Arithmetic|Arithmetic]]
+
** [[#Modules_by_category_Filtering_Denoising|Denoising]]
** [[#Denoising|Denoising]]
+
** [[#Modules_by_category_Filtering_Morphology|Morphology]]
** [[#Morphology|Morphology]]
+
* [[#Modules_by_category_IGT|IGT]]
* [[#IGT|IGT]]
+
* [[#Modules_by_category_Informatics|Informatics]]
* [[#Informatics|Informatics]]
+
* [[#Modules_by_category_Legacy|Legacy]]
* [[#Legacy|Legacy]]
+
** [[#Modules_by_category_Legacy_Converters|Converters]]
** [[#Converters|Converters]]
+
** [[#Modules_by_category_Legacy_Diffusion|Diffusion]]
** [[#Diffusion|Diffusion]]
+
*** [[#Modules_by_category_Diffusion_Denoising|Denoising]]
*** [[#Denoising|Denoising]]
+
*** [[#Modules_by_category_Diffusion_Diffusion_Data_Conversion|Diffusion Data Conversion]]
*** [[#Diffusion_Data_Conversion|Diffusion Data Conversion]]
+
** [[#Modules_by_category_Legacy_Filtering|Filtering]]
** [[#Filtering|Filtering]]
+
** [[#Modules_by_category_Legacy_Registration|Registration]]
** [[#Registration|Registration]]
+
** [[#Modules_by_category_Legacy_Work_in_Progress|Work in Progress]]
** [[#Work_in_Progress|Work in Progress]]
+
*** [[#Modules_by_category_Work_in_Progress_Diffusion_Tensor|Diffusion Tensor]]
*** [[#Diffusion_Tensor|Diffusion Tensor]]
+
**** [[#Modules_by_category_Diffusion_Tensor_Test|Test]]
**** [[#Test|Test]]
+
* [[#Modules_by_category_Margin_Calculator|Margin Calculator]]
* [[#Mesh_Generation|Mesh Generation]]
+
* [[#Modules_by_category_Mesh_Generation|Mesh Generation]]
* [[#MeshGeneration|Mesh Generation]]
+
* [[#Modules_by_category_MeshGeneration|Mesh Generation]]
* [[#Microscopy|Microscopy]]
+
* [[#Modules_by_category_Microscopy|Microscopy]]
* [[#Multidimensional_data|Multidimensional data]]
+
* [[#Modules_by_category_Multidimensional_data|Multidimensional data]]
* [[#MultiVolume_Support|Multi Volume Support]]
+
* [[#Modules_by_category_MultiVolume_Support|Multi Volume Support]]
* [[#Perk_Tutor|Perk Tutor]]
+
* [[#Modules_by_category_Perk_Tutor|Perk Tutor]]
* [[#Plastimatch|Plastimatch]]
+
* [[#Modules_by_category_Plastimatch|Plastimatch]]
** [[#Registration|Registration]]
+
** [[#Modules_by_category_Plastimatch_Registration|Registration]]
** [[#Utilities|Utilities]]
+
** [[#Modules_by_category_Plastimatch_Utilities|Utilities]]
* [[#Quantification|Quantification]]
+
* [[#Modules_by_category_Quantification|Quantification]]
** [[#ChangeQuantification|Change Quantification]]
+
** [[#Modules_by_category_Quantification_ChangeQuantification|Change Quantification]]
* [[#Radiotherapy|Radiotherapy]]
+
* [[#Modules_by_category_Radiotherapy|Radiotherapy]]
* [[#Registration|Registration]]
+
* [[#Modules_by_category_Registration|Registration]]
** [[#Specialized|Specialized]]
+
** [[#Modules_by_category_Registration_Specialized|Specialized]]
* [[#Segmentation|Segmentation]]
+
* [[#Modules_by_category_Segmentation|Segmentation]]
** [[#Specialized|Specialized]]
+
** [[#Modules_by_category_Segmentation_Specialized|Specialized]]
* [[#Shape_Analysis|Shape Analysis]]
+
* [[#Modules_by_category_Shape_Analysis|Shape Analysis]]
* [[#Slicelets|Slicelets]]
+
** [[#Modules_by_category_Shape_Analysis_CMF_Registration|CMF Registration]]
* [[#Surface_Models|Surface Models]]
+
*** [[#Modules_by_category_CMF_Registration_Voxelbase_Registration|Voxelbase Registration]]
* [[#Testing|Testing]]
+
* [[#Modules_by_category_Slicelets|Slicelets]]
** [[#IGT_Tests|IGT Tests]]
+
* [[#Modules_by_category_Surface_Models|Surface Models]]
** [[#SlicerRT_Tests|Slicer RT Tests]]
+
* [[#Modules_by_category_Testing|Testing]]
** [[#TestCases|Test Cases]]
+
** [[#Modules_by_category_Testing_IGT_Tests|IGT Tests]]
* [[#Unspecified|Unspecified]]
+
** [[#Modules_by_category_Testing_SlicerRT_Tests|Slicer RT Tests]]
* [[#Utilities|Utilities]]
+
** [[#Modules_by_category_Testing_TestCases|Test Cases]]
** [[#BRAINS|BRAINS]]
+
* [[#Modules_by_category_Unspecified|Unspecified]]
* [[#Vascular_Modeling_Toolkit|Vascular Modeling Toolkit]]
+
* [[#Modules_by_category_Utilities|Utilities]]
* [[#Wizards|Wizards]]
+
** [[#Modules_by_category_Utilities_BRAINS|BRAINS]]
* [[#Work_in_Progress|Work in Progress]]
+
* [[#Modules_by_category_Vascular_Modeling_Toolkit|Vascular Modeling Toolkit]]
** [[#Converters|Converters]]
+
* [[#Modules_by_category_Wizards|Wizards]]
** [[#Informatics|Informatics]]
+
* [[#Modules_by_category_Work_in_Progress|Work in Progress]]
*** [[#TestCases|Test Cases]]
+
** [[#Modules_by_category_Work_in_Progress_Converters|Converters]]
* [[#XNATSlicer|XNATSlicer]]
+
** [[#Modules_by_category_Work_in_Progress_Informatics|Informatics]]
 +
*** [[#Modules_by_category_Informatics_TestCases|Test Cases]]
 +
<span id='Modules_by_category_BRAINS'></span>
 
== BRAINS ==
 
== BRAINS ==
 +
<span id='Modules_by_category_BRAINS_LabelStatistics'></span>
 
=== LabelStatistics ===
 
=== LabelStatistics ===
 
* BRAINSLabel Stats    <small>(cli, built-in)</small>
 
* BRAINSLabel Stats    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Cardiac_MRI_Toolkit'></span>
 
== Cardiac MRI Toolkit ==
 
== Cardiac MRI Toolkit ==
 +
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Connected Threshold Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Connected Threshold Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Isolated Connected Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Isolated Connected Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
+
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
 
* [[Documentation/4.4/Modules/ScarVisualization|Scar Visualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/ScarVisualization|Scar Visualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Boolean REMOVEFilter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Boolean REMOVEFilter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/LASegmentationWorkflow|LASegmentation Workflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/LASegmentationWorkflow|LASegmentation Workflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
== CMF Registration ==
+
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
* [[Documentation/4.4/Extensions/CMFreg|Apply Matrix]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
+
<span id='Modules_by_category_Converters'></span>
* [[Documentation/4.4/Modules/LandmarkRegistration|Landmark Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Extensions/CMFreg|Surface Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelExtraction|Label Extraction]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelAddition|Label Addition]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
=== Voxelbase Registration ===
 
* [[Documentation/4.4/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
 
== Converters ==
 
== Converters ==
 
* [[Documentation/4.4/Modules/VectorToScalarVolume|Vector To Scalar Volume]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/VectorToScalarVolume|Vector To Scalar Volume]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/CropVolume|Crop Volume]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/CropVolume|Crop Volume]]    <small>(loadable, built-in)</small>
 +
* [[Documentation/4.4/Modules/CreateDICOMSeries|Create DICOMSeries]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/OrientScalarVolume|Orient Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/OrientScalarVolume|Orient Scalar Volume]]    <small>(cli, built-in)</small>
* [[Documentation/4.4/Modules/CreateDICOMSeries|Create DICOMSeries]]    <small>(cli, built-in)</small>
+
<span id='Modules_by_category_Developer_Tools'></span>
 
== Developer Tools ==
 
== Developer Tools ==
 
* [[Documentation/4.4/Modules/EventBroker|Event Broker]]
 
* [[Documentation/4.4/Modules/EventBroker|Event Broker]]
 
* [[Documentation/4.4/Modules/ExecutionModelTour|Execution Model Tour]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ExecutionModelTour|Execution Model Tour]]    <small>(cli, built-in)</small>
 
* Double Arrays    <small>(loadable, built-in)</small>
 
* Double Arrays    <small>(loadable, built-in)</small>
* [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] extension)</small>
 
 
* [[Documentation/4.4/Modules/Cameras|Cameras]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Cameras|Cameras]]    <small>(loadable, built-in)</small>
 +
* [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/DeveloperToolsForExtensions Extension Stats]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/DeveloperToolsForExtensions Developer Tools For Extensions] extension)</small>
 +
* [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/DeveloperToolsForExtensions Developer Tools For Extensions]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/DeveloperToolsForExtensions Developer Tools For Extensions] extension)</small>
 
* [[Documentation/4.4/Modules/ExtensionWizard|Extension Wizard]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/ExtensionWizard|Extension Wizard]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Extensions/ImageMaker|Image Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ImageMaker|Image Maker]] extension)</small>
 
* [[Documentation/4.4/Extensions/ImageMaker|Image Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ImageMaker|Image Maker]] extension)</small>
 +
<span id='Modules_by_category_Developer_Tools_DICOM_Plugins'></span>
 
=== DICOM Plugins ===
 
=== DICOM Plugins ===
 
* DICOMLongitudinal PETCTPlugin
 
* DICOMLongitudinal PETCTPlugin
Line 338: Line 121:
 
* DICOMScalar Volume Plugin
 
* DICOMScalar Volume Plugin
 
* DICOMSlicer Data Bundle Plugin
 
* DICOMSlicer Data Bundle Plugin
 +
<span id='Modules_by_category_Developer_Tools_Editor_Extensions'></span>
 
=== Editor Extensions ===
 
=== Editor Extensions ===
 
* [[Documentation/4.4/Extensions/IASEM|Binary Watershed Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Binary Watershed Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Double Threshold Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Double Threshold Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 +
* [[Documentation/4.4/Modules/PETTumorSegmentationEffect|PETTumor Segmentation Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]] extension)</small>
 +
<span id='Modules_by_category_Developer_Tools_Matlab'></span>
 
=== Matlab ===
 
=== Matlab ===
 
* [[Documentation/4.4/Modules/MatlabCommander|Matlab Commander]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/4.4/Modules/MatlabCommander|Matlab Commander]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/4.4/Modules/MatlabModuleGenerator|Matlab Module Generator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/4.4/Modules/MatlabModuleGenerator|Matlab Module Generator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 +
<span id='Modules_by_category_Diffusion'></span>
 
== Diffusion ==
 
== Diffusion ==
 +
* DICOM2Full Brain Tractography    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/TractographyDisplay|Tractography Display]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/TractographyDisplay|Tractography Display]]    <small>(loadable, built-in)</small>
* DICOM2Full Brain Tractography    <small>(scripted, built-in)</small>
+
<span id='Modules_by_category_Diffusion_Diffusion_Data_Conversion'></span>
 
=== Diffusion Data Conversion ===
 
=== Diffusion Data Conversion ===
 
* DWIConvert    <small>(cli, built-in)</small>
 
* DWIConvert    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Diffusion_Diffusion_Tensor_Images'></span>
 
=== Diffusion Tensor Images ===
 
=== Diffusion Tensor Images ===
 
* [[Documentation/4.4/Modules/ResampleDTIVolume|Resample DTIVolume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ResampleDTIVolume|Resample DTIVolume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DiffusionTensorScalarMeasurements|Diffusion Tensor Scalar Measurements]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DiffusionTensorScalarMeasurements|Diffusion Tensor Scalar Measurements]]    <small>(cli, built-in)</small>
 +
* [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/ResampleDTIlogEuclidean Resample DTIlog Euclidean]    <small>(cli, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/ResampleDTIlogEuclidean Resample DTIlog Euclidean] extension)</small>
 
* [[Documentation/4.4/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]]    <small>(cli, built-in)</small>
 
* Tractography Interactive Seeding    <small>(loadable, built-in)</small>
 
* Tractography Interactive Seeding    <small>(loadable, built-in)</small>
 +
<span id='Modules_by_category_Diffusion_Diffusion_Weighted_Images'></span>
 
=== Diffusion Weighted Images ===
 
=== Diffusion Weighted Images ===
 
* [[Documentation/4.4/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ResampleScalarVectorDWIVolume|Resample Scalar Vector DWIVolume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ResampleScalarVectorDWIVolume|Resample Scalar Vector DWIVolume]]    <small>(cli, built-in)</small>
* [[Documentation/4.4/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]]    <small>(cli, built-in)</small>
 
 
* [[Documentation/4.4/Modules/DWIToDTIEstimation|DWITo DTIEstimation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIToDTIEstimation|DWITo DTIEstimation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 +
* [[Documentation/4.4/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/FinslerTractography|Finsler Tractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/FinslerTractography|Finsler Tractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]]    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Diffusion_FiberAnalysis'></span>
 
=== FiberAnalysis ===
 
=== FiberAnalysis ===
 +
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Fiber Compare]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Fiber Compare]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Merge Stat With Fiber]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Merge Stat With Fiber]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 +
<span id='Modules_by_category_Diffusion_Tractography'></span>
 
=== Tractography ===
 
=== Tractography ===
 
* [[Documentation/4.4/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]]    <small>(scripted, built-in)</small>
 +
* Fiber Bundle Label Select    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
* Fiber Bundle Label Select    <small>(cli, built-in)</small>
+
<span id='Modules_by_category_Editor_Effects'></span>
 
== Editor Effects ==
 
== Editor Effects ==
 
* [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small>
 
* [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small>
 +
<span id='Modules_by_category_EditorEffect'></span>
 +
== EditorEffect ==
 +
* [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]] extension)</small>
 +
<span id='Modules_by_category_Endoscopy'></span>
 
== Endoscopy ==
 
== Endoscopy ==
 
* [[Documentation/4.4/Modules/Endoscopy|Endoscopy]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/Endoscopy|Endoscopy]]    <small>(scripted, built-in)</small>
 +
<span id='Modules_by_category_Examples'></span>
 
== Examples ==
 
== Examples ==
* [[Documentation/4.4/Modules/FastGrowCut|Fast Grow Cut]]    <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small>
+
* [[Documentation/4.4/Modules/FastGrowCut|Fast Grow Cut]]    <small>(loadable, bundled in [https://www.slicer.org/wiki/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small>
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
+
* [http://wiki.slicer.org/wiki/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter]    <small>(loadable, bundled in [http://wiki.slicer.org/wiki/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
+
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
+
* [http://wiki.slicer.org/wiki/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]    <small>(loadable, bundled in [http://wiki.slicer.org/wiki/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 +
<span id='Modules_by_category_Exporter'></span>
 
== Exporter ==
 
== Exporter ==
 
* [[Documentation/4.4/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small>
 
* [[Documentation/4.4/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small>
 +
<span id='Modules_by_category_File'></span>
 
== File ==
 
== File ==
 
* [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 +
<span id='Modules_by_category_Filtering'></span>
 
== Filtering ==
 
== Filtering ==
 
* [[Documentation/4.4/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli, built-in)</small>
* [[Documentation/4.4/Modules/ThresholdScalarVolume|Threshold Scalar Volume]]    <small>(cli, built-in)</small>
 
 
* [[Documentation/4.4/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SimpleFilters|Simple Filters]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/SimpleFilters|Simple Filters]]    <small>(scripted, built-in)</small>
Line 393: Line 194:
 
* [[Documentation/4.4/Modules/HistogramMatching|Histogram Matching]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/HistogramMatching|Histogram Matching]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/CheckerBoardFilter|Checker Board Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/CheckerBoardFilter|Checker Board Filter]]    <small>(cli, built-in)</small>
 +
* [[Documentation/4.4/Modules/ThresholdScalarVolume|Threshold Scalar Volume]]    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Filtering_Arithmetic'></span>
 
=== Arithmetic ===
 
=== Arithmetic ===
 
* [[Documentation/4.4/Modules/MultiplyScalarVolumes|Multiply Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiplyScalarVolumes|Multiply Scalar Volumes]]    <small>(cli, built-in)</small>
Line 399: Line 202:
 
* [[Documentation/4.4/Modules/SubtractScalarVolumes|Subtract Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SubtractScalarVolumes|Subtract Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MaskScalarVolume|Mask Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MaskScalarVolume|Mask Scalar Volume]]    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Filtering_Denoising'></span>
 
=== Denoising ===
 
=== Denoising ===
 
* [[Documentation/4.4/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]]    <small>(cli, built-in)</small>
Line 404: Line 208:
 
* [[Documentation/4.4/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Filtering_Morphology'></span>
 
=== Morphology ===
 
=== Morphology ===
 
* [[Documentation/4.4/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Label]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Label]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
 +
* [[Documentation/4.4/Modules/GrayscaleGrindPeakImageFilter|Grayscale Grind Peak Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Dilate Label]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Dilate Label]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
* [[Documentation/4.4/Modules/GrayscaleGrindPeakImageFilter|Grayscale Grind Peak Image Filter]]    <small>(cli, built-in)</small>
+
<span id='Modules_by_category_IGT'></span>
 
== IGT ==
 
== IGT ==
 
* [[Documentation/4.4/Modules/ResectionVolume|Resection Volume]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ResectionPlanner|Resection Planner]] extension)</small>
 
* [[Documentation/4.4/Modules/ResectionVolume|Resection Volume]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ResectionPlanner|Resection Planner]] extension)</small>
Line 425: Line 231:
 
* [[Documentation/4.4/Modules/GyroGuide|Gyro Guide]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]] extension)</small>
 
* [[Documentation/4.4/Modules/GyroGuide|Gyro Guide]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Fiducial Registration Wizard]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Fiducial Registration Wizard]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 +
* [[Documentation/4.4/Extensions/SlicerIGT|Watchdog]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/OpenIGTLinkRemote|Open IGTLink Remote]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/OpenIGTLinkRemote|Open IGTLink Remote]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/PlusRemote|Plus Remote]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/PlusRemote|Plus Remote]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 +
* [[Documentation/4.4/Extensions/SlicerIGT|Model Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Pivot Calibration]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Pivot Calibration]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
* [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 +
<span id='Modules_by_category_Informatics'></span>
 
== Informatics ==
 
== Informatics ==
 
* [[Documentation/4.4/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
Line 442: Line 251:
 
* [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]] extension)</small>
 
* [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]] extension)</small>
 
* [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] extension)</small>
 
* [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] extension)</small>
 +
<span id='Modules_by_category_Legacy'></span>
 
== Legacy ==
 
== Legacy ==
 +
<span id='Modules_by_category_Legacy_Converters'></span>
 
=== Converters ===
 
=== Converters ===
 
* [[Documentation/4.4/Modules/BSplineToDeformationField|BSpline To Deformation Field]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/BSplineToDeformationField|BSpline To Deformation Field]]    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Legacy_Diffusion'></span>
 
=== Diffusion ===
 
=== Diffusion ===
 +
<span id='Modules_by_category_Diffusion_Denoising'></span>
 
==== Denoising ====
 
==== Denoising ====
 
* [[Documentation/4.4/Modules/DWIUnbiasedNonLocalMeansFilter|DWIUnbiased Non Local Means Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIUnbiasedNonLocalMeansFilter|DWIUnbiased Non Local Means Filter]]    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Diffusion_Diffusion_Data_Conversion'></span>
 
==== Diffusion Data Conversion ====
 
==== Diffusion Data Conversion ====
 
* DTIimport    <small>(cli, built-in)</small>
 
* DTIimport    <small>(cli, built-in)</small>
 
* DTIexport    <small>(cli, built-in)</small>
 
* DTIexport    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Legacy_Filtering'></span>
 
=== Filtering ===
 
=== Filtering ===
 
* [[Documentation/4.4/Modules/OtsuThresholdImageFilter|Otsu Threshold Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/OtsuThresholdImageFilter|Otsu Threshold Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ResampleScalarVolume|Resample Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ResampleScalarVolume|Resample Scalar Volume]]    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Legacy_Registration'></span>
 
=== Registration ===
 
=== Registration ===
 
* Test Grid Transform Registration    <small>(cli, built-in)</small>
 
* Test Grid Transform Registration    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ExpertAutomatedRegistration|Expert Automated Registration]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ExpertAutomatedRegistration|Expert Automated Registration]]    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Legacy_Work_in_Progress'></span>
 
=== Work in Progress ===
 
=== Work in Progress ===
 +
<span id='Modules_by_category_Work_in_Progress_Diffusion_Tensor'></span>
 
==== Diffusion Tensor ====
 
==== Diffusion Tensor ====
 +
<span id='Modules_by_category_Diffusion_Tensor_Test'></span>
 
===== Test =====
 
===== Test =====
 
* Diffusion Tensor Test    <small>(cli, built-in)</small>
 
* Diffusion Tensor Test    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Margin_Calculator'></span>
 +
== Margin Calculator ==
 +
* [[Documentation/4.4/Extensions/MarginCalculator|Synthetic RTDose]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
 +
* [[Documentation/4.4/Extensions/MarginCalculator|Motion Simulator Double Array]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
 +
* [[Documentation/4.4/Extensions/MarginCalculator|Dose Morphology]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
 +
* [[Documentation/4.4/Extensions/MarginCalculator|Margin Calculator]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
 +
* [[Documentation/4.4/Extensions/MarginCalculator|Dose Population Histogram]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
 +
* [[Documentation/4.4/Extensions/MarginCalculator|Motion Simulator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
 +
<span id='Modules_by_category_Mesh_Generation'></span>
 
== Mesh Generation ==
 
== Mesh Generation ==
 
* [[Documentation/4.4/Extensions/CleaverExtension|Cleaver CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]] extension)</small>
 
* [[Documentation/4.4/Extensions/CleaverExtension|Cleaver CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]] extension)</small>
 +
<span id='Modules_by_category_MeshGeneration'></span>
 
== MeshGeneration ==
 
== MeshGeneration ==
 
* [[Documentation/4.4/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Modules/MeshCompression|Mesh Compression]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Modules/MeshCompression|Mesh Compression]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 +
<span id='Modules_by_category_Microscopy'></span>
 
== Microscopy ==
 
== Microscopy ==
 
* [[Documentation/4.4/Extensions/IASEM|Bin Shrink]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Bin Shrink]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Label Object Statistics]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Label Object Statistics]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Spacing Aware Curvature Diffusion]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Spacing Aware Curvature Diffusion]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 +
* [[Documentation/4.4/Extensions/IASEM|IASEMImport Series]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|IASEMImport]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|IASEMImport]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
* [[Documentation/4.4/Extensions/IASEM|IASEMImport Series]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
+
<span id='Modules_by_category_Multidimensional_data'></span>
 
== Multidimensional data ==
 
== Multidimensional data ==
 
* [[Documentation/4.4/Extensions/MultidimData|Metafile Importer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Metafile Importer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequence Browser]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequence Browser]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequences]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequences]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 +
<span id='Modules_by_category_MultiVolume_Support'></span>
 
== MultiVolume Support ==
 
== MultiVolume Support ==
 
* [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
 +
<span id='Modules_by_category_Perk_Tutor'></span>
 
== Perk Tutor ==
 
== Perk Tutor ==
 
* [[Documentation/4.4/Extensions/PerkTutor|Python Metrics Calculator]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Extensions/PerkTutor|Python Metrics Calculator]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
Line 484: Line 317:
 
* [[Documentation/4.4/Modules/TransformRecorder|Transform Recorder]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Modules/TransformRecorder|Transform Recorder]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Modules/PerkEvaluator|Perk Evaluator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Modules/PerkEvaluator|Perk Evaluator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 +
<span id='Modules_by_category_Plastimatch'></span>
 
== Plastimatch ==
 
== Plastimatch ==
 
* [[Documentation/4.4/Modules/DicomSroExport|Dicom Sro Export]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomSroExport|Dicom Sro Export]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Plm Register]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Plm Register]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 +
<span id='Modules_by_category_Plastimatch_Registration'></span>
 
=== Registration ===
 
=== Registration ===
 
* [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer bspline]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer bspline]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer landwarp]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer landwarp]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 +
<span id='Modules_by_category_Plastimatch_Utilities'></span>
 
=== Utilities ===
 
=== Utilities ===
 
* [[Documentation/4.4/Extensions/SlicerRT|Plastimatch Py]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Plastimatch Py]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 +
<span id='Modules_by_category_Quantification'></span>
 
== Quantification ==
 
== Quantification ==
 +
* [[Documentation/4.4/Modules/dPetBrainQuantification|d Pet Brain Quantification]]    <small>(scripted, bundled in [http://gti-fing.github.io/SlicerPetSpectAnalysis Pet Spect Analysis] extension)</small>
 +
* [[Documentation/4.4/Modules/QuantitativeIndicesCLI|Quantitative Indices CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]]    <small>(cli, built-in)</small>
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
+
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
* [[Documentation/4.4/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
* [[Documentation/4.4/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small>
 +
* [[Documentation/4.4/Extensions/PET-IndiC|PETIndi C]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small>
 
* [[Documentation/4.4/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small>
 +
* [[Documentation/4.4/Extensions/PET-IndiC|Quantitative Indices Tool]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Modules/HeterogeneityCAD|Heterogeneity CAD]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small>
 
* [[Documentation/4.4/Modules/HeterogeneityCAD|Heterogeneity CAD]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small>
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/4.4/Modules/DiceComputation|Dice Computation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]] extension)</small>
 
* [[Documentation/4.4/Modules/DiceComputation|Dice Computation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]] extension)</small>
 
* [[Documentation/4.4/Modules/DataProbe|Data Probe]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/DataProbe|Data Probe]]    <small>(scripted, built-in)</small>
 +
<span id='Modules_by_category_Quantification_ChangeQuantification'></span>
 
=== ChangeQuantification ===
 
=== ChangeQuantification ===
 
* [[Documentation/4.4/Modules/IntensityDifferenceMetric|Intensity Difference Metric]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
* [[Documentation/4.4/Modules/IntensityDifferenceMetric|Intensity Difference Metric]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 +
<span id='Modules_by_category_Radiotherapy'></span>
 
== Radiotherapy ==
 
== Radiotherapy ==
 
* [[Documentation/4.4/Modules/ContourComparison|Contour Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ContourComparison|Contour Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
Line 514: Line 357:
 
* [[Documentation/4.4/Modules/DoseComparison|Dose Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseComparison|Dose Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ContourMorphology|Contour Morphology]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ContourMorphology|Contour Morphology]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
* [[Documentation/4.4/Extensions/SlicerRT|Planar Image]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
 
* [[Documentation/4.4/Modules/DicomSroImport|Dicom Sro Import]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomSroImport|Dicom Sro Import]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseVolumeHistogram|Dose Volume Histogram]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseVolumeHistogram|Dose Volume Histogram]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 +
* [[Documentation/4.4/Extensions/SlicerRT|Planar Image]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 +
<span id='Modules_by_category_Registration'></span>
 
== Registration ==
 
== Registration ==
 
* [[Documentation/4.4/Modules/BRAINSResample|BRAINSResample]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/BRAINSResample|BRAINSResample]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
* BRAINSResize    <small>(cli, built-in)</small>
 
* BRAINSResize    <small>(cli, built-in)</small>
 +
* [[Documentation/4.4/Modules/LandmarkRegistration|Landmark Registration]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/BRAINSFit|BRAINSFit]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/BRAINSFit|BRAINSFit]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small>
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small>
 
* Perform Metric Test    <small>(cli, built-in)</small>
 
* Perform Metric Test    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Registration_Specialized'></span>
 
=== Specialized ===
 
=== Specialized ===
 
* [[Documentation/4.4/Modules/ACPCTransform|ACPCTransform]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ACPCTransform|ACPCTransform]]    <small>(cli, built-in)</small>
Line 530: Line 376:
 
* [[Documentation/4.4/Modules/BRAINSDemonWarp|BRAINSDemon Warp]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/BRAINSDemonWarp|BRAINSDemon Warp]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Reformat|Reformat]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Reformat|Reformat]]    <small>(loadable, built-in)</small>
 +
<span id='Modules_by_category_Segmentation'></span>
 
== Segmentation ==
 
== Segmentation ==
 +
* [[Documentation/4.4/Modules/AirwaySegmentation|Airway Segmentation]]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation] extension)</small>
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Training]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Training]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
* [http://www.nitrc.org/projects/abc ABC]    <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small>
+
* [https://github.com/Tomnl/Slicer-Wasp Wasp]    <small>(scripted, bundled in [https://github.com/Tomnl/Slicer-Wasp Wasp] extension)</small>
 +
* [[Documentation/4.4/Modules/ABC|ABC]]    <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small>
 
* EMSegment Quick    <small>(loadable, built-in)</small>
 
* EMSegment Quick    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/SimpleRegionGrowingSegmentation|Simple Region Growing Segmentation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SimpleRegionGrowingSegmentation|Simple Region Growing Segmentation]]    <small>(cli, built-in)</small>
Line 545: Line 394:
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Testing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Testing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small>
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small>
 +
<span id='Modules_by_category_Segmentation_Specialized'></span>
 
=== Specialized ===
 
=== Specialized ===
 
* EMSegment Command Line    <small>(cli, built-in)</small>
 
* EMSegment Command Line    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli, built-in)</small>
 
* BRAINSROIAuto    <small>(cli, built-in)</small>
 
* BRAINSROIAuto    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Shape_Analysis'></span>
 
== Shape Analysis ==
 
== Shape Analysis ==
 
* [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]] extension)</small>
 
* [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]] extension)</small>
 +
* [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/AnglePlanes Angle Planes]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/AnglePlanes Angle Planes Extension] extension)</small>
 +
* [[Documentation/4.4/Extensions/ModelToModelDistance|Model To Model Distance]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ModelToModelDistance|Model To Model Distance]] extension)</small>
 +
* [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/MeshStatistics Mesh Statistics]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/MeshStatistics Mesh Statistics Extension] extension)</small>
 +
* [[Documentation/4.4/Extensions/EasyClip|Easy Clip]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/EasyClip|Easy Clip]] extension)</small>
 +
* [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/PickAndPaint Pick And Paint]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/PickAndPaint Pick And Paint Extension] extension)</small>
 +
* [[Documentation/4.4/Extensions/Q3DC|Q3DC]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Q3DC|Q3DC]] extension)</small>
 +
<span id='Modules_by_category_Shape_Analysis_CMF_Registration'></span>
 +
=== CMF Registration ===
 +
* [[Documentation/4.4/Extensions/CMFreg|Apply Matrix]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 +
* [[Documentation/4.4/Modules/SurfaceRegistration|Surface Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 +
* [[Documentation/4.4/Modules/LabelExtraction|Label Extraction]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 +
* [[Documentation/4.4/Modules/LabelAddition|Label Addition]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 +
* [[Documentation/4.4/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 +
<span id='Modules_by_category_CMF_Registration_Voxelbase_Registration'></span>
 +
==== Voxelbase Registration ====
 +
* [[Documentation/4.4/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 +
* [[Documentation/4.4/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 +
* [[Documentation/4.4/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 +
<span id='Modules_by_category_Slicelets'></span>
 
== Slicelets ==
 
== Slicelets ==
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
+
* [http://www.slicer.org/wiki/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo]    <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
+
* [http://www.slicer.org/wiki/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo]    <small>(loadable, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 +
<span id='Modules_by_category_Surface_Models'></span>
 
== Surface Models ==
 
== Surface Models ==
* [[Documentation/4.4/Modules/SurfaceToolbox|Surface Toolbox]]    <small>(scripted, built-in)</small>
 
 
* [[Documentation/4.4/Modules/ModelToLabelMap|Model To Label Map]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ModelToLabelMap|Model To Label Map]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MergeModels|Merge Models]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MergeModels|Merge Models]]    <small>(cli, built-in)</small>
 +
* [[Documentation/4.4/Modules/SurfaceToolbox|Surface Toolbox]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/ProbeVolumeWithModel|Probe Volume With Model]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ProbeVolumeWithModel|Probe Volume With Model]]    <small>(cli, built-in)</small>
 +
* [[Documentation/4.4/Modules/ModelMaker|Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleModelMaker|Grayscale Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleModelMaker|Grayscale Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/LabelMapSmoothing|Label Map Smoothing]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/LabelMapSmoothing|Label Map Smoothing]]    <small>(cli, built-in)</small>
* [[Documentation/4.4/Modules/ModelMaker|Model Maker]]    <small>(cli, built-in)</small>
+
<span id='Modules_by_category_Testing'></span>
 
== Testing ==
 
== Testing ==
 
* Self Tests
 
* Self Tests
Line 570: Line 442:
 
* Performance Tests
 
* Performance Tests
 
* Slicer MRBTest
 
* Slicer MRBTest
 +
<span id='Modules_by_category_Testing_IGT_Tests'></span>
 
=== IGT Tests ===
 
=== IGT Tests ===
 
* Breach Warning Self Test
 
* Breach Warning Self Test
 
* Watchdog Self Test
 
* Watchdog Self Test
 +
<span id='Modules_by_category_Testing_SlicerRT_Tests'></span>
 
=== SlicerRT Tests ===
 
=== SlicerRT Tests ===
 +
* NAMIC Tutorial 2013June Self Test
 
* Dicom Rt Import Self Test
 
* Dicom Rt Import Self Test
 
* [[Documentation/4.4/Extensions/SlicerRT|Batch Contour Conversion]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Batch Contour Conversion]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 +
<span id='Modules_by_category_Testing_TestCases'></span>
 
=== TestCases ===
 
=== TestCases ===
 
* Slice Link Logic    <small>(scripted, built-in)</small>
 
* Slice Link Logic    <small>(scripted, built-in)</small>
Line 584: Line 460:
 
* slicer Close Crash Bug2590
 
* slicer Close Crash Bug2590
 
* Subject Hierarchy Generic Self Test
 
* Subject Hierarchy Generic Self Test
* View Controllers Slice Interpolation Bug1926
+
* Scene Performance    <small>(scripted, built-in)</small>
 
* Charting    <small>(scripted, built-in)</small>
 
* Charting    <small>(scripted, built-in)</small>
* Scene Performance    <small>(scripted, built-in)</small>
+
* Neurosurgical Planning Tutorial Markups Self Test
 
* Markups In Compare Viewers Self Test
 
* Markups In Compare Viewers Self Test
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures]    <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] extension)</small>
+
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures]    <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures] extension)</small>
 
* fiber visibility crash2438
 
* fiber visibility crash2438
 
* scene Import2428
 
* scene Import2428
Line 595: Line 471:
 
* RSNA2012Prostate Demo
 
* RSNA2012Prostate Demo
 
* Add Many Markups Fiducial Test
 
* Add Many Markups Fiducial Test
* Neurosurgical Planning Tutorial Markups Self Test
 
 
* Colors Scalar Bar Self Test
 
* Colors Scalar Bar Self Test
 
* Markups In Views Self Test
 
* Markups In Views Self Test
Line 601: Line 476:
 
* Change Tracker Self Test
 
* Change Tracker Self Test
 
* Fiducial Layout Switch Bug1914
 
* Fiducial Layout Switch Bug1914
 +
* View Controllers Slice Interpolation Bug1926
 
* Slicer4Minute    <small>(scripted, built-in)</small>
 
* Slicer4Minute    <small>(scripted, built-in)</small>
 
* label Toggle Bug2049
 
* label Toggle Bug2049
 +
<span id='Modules_by_category_Unspecified'></span>
 
== Unspecified ==
 
== Unspecified ==
 
* BRAINSDWICleanup    <small>(cli, built-in)</small>
 
* BRAINSDWICleanup    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Utilities'></span>
 
== Utilities ==
 
== Utilities ==
 
* [[Documentation/4.4/Modules/ThingiverseBrowser|Thingiverse Browser]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ThingiverseBrowser|Thingiverse Browser]] extension)</small>
 
* [[Documentation/4.4/Modules/ThingiverseBrowser|Thingiverse Browser]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ThingiverseBrowser|Thingiverse Browser]] extension)</small>
Line 610: Line 488:
 
* EMSegment Transform To New Format    <small>(cli, built-in)</small>
 
* EMSegment Transform To New Format    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DataStore|Data Store]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/DataStore|Data Store]]    <small>(loadable, built-in)</small>
 +
<span id='Modules_by_category_Utilities_BRAINS'></span>
 
=== BRAINS ===
 
=== BRAINS ===
 
* BRAINSTransform Convert    <small>(cli, built-in)</small>
 
* BRAINSTransform Convert    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Vascular_Modeling_Toolkit'></span>
 
== Vascular Modeling Toolkit ==
 
== Vascular Modeling Toolkit ==
 
* [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [http://slicer.vmtk.org/ Centerline Computation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [http://slicer.vmtk.org/ Centerline Computation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 +
<span id='Modules_by_category_Wizards'></span>
 
== Wizards ==
 
== Wizards ==
* [[Documentation/4.4/Modules/CompareVolumes|Compare Volumes]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
+
* [[Documentation/4.4/Modules/CompareVolumes|Compare Volumes]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/ChangeTracker|Change Tracker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
* [[Documentation/4.4/Modules/ChangeTracker|Change Tracker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 +
<span id='Modules_by_category_Work_in_Progress'></span>
 
== Work in Progress ==
 
== Work in Progress ==
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 +
<span id='Modules_by_category_Work_in_Progress_Converters'></span>
 
=== Converters ===
 
=== Converters ===
 
* [[Documentation/4.4/Extensions/Reporting|Label To DICOMSEGConverter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 
* [[Documentation/4.4/Extensions/Reporting|Label To DICOMSEGConverter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 +
<span id='Modules_by_category_Work_in_Progress_Informatics'></span>
 
=== Informatics ===
 
=== Informatics ===
 
* [[Documentation/4.4/Extensions/Reporting|Reporting]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 
* [[Documentation/4.4/Extensions/Reporting|Reporting]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 +
<span id='Modules_by_category_Informatics_TestCases'></span>
 
==== TestCases ====
 
==== TestCases ====
 
* Reporting Self Test
 
* Reporting Self Test
 
* Label To DICOMSEGConverter Self Test
 
* Label To DICOMSEGConverter Self Test
== XNATSlicer ==
+
= Modules by name =
* [[Documentation/4.4/Extensions/XNATSlicer|Xnat Slicer]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] extension)</small>
+
233 modules:
= Modules by contributing organization =
+
* [[Documentation/4.4/Modules/ABC|ABC]]    <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small>
71 contributing organizations:
+
* [[Documentation/4.4/Modules/ACPCTransform|ACPCTransform]]    <small>(cli, built-in)</small>
* [[#Asclepios_INRIA|Asclepios INRIA]]
 
* [[#AZE_R_D|AZE R&D]]
 
* [[#Boston_Children_s_Hospital|Boston Children's Hospital]]
 
* [[#Brigham_and_Women_s_Hospital|Brigham and Women's Hospital]]
 
* [[#BWH|BWH]]
 
* [[#BWH.2C_SPL|BWH, SPL]]
 
* [[#BWH.2C_SUMS|BWH, SUMS]]
 
* [[#BWH.2FUAB|BWH/UAB]]
 
* [[#CARMA|CARMA]]
 
* [[#College_of_Information_Engineering.2C_Zhejiang_University_of_Technology.2C_Hangzhou.2C_China.29.3B_Xiaolei_Chen.2C_Jiashu_Zhang.28Department_of_Neurosurgery.2C_PLA_General_Hospital.2C_Beijing.2C_China|College of Information Engineering, Zhejiang University of Technology, Hangzhou, China);  Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China]]
 
* [[#CRTC|CRTC]]
 
* [[#gatech|gatech]]
 
* [[#GE|GE]]
 
* [[#Georgia_Tech|Georgia Tech]]
 
* [[#IBM|IBM]]
 
* [[#Isomics|Isomics]]
 
* [[#Isomics_Inc.|Isomics Inc.]]
 
* [[#Isomics.2C_pieper.40isomics.com|Isomics, pieper@isomics.com]]
 
* [[#Kingston_General_Hospital|Kingston General Hospital]]
 
* [[#Kitware|Kitware]]
 
* [[#Kitware.29|Kitware)]]
 
* [[#MGH|MGH]]
 
* [[#MGH.2C_Boston|MGH, Boston]]
 
* [[#Moka_Creative.2C_LLC.2C_kumar.sunil.p.40gmail.com|Moka Creative, LLC, kumar.sunil.p@gmail.com]]
 
* [[#MSC.2FNLM|MSC/NLM]]
 
* [[#Noware|Noware]]
 
* [[#Orobix|Orobix]]
 
* [[#PerkLab_at_Queen_s_University|Perk Lab at Queen's University]]
 
* [[#PerkLab.2C_Queen_s|Perk Lab, Queen's]]
 
* [[#PerkLab.2C_Queen_s_University|Perk Lab, Queen's University]]
 
* [[#PMH|PMH]]
 
* [[#PMH.2C_Toronto|PMH, Toronto]]
 
* [[#Princess_Margaret_Cancer_Centre|Princess Margaret Cancer Centre]]
 
* [[#Queen_s|Queen's]]
 
* [[#Queen_s_Universit|Queen's Universit]]
 
* [[#Queen_s_University|Queen's University]]
 
* [[#Queen_s_University.29_Jaime_Garcia-Guevara_.28Queen_s_University|Queen's University) Jaime Garcia-Guevara (Queen's University]]
 
* [[#Radiation_Medicine_Program.2C_Princess_Margaret_Hospital.2C_University_Health_Network_Toronto|Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto]]
 
* [[#RMP.2C_PMH|RMP, PMH]]
 
* [[#SAIC-Frederick.2C_NCI-Frederick|SAIC-Frederick, NCI-Frederick]]
 
* [[#SBU|SBU]]
 
* [[#SCI_Institute|SCI Institute]]
 
* [[#Shiga_University_of_Medical_Science_in_Japan|Shiga University of Medical Science in Japan]]
 
* [[#Shiga_University_of_Medical_Science.2C_Japan.2C_SPL|Shiga University of Medical Science, Japan, SPL]]
 
* [[#SINAPSE|SINAPSE]]
 
* [[#SNR|SNR]]
 
* [[#SPL|SPL]]
 
* [[#SPL_B_W_Harvard|SPL B&W Harvard]]
 
* [[#SPL.2C_BWH|SPL, BWH]]
 
* [[#SPL.2C_BWH.2C_UPenn|SPL, BWH, UPenn]]
 
* [[#SUMS|SUMS]]
 
* [[#Surgical_Planning_Lab|Surgical Planning Lab]]
 
* [[#UAB|UAB]]
 
* [[#UHN.2C_Toronto|UHN, Toronto]]
 
* [[#Uiowa|Uiowa]]
 
* [[#UIowa|UIowa]]
 
* [[#UNC|UNC]]
 
* [[#Univ_of_Michigan|Univ of Michigan]]
 
* [[#Univ._of_Iowa|Univ. of Iowa]]
 
* [[#University__Magna_Graecia__of_Catanzaro|University 'Magna Graecia' of Catanzaro]]
 
* [[#University_College_Cork|University College Cork]]
 
* [[#University_of_Heidelberg|University of Heidelberg]]
 
* [[#University_of_Iowa|University of Iowa]]
 
* [[#University_of_Iowa.29_and_Andrey_Fedorov_.28SPL|University of Iowa) and Andrey Fedorov (SPL]]
 
* [[#UPenn|UPenn]]
 
* [[#Utah|Utah]]
 
* [[#UVa|UVa]]
 
* [[#UWA|UWA]]
 
* [[#WashU-St._Louis.2C_dmarcus.40wustl.edu|Wash U-St. Louis, dmarcus@wustl.edu]]
 
* [[#while_at_GE|while at GE]]
 
== Asclepios INRIA ==
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small>
 
== AZE R&D ==
 
* JRC2013Vis
 
== Boston Children's Hospital ==
 
* [http://slicer.vmtk.org/ Centerline Computation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
== Brigham and Women's Hospital ==
 
* [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
* [[Documentation/4.4/Modules/SurfaceToolbox|Surface Toolbox]]    <small>(scripted, built-in)</small>
 
* test tractography display
 
* [[Documentation/4.4/Modules/VolumeResliceDriver|Volume Reslice Driver]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
== BWH ==
 
* Add Many Markups Fiducial Test
 
* Change Tracker Self Test
 
* Colors Scalar Bar Self Test
 
* [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]] extension)</small>
 
* [[Documentation/4.4/Modules/DiceComputation|Dice Computation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]] extension)</small>
 
* [[Documentation/4.4/Modules/DICOMRWVMPlugin|DICOMRWVMPlugin]]
 
* Fiducial Layout Switch Bug1914
 
* [[Documentation/4.4/Modules/HeterogeneityCAD|Heterogeneity CAD]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small>
 
* [[Documentation/4.4/Modules/Markups|Markups]]    <small>(loadable, built-in)</small>
 
* Markups In Compare Viewers Self Test
 
* Markups In Views Self Test
 
* Neurosurgical Planning Tutorial Markups Self Test
 
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
* [[Documentation/4.4/Modules/SegmentCAD|Segment CAD]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small>
 
* Volume Rendering Scene Close    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small>
 
== BWH, SPL ==
 
* [[Documentation/4.4/Modules/CropVolume|Crop Volume]]    <small>(loadable, built-in)</small>
 
== BWH, SUMS ==
 
* [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
== BWH/UAB ==
 
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
== CARMA ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Boolean REMOVEFilter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Connected Threshold Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Isolated Connected Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/LASegmentationWorkflow|LASegmentation Workflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/ScarVisualization|Scar Visualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
== College of Information Engineering, Zhejiang University of Technology, Hangzhou, China);  Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China ==
 
* [[Documentation/4.4/Modules/GyroGuide|Gyro Guide]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]] extension)</small>
 
== CRTC ==
 
* [[Documentation/4.4/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Modules/MeshCompression|Mesh Compression]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small>
 
== gatech ==
 
* [[Documentation/4.4/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli, built-in)</small>
 
== GE ==
 
 
* [[Documentation/4.4/Modules/AddScalarVolumes|Add Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/AddScalarVolumes|Add Scalar Volumes]]    <small>(cli, built-in)</small>
* Charting    <small>(scripted, built-in)</small>
+
* [[Documentation/4.4/Modules/AirwaySegmentation|Airway Segmentation]]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation] extension)</small>
* [[Documentation/4.4/Modules/CheckerBoardFilter|Checker Board Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/CreateDICOMSeries|Create DICOMSeries]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
* Diffusion Tensor Test    <small>(cli, built-in)</small>
 
* DWIConvert    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ExecutionModelTour|Execution Model Tour]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleGrindPeakImageFilter|Grayscale Grind Peak Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleModelMaker|Grayscale Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/HistogramMatching|Histogram Matching]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/LabelMapSmoothing|Label Map Smoothing]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MedianImageFilter|Median Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ModelMaker|Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ModelToLabelMap|Model To Label Map]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiplyScalarVolumes|Multiply Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/OrientScalarVolume|Orient Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/OtsuThresholdImageFilter|Otsu Threshold Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small>
 
* [[Documentation/4.4/Modules/ResampleScalarVolume|Resample Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SimpleRegionGrowingSegmentation|Simple Region Growing Segmentation]]    <small>(cli, built-in)</small>
 
* Slice Link Logic    <small>(scripted, built-in)</small>
 
* Slicer4Minute    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Spacing Aware Curvature Diffusion]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Modules/SubtractScalarVolumes|Subtract Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 
* View Controllers Slice Interpolation Bug1926
 
* [[Documentation/4.4/Modules/VotingBinaryHoleFillingImageFilter|Voting Binary Hole Filling Image Filter]]    <small>(cli, built-in)</small>
 
== Georgia Tech ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
== IBM ==
 
* [[Documentation/4.4/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 
== Isomics ==
 
* Atlas Tests
 
* [[Documentation/4.4/Extensions/IASEM|Binary Watershed Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [http://slicer.vmtk.org/ Centerline Computation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/4.4/Modules/CompareVolumes|Compare Volumes]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/Data|Data]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/DataProbe|Data Probe]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/DICOM|DICOM]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/Endoscopy|Endoscopy]]    <small>(scripted, built-in)</small>
 
* fiber visibility crash2438
 
* [[Documentation/4.4/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]]    <small>(scripted, built-in)</small>
 
* label Toggle Bug2049
 
* [[Documentation/4.4/Modules/LandmarkRegistration|Landmark Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/4.4/Modules/Models|Models]]    <small>(loadable, built-in)</small>
 
* Performance Tests
 
* [[Documentation/4.4/Extensions/Reporting|Reporting]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 
* RSNA2012Prostate Demo
 
* RSNAQuant Tutorial
 
* RSNAVis Tutorial
 
* [[Documentation/4.4/Modules/SampleData|Sample Data]]    <small>(scripted, built-in)</small>
 
* scene Import2428
 
* Self Tests
 
* [[Documentation/4.4/Modules/SimpleFilters|Simple Filters]]    <small>(scripted, built-in)</small>
 
* slicer Close Crash Bug2590
 
* [[Documentation/4.4/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small>
 
* Tractography Interactive Seeding    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/VectorToScalarVolume|Vector To Scalar Volume]]    <small>(scripted, built-in)</small>
 
* [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/4.4/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Volumes|Volumes]]    <small>(loadable, built-in)</small>
 
== Isomics Inc. ==
 
* DICOMDiffusion Volume Plugin
 
* DICOMLongitudinal PETCTPlugin
 
* DICOMScalar Volume Plugin
 
* DICOMSlicer Data Bundle Plugin
 
* Slicer MRBTest
 
* Threshold Threading Test
 
== Isomics, pieper@isomics.com ==
 
* [[Documentation/4.4/Extensions/XNATSlicer|Xnat Slicer]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] extension)</small>
 
== Kingston General Hospital ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
== Kitware ==
 
* [[Documentation/4.4/Modules/Cameras|Cameras]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Colors|Colors]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Data|Data]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/DataStore|Data Store]]    <small>(loadable, built-in)</small>
 
* Double Arrays    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/EventBroker|Event Broker]]
 
* [[Documentation/4.4/Modules/ExpertAutomatedRegistration|Expert Automated Registration]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ExtensionWizard|Extension Wizard]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/FastGrowCut|Fast Grow Cut]]    <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small>
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
* fiber visibility crash2438
 
* [[Documentation/4.4/Modules/FiducialRegistration|Fiducial Registration]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/ImageMaker|Image Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ImageMaker|Image Maker]] extension)</small>
 
* label Toggle Bug2049
 
* [[Documentation/4.4/Modules/MatlabCommander|Matlab Commander]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/4.4/Modules/MatlabModuleGenerator|Matlab Module Generator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/4.4/Modules/Models|Models]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/PortPlacement|Port Placement]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PortPlacement|Port Placement]] extension)</small>
 
* [[Documentation/4.4/Modules/Reformat|Reformat]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/SampleData|Sample Data]]    <small>(scripted, built-in)</small>
 
* Scene Performance    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/SimpleFilters|Simple Filters]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small>
 
* [[Documentation/4.4/Modules/ThresholdScalarVolume|Threshold Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/TractographyDisplay|Tractography Display]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Units|Units]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Volumes|Volumes]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Welcome|Welcome]]    <small>(loadable, built-in)</small>
 
== Kitware) ==
 
* [[Documentation/4.4/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/FinslerTractography|Finsler Tractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
== MGH ==
 
* [[Documentation/4.4/Modules/DicomSroExport|Dicom Sro Export]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Plm Register]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== MGH, Boston ==
 
* [[Documentation/4.4/Modules/DicomRtExport|Dicom Rt Export]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== Moka Creative, LLC, kumar.sunil.p@gmail.com ==
 
* [[Documentation/4.4/Extensions/XNATSlicer|Xnat Slicer]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] extension)</small>
 
== MSC/NLM ==
 
* [[Documentation/4.4/Extensions/IASEM|Label Object Statistics]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Modules/SimpleFilters|Simple Filters]]    <small>(scripted, built-in)</small>
 
== Noware ==
 
* [[Documentation/4.4/Modules/SwissSkullStripper|Swiss Skull Stripper]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]] extension)</small>
 
== Orobix ==
 
* [http://slicer.vmtk.org/ Centerline Computation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/4.4/Modules/SurfaceToolbox|Surface Toolbox]]    <small>(scripted, built-in)</small>
 
* [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
== PerkLab at Queen's University ==
 
* [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] extension)</small>
 
== PerkLab, Queen's ==
 
* [[Documentation/4.4/Extensions/MultidimData|Metafile Importer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequence Browser]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequences]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
== PerkLab, Queen's University ==
 
* [[Documentation/4.4/Modules/MatlabCommander|Matlab Commander]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/4.4/Modules/MatlabModuleGenerator|Matlab Module Generator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/4.4/Modules/PlusRemote|Plus Remote]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Model]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small>
 
== PMH ==
 
* Colors Scalar Bar Self Test
 
* [[Documentation/4.4/Extensions/MultidimData|Sequence Browser]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequences]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
== PMH, Toronto ==
 
* [[Documentation/4.4/Modules/DicomRtExport|Dicom Rt Export]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Isodose|Isodose]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== Princess Margaret Cancer Centre ==
 
* [[Documentation/4.4/Modules/DicomSroExport|Dicom Sro Export]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomSroImport|Dicom Sro Import]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== Queen's ==
 
* [[Documentation/4.4/Extensions/SlicerRT|Batch Contour Conversion]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Beams]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ContourComparison|Contour Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ContourMorphology|Contour Morphology]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Contours|Contours]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Data|Data]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/DicomRtExport|Dicom Rt Export]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomRtImport|Dicom Rt Import]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* Dicom Rt Import Self Test
 
* [[Documentation/4.4/Modules/DoseAccumulation|Dose Accumulation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseComparison|Dose Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseVolumeHistogram|Dose Volume Histogram]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo]    <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
* [[Documentation/4.4/Modules/Isodose|Isodose]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Planar Image]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/SubjectHierarchy|Subject Hierarchy]]    <small>(loadable, built-in)</small>
 
* Subject Hierarchy Core Plugins Self Test
 
* Subject Hierarchy Generic Self Test
 
* [[Documentation/4.4/Extensions/SlicerRT|Vff File Reader]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== Queen's Universit ==
 
* [[Documentation/4.4/Extensions/SlicerIGT|Fiducials To Model Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
== Queen's University ==
 
* [[Documentation/4.4/Extensions/SlicerIGT|Breach Warning]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/CollectFiducials|Collect Fiducials]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Create Models]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Dvh Comparison]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Fiducial Registration Wizard]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
* [[Documentation/4.4/Modules/OpenIGTLinkRemote|Open IGTLink Remote]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/PerkEvaluator|Perk Evaluator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Pivot Calibration]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/PerkTutor|Python Metrics Calculator]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Modules/ResectionVolume|Resection Volume]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ResectionPlanner|Resection Planner]] extension)</small>
 
* [[Documentation/4.4/Extensions/Scoliosis|Scoliosis Monitoring]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
* [[Documentation/4.4/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Transform Fusion]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/TransformRecorder|Transform Recorder]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Ultrasound Snapshots]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Roi]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small>
 
* [[Documentation/4.4/Modules/VolumeResliceDriver|Volume Reslice Driver]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/WorkflowSegmentation|Workflow Segmentation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
== Queen's University) Jaime Garcia-Guevara (Queen's University ==
 
* Breach Warning Self Test
 
* Watchdog Self Test
 
== Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto ==
 
* [[Documentation/4.4/Modules/MatlabCommander|Matlab Commander]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/4.4/Modules/MatlabModuleGenerator|Matlab Module Generator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
== RMP, PMH ==
 
* Dicom Sro Import Plugin
 
== SAIC-Frederick, NCI-Frederick ==
 
* [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
 
== SBU ==
 
* [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
== SCI Institute ==
 
* [[Documentation/4.4/Extensions/CleaverExtension|Cleaver CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]] extension)</small>
 
== Shiga University of Medical Science in Japan ==
 
* [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
== Shiga University of Medical Science, Japan, SPL ==
 
* [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small>
 
== SINAPSE ==
 
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures]    <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] extension)</small>
 
== SNR ==
 
* [[Documentation/4.4/Modules/PathExplorer|Path Explorer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/TrackerStabilizer|Tracker Stabilizer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small>
 
== SPL ==
 
* DICOM2Full Brain Tractography    <small>(scripted, built-in)</small>
 
* Label To DICOMSEGConverter Self Test
 
* [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small>
 
* [[Documentation/4.4/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small>
 
* Reporting Self Test
 
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
* [[Documentation/4.4/Modules/TrackerStabilizer|Tracker Stabilizer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small>
 
== SPL B&W Harvard ==
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small>
 
== SPL, BWH ==
 
* [[Documentation/4.4/Modules/ACPCTransform|ACPCTransform]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/BSplineToDeformationField|BSpline To Deformation Field]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/CastScalarVolume|Cast Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Colors|Colors]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Data|Data]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/DiffusionTensorScalarMeasurements|Diffusion Tensor Scalar Measurements]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]]    <small>(cli, built-in)</small>
 
* DTIexport    <small>(cli, built-in)</small>
 
* DTIimport    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIToDTIEstimation|DWITo DTIEstimation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/FiducialRegistration|Fiducial Registration]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleModelMaker|Grayscale Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ImageLabelCombine|Image Label Combine]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MaskScalarVolume|Mask Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MergeModels|Merge Models]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ModelMaker|Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Models|Models]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/ModelToLabelMap|Model To Label Map]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/4.4/Modules/ProbeVolumeWithModel|Probe Volume With Model]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/Reporting|Reporting]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 
* [[Documentation/4.4/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SceneViews|Scene Views]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
* [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] extension)</small>
 
* Test Grid Transform Registration    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ThresholdScalarVolume|Threshold Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Volumes|Volumes]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Welcome|Welcome]]    <small>(loadable, built-in)</small>
 
== SPL, BWH, UPenn ==
 
* [[Documentation/4.4/Modules/MergeModels|Merge Models]]    <small>(cli, built-in)</small>
 
== SUMS ==
 
* [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
== Surgical Planning Lab ==
 
* [[Documentation/4.4/Extensions/Reporting|Label To DICOMSEGConverter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 
== UAB ==
 
* [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
* [[Documentation/4.4/Modules/SobolevSegmenter|Sobolev Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]] extension)</small>
 
== UHN, Toronto ==
 
* [[Documentation/4.4/Modules/ContourComparison|Contour Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ContourMorphology|Contour Morphology]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Contours|Contours]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomRtImport|Dicom Rt Import]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseAccumulation|Dose Accumulation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseComparison|Dose Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseVolumeHistogram|Dose Volume Histogram]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== Uiowa ==
 
* DWIConvert    <small>(cli, built-in)</small>
 
== UIowa ==
 
* DWIConvert    <small>(cli, built-in)</small>
 
== UNC ==
 
* [[Documentation/4.4/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small>
 
* [[Documentation/4.4/Modules/PortPlacement|Port Placement]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PortPlacement|Port Placement]] extension)</small>
 
* [[Documentation/4.4/Modules/ResampleDTIVolume|Resample DTIVolume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ResampleScalarVectorDWIVolume|Resample Scalar Vector DWIVolume]]    <small>(cli, built-in)</small>
 
== Univ of Michigan ==
 
* [[Documentation/4.4/Extensions/CMFreg|Surface Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
== Univ. of Iowa ==
 
* [[Documentation/4.4/Modules/DICOMPETSUVPlugin|DICOMPETSUVPlugin]]
 
* [[Documentation/4.4/Modules/DICOMRWVMPlugin|DICOMRWVMPlugin]]
 
== University 'Magna Graecia' of Catanzaro ==
 
* [[Documentation/4.4/Extensions/SlicerRT|Plastimatch Py]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== University College Cork ==
 
 
* [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation]] extension)</small>
 
* [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation]] extension)</small>
== University of Heidelberg ==
+
* [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/AnglePlanes Angle Planes]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/AnglePlanes Angle Planes Extension] extension)</small>
* [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
== University of Iowa ==
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
== University of Iowa) and Andrey Fedorov (SPL ==
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
== UPenn ==
 
 
* [[Documentation/4.4/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
* [[Documentation/4.4/Modules/EMSegment|EMSegment]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SceneViews|Scene Views]]    <small>(loadable, built-in)</small>
 
== Utah ==
 
* [[Documentation/4.4/Modules/LabelMapSmoothing|Label Map Smoothing]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
== UVa ==
 
* [[Documentation/4.4/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIUnbiasedNonLocalMeansFilter|DWIUnbiased Non Local Means Filter]]    <small>(cli, built-in)</small>
 
== UWA ==
 
* [[Documentation/4.4/Modules/ThingiverseBrowser|Thingiverse Browser]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ThingiverseBrowser|Thingiverse Browser]] extension)</small>
 
== WashU-St. Louis, dmarcus@wustl.edu ==
 
* [[Documentation/4.4/Extensions/XNATSlicer|Xnat Slicer]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] extension)</small>
 
== while at GE ==
 
* [[Documentation/4.4/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small>
 
= Modules by contributing individual =
 
189 contributing individuals:
 
* [[#.2F|/]]
 
* [[#a|a]]
 
* [[#Akila_Viswanathan|Akila Viswanathan]]
 
* [[#Alan_Morris|Alan Morris]]    <small>(Utah)</small>
 
* [[#Alex_Yarmakovich|Alex Yarmakovich]]    <small>(Isomics)</small>
 
* [[#Alex_Yarmarkovich|Alex Yarmarkovich]]    <small>(Kitware))</small>
 
* [[#Ali_Ghayoor|Ali Ghayoor]]
 
* [[#Alireza_Mehrtash|Alireza Mehrtash]]    <small>(SPL and BWH)</small>
 
* [[#Allen_Tannenbaum|Allen Tannenbaum]]    <small>(Stony Brook University)</small>
 
* [[#Amelie_Meyer|Amelie Meyer]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Analysis_Laboratory|Analysis Laboratory]]
 
* [[#Andinet_Enquobahrie|Andinet Enquobahrie]]    <small>(Kitware)</small>
 
* [[#Andras_Lasso|Andras Lasso]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Andreas_Freudling|Andreas Freudling]]    <small>(SPL, BWH)</small>
 
* [[#Andrey_Fedorov|Andrey Fedorov]]    <small>(SPL B&W Harvard)</small>
 
* [[#Andriy_Kot|Andriy Kot]]    <small>(CRTC)</small>
 
* [[#Anonymous|Anonymous]]
 
* [[#Antonio_Damato|Antonio Damato]]
 
* [[#Antonio_Tristan_Vega|Antonio Tristan Vega]]    <small>(UVa)</small>
 
* [[#Anuja_Sharma|Anuja Sharma]]
 
* [[#Arie_Nakhmani|Arie Nakhmani]]    <small>(UAB)</small>
 
* [[#Atsushi_Yamada|Atsushi Yamada]]    <small>(SNR)</small>
 
* [[#Beatriz_Paniagua_from_Department_of_Orthodontics|Beatriz Paniagua from Department of Orthodontics]]    <small>(UNC)</small>
 
* [[#Benjamin_Long|Benjamin Long]]    <small>(Kitware)</small>
 
* [[#Benjamin_Yvernault|Benjamin Yvernault]]
 
* [[#Bill_Lorensen|Bill Lorensen]]    <small>(Noware)</small>
 
* [[#Brad_Davis|Brad Davis]]
 
* [[#Bradley_Lowekamp|Bradley Lowekamp]]    <small>(MSC/NLM)</small>
 
* [[#Brian_Zenger|Brian Zenger]]    <small>(CARMA)</small>
 
* [[#BWH|BWH]]
 
* [[#c|c]]
 
* [[#Carl-Fredrik_Westin|Carl-Fredrik Westin]]
 
* [[#Carl-Fredrik_Westin._The_directional_iterators_were_contributed_by_Luis_Ibanez|Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez]]    <small>(Kitware))</small>
 
* [[#Casey_B_Goodlett|Casey B Goodlett]]    <small>(Kitware)</small>
 
* [[#Charles_Marion|Charles Marion]]    <small>(Kitware)</small>
 
* [[#Christian_Bauer|Christian Bauer]]    <small>(University of Iowa)</small>
 
* [[#Christian_Baumgartner|Christian Baumgartner]]
 
* [[#Csaba_Pinter|Csaba Pinter]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Dan_Marcus|Dan Marcus]]    <small>(Washington University in St. Louis)</small>
 
* [[#Daniel_Blezek|Daniel Blezek]]    <small>(GE)</small>
 
* [[#Daniel_Haehn|Daniel Haehn]]    <small>(UPenn)</small>
 
* [[#Danny_Perry|Danny Perry]]    <small>(Utah)</small>
 
* [[#Demian_Wassermann|Demian Wassermann]]    <small>(Brigham and Women's Hospital)</small>
 
* [[#Dinggang_Shen|Dinggang Shen]]    <small>(UNC)</small>
 
* [[#Dirk_Padfield|Dirk Padfield]]    <small>(GE)</small>
 
* [[#Dominik_Meier|Dominik Meier]]    <small>(SPL, BWH)</small>
 
* [[#e|e]]
 
* [[#er|er]]    <small>(Kingston General Hospital)</small>
 
* [[#Ethan_Ulrich|Ethan Ulrich]]    <small>(Univ. of Iowa)</small>
 
* [[#Eugene_Kholmovski|Eugene Kholmovski]]    <small>(CARMA)</small>
 
* [[#ez|ez]]    <small>(UVa)</small>
 
* [[#Fotis_Drakopoulos|Fotis Drakopoulos]]    <small>(CRTC)</small>
 
* [[#Francois_Budin|Francois Budin]]    <small>(NIRAL, UNC)</small>
 
* [[#Franklin_King|Franklin King]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Greg_Gardner|Greg Gardner]]    <small>(Utah)</small>
 
* [[#Greg_Harris|Greg Harris]]
 
* [[#Greg_Sharp|Greg Sharp]]    <small>(MGH, Boston)</small>
 
* [[#Gregory_Sharp|Gregory Sharp]]    <small>(MGH)</small>
 
* [[#Guido_Gerig|Guido Gerig]]    <small>(UNC)</small>
 
* [[#Guillaume_Pernelle|Guillaume Pernelle]]
 
* [[#Hans_J._Johnson|Hans J. Johnson]]
 
* [[#Hans_Johnson|Hans Johnson]]    <small>(SINAPSE)</small>
 
* [[#hans-johnson_-at-_uiowa.edu|hans-johnson -at- uiowa.edu]]
 
* [[#http:.2F.2Fwww.psychiatry.uiowa.edu|http://www.psychiatry.uiowa.edu]]
 
* [[#i|i]]
 
* [[#Ipek_Oguz|Ipek Oguz]]
 
* [[#Ivan_Kolesov|Ivan Kolesov]]    <small>(Stony Brook University)</small>
 
* [[#Jan_Egger|Jan Egger]]
 
* [[#Jayender_Jagadeesan|Jayender Jagadeesan]]    <small>(BWH)</small>
 
* [[#Jean-Baptiste_Berger|Jean-Baptiste Berger]]    <small>(Kitware)</small>
 
* [[#Jean-Christophe_Fillion-Robin|Jean-Christophe Fillion-Robin]]    <small>(Kitware)</small>
 
* [[#Jennifer_Andrea|Jennifer Andrea]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Jessica_Forbes|Jessica Forbes]]    <small>(SINAPSE)</small>
 
* [[#Jim_Miller|Jim Miller]]    <small>(GE)</small>
 
* [[#Johan_Andruejol|Johan Andruejol]]    <small>(Kitware)</small>
 
* [[#John_Buatti|John Buatti]]    <small>(University of Iowa)</small>
 
* [[#John_Evans|John Evans]]    <small>(MGH)</small>
 
* [[#Jonathan_Bronson|Jonathan Bronson]]    <small>(SCI Institute)</small>
 
* [[#Josh_Cates|Josh Cates]]    <small>(Utah)</small>
 
* [[#Joy_Matsui|Joy Matsui]]    <small>(UIowa)</small>
 
* [[#Julien_Finet|Julien Finet]]    <small>(Kitware)</small>
 
* [[#Julien_Jomier|Julien Jomier]]    <small>(Kitware)</small>
 
* [[#Junichi_Tokuda|Junichi Tokuda]]    <small>(BWH)</small>
 
* [[#K|K]]
 
* [[#Kent_Williams|Kent Williams]]    <small>(UIowa)</small>
 
* [[#Kent_WIlliams|Kent WIlliams]]
 
* [[#Kevin_Alex|Kevin Alex]]    <small>(Kingston General Hospital)</small>
 
* [[#Kevin_Wang|Kevin Wang]]    <small>(Princess Margaret Cancer Centre)</small>
 
* [[#Kilian_Pohl|Kilian Pohl]]    <small>(UPenn)</small>
 
* [[#Koichiro_Murakami|Koichiro Murakami]]    <small>(SUMS)</small>
 
* [[#Kyle_Sunderl|Kyle Sunderl]]    <small>(Queen's University)</small>
 
* [[#l|l]]
 
* [[#Lauren_Barber|Lauren Barber]]
 
* [[#Lauren_O_Donnell|Lauren O'Donnell]]    <small>(SPL, BWH)</small>
 
* [[#Laurent_Chauvin|Laurent Chauvin]]    <small>(BWH)</small>
 
* [[#Liang-Jia_Zhu|Liang-Jia Zhu]]    <small>(UAB)</small>
 
* [[#Liangjia_Zhu|Liangjia Zhu]]    <small>(Stony Brook University)</small>
 
* [[#Luca_Antiga|Luca Antiga]]    <small>(Orobix)</small>
 
* [[#Luis_G._Torres|Luis G. Torres]]    <small>(UNC)</small>
 
* [[#Luping_Fang|Luping Fang]]    <small>(College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)</small>
 
* [[#m|m]]
 
* [[#Marc_Niethammer|Marc Niethammer]]    <small>(UNC)</small>
 
* [[#Marcel_Prastawa_prastawa.40sci.utah.edu|Marcel Prastawa prastawa@sci.utah.edu]]
 
* [[#Mark_Scully|Mark Scully]]    <small>(Uiowa)</small>
 
* [[#Markus_Van_Tol|Markus Van Tol]]    <small>(University of Iowa) and Andrey Fedorov (SPL)</small>
 
* [[#Markus_van_Tol|Markus van Tol]]    <small>(University of Iowa)</small>
 
* [[#Martin_Styner|Martin Styner]]    <small>(UNC)</small>
 
* [[#Mason_Winsauer|Mason Winsauer]]
 
* [[#Matt_Lougheed|Matt Lougheed]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Mattea_Welch|Mattea Welch]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Matthew_Holden|Matthew Holden]]    <small>(Queen's University)</small>
 
* [[#Matthew_S._Holden|Matthew S. Holden]]    <small>(Queen's University)</small>
 
* [[#Matthew_Woehlke|Matthew Woehlke]]    <small>(Kitware)</small>
 
* [[#Michael_Jeulin-Lagarrigue|Michael Jeulin-Lagarrigue]]    <small>(Kitware)</small>
 
* [[#Minjeong_Kim|Minjeong Kim]]    <small>(UNC)</small>
 
* [[#Nabgha_Fahrat|Nabgha Fahrat]]
 
* [[#Neuro_Image_Resarch|Neuro Image Resarch]]
 
* [[#Nicholas_Herlambang|Nicholas Herlambang]]    <small>(AZE R&D)</small>
 
* [[#Nick_Tustison|Nick Tustison]]    <small>(UPenn)</small>
 
* [[#Nicole_Aucoin|Nicole Aucoin]]    <small>(BWH)</small>
 
* [[#Nigel_Goh|Nigel Goh]]    <small>(UWA)</small>
 
* [[#Nikos_Chrisochoides|Nikos Chrisochoides]]    <small>(CRTC)</small>
 
* [[#Olivier_Clatz|Olivier Clatz]]    <small>(Asclepios INRIA) and Nikos Chrisochoides (CRTC)</small>
 
* [[#p|p]]
 
* [[#Paolo_Zaffino|Paolo Zaffino]]    <small>(University 'Magna Graecia' of Catanzaro)</small>
 
* [[#Pat_Marion|Pat Marion]]    <small>(Kitware)</small>
 
* [[#Paul_Mercea|Paul Mercea]]    <small>(University of Heidelberg)</small>
 
* [[#Pengdong_Xiao|Pengdong Xiao]]    <small>(Department of Orthodontics, UNC)</small>
 
* [[#Peter_Black|Peter Black]]    <small>(BWH)</small>
 
* [[#Peter_Karasev|Peter Karasev]]    <small>(Georgia Tech)</small>
 
* [[#Peter_Savadjiev|Peter Savadjiev]]    <small>(Kitware))</small>
 
* [[#Pierre_Seroul|Pierre Seroul]]    <small>(UNC)</small>
 
* [[#Pietro_Nardelli|Pietro Nardelli]]    <small>(University College Cork)</small>
 
* [[#Please_direct_questions_or_suggestions_to_http:.2F.2Fgroups.google.com.2Fgroup.2Fplastimatch|Please direct questions or suggestions to http://groups.google.com/group/plastimatch]]
 
* [[#Polina_Goll|Polina Goll]]
 
* [[#Qing_Pan|Qing Pan]]    <small>(College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)</small>
 
* [[#r|r]]
 
* [[#R|R]]
 
* [[#Raul_San_Jose|Raul San Jose]]    <small>(SPL, BWH)</small>
 
* [[#Reinhard_Beichel|Reinhard Beichel]]    <small>(University of Iowa)</small>
 
* [[#Rob_MacLeod|Rob Mac Leod]]    <small>(Utah)</small>
 
* [[#Ron_Kikinis|Ron Kikinis]]    <small>(BWH)</small>
 
* [[#Ross_Whitaker|Ross Whitaker]]    <small>(Utah)</small>
 
* [[#Ruifeng_Chen|Ruifeng Chen]]    <small>(College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)</small>
 
* [[#S|S]]
 
* [[#Salma_Bengali|Salma Bengali]]    <small>(CARMA)</small>
 
* [[#Sam_Song|Sam Song]]
 
* [[#Santiago_Aja_Fern|Santiago Aja Fern]]    <small>(UVa)</small>
 
* [[#Sebastien_Barr_eacute.3B|Sebastien Barr&eacute;]]    <small>(Kitware)</small>
 
* [[#Sebastien_Barre|Sebastien Barre]]
 
* [[#Shigeyuki_Naka|Shigeyuki Naka]]    <small>(SUMS)</small>
 
* [[#Soichiro_Tani|Soichiro Tani]]    <small>(BWH, SUMS)</small>
 
* [[#Sonia_Pujol|Sonia Pujol]]    <small>(SPL, BWH)</small>
 
* [[#Stefan_Lienhard|Stefan Lienhard]]
 
* [[#Stephen_Aylward|Stephen Aylward]]    <small>(Kitware)</small>
 
* [[#Stephen_R_Aylward|Stephen R Aylward]]    <small>(Kitware)</small>
 
* [[#Steve_Pieper|Steve Pieper]]    <small>(SPL)</small>
 
* [[#Sunil_Kumar|Sunil Kumar]]    <small>(Moka Creative, LLC, kumar.sunil.p@gmail.com)</small>
 
* [[#Sylvain_Bouix|Sylvain Bouix]]    <small>(BWH)</small>
 
* [[#Sylvain_Gouttard|Sylvain Gouttard]]
 
* [[#t|t]]
 
* [[#Tamas_Ungi|Tamas Ungi]]    <small>(PerkLab, Queen's University)</small>
 
* [[#the_University_of_North_Carolina_at_Chapel_Hill|the University of North Carolina at Chapel Hill]]    <small>(UNC)</small>
 
* [[#Tina_Kapur|Tina Kapur]]
 
* [[#Tobias_Penzkofer|Tobias Penzkofer]]
 
* [[#Tohru_Tani|Tohru Tani]]    <small>(SUMS)</small>
 
* [[#UNC_Medical_School|UNC Medical School]]
 
* [[#UofM_School_Of_Dentistry|Uof M School Of Dentistry]]
 
* [[#UofM_School_of_Dentistry|Uof M School of Dentistry]]
 
* [[#Vince_Magnotta|Vince Magnotta]]    <small>(UIowa)</small>
 
* [[#Vincent_A._Magnotta|Vincent A. Magnotta]]
 
* [[#Vincent_Magnotta|Vincent Magnotta]]
 
* [[#Vinicius_Boen|Vinicius Boen]]    <small>(Univ of Michigan)</small>
 
* [[#Vivek_Narayan|Vivek Narayan]]    <small>(BWH)</small>
 
* [[#Wendy_Plesniak|Wendy Plesniak]]    <small>(SPL, BWH)</small>
 
* [[#Xiaodong_Tao|Xiaodong Tao]]    <small>(GE)</small>
 
* [[#Xiaofeng_Liu|Xiaofeng Liu]]    <small>(GE GLobal Research)</small>
 
* [[#Xiaojun_Chen|Xiaojun Chen]]
 
* [[#y_Wells|y Wells]]
 
* [[#Yanling_Liu|Yanling Liu]]    <small>(SAIC-Frederick, NCI-Frederick)</small>
 
* [[#Yi_Gao|Yi Gao]]    <small>(BWH/UAB)</small>
 
* [[#Yinglin_Lee|Yinglin Lee]]    <small>(SPL, BWH)</small>
 
* [[#Yingxuan_Zhu|Yingxuan Zhu]]    <small>(GE)</small>
 
* [[#Yinpeng_Li|Yinpeng Li]]
 
* [[#Yixun_Liu|Yixun Liu]]    <small>(CRTC)</small>
 
* [[#Yogesh_Rathi|Yogesh Rathi]]    <small>(yogesh@bwh.harvard.edu)</small>
 
* [[#Yong_Zhang|Yong Zhang]]    <small>(IBM)</small>
 
* [[#Yumin_Yuan|Yumin Yuan]]
 
* [[#Yundi_Shi|Yundi Shi]]
 
== / ==
 
* Dicom Rt Import Plugin
 
== a ==
 
* Dicom Rt Import Plugin
 
== Akila Viswanathan ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
== Alan Morris ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Boolean REMOVEFilter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Connected Threshold Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Isolated Connected Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
* [[Documentation/4.4/Modules/LASegmentationWorkflow|LASegmentation Workflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/ScarVisualization|Scar Visualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
== Alex Yarmakovich ==
 
* [[Documentation/4.4/Modules/Models|Models]]    <small>(loadable, built-in)</small>
 
* Tractography Interactive Seeding    <small>(loadable, built-in)</small>
 
== Alex Yarmarkovich ==
 
* [[Documentation/4.4/Modules/Data|Data]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/FinslerTractography|Finsler Tractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/ImageLabelCombine|Image Label Combine]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Volumes|Volumes]]    <small>(loadable, built-in)</small>
 
== Ali Ghayoor ==
 
* BRAINSTransform Convert    <small>(cli, built-in)</small>
 
* Perform Metric Test    <small>(cli, built-in)</small>
 
== Alireza Mehrtash ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
* [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] extension)</small>
 
== Allen Tannenbaum ==
 
* [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
* [[Documentation/4.4/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
* [[Documentation/4.4/Modules/SobolevSegmenter|Sobolev Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]] extension)</small>
 
== Amelie Meyer ==
 
* [[Documentation/4.4/Modules/PlusRemote|Plus Remote]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
== Analysis Laboratory ==
 
 
* [[Documentation/4.4/Extensions/CMFreg|Apply Matrix]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Extensions/CMFreg|Apply Matrix]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
* [[Documentation/4.4/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
+
* [[Documentation/4.4/Extensions/SlicerRT|Beams]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
* [[Documentation/4.4/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelAddition|Label Addition]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelExtraction|Label Extraction]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
== Andinet Enquobahrie ==
 
* [[Documentation/4.4/Modules/PortPlacement|Port Placement]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PortPlacement|Port Placement]] extension)</small>
 
== Andras Lasso ==
 
* [[Documentation/4.4/Modules/ContourComparison|Contour Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ContourMorphology|Contour Morphology]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Contours|Contours]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomRtExport|Dicom Rt Export]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomRtImport|Dicom Rt Import]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseAccumulation|Dose Accumulation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseComparison|Dose Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseVolumeHistogram|Dose Volume Histogram]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Isodose|Isodose]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/MatlabCommander|Matlab Commander]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/4.4/Modules/MatlabModuleGenerator|Matlab Module Generator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Metafile Importer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Modules/PlusRemote|Plus Remote]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequence Browser]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequences]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Model]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small>
 
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Roi]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small>
 
== Andreas Freudling ==
 
* [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
 
== Andrey Fedorov ==
 
* [[Documentation/4.4/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Modules/BSplineToDeformationField|BSpline To Deformation Field]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ChangeTracker|Change Tracker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
* Change Tracker Self Test
 
* [[Documentation/4.4/Modules/CropVolume|Crop Volume]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/DICOMRWVMPlugin|DICOMRWVMPlugin]]
 
* DICOMSegmentation Plugin
 
* [[Documentation/4.4/Modules/IntensityDifferenceMetric|Intensity Difference Metric]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
* [[Documentation/4.4/Extensions/Reporting|Label To DICOMSEGConverter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 
* Label To DICOMSEGConverter Self Test
 
* [[Documentation/4.4/Modules/MeshCompression|Mesh Compression]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
 
* Multi Volume Importer Plugin
 
* [[Documentation/4.4/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small>
 
* [[Documentation/4.4/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small>
 
* [[Documentation/4.4/Extensions/Reporting|Reporting]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 
* Reporting Self Test
 
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
* [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] extension)</small>
 
* [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small>
 
== Andriy Kot ==
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small>
 
== Anonymous ==
 
* CLIROITest    <small>(cli, built-in)</small>
 
* EMSegment Transform To New Format    <small>(cli, built-in)</small>
 
== Antonio Damato ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
== Antonio Tristan Vega ==
 
* [[Documentation/4.4/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIUnbiasedNonLocalMeansFilter|DWIUnbiased Non Local Means Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/FinslerTractography|Finsler Tractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
== Anuja Sharma ==
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
== Arie Nakhmani ==
 
* [[Documentation/4.4/Modules/SobolevSegmenter|Sobolev Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]] extension)</small>
 
== Atsushi Yamada ==
 
* [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
* [[Documentation/4.4/Modules/PathExplorer|Path Explorer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
== Beatriz Paniagua from Department of Orthodontics ==
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small>
 
== Benjamin Long ==
 
* [[Documentation/4.4/Modules/SampleData|Sample Data]]    <small>(scripted, built-in)</small>
 
== Benjamin Yvernault ==
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
== Bill Lorensen ==
 
* [[Documentation/4.4/Modules/AddScalarVolumes|Add Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/CheckerBoardFilter|Checker Board Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/CreateDICOMSeries|Create DICOMSeries]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
* Diffusion Tensor Test    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ExecutionModelTour|Execution Model Tour]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleGrindPeakImageFilter|Grayscale Grind Peak Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleModelMaker|Grayscale Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/HistogramMatching|Histogram Matching]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MedianImageFilter|Median Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ModelMaker|Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiplyScalarVolumes|Multiply Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/OrientScalarVolume|Orient Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/OtsuThresholdImageFilter|Otsu Threshold Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ResampleScalarVolume|Resample Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Spacing Aware Curvature Diffusion]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Modules/SubtractScalarVolumes|Subtract Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SwissSkullStripper|Swiss Skull Stripper]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]] extension)</small>
 
* [[Documentation/4.4/Modules/VotingBinaryHoleFillingImageFilter|Voting Binary Hole Filling Image Filter]]    <small>(cli, built-in)</small>
 
== Brad Davis ==
 
* EMSegment Command Line    <small>(cli, built-in)</small>
 
== Bradley Lowekamp ==
 
 
* [[Documentation/4.4/Extensions/IASEM|Bin Shrink]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Bin Shrink]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
* [[Documentation/4.4/Extensions/IASEM|Double Threshold Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|IASEMImport]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|IASEMImport Series]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Label Object Statistics]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Modules/SimpleFilters|Simple Filters]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Spacing Aware Curvature Diffusion]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
== Brian Zenger ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
== BWH ==
 
* DICOMSegmentation Plugin
 
* Multi Volume Importer Plugin
 
== c ==
 
* Dicom Rt Import Plugin
 
== Carl-Fredrik Westin ==
 
* [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
== Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez ==
 
* [[Documentation/4.4/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/FinslerTractography|Finsler Tractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
== Casey B Goodlett ==
 
* [[Documentation/4.4/Modules/ExpertAutomatedRegistration|Expert Automated Registration]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/FiducialRegistration|Fiducial Registration]]    <small>(cli, built-in)</small>
 
== Charles Marion ==
 
* [[Documentation/4.4/Modules/DataStore|Data Store]]    <small>(loadable, built-in)</small>
 
== Christian Bauer ==
 
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
== Christian Baumgartner ==
 
* [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
== Csaba Pinter ==
 
* [[Documentation/4.4/Extensions/SlicerRT|Batch Contour Conversion]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Beams]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ContourComparison|Contour Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ContourMorphology|Contour Morphology]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Contours|Contours]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Data|Data]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/DicomRtExport|Dicom Rt Export]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomRtImport|Dicom Rt Import]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* Dicom Rt Import Self Test
 
* [[Documentation/4.4/Modules/DoseAccumulation|Dose Accumulation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseComparison|Dose Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseVolumeHistogram|Dose Volume Histogram]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Dvh Comparison]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo]    <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
* [[Documentation/4.4/Modules/Isodose|Isodose]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Planar Image]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/SubjectHierarchy|Subject Hierarchy]]    <small>(loadable, built-in)</small>
 
* Subject Hierarchy Core Plugins Self Test
 
* Subject Hierarchy Generic Self Test
 
* [[Documentation/4.4/Extensions/SlicerRT|Vff File Reader]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== Dan Marcus ==
 
* [[Documentation/4.4/Extensions/XNATSlicer|Xnat Slicer]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] extension)</small>
 
== Daniel Blezek ==
 
* [[Documentation/4.4/Modules/ExecutionModelTour|Execution Model Tour]]    <small>(cli, built-in)</small>
 
== Daniel Haehn ==
 
* [[Documentation/4.4/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 
* [http://slicer.vmtk.org/ Centerline Computation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/4.4/Modules/EMSegment|EMSegment]]    <small>(loadable, built-in)</small>
 
* EMSegment Command Line    <small>(cli, built-in)</small>
 
* [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/4.4/Modules/MergeModels|Merge Models]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SceneViews|Scene Views]]    <small>(loadable, built-in)</small>
 
* [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
== Danny Perry ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
== Demian Wassermann ==
 
* DICOM2Full Brain Tractography    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]]    <small>(cli, built-in)</small>
 
* Fiber Bundle Label Select    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/FinslerTractography|Finsler Tractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* test tractography display
 
* [[Documentation/4.4/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]]    <small>(cli, built-in)</small>
 
== Dinggang Shen ==
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Testing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Training]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
 
== Dirk Padfield ==
 
* [[Documentation/4.4/Modules/LabelMapSmoothing|Label Map Smoothing]]    <small>(cli, built-in)</small>
 
== Dominik Meier ==
 
* [[Documentation/4.4/Modules/FiducialRegistration|Fiducial Registration]]    <small>(cli, built-in)</small>
 
== e ==
 
* Dicom Rt Import Plugin
 
== er ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
== Ethan Ulrich ==
 
* [[Documentation/4.4/Modules/DICOMPETSUVPlugin|DICOMPETSUVPlugin]]
 
* [[Documentation/4.4/Modules/DICOMRWVMPlugin|DICOMRWVMPlugin]]
 
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
== Eugene Kholmovski ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
== ez ==
 
* [[Documentation/4.4/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIUnbiasedNonLocalMeansFilter|DWIUnbiased Non Local Means Filter]]    <small>(cli, built-in)</small>
 
== Fotis Drakopoulos ==
 
 
* [[Documentation/4.4/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
* [[Documentation/4.4/Modules/MeshCompression|Mesh Compression]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small>
 
== Francois Budin ==
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small>
 
* [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]] extension)</small>
 
* [[Documentation/4.4/Modules/ResampleDTIVolume|Resample DTIVolume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ResampleScalarVectorDWIVolume|Resample Scalar Vector DWIVolume]]    <small>(cli, built-in)</small>
 
== Franklin King ==
 
* [[Documentation/4.4/Modules/CollectFiducials|Collect Fiducials]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Pivot Calibration]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/PlusRemote|Plus Remote]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/Scoliosis|Scoliosis Monitoring]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
* [[Documentation/4.4/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Transform Fusion]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
== Greg Gardner ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
== Greg Harris ==
 
* [[Documentation/4.4/Modules/BRAINSDemonWarp|BRAINSDemon Warp]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/BRAINSResample|BRAINSResample]]    <small>(cli, built-in)</small>
 
* VBRAINSDemon Warp    <small>(cli, built-in)</small>
 
== Greg Sharp ==
 
* [[Documentation/4.4/Modules/DicomRtExport|Dicom Rt Export]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== Gregory Sharp ==
 
* [[Documentation/4.4/Modules/DicomSroExport|Dicom Sro Export]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Plm Register]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== Guido Gerig ==
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli, built-in)</small>
 
== Guillaume Pernelle ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
== Hans J. Johnson ==
 
 
* [[Documentation/4.4/Modules/BRAINSDemonWarp|BRAINSDemon Warp]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/BRAINSDemonWarp|BRAINSDemon Warp]]    <small>(cli, built-in)</small>
 +
* BRAINSDWICleanup    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/BRAINSFit|BRAINSFit]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/BRAINSFit|BRAINSFit]]    <small>(cli, built-in)</small>
* BRAINSROIAuto   <small>(cli, built-in)</small>
+
* BRAINSLabel Stats   <small>(cli, built-in)</small>
* BRAINSTransform Convert    <small>(cli, built-in)</small>
 
* VBRAINSDemon Warp    <small>(cli, built-in)</small>
 
== Hans Johnson ==
 
 
* [[Documentation/4.4/Modules/BRAINSResample|BRAINSResample]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/BRAINSResample|BRAINSResample]]    <small>(cli, built-in)</small>
 
* BRAINSResize    <small>(cli, built-in)</small>
 
* BRAINSResize    <small>(cli, built-in)</small>
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures]    <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] extension)</small>
 
* DWIConvert    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
* [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
== hans-johnson -at- uiowa.edu ==
 
* [[Documentation/4.4/Modules/BRAINSFit|BRAINSFit]]    <small>(cli, built-in)</small>
 
 
* BRAINSROIAuto    <small>(cli, built-in)</small>
 
* BRAINSROIAuto    <small>(cli, built-in)</small>
== http://www.psychiatry.uiowa.edu ==
+
* BRAINSStrip Rotation   <small>(cli, built-in)</small>
* [[Documentation/4.4/Modules/BRAINSFit|BRAINSFit]]   <small>(cli, built-in)</small>
+
* BRAINSTransform Convert   <small>(cli, built-in)</small>
* BRAINSROIAuto   <small>(cli, built-in)</small>
+
* [[Documentation/4.4/Extensions/SlicerIGT|Breach Warning]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
== i ==
+
* [http://wiki.slicer.org/wiki/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]    <small>(loadable, bundled in [http://wiki.slicer.org/wiki/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
* Dicom Rt Import Plugin
+
* [[Documentation/4.4/Modules/CastScalarVolume|Cast Scalar Volume]]    <small>(cli, built-in)</small>
== Ipek Oguz ==
+
* [http://slicer.vmtk.org/ Centerline Computation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
* [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
+
* [[Documentation/4.4/Modules/ChangeTracker|Change Tracker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small>
* [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]] extension)</small>
+
* [[Documentation/4.4/Modules/CheckerBoardFilter|Checker Board Filter]]    <small>(cli, built-in)</small>
* [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
== Ivan Kolesov ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
== Jan Egger ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
== Jayender Jagadeesan ==
 
* [[Documentation/4.4/Modules/HeterogeneityCAD|Heterogeneity CAD]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small>
 
* [[Documentation/4.4/Modules/SegmentCAD|Segment CAD]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small>
 
* [[Documentation/4.4/Modules/TrackerStabilizer|Tracker Stabilizer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small>
 
== Jean-Baptiste Berger ==
 
* [[Documentation/4.4/Modules/DataStore|Data Store]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Fiber Compare]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Merge Stat With Fiber]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
== Jean-Christophe Fillion-Robin ==
 
* CLI4Test
 
* [[Documentation/4.4/Modules/DataStore|Data Store]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/FastGrowCut|Fast Grow Cut]]    <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small>
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
* fiber visibility crash2438
 
* label Toggle Bug2049
 
* [[Documentation/4.4/Modules/MatlabCommander|Matlab Commander]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/4.4/Modules/MatlabModuleGenerator|Matlab Module Generator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/SampleData|Sample Data]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/SimpleFilters|Simple Filters]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small>
 
* [[Documentation/4.4/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Welcome|Welcome]]    <small>(loadable, built-in)</small>
 
== Jennifer Andrea ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Vff File Reader]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== Jessica Forbes ==
 
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures]    <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] extension)</small>
 
== Jim Miller ==
 
* Charting    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small>
 
* [[Documentation/4.4/Modules/SimpleRegionGrowingSegmentation|Simple Region Growing Segmentation]]    <small>(cli, built-in)</small>
 
* Slice Link Logic    <small>(scripted, built-in)</small>
 
* Slicer4Minute    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 
* View Controllers Slice Interpolation Bug1926
 
== Johan Andruejol ==
 
* [[Documentation/4.4/Modules/Units|Units]]    <small>(loadable, built-in)</small>
 
== John Buatti ==
 
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
== John Evans ==
 
* [[Documentation/4.4/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small>
 
== Jonathan Bronson ==
 
 
* [[Documentation/4.4/Extensions/CleaverExtension|Cleaver CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]] extension)</small>
 
* [[Documentation/4.4/Extensions/CleaverExtension|Cleaver CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]] extension)</small>
== Josh Cates ==
 
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
Line 1,664: Line 552:
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
* [[Documentation/4.4/Modules/LabelMapSmoothing|Label Map Smoothing]]    <small>(cli, built-in)</small>
+
* [[Documentation/4.4/Modules/CollectFiducials|Collect Fiducials]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
* [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
* [[Documentation/4.4/Modules/LASegmentationWorkflow|LASegmentation Workflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/ScarVisualization|Scar Visualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
== Joy Matsui ==
 
* DWIConvert    <small>(cli, built-in)</small>
 
== Julien Finet ==
 
* [[Documentation/4.4/Modules/Cameras|Cameras]]    <small>(loadable, built-in)</small>
 
 
* [[Documentation/4.4/Modules/Colors|Colors]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Colors|Colors]]    <small>(loadable, built-in)</small>
* [[Documentation/4.4/Modules/Data|Data]]    <small>(loadable, built-in)</small>
+
* [[Documentation/4.4/Modules/CompareVolumes|Compare Volumes]]    <small>(scripted, built-in)</small>
* Double Arrays    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/EventBroker|Event Broker]]
 
* [[Documentation/4.4/Extensions/ImageMaker|Image Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ImageMaker|Image Maker]] extension)</small>
 
* [[Documentation/4.4/Modules/Models|Models]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
 
* Scene Performance    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/ThresholdScalarVolume|Threshold Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/TractographyDisplay|Tractography Display]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Units|Units]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Volumes|Volumes]]    <small>(loadable, built-in)</small>
 
== Julien Jomier ==
 
* [[Documentation/4.4/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]]    <small>(cli, built-in)</small>
 
== Junichi Tokuda ==
 
* [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
* [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]] extension)</small>
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Dilate Label]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Label]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
 
* [[Documentation/4.4/Modules/PathExplorer|Path Explorer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small>
 
* [[Documentation/4.4/Modules/VolumeResliceDriver|Volume Reslice Driver]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
== K ==
 
* Dicom Rt Import Plugin
 
== Kent Williams ==
 
* BRAINSDWICleanup    <small>(cli, built-in)</small>
 
* BRAINSTransform Convert    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* DWIConvert    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
== Kent WIlliams ==
 
* BRAINSStrip Rotation    <small>(cli, built-in)</small>
 
== Kevin Alex ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
== Kevin Wang ==
 
* Colors Scalar Bar Self Test
 
 
* [[Documentation/4.4/Modules/ContourComparison|Contour Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ContourComparison|Contour Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ContourMorphology|Contour Morphology]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ContourMorphology|Contour Morphology]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Contours|Contours]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Contours|Contours]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
* [[Documentation/4.4/Modules/DicomRtExport|Dicom Rt Export]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
+
* [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
* [[Documentation/4.4/Modules/DicomRtImport|Dicom Rt Import]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomSroExport|Dicom Sro Export]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomSroImport|Dicom Sro Import]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* Dicom Sro Import Plugin
 
* [[Documentation/4.4/Modules/DoseAccumulation|Dose Accumulation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseComparison|Dose Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseVolumeHistogram|Dose Volume Histogram]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Isodose|Isodose]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/MatlabCommander|Matlab Commander]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/4.4/Modules/MatlabModuleGenerator|Matlab Module Generator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequence Browser]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequences]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
== Kilian Pohl ==
 
* [[Documentation/4.4/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/ChangeTracker|Change Tracker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
* [[Documentation/4.4/Modules/EMSegment|EMSegment]]    <small>(loadable, built-in)</small>
 
* EMSegment Command Line    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SceneViews|Scene Views]]    <small>(loadable, built-in)</small>
 
== Koichiro Murakami ==
 
 
* [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
* [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
* [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small>
+
* [[Documentation/4.4/Modules/CreateDICOMSeries|Create DICOMSeries]]    <small>(cli, built-in)</small>
== Kyle Sunderl ==
+
* [[Documentation/4.4/Extensions/SlicerIGT|Create Models]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
* [[Documentation/4.4/Extensions/SlicerRT|Dvh Comparison]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
+
* [[Documentation/4.4/Modules/CropVolume|Crop Volume]]    <small>(loadable, built-in)</small>
== l ==
+
* [[Documentation/4.4/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]]    <small>(cli, built-in)</small>
* Dicom Rt Import Plugin
 
== Lauren Barber ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
== Lauren O'Donnell ==
 
* Fiber Bundle Label Select    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ProbeVolumeWithModel|Probe Volume With Model]]    <small>(cli, built-in)</small>
 
== Laurent Chauvin ==
 
 
* [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]] extension)</small>
 
* [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]] extension)</small>
* [[Documentation/4.4/Modules/DiceComputation|Dice Computation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]] extension)</small>
 
* [[Documentation/4.4/Modules/PathExplorer|Path Explorer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small>
 
* [[Documentation/4.4/Modules/TrackerStabilizer|Tracker Stabilizer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small>
 
== Liang-Jia Zhu ==
 
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
== Liangjia Zhu ==
 
* [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
== Luca Antiga ==
 
* [http://slicer.vmtk.org/ Centerline Computation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/4.4/Modules/SurfaceToolbox|Surface Toolbox]]    <small>(scripted, built-in)</small>
 
* [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
== Luis G. Torres ==
 
* [[Documentation/4.4/Modules/PortPlacement|Port Placement]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PortPlacement|Port Placement]] extension)</small>
 
== Luping Fang ==
 
* [[Documentation/4.4/Modules/GyroGuide|Gyro Guide]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]] extension)</small>
 
== m ==
 
* Dicom Rt Import Plugin
 
== Marc Niethammer ==
 
* [[Documentation/4.4/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]]    <small>(cli, built-in)</small>
 
== Marcel Prastawa prastawa@sci.utah.edu ==
 
* [http://www.nitrc.org/projects/abc ABC]    <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small>
 
== Mark Scully ==
 
* DWIConvert    <small>(cli, built-in)</small>
 
== Markus Van Tol ==
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
== Markus van Tol ==
 
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
== Martin Styner ==
 
* [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
== Mason Winsauer ==
 
* [[Documentation/4.4/Extensions/CMFreg|Apply Matrix]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelAddition|Label Addition]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelExtraction|Label Extraction]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
== Matt Lougheed ==
 
* [[Documentation/4.4/Modules/ResectionVolume|Resection Volume]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ResectionPlanner|Resection Planner]] extension)</small>
 
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Model]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small>
 
== Mattea Welch ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
== Matthew Holden ==
 
* [[Documentation/4.4/Extensions/SlicerIGT|Breach Warning]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Fiducial Registration Wizard]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Metafile Importer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Extensions/PerkTutor|Python Metrics Calculator]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequence Browser]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequences]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
== Matthew S. Holden ==
 
* [[Documentation/4.4/Modules/PerkEvaluator|Perk Evaluator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Modules/TransformRecorder|Transform Recorder]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Modules/WorkflowSegmentation|Workflow Segmentation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
== Matthew Woehlke ==
 
* [[Documentation/4.4/Modules/ExtensionWizard|Extension Wizard]]    <small>(scripted, built-in)</small>
 
== Michael Jeulin-Lagarrigue ==
 
* [[Documentation/4.4/Modules/Reformat|Reformat]]    <small>(loadable, built-in)</small>
 
== Minjeong Kim ==
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Testing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Training]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
 
== Nabgha Fahrat ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
== Neuro Image Resarch ==
 
* [[Documentation/4.4/Extensions/CMFreg|Apply Matrix]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelAddition|Label Addition]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelExtraction|Label Extraction]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
== Nicholas Herlambang ==
 
* JRC2013Vis
 
== Nick Tustison ==
 
* [[Documentation/4.4/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]]    <small>(cli, built-in)</small>
 
== Nicole Aucoin ==
 
* [[Documentation/4.4/Modules/ACPCTransform|ACPCTransform]]    <small>(cli, built-in)</small>
 
* Add Many Markups Fiducial Test
 
* [[Documentation/4.4/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/CastScalarVolume|Cast Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Colors|Colors]]    <small>(loadable, built-in)</small>
 
* Colors Scalar Bar Self Test
 
 
* [[Documentation/4.4/Modules/Data|Data]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Data|Data]]    <small>(loadable, built-in)</small>
* Fiducial Layout Switch Bug1914
+
* [[Documentation/4.4/Modules/DataProbe|Data Probe]]    <small>(scripted, built-in)</small>
* [[Documentation/4.4/Modules/GrayscaleModelMaker|Grayscale Model Maker]]    <small>(cli, built-in)</small>
+
* [[Documentation/4.4/Modules/DataStore|Data Store]]    <small>(loadable, built-in)</small>
* [[Documentation/4.4/Modules/Markups|Markups]]    <small>(loadable, built-in)</small>
 
* Markups In Compare Viewers Self Test
 
* Markups In Views Self Test
 
* [[Documentation/4.4/Modules/MaskScalarVolume|Mask Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MergeModels|Merge Models]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ModelMaker|Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Models|Models]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/ModelToLabelMap|Model To Label Map]]    <small>(cli, built-in)</small>
 
* Neurosurgical Planning Tutorial Markups Self Test
 
* [[Documentation/4.4/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/4.4/Extensions/Reporting|Reporting]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 
* [[Documentation/4.4/Modules/SceneViews|Scene Views]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
* [[Documentation/4.4/Modules/ThresholdScalarVolume|Threshold Scalar Volume]]    <small>(cli, built-in)</small>
 
* Volume Rendering Scene Close    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/Volumes|Volumes]]    <small>(loadable, built-in)</small>
 
== Nigel Goh ==
 
* [[Documentation/4.4/Modules/ThingiverseBrowser|Thingiverse Browser]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ThingiverseBrowser|Thingiverse Browser]] extension)</small>
 
== Nikos Chrisochoides ==
 
* [[Documentation/4.4/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Modules/MeshCompression|Mesh Compression]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small>
 
== Olivier Clatz ==
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small>
 
== p ==
 
* Dicom Rt Import Plugin
 
== Paolo Zaffino ==
 
* [[Documentation/4.4/Extensions/SlicerRT|Plastimatch Py]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== Pat Marion ==
 
* [[Documentation/4.4/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small>
 
== Paul Mercea ==
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
== Pengdong Xiao ==
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small>
 
== Peter Black ==
 
* [[Documentation/4.4/Modules/ChangeTracker|Change Tracker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
== Peter Karasev ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
== Peter Savadjiev ==
 
* [[Documentation/4.4/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/FinslerTractography|Finsler Tractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
== Pierre Seroul ==
 
* [[Documentation/4.4/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli, built-in)</small>
 
== Pietro Nardelli ==
 
* [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation]] extension)</small>
 
== Please direct questions or suggestions to http://groups.google.com/group/plastimatch ==
 
* [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer bspline]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer landwarp]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== Polina Goll ==
 
* EMSegment Command Line    <small>(cli, built-in)</small>
 
== Qing Pan ==
 
* [[Documentation/4.4/Modules/GyroGuide|Gyro Guide]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]] extension)</small>
 
== r ==
 
* Dicom Rt Import Plugin
 
== R ==
 
* Dicom Rt Import Plugin
 
== Raul San Jose ==
 
* [[Documentation/4.4/Modules/DiffusionTensorScalarMeasurements|Diffusion Tensor Scalar Measurements]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIToDTIEstimation|DWITo DTIEstimation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]]    <small>(cli, built-in)</small>
 
== Reinhard Beichel ==
 
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
== Rob MacLeod ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Boolean REMOVEFilter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Connected Threshold Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Isolated Connected Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
* [[Documentation/4.4/Modules/LASegmentationWorkflow|LASegmentation Workflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/ScarVisualization|Scar Visualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
== Ron Kikinis ==
 
* [[Documentation/4.4/Modules/ACPCTransform|ACPCTransform]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/CastScalarVolume|Cast Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ChangeTracker|Change Tracker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
* [[Documentation/4.4/Modules/CropVolume|Crop Volume]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MaskScalarVolume|Mask Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MergeModels|Merge Models]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ModelMaker|Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/4.4/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SurfaceToolbox|Surface Toolbox]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
* [[Documentation/4.4/Modules/ThresholdScalarVolume|Threshold Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
 
== Ross Whitaker ==
 
* [[Documentation/4.4/Modules/LabelMapSmoothing|Label Map Smoothing]]    <small>(cli, built-in)</small>
 
== Ruifeng Chen ==
 
* [[Documentation/4.4/Modules/GyroGuide|Gyro Guide]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]] extension)</small>
 
== S ==
 
* Dicom Rt Import Plugin
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
== Salma Bengali ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Boolean REMOVEFilter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Connected Threshold Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Isolated Connected Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/LASegmentationWorkflow|LASegmentation Workflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/ScarVisualization|Scar Visualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
== Sam Song ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
== Santiago Aja Fern ==
 
* [[Documentation/4.4/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIUnbiasedNonLocalMeansFilter|DWIUnbiased Non Local Means Filter]]    <small>(cli, built-in)</small>
 
== Sebastien Barr&eacute; ==
 
* [[Documentation/4.4/Modules/Cameras|Cameras]]    <small>(loadable, built-in)</small>
 
== Sebastien Barre ==
 
* EMSegment Command Line    <small>(cli, built-in)</small>
 
== Shigeyuki Naka ==
 
* [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
== Soichiro Tani ==
 
* [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
== Sonia Pujol ==
 
 
* [[Documentation/4.4/Modules/DiceComputation|Dice Computation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]] extension)</small>
 
* [[Documentation/4.4/Modules/DiceComputation|Dice Computation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]] extension)</small>
* DTIexport    <small>(cli, built-in)</small>
 
* DTIimport    <small>(cli, built-in)</small>
 
== Stefan Lienhard ==
 
* [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
== Stephen Aylward ==
 
* [[Documentation/4.4/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]]    <small>(cli, built-in)</small>
 
== Stephen R Aylward ==
 
* [[Documentation/4.4/Modules/ExpertAutomatedRegistration|Expert Automated Registration]]    <small>(cli, built-in)</small>
 
== Steve Pieper ==
 
* Atlas Tests
 
* [[Documentation/4.4/Extensions/IASEM|Binary Watershed Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [http://slicer.vmtk.org/ Centerline Computation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/4.4/Modules/CompareVolumes|Compare Volumes]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/DataProbe|Data Probe]]    <small>(scripted, built-in)</small>
 
 
* [[Documentation/4.4/Modules/DICOM|DICOM]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/DICOM|DICOM]]    <small>(scripted, built-in)</small>
* DICOMDiffusion Volume Plugin
+
* DICOM2Full Brain Tractography   <small>(scripted, built-in)</small>
* DICOMLongitudinal PETCTPlugin
+
* [[Documentation/4.4/Modules/DicomRtExport|Dicom Rt Export]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
* DICOMScalar Volume Plugin
+
* [[Documentation/4.4/Modules/DicomRtImport|Dicom Rt Import]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
* DICOMSlicer Data Bundle Plugin
+
* [[Documentation/4.4/Modules/DicomSroExport|Dicom Sro Export]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
* [[Documentation/4.4/Modules/Endoscopy|Endoscopy]]   <small>(scripted, built-in)</small>
+
* [[Documentation/4.4/Modules/DicomSroImport|Dicom Sro Import]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
* fiber visibility crash2438
 
* [[Documentation/4.4/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]]    <small>(scripted, built-in)</small>
 
* label Toggle Bug2049
 
* [[Documentation/4.4/Modules/LandmarkRegistration|Landmark Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
 
* Performance Tests
 
* [[Documentation/4.4/Extensions/Reporting|Reporting]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 
* RSNA2012Prostate Demo
 
* RSNAQuant Tutorial
 
* RSNAVis Tutorial
 
* [[Documentation/4.4/Modules/SampleData|Sample Data]]    <small>(scripted, built-in)</small>
 
* scene Import2428
 
* Self Tests
 
* [[Documentation/4.4/Modules/SimpleFilters|Simple Filters]]    <small>(scripted, built-in)</small>
 
* slicer Close Crash Bug2590
 
* Slicer MRBTest
 
* [[Documentation/4.4/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small>
 
* Threshold Threading Test
 
* [[Documentation/4.4/Modules/VectorToScalarVolume|Vector To Scalar Volume]]    <small>(scripted, built-in)</small>
 
* [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/4.4/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Volumes|Volumes]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Extensions/XNATSlicer|Xnat Slicer]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] extension)</small>
 
== Sunil Kumar ==
 
* [[Documentation/4.4/Extensions/XNATSlicer|Xnat Slicer]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] extension)</small>
 
== Sylvain Bouix ==
 
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
== Sylvain Gouttard ==
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
== t ==
 
* Dicom Rt Import Plugin
 
== Tamas Ungi ==
 
* [[Documentation/4.4/Extensions/SlicerIGT|Breach Warning]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* Breach Warning Self Test
 
* [[Documentation/4.4/Modules/CollectFiducials|Collect Fiducials]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Create Models]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Fiducial Registration Wizard]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Fiducials To Model Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/OpenIGTLinkRemote|Open IGTLink Remote]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/PerkEvaluator|Perk Evaluator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Pivot Calibration]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/PlusRemote|Plus Remote]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/PerkTutor|Python Metrics Calculator]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Extensions/Scoliosis|Scoliosis Monitoring]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
* [[Documentation/4.4/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Transform Fusion]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/TransformRecorder|Transform Recorder]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Ultrasound Snapshots]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/VolumeResliceDriver|Volume Reslice Driver]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* Watchdog Self Test
 
* [[Documentation/4.4/Modules/WorkflowSegmentation|Workflow Segmentation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
== the University of North Carolina at Chapel Hill ==
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small>
 
== Tina Kapur ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
== Tobias Penzkofer ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
== Tohru Tani ==
 
* [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
== UNC Medical School ==
 
* [[Documentation/4.4/Extensions/CMFreg|Apply Matrix]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelAddition|Label Addition]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelExtraction|Label Extraction]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
== UofM School Of Dentistry ==
 
* [[Documentation/4.4/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
== UofM School of Dentistry ==
 
* [[Documentation/4.4/Extensions/CMFreg|Apply Matrix]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelAddition|Label Addition]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelExtraction|Label Extraction]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
== Vince Magnotta ==
 
* DWIConvert    <small>(cli, built-in)</small>
 
== Vincent A. Magnotta ==
 
* BRAINSLabel Stats    <small>(cli, built-in)</small>
 
== Vincent Magnotta ==
 
* [[Documentation/4.4/Modules/BRAINSResample|BRAINSResample]]    <small>(cli, built-in)</small>
 
== Vinicius Boen ==
 
* [[Documentation/4.4/Extensions/CMFreg|Apply Matrix]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelAddition|Label Addition]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelExtraction|Label Extraction]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Extensions/CMFreg|Surface Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
== Vivek Narayan ==
 
* [[Documentation/4.4/Modules/HeterogeneityCAD|Heterogeneity CAD]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small>
 
* [[Documentation/4.4/Modules/SegmentCAD|Segment CAD]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small>
 
== Wendy Plesniak ==
 
* [[Documentation/4.4/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/4.4/Modules/SceneViews|Scene Views]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
* [[Documentation/4.4/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Welcome|Welcome]]    <small>(loadable, built-in)</small>
 
== Xiaodong Tao ==
 
* DWIConvert    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ModelToLabelMap|Model To Label Map]]    <small>(cli, built-in)</small>
 
== Xiaofeng Liu ==
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Testing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Training]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
 
== Xiaojun Chen ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
== y Wells ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
== Yanling Liu ==
 
* [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
 
== Yi Gao ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
* [[Documentation/4.4/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
== Yinglin Lee ==
 
* Test Grid Transform Registration    <small>(cli, built-in)</small>
 
== Yingxuan Zhu ==
 
* [[Documentation/4.4/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small>
 
== Yinpeng Li ==
 
* [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
== Yixun Liu ==
 
* [[Documentation/4.4/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Modules/MeshCompression|Mesh Compression]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small>
 
== Yogesh Rathi ==
 
* [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
== Yong Zhang ==
 
* [[Documentation/4.4/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 
== Yumin Yuan ==
 
* EMSegment Command Line    <small>(cli, built-in)</small>
 
== Yundi Shi ==
 
* [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
= Modules by type =
 
3 types:
 
* [[#cli|cli]]
 
* [[#loadable|loadable]]
 
* [[#scripted|scripted]]
 
== cli ==
 
* [http://www.nitrc.org/projects/abc ABC]    <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small>
 
* [[Documentation/4.4/Modules/ACPCTransform|ACPCTransform]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/AddScalarVolumes|Add Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation]] extension)</small>
 
* [[Documentation/4.4/Extensions/CMFreg|Apply Matrix]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Bin Shrink]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Modules/BRAINSDemonWarp|BRAINSDemon Warp]]    <small>(cli, built-in)</small>
 
* BRAINSDWICleanup    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/BRAINSFit|BRAINSFit]]    <small>(cli, built-in)</small>
 
* BRAINSLabel Stats    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/BRAINSResample|BRAINSResample]]    <small>(cli, built-in)</small>
 
* BRAINSResize    <small>(cli, built-in)</small>
 
* BRAINSROIAuto    <small>(cli, built-in)</small>
 
* BRAINSStrip Rotation    <small>(cli, built-in)</small>
 
* BRAINSTransform Convert    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/BSplineToDeformationField|BSpline To Deformation Field]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/CastScalarVolume|Cast Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/CheckerBoardFilter|Checker Board Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/CleaverExtension|Cleaver CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]] extension)</small>
 
* CLIROITest    <small>(cli, built-in)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Boolean REMOVEFilter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Connected Threshold Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Isolated Connected Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* [[Documentation/4.4/Modules/CreateDICOMSeries|Create DICOMSeries]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
 
* [[Documentation/4.4/Modules/DiffusionTensorScalarMeasurements|Diffusion Tensor Scalar Measurements]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DiffusionTensorScalarMeasurements|Diffusion Tensor Scalar Measurements]]    <small>(cli, built-in)</small>
* Diffusion Tensor Test    <small>(cli, built-in)</small>
 
 
* [[Documentation/4.4/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Dilate Label]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Dilate Label]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
 +
* [[Documentation/4.4/Modules/DoseAccumulation|Dose Accumulation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 +
* [[Documentation/4.4/Modules/DoseComparison|Dose Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 +
* [[Documentation/4.4/Extensions/MarginCalculator|Dose Morphology]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
 +
* [[Documentation/4.4/Extensions/MarginCalculator|Dose Population Histogram]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
 +
* [[Documentation/4.4/Modules/DoseVolumeHistogram|Dose Volume Histogram]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 +
* [[Documentation/4.4/Modules/dPetBrainQuantification|d Pet Brain Quantification]]    <small>(scripted, bundled in [http://gti-fing.github.io/SlicerPetSpectAnalysis Pet Spect Analysis] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
* DTIexport    <small>(cli, built-in)</small>
 
* DTIimport    <small>(cli, built-in)</small>
 
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 +
* [[Documentation/4.4/Extensions/SlicerRT|Dvh Comparison]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* DWIConvert    <small>(cli, built-in)</small>
 
* DWIConvert    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIToDTIEstimation|DWITo DTIEstimation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIToDTIEstimation|DWITo DTIEstimation]]    <small>(cli, built-in)</small>
* [[Documentation/4.4/Modules/DWIUnbiasedNonLocalMeansFilter|DWIUnbiased Non Local Means Filter]]    <small>(cli, built-in)</small>
+
* [[Documentation/4.4/Extensions/EasyClip|Easy Clip]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/EasyClip|Easy Clip]] extension)</small>
 +
* [[Documentation/4.4/Modules/EMSegment|EMSegment]]    <small>(loadable, built-in)</small>
 
* EMSegment Command Line    <small>(cli, built-in)</small>
 
* EMSegment Command Line    <small>(cli, built-in)</small>
 +
* EMSegment Quick    <small>(loadable, built-in)</small>
 
* EMSegment Transform To New Format    <small>(cli, built-in)</small>
 
* EMSegment Transform To New Format    <small>(cli, built-in)</small>
 +
* [[Documentation/4.4/Modules/Endoscopy|Endoscopy]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Label]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Label]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
* [[Documentation/4.4/Modules/ExecutionModelTour|Execution Model Tour]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ExpertAutomatedRegistration|Expert Automated Registration]]    <small>(cli, built-in)</small>
 
 
* [[Documentation/4.4/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli, built-in)</small>
 +
* [[Documentation/4.4/Modules/FastGrowCut|Fast Grow Cut]]    <small>(loadable, bundled in [https://www.slicer.org/wiki/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small>
 +
* [http://wiki.slicer.org/wiki/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter]    <small>(loadable, bundled in [http://wiki.slicer.org/wiki/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
* Fiber Bundle Label Select    <small>(cli, built-in)</small>
 
* Fiber Bundle Label Select    <small>(cli, built-in)</small>
 +
* [[Documentation/4.4/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Fiber Compare]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Fiber Compare]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Modules/FiducialRegistration|Fiducial Registration]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/FiducialRegistration|Fiducial Registration]]    <small>(cli, built-in)</small>
 +
* [[Documentation/4.4/Extensions/SlicerIGT|Fiducial Registration Wizard]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 +
* [[Documentation/4.4/Extensions/SlicerIGT|Fiducials To Model Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/FinslerTractography|Finsler Tractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/FinslerTractography|Finsler Tractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]]    <small>(cli, built-in)</small>
 +
* [http://www.slicer.org/wiki/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 +
* [http://www.slicer.org/wiki/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo]    <small>(loadable, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
* [[Documentation/4.4/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]]    <small>(cli, built-in)</small>
Line 2,209: Line 618:
 
* [[Documentation/4.4/Modules/GrayscaleModelMaker|Grayscale Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleModelMaker|Grayscale Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 +
* [[Documentation/4.4/Modules/GyroGuide|Gyro Guide]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]] extension)</small>
 +
* [[Documentation/4.4/Modules/HeterogeneityCAD|Heterogeneity CAD]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small>
 
* [[Documentation/4.4/Modules/HistogramMatching|Histogram Matching]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/HistogramMatching|Histogram Matching]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/IASEM|IASEMImport]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|IASEMImport]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
Line 2,214: Line 625:
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Testing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Testing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Training]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Training]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
 +
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/4.4/Modules/ImageLabelCombine|Image Label Combine]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ImageLabelCombine|Image Label Combine]]    <small>(cli, built-in)</small>
* [[Documentation/4.4/Extensions/ImageMaker|Image Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ImageMaker|Image Maker]] extension)</small>
 
 
* [[Documentation/4.4/Modules/IntensityDifferenceMetric|Intensity Difference Metric]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
* [[Documentation/4.4/Modules/IntensityDifferenceMetric|Intensity Difference Metric]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small>
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small>
 +
* [[Documentation/4.4/Modules/Isodose|Isodose]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 +
* [http://wiki.slicer.org/wiki/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter KUtil]    <small>(scripted, bundled in [http://wiki.slicer.org/wiki/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
* [[Documentation/4.4/Modules/LabelAddition|Label Addition]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelAddition|Label Addition]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelExtraction|Label Extraction]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelExtraction|Label Extraction]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelMapSmoothing|Label Map Smoothing]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/LabelMapSmoothing|Label Map Smoothing]]    <small>(cli, built-in)</small>
 +
* [[Documentation/4.4/Extensions/IASEM|Label Object Statistics]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 +
* [[Documentation/4.4/Extensions/Reporting|Label To DICOMSEGConverter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 +
* [[Documentation/4.4/Modules/LandmarkRegistration|Landmark Registration]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
* [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 +
* [[Documentation/4.4/Modules/LASegmentationWorkflow|LASegmentation Workflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 +
* [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 +
* [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 +
* [[Documentation/4.4/Extensions/MarginCalculator|Margin Calculator]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
 +
* [[Documentation/4.4/Modules/Markups|Markups]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/MaskScalarVolume|Mask Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MaskScalarVolume|Mask Scalar Volume]]    <small>(cli, built-in)</small>
* [[Documentation/4.4/Modules/MatlabCommander|Matlab Commander]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
 
* [[Documentation/4.4/Modules/MedianImageFilter|Median Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MedianImageFilter|Median Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MergeModels|Merge Models]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MergeModels|Merge Models]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Merge Stat With Fiber]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Merge Stat With Fiber]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Modules/MeshCompression|Mesh Compression]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Modules/MeshCompression|Mesh Compression]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 +
* [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/MeshStatistics Mesh Statistics]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/MeshStatistics Mesh Statistics Extension] extension)</small>
 
* [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]] extension)</small>
 
* [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]] extension)</small>
 +
* [[Documentation/4.4/Extensions/MultidimData|Metafile Importer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Modules/ModelMaker|Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ModelMaker|Model Maker]]    <small>(cli, built-in)</small>
 +
* [[Documentation/4.4/Extensions/SlicerIGT|Model Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 +
* [[Documentation/4.4/Modules/Models|Models]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/ModelToLabelMap|Model To Label Map]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ModelToLabelMap|Model To Label Map]]    <small>(cli, built-in)</small>
 +
* [[Documentation/4.4/Extensions/ModelToModelDistance|Model To Model Distance]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ModelToModelDistance|Model To Model Distance]] extension)</small>
 +
* [[Documentation/4.4/Extensions/MarginCalculator|Motion Simulator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
 +
* [[Documentation/4.4/Extensions/MarginCalculator|Motion Simulator Double Array]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
 
* [[Documentation/4.4/Modules/MultiplyScalarVolumes|Multiply Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiplyScalarVolumes|Multiply Scalar Volumes]]    <small>(cli, built-in)</small>
 +
* [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
 +
* [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]]    <small>(cli, built-in)</small>
 +
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
* [[Documentation/4.4/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 +
* [[Documentation/4.4/Modules/OpenIGTLinkIF|Open IGTLink IF]]    <small>(loadable, built-in)</small>
 +
* [[Documentation/4.4/Modules/OpenIGTLinkRemote|Open IGTLink Remote]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/OrientScalarVolume|Orient Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/OrientScalarVolume|Orient Scalar Volume]]    <small>(cli, built-in)</small>
* [[Documentation/4.4/Modules/OtsuThresholdImageFilter|Otsu Threshold Image Filter]]    <small>(cli, built-in)</small>
+
* [[Documentation/4.4/Modules/PathExplorer|Path Explorer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small>
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small>
 +
* [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small>
 
* Perform Metric Test    <small>(cli, built-in)</small>
 
* Perform Metric Test    <small>(cli, built-in)</small>
 +
* [[Documentation/4.4/Modules/PerkEvaluator|Perk Evaluator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 +
* [[Documentation/4.4/Extensions/PET-IndiC|PETIndi C]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 +
* [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]] extension)</small>
 +
* [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/PickAndPaint Pick And Paint]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/PickAndPaint Pick And Paint Extension] extension)</small>
 +
* [[Documentation/4.4/Extensions/SlicerIGT|Pivot Calibration]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small>
 
* [[Documentation/4.4/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small>
 +
* [[Documentation/4.4/Extensions/SlicerRT|Planar Image]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer bspline]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer bspline]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer landwarp]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer landwarp]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
* [[Documentation/4.4/Modules/ProbeVolumeWithModel|Probe Volume With Model]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ResampleDTIVolume|Resample DTIVolume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ResampleScalarVectorDWIVolume|Resample Scalar Vector DWIVolume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ResampleScalarVolume|Resample Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
* [[Documentation/4.4/Modules/SimpleRegionGrowingSegmentation|Simple Region Growing Segmentation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SobolevSegmenter|Sobolev Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Spacing Aware Curvature Diffusion]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Modules/SubtractScalarVolumes|Subtract Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
* [[Documentation/4.4/Modules/SwissSkullStripper|Swiss Skull Stripper]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]] extension)</small>
 
* Test Grid Transform Registration    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ThresholdScalarVolume|Threshold Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* VBRAINSDemon Warp    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/VotingBinaryHoleFillingImageFilter|Voting Binary Hole Filling Image Filter]]    <small>(cli, built-in)</small>
 
== loadable ==
 
* [[Documentation/4.4/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Beams]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Breach Warning]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/Cameras|Cameras]]    <small>(loadable, built-in)</small>
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
* [[Documentation/4.4/Modules/CollectFiducials|Collect Fiducials]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/Colors|Colors]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/ContourComparison|Contour Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ContourMorphology|Contour Morphology]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Contours|Contours]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Create Models]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/CropVolume|Crop Volume]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Data|Data]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/DataStore|Data Store]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/DiceComputation|Dice Computation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomRtExport|Dicom Rt Export]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomRtImport|Dicom Rt Import]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomSroImport|Dicom Sro Import]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseAccumulation|Dose Accumulation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseComparison|Dose Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseVolumeHistogram|Dose Volume Histogram]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* Double Arrays    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/EMSegment|EMSegment]]    <small>(loadable, built-in)</small>
 
* EMSegment Quick    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/FastGrowCut|Fast Grow Cut]]    <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small>
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Fiducial Registration Wizard]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo]    <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
* [[Documentation/4.4/Modules/Isodose|Isodose]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/4.4/Modules/Markups|Markups]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MatlabModuleGenerator|Matlab Module Generator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Metafile Importer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Modules/Models|Models]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/OpenIGTLinkIF|Open IGTLink IF]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/OpenIGTLinkRemote|Open IGTLink Remote]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/PathExplorer|Path Explorer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/PerkEvaluator|Perk Evaluator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Pivot Calibration]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Planar Image]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
 
* [[Documentation/4.4/Extensions/SlicerRT|Plastimatch Py]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Plastimatch Py]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
* [[Documentation/4.4/Modules/Reformat|Reformat]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Extensions/Reporting|Reporting]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 
* [[Documentation/4.4/Modules/SceneViews|Scene Views]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequence Browser]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequences]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Modules/SubjectHierarchy|Subject Hierarchy]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/TrackerStabilizer|Tracker Stabilizer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small>
 
* [[Documentation/4.4/Modules/TractographyDisplay|Tractography Display]]    <small>(loadable, built-in)</small>
 
* Tractography Interactive Seeding    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Transform Fusion]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/TransformRecorder|Transform Recorder]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Ultrasound Snapshots]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/Units|Units]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Vff File Reader]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/VolumeResliceDriver|Volume Reslice Driver]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/Volumes|Volumes]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Welcome|Welcome]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/WorkflowSegmentation|Workflow Segmentation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
== scripted ==
 
* [[Documentation/4.4/Extensions/SlicerRT|Batch Contour Conversion]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Binary Watershed Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures]    <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] extension)</small>
 
* [http://slicer.vmtk.org/ Centerline Computation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/4.4/Modules/ChangeTracker|Change Tracker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
* Charting    <small>(scripted, built-in)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/CompareVolumes|Compare Volumes]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
* [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]] extension)</small>
 
* [[Documentation/4.4/Modules/DataProbe|Data Probe]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/DICOM|DICOM]]    <small>(scripted, built-in)</small>
 
* DICOM2Full Brain Tractography    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/DicomSroExport|Dicom Sro Export]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Double Threshold Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Dvh Comparison]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Endoscopy|Endoscopy]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/ExtensionWizard|Extension Wizard]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Fiducials To Model Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
* [[Documentation/4.4/Modules/GyroGuide|Gyro Guide]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]] extension)</small>
 
* [[Documentation/4.4/Modules/HeterogeneityCAD|Heterogeneity CAD]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small>
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter KUtil]    <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Label Object Statistics]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/Reporting|Label To DICOMSEGConverter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 
* [[Documentation/4.4/Modules/LandmarkRegistration|Landmark Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LASegmentationWorkflow|LASegmentation Workflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
* [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small>
 
 
* [[Documentation/4.4/Extensions/SlicerRT|Plm Register]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Plm Register]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/PlusRemote|Plus Remote]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/PlusRemote|Plus Remote]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/PortPlacement|Port Placement]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PortPlacement|Port Placement]] extension)</small>
 
* [[Documentation/4.4/Modules/PortPlacement|Port Placement]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PortPlacement|Port Placement]] extension)</small>
* [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] extension)</small>
+
* [[Documentation/4.4/Modules/ProbeVolumeWithModel|Probe Volume With Model]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/PerkTutor|Python Metrics Calculator]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Extensions/PerkTutor|Python Metrics Calculator]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
* [[Documentation/4.4/Modules/ResectionVolume|Resection Volume]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ResectionPlanner|Resection Planner]] extension)</small>
+
* [[Documentation/4.4/Extensions/Q3DC|Q3DC]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Q3DC|Q3DC]] extension)</small>
* [[Documentation/4.4/Modules/SampleData|Sample Data]]    <small>(scripted, built-in)</small>
+
* [[Documentation/4.4/Modules/QuantitativeIndicesCLI|Quantitative Indices CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
* [[Documentation/4.4/Modules/ScarVisualization|Scar Visualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
+
* [[Documentation/4.4/Extensions/PET-IndiC|Quantitative Indices Tool]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
* Scene Performance    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Extensions/Scoliosis|Scoliosis Monitoring]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
* [[Documentation/4.4/Modules/SegmentCAD|Segment CAD]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small>
 
* [[Documentation/4.4/Modules/SimpleFilters|Simple Filters]]    <small>(scripted, built-in)</small>
 
* Slice Link Logic    <small>(scripted, built-in)</small>
 
* Slicer4Minute    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small>
 
* [[Documentation/4.4/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
* [[Documentation/4.4/Extensions/CMFreg|Surface Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/SurfaceToolbox|Surface Toolbox]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] extension)</small>
 
* [[Documentation/4.4/Modules/ThingiverseBrowser|Thingiverse Browser]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ThingiverseBrowser|Thingiverse Browser]] extension)</small>
 
* [[Documentation/4.4/Modules/VectorToScalarVolume|Vector To Scalar Volume]]    <small>(scripted, built-in)</small>
 
* [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Model]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small>
 
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Roi]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small>
 
* Volume Rendering Scene Close    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small>
 
* [[Documentation/4.4/Extensions/XNATSlicer|Xnat Slicer]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] extension)</small>
 
= Modules by extension =
 
55 extensions:
 
* [[#ABC|ABC]]
 
* [[#AirwaySegmentation|Airway Segmentation]]
 
* [[#builtin|builtin]]
 
* [[#Cardiac_MRI_Toolkit|Cardiac MRI Toolkit]]
 
* [[#CardiacAgastonMeasures|Cardiac Agaston Measures]]
 
* [[#CarreraSlice|Carrera Slice]]
 
* [[#CBC_3D_I2MConversion|CBC 3D I2MConversion]]
 
* [[#ChangeTracker|Change Tracker]]
 
* [[#CleaverExtension|Cleaver Extension]]
 
* [[#CMFreg|CMFreg]]
 
* [[#CornerAnnotation|Corner Annotation]]
 
* [[#CurveMaker|Curve Maker]]
 
* [[#DiceComputation|Dice Computation]]
 
* [[#DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]
 
* [[#ErodeDilateLabel|Erode Dilate Label]]
 
* [[#FastGrowCutEffect|Fast Grow Cut Effect]]
 
* [[#FinslerTractography|Finsler Tractography]]
 
* [[#GelDosimetryAnalysis|Gel Dosimetry Analysis]]
 
* [[#GyroGuide|Gyro Guide]]
 
* [[#IASEM|IASEM]]
 
* [[#iGyne|i Gyne]]
 
* [[#ImageMaker|Image Maker]]
 
* [[#IntensitySegmenter|Intensity Segmenter]]
 
* [[#LAScarSegmenter|LAScar Segmenter]]
 
* [[#LongitudinalPETCT|Longitudinal PETCT]]
 
* [[#MABMIS|MABMIS]]
 
* [[#MatlabBridge|Matlab Bridge]]
 
* [[#MeshToLabelMap|Mesh To Label Map]]
 
* [[#MultidimData|Multidim Data]]
 
* [[#NeedleFinder|Needle Finder]]
 
* [[#OpenCAD|Open CAD]]
 
* [[#PBNRR|PBNRR]]
 
* [[#PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]
 
* [[#PerkTutor|Perk Tutor]]
 
* [[#PETDICOMExtension|PETDICOMExtension]]
 
* [[#PkModeling|Pk Modeling]]
 
* [[#PortPlacement|Port Placement]]
 
* [[#PyDevRemoteDebug|Py Dev Remote Debug]]
 
* [[#Reporting|Reporting]]
 
* [[#ResectionPlanner|Resection Planner]]
 
* [[#Scoliosis|Scoliosis]]
 
* [[#SegmentationAidedRegistration|Segmentation Aided Registration]]
 
* [[#SlicerExtension-VMTK|VMTK]]
 
* [[#SlicerIGT|Slicer IGT]]
 
* [[#SlicerRT|Slicer RT]]
 
* [[#SlicerToKiwiExporter|Slicer To Kiwi Exporter]]
 
* [[#SobolevSegmenter|Sobolev Segmenter]]
 
* [[#SwissSkullStripper|Swiss Skull Stripper]]
 
* [[#TCIABrowser|TCIABrowser]]
 
* [[#ThingiverseBrowser|Thingiverse Browser]]
 
* [[#TrackerStabilizer|Tracker Stabilizer]]
 
* [[#UKFTractography|UKFTractography]]
 
* [[#VolumeClip|Volume Clip]]
 
* [[#WindowLevelEffect|Window Level Effect]]
 
* [[#XNATSlicer|XNATSlicer]]
 
== ABC ==
 
* [http://www.nitrc.org/projects/abc ABC]    <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small>
 
== AirwaySegmentation ==
 
* [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation]] extension)</small>
 
== builtin ==
 
* [[Documentation/4.4/Modules/ACPCTransform|ACPCTransform]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/AddScalarVolumes|Add Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/BRAINSDemonWarp|BRAINSDemon Warp]]    <small>(cli, built-in)</small>
 
* BRAINSDWICleanup    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/BRAINSFit|BRAINSFit]]    <small>(cli, built-in)</small>
 
* BRAINSLabel Stats    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/BRAINSResample|BRAINSResample]]    <small>(cli, built-in)</small>
 
* BRAINSResize    <small>(cli, built-in)</small>
 
* BRAINSROIAuto    <small>(cli, built-in)</small>
 
* BRAINSStrip Rotation    <small>(cli, built-in)</small>
 
* BRAINSTransform Convert    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/BSplineToDeformationField|BSpline To Deformation Field]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Cameras|Cameras]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/CastScalarVolume|Cast Scalar Volume]]    <small>(cli, built-in)</small>
 
* Charting    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/CheckerBoardFilter|Checker Board Filter]]    <small>(cli, built-in)</small>
 
* CLIROITest    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Colors|Colors]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/CreateDICOMSeries|Create DICOMSeries]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/CropVolume|Crop Volume]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Data|Data]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/DataProbe|Data Probe]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/DataStore|Data Store]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/DICOM|DICOM]]    <small>(scripted, built-in)</small>
 
* DICOM2Full Brain Tractography    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/DiffusionTensorScalarMeasurements|Diffusion Tensor Scalar Measurements]]    <small>(cli, built-in)</small>
 
* Diffusion Tensor Test    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]]    <small>(cli, built-in)</small>
 
* Double Arrays    <small>(loadable, built-in)</small>
 
* DTIexport    <small>(cli, built-in)</small>
 
* DTIimport    <small>(cli, built-in)</small>
 
* DWIConvert    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIToDTIEstimation|DWITo DTIEstimation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIUnbiasedNonLocalMeansFilter|DWIUnbiased Non Local Means Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/EMSegment|EMSegment]]    <small>(loadable, built-in)</small>
 
* EMSegment Command Line    <small>(cli, built-in)</small>
 
* EMSegment Quick    <small>(loadable, built-in)</small>
 
* EMSegment Transform To New Format    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Endoscopy|Endoscopy]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/ExecutionModelTour|Execution Model Tour]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ExpertAutomatedRegistration|Expert Automated Registration]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ExtensionWizard|Extension Wizard]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli, built-in)</small>
 
* Fiber Bundle Label Select    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/FiducialRegistration|Fiducial Registration]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleGrindPeakImageFilter|Grayscale Grind Peak Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleModelMaker|Grayscale Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/HistogramMatching|Histogram Matching]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ImageLabelCombine|Image Label Combine]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/LabelMapSmoothing|Label Map Smoothing]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Markups|Markups]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MaskScalarVolume|Mask Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MedianImageFilter|Median Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MergeModels|Merge Models]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ModelMaker|Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Models|Models]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/ModelToLabelMap|Model To Label Map]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiplyScalarVolumes|Multiply Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/OpenIGTLinkIF|Open IGTLink IF]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/OrientScalarVolume|Orient Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/OtsuThresholdImageFilter|Otsu Threshold Image Filter]]    <small>(cli, built-in)</small>
 
* Perform Metric Test    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ProbeVolumeWithModel|Probe Volume With Model]]    <small>(cli, built-in)</small>
 
 
* [[Documentation/4.4/Modules/Reformat|Reformat]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Reformat|Reformat]]    <small>(loadable, built-in)</small>
 +
* [[Documentation/4.4/Extensions/Reporting|Reporting]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 +
* [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/ResampleDTIlogEuclidean Resample DTIlog Euclidean]    <small>(cli, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/ResampleDTIlogEuclidean Resample DTIlog Euclidean] extension)</small>
 
* [[Documentation/4.4/Modules/ResampleDTIVolume|Resample DTIVolume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ResampleDTIVolume|Resample DTIVolume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ResampleScalarVectorDWIVolume|Resample Scalar Vector DWIVolume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ResampleScalarVectorDWIVolume|Resample Scalar Vector DWIVolume]]    <small>(cli, built-in)</small>
* [[Documentation/4.4/Modules/ResampleScalarVolume|Resample Scalar Volume]]    <small>(cli, built-in)</small>
+
* [[Documentation/4.4/Modules/ResectionVolume|Resection Volume]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ResectionPlanner|Resection Planner]] extension)</small>
 
* [[Documentation/4.4/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SampleData|Sample Data]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/SampleData|Sample Data]]    <small>(scripted, built-in)</small>
* Scene Performance   <small>(scripted, built-in)</small>
+
* [[Documentation/4.4/Modules/ScarVisualization|Scar Visualization]]   <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/SceneViews|Scene Views]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/SceneViews|Scene Views]]    <small>(loadable, built-in)</small>
 +
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 +
* [[Documentation/4.4/Modules/SegmentCAD|Segment CAD]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small>
 +
* [[Documentation/4.4/Extensions/MultidimData|Sequence Browser]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 +
* [[Documentation/4.4/Extensions/MultidimData|Sequences]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Modules/SimpleFilters|Simple Filters]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/SimpleFilters|Simple Filters]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/SimpleRegionGrowingSegmentation|Simple Region Growing Segmentation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SimpleRegionGrowingSegmentation|Simple Region Growing Segmentation]]    <small>(cli, built-in)</small>
* Slice Link Logic   <small>(scripted, built-in)</small>
+
* [[Documentation/4.4/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]   <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small>
* Slicer4Minute   <small>(scripted, built-in)</small>
+
* [[Documentation/4.4/Modules/SobolevSegmenter|Sobolev Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]] extension)</small>
 +
* [[Documentation/4.4/Extensions/IASEM|Spacing Aware Curvature Diffusion]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 +
* [[Documentation/4.4/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]]   <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
* [[Documentation/4.4/Modules/SubjectHierarchy|Subject Hierarchy]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/SubjectHierarchy|Subject Hierarchy]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/SubtractScalarVolumes|Subtract Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SubtractScalarVolumes|Subtract Scalar Volumes]]    <small>(cli, built-in)</small>
 +
* [[Documentation/4.4/Modules/SurfaceRegistration|Surface Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/SurfaceToolbox|Surface Toolbox]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/SurfaceToolbox|Surface Toolbox]]    <small>(scripted, built-in)</small>
* Test Grid Transform Registration   <small>(cli, built-in)</small>
+
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]   <small>(cli, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 +
* [[Documentation/4.4/Modules/SwissSkullStripper|Swiss Skull Stripper]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]] extension)</small>
 +
* [[Documentation/4.4/Extensions/MarginCalculator|Synthetic RTDose]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
 +
* [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] extension)</small>
 +
* [[Documentation/4.4/Modules/ThingiverseBrowser|Thingiverse Browser]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ThingiverseBrowser|Thingiverse Browser]] extension)</small>
 
* [[Documentation/4.4/Modules/ThresholdScalarVolume|Threshold Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ThresholdScalarVolume|Threshold Scalar Volume]]    <small>(cli, built-in)</small>
 +
* [[Documentation/4.4/Modules/TrackerStabilizer|Tracker Stabilizer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small>
 
* [[Documentation/4.4/Modules/TractographyDisplay|Tractography Display]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/TractographyDisplay|Tractography Display]]    <small>(loadable, built-in)</small>
 
* Tractography Interactive Seeding    <small>(loadable, built-in)</small>
 
* Tractography Interactive Seeding    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]]    <small>(cli, built-in)</small>
 +
* [[Documentation/4.4/Extensions/SlicerIGT|Transform Fusion]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 +
* [[Documentation/4.4/Modules/TransformRecorder|Transform Recorder]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 +
* [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 +
* [[Documentation/4.4/Extensions/SlicerIGT|Ultrasound Snapshots]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/Units|Units]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Units|Units]]    <small>(loadable, built-in)</small>
 
* VBRAINSDemon Warp    <small>(cli, built-in)</small>
 
* VBRAINSDemon Warp    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/VectorToScalarVolume|Vector To Scalar Volume]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/VectorToScalarVolume|Vector To Scalar Volume]]    <small>(scripted, built-in)</small>
 +
* [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 +
* [[Documentation/4.4/Extensions/SlicerRT|Vff File Reader]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 +
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Model]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small>
 +
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Roi]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small>
 
* [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
* Volume Rendering Scene Close   <small>(scripted, built-in)</small>
+
* [[Documentation/4.4/Modules/VolumeResliceDriver|Volume Reslice Driver]]   <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/Volumes|Volumes]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Volumes|Volumes]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/VotingBinaryHoleFillingImageFilter|Voting Binary Hole Filling Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/VotingBinaryHoleFillingImageFilter|Voting Binary Hole Filling Image Filter]]    <small>(cli, built-in)</small>
 +
* [https://github.com/Tomnl/Slicer-Wasp Wasp]    <small>(scripted, bundled in [https://github.com/Tomnl/Slicer-Wasp Wasp] extension)</small>
 +
* [[Documentation/4.4/Extensions/SlicerIGT|Watchdog]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/Welcome|Welcome]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Welcome|Welcome]]    <small>(loadable, built-in)</small>
== Cardiac_MRI_Toolkit ==
+
* [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small>
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Boolean REMOVEFilter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Connected Threshold Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Isolated Connected Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/LASegmentationWorkflow|LASegmentation Workflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/ScarVisualization|Scar Visualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
== CardiacAgastonMeasures ==
 
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures]    <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] extension)</small>
 
== CarreraSlice ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter KUtil]    <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
== CBC_3D_I2MConversion ==
 
* [[Documentation/4.4/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Modules/MeshCompression|Mesh Compression]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
== ChangeTracker ==
 
* [[Documentation/4.4/Modules/ChangeTracker|Change Tracker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
* [[Documentation/4.4/Modules/IntensityDifferenceMetric|Intensity Difference Metric]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
== CleaverExtension ==
 
* [[Documentation/4.4/Extensions/CleaverExtension|Cleaver CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]] extension)</small>
 
== CMFreg ==
 
* [[Documentation/4.4/Extensions/CMFreg|Apply Matrix]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/CompareVolumes|Compare Volumes]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelAddition|Label Addition]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelExtraction|Label Extraction]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LandmarkRegistration|Landmark Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Extensions/CMFreg|Surface Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
== CornerAnnotation ==
 
* [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
== CurveMaker ==
 
* [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]] extension)</small>
 
== DiceComputation ==
 
* [[Documentation/4.4/Modules/DiceComputation|Dice Computation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]] extension)</small>
 
== DTIAtlasFiberAnalyzer ==
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Fiber Compare]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Merge Stat With Fiber]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
== ErodeDilateLabel ==
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Dilate Label]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Label]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
 
== FastGrowCutEffect ==
 
* [[Documentation/4.4/Modules/FastGrowCut|Fast Grow Cut]]    <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small>
 
== FinslerTractography ==
 
* [[Documentation/4.4/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/FinslerTractography|Finsler Tractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
== GelDosimetryAnalysis ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo]    <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
== GyroGuide ==
 
* [[Documentation/4.4/Modules/GyroGuide|Gyro Guide]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]] extension)</small>
 
== IASEM ==
 
* [[Documentation/4.4/Extensions/IASEM|Binary Watershed Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Bin Shrink]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Double Threshold Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|IASEMImport]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|IASEMImport Series]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Label Object Statistics]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Spacing Aware Curvature Diffusion]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
== iGyne ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
== ImageMaker ==
 
* [[Documentation/4.4/Extensions/ImageMaker|Image Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ImageMaker|Image Maker]] extension)</small>
 
== IntensitySegmenter ==
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small>
 
== LAScarSegmenter ==
 
* [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
== LongitudinalPETCT ==
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
== MABMIS ==
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Testing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Training]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
 
== MatlabBridge ==
 
* [[Documentation/4.4/Modules/MatlabCommander|Matlab Commander]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/4.4/Modules/MatlabModuleGenerator|Matlab Module Generator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
== MeshToLabelMap ==
 
* [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]] extension)</small>
 
== MultidimData ==
 
* [[Documentation/4.4/Extensions/MultidimData|Metafile Importer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequence Browser]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequences]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
== NeedleFinder ==
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
== OpenCAD ==
 
* [[Documentation/4.4/Modules/HeterogeneityCAD|Heterogeneity CAD]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small>
 
* [[Documentation/4.4/Modules/SegmentCAD|Segment CAD]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small>
 
== PBNRR ==
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small>
 
== PercutaneousApproachAnalysis ==
 
* [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small>
 
== PerkTutor ==
 
* [[Documentation/4.4/Modules/PerkEvaluator|Perk Evaluator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Extensions/PerkTutor|Python Metrics Calculator]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Modules/TransformRecorder|Transform Recorder]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
 
* [[Documentation/4.4/Modules/WorkflowSegmentation|Workflow Segmentation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Modules/WorkflowSegmentation|Workflow Segmentation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
== PETDICOMExtension ==
 
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
== PkModeling ==
 
* [[Documentation/4.4/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small>
 
== PortPlacement ==
 
* [[Documentation/4.4/Modules/PortPlacement|Port Placement]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PortPlacement|Port Placement]] extension)</small>
 
== PyDevRemoteDebug ==
 
* [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] extension)</small>
 
== Reporting ==
 
* [[Documentation/4.4/Extensions/Reporting|Label To DICOMSEGConverter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 
* [[Documentation/4.4/Extensions/Reporting|Reporting]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 
== ResectionPlanner ==
 
* [[Documentation/4.4/Modules/ResectionVolume|Resection Volume]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ResectionPlanner|Resection Planner]] extension)</small>
 
== Scoliosis ==
 
* [[Documentation/4.4/Extensions/Scoliosis|Scoliosis Monitoring]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
* [[Documentation/4.4/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
== SegmentationAidedRegistration ==
 
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
== SlicerExtension-VMTK ==
 
* [http://slicer.vmtk.org/ Centerline Computation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
== SlicerIGT ==
 
* [[Documentation/4.4/Extensions/SlicerIGT|Breach Warning]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/CollectFiducials|Collect Fiducials]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Create Models]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Fiducial Registration Wizard]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Fiducials To Model Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/OpenIGTLinkRemote|Open IGTLink Remote]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/PathExplorer|Path Explorer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Pivot Calibration]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/PlusRemote|Plus Remote]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Transform Fusion]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Ultrasound Snapshots]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/VolumeResliceDriver|Volume Reslice Driver]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
== SlicerRT ==
 
* [[Documentation/4.4/Extensions/SlicerRT|Batch Contour Conversion]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Beams]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ContourComparison|Contour Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ContourMorphology|Contour Morphology]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Contours|Contours]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomRtExport|Dicom Rt Export]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomRtImport|Dicom Rt Import]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomSroExport|Dicom Sro Export]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomSroImport|Dicom Sro Import]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseAccumulation|Dose Accumulation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseComparison|Dose Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseVolumeHistogram|Dose Volume Histogram]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Dvh Comparison]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Isodose|Isodose]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Planar Image]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer bspline]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer landwarp]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Plastimatch Py]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Plm Register]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Vff File Reader]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== SlicerToKiwiExporter ==
 
* [[Documentation/4.4/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small>
 
== SobolevSegmenter ==
 
* [[Documentation/4.4/Modules/SobolevSegmenter|Sobolev Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]] extension)</small>
 
== SwissSkullStripper ==
 
* [[Documentation/4.4/Modules/SwissSkullStripper|Swiss Skull Stripper]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]] extension)</small>
 
== TCIABrowser ==
 
* [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] extension)</small>
 
== ThingiverseBrowser ==
 
* [[Documentation/4.4/Modules/ThingiverseBrowser|Thingiverse Browser]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ThingiverseBrowser|Thingiverse Browser]] extension)</small>
 
== TrackerStabilizer ==
 
* [[Documentation/4.4/Modules/TrackerStabilizer|Tracker Stabilizer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small>
 
== UKFTractography ==
 
* [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
== VolumeClip ==
 
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Model]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small>
 
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Roi]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small>
 
== WindowLevelEffect ==
 
* [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small>
 
== XNATSlicer ==
 
* [[Documentation/4.4/Extensions/XNATSlicer|Xnat Slicer]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] extension)</small>
 
= Extensions by name =
 
54 extensions:
 
* [http://www.nitrc.org/projects/abc ABC]
 
* [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation]]
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit]
 
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures]
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
* [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]]
 
* [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]]
 
* [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]]
 
* [[Documentation/4.4/Extensions/CMFreg|CMFreg]]
 
* [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]]
 
* [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]]
 
* [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]]
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]]
 
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect]
 
* [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]
 
* [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]]
 
* [[Documentation/4.4/Extensions/IASEM|IASEM]]
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]
 
* [[Documentation/4.4/Extensions/ImageMaker|Image Maker]]
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]
 
* [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]]
 
* [[Documentation/4.4/Extensions/MABMIS|MABMIS]]
 
* [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]]
 
* [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]]
 
* [[Documentation/4.4/Extensions/MultidimData|Multidim Data]]
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]
 
* [[Documentation/4.4/Extensions/OpenCAD|Open CAD]]
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]
 
* [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]
 
* [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension]
 
* [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]]
 
* [[Documentation/4.4/Extensions/PortPlacement|Port Placement]]
 
* [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]]
 
* [[Documentation/4.4/Extensions/Reporting|Reporting]]
 
* [[Documentation/4.4/Extensions/ResectionPlanner|Resection Planner]]
 
* [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
* [http://slicer.vmtk.org/ VMTK]
 
* [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]]
 
* [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]]
 
* [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]
 
* [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]]
 
* [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]]
 
* [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]]
 
* [[Documentation/4.4/Extensions/ThingiverseBrowser|Thingiverse Browser]]
 
* [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]]
 
* [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]]
 
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]]
 
* [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]]
 
* [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]]
 
= Extensions by category =
 
25 categories:
 
* [[#Cardiac|Cardiac]]
 
* [[#Cardiac_MRI_toolkit|Cardiac MRI toolkit]]
 
* [[#Converters|Converters]]
 
* [[#Developer_Tools|Developer Tools]]
 
* [[#Diffusion|Diffusion]]
 
* [[#Editor_Effects|Editor Effects]]
 
* [[#Exporter|Exporter]]
 
* [[#Filtering|Filtering]]
 
** [[#Morphology|Morphology]]
 
* [[#IGT|IGT]]
 
* [[#Informatics|Informatics]]
 
* [[#Mesh_Generation|Mesh Generation]]
 
* [[#Microscopy|Microscopy]]
 
* [[#Multidimensional_data|Multidimensional data]]
 
* [[#Quantification|Quantification]]
 
* [[#Radiotherapy|Radiotherapy]]
 
* [[#Registration|Registration]]
 
* [[#Remote|Remote]]
 
* [[#Scoliosis|Scoliosis]]
 
* [[#Segmentation|Segmentation]]
 
* [[#Shape_Analysis|Shape Analysis]]
 
* [[#Tractography|Tractography]]
 
* [[#Training|Training]]
 
* [[#Utilities|Utilities]]
 
* [[#Vascular_Modeling_Toolkit|Vascular Modeling Toolkit]]
 
* [[#Wizards|Wizards]]
 
== Cardiac ==
 
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures]
 
== Cardiac MRI toolkit ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit]
 
== Converters ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension]
 
== Developer Tools ==
 
* [[Documentation/4.4/Extensions/ImageMaker|Image Maker]]
 
* [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]]
 
* [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]]
 
== Diffusion ==
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]
 
== Editor Effects ==
 
* [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]]
 
== Exporter ==
 
* [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]
 
== Filtering ==
 
=== Morphology ===
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]]
 
== IGT ==
 
* [[Documentation/4.4/Extensions/PortPlacement|Port Placement]]
 
* [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]]
 
* [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]]
 
* [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]
 
* [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]]
 
* [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]]
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]
 
* [[Documentation/4.4/Extensions/ResectionPlanner|Resection Planner]]
 
== Informatics ==
 
* [[Documentation/4.4/Extensions/Reporting|Reporting]]
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]]
 
* [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]]
 
* [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]]
 
== Mesh Generation ==
 
* [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]]
 
* [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]]
 
== Microscopy ==
 
* [[Documentation/4.4/Extensions/IASEM|IASEM]]
 
== Multidimensional data ==
 
* [[Documentation/4.4/Extensions/MultidimData|Multidim Data]]
 
== Quantification ==
 
* [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]]
 
* [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]]
 
== Radiotherapy ==
 
* [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]
 
== Registration ==
 
* [[Documentation/4.4/Extensions/CMFreg|CMFreg]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]
 
== Remote ==
 
* [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]]
 
== Scoliosis ==
 
* [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]]
 
== Segmentation ==
 
* [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation]]
 
* [http://www.nitrc.org/projects/abc ABC]
 
* [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]]
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
* [[Documentation/4.4/Extensions/OpenCAD|Open CAD]]
 
* [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]
 
* [[Documentation/4.4/Extensions/MABMIS|MABMIS]]
 
* [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]]
 
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect]
 
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]]
 
== Shape Analysis ==
 
* [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]]
 
== Tractography ==
 
* [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]]
 
* [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]]
 
== Training ==
 
* [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]]
 
== Utilities ==
 
* [[Documentation/4.4/Extensions/ThingiverseBrowser|Thingiverse Browser]]
 
== Vascular Modeling Toolkit ==
 
* [http://slicer.vmtk.org/ VMTK]
 
== Wizards ==
 
* [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]]
 
= Extensions by contributing organization =
 
54 contributing organizations:
 
* [[#Asclepios_INRIA.29_and_Nikos_Chrisochoides_.28CRTC|Asclepios INRIA) and Nikos Chrisochoides (CRTC]]
 
* [[#Boston_Childrens_Hospital|Boston Childrens Hospital]]
 
* [[#Brigham_and_Women_s_Hospital|Brigham and Women's Hospital]]
 
* [[#BWH|BWH]]
 
* [[#BWH___MGH|BWH & MGH]]
 
* [[#BWH.2C_SPL|BWH, SPL]]
 
* [[#BWH.2FUAB|BWH/UAB]]
 
* [[#CARMA|CARMA]]
 
* [[#College_of_Information_Engineering.2C_Zhejiang_University_of_Technology.2C_Hangzhou.2C_China|College of Information Engineering, Zhejiang University of Technology, Hangzhou, China]]
 
* [[#Crisalix|Crisalix]]
 
* [[#CRTC|CRTC]]
 
* [[#Department_of_Neurosurgery.2C_PLA_General_Hospital.2C_Beijing.2C_China|Department of Neurosurgery, PLA General Hospital, Beijing, China]]
 
* [[#Department_of_Orthodontics.2C_UNC|Department of Orthodontics, UNC]]
 
* [[#GE|GE]]
 
* [[#GE_GLobal_Research|GE GLobal Research]]
 
* [[#GT|GT]]
 
* [[#Isomics|Isomics]]
 
* [[#Kitware|Kitware]]
 
* [[#Massachusetts_General_Hospital|Massachusetts General Hospital]]
 
* [[#Moka_Creative_LLC.2C_Washington_University_in_St._Louis|Moka Creative LLC, Washington University in St. Louis]]
 
* [[#NIRAL.2C_UNC|NIRAL, UNC]]
 
* [[#Noware|Noware]]
 
* [[#Orobix|Orobix]]
 
* [[#PerkLab_at_Queen_s_University|Perk Lab at Queen's University]]
 
* [[#PerkLab.2C_Queen_s|Perk Lab, Queen's]]
 
* [[#PerkLab.2C_Queen_s_University|Perk Lab, Queen's University]]
 
* [[#PMH|PMH]]
 
* [[#Queen_s_University|Queen's University]]
 
* [[#Radiation_Medicine_Program.2C_Princess_Margaret_Hospital.2C_University_Health_Network_Toronto|Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto]]
 
* [[#SBU|SBU]]
 
* [[#SCI_Institute|SCI Institute]]
 
* [[#Shiga_University_of_Medical_Science.2C_Japan|Shiga University of Medical Science, Japan]]
 
* [[#Shiga_University_of_Medical_Science.2C_Japan.2C_SPL|Shiga University of Medical Science, Japan, SPL]]
 
* [[#SPL|SPL]]
 
* [[#SPL_and_BWH|SPL and BWH]]
 
* [[#SPL_B_W_Harvard|SPL B&W Harvard]]
 
* [[#SRI|SRI]]
 
* [[#Stony_Brook_University|Stony Brook University]]
 
* [[#Surgical_Planning_Lab|Surgical Planning Lab]]
 
* [[#UAB|UAB]]
 
* [[#UIowa|UIowa]]
 
* [[#UNC|UNC]]
 
* [[#Univ_of_Michigan|Univ of Michigan]]
 
* [[#University_College_Cork|University College Cork]]
 
* [[#University_of_Bern|University of Bern]]
 
* [[#University_of_Heidelberg|University of Heidelberg]]
 
* [[#University_of_Iowa|University of Iowa]]
 
* [[#University_of_Utah|University of Utah]]
 
* [[#Utah|Utah]]
 
* [[#UWA|UWA]]
 
* [[#Washington_University_in_St._Louis|Washington University in St. Louis]]
 
* [[#yogesh.40bwh.harvard.edu|yogesh@bwh.harvard.edu]]
 
== Asclepios INRIA) and Nikos Chrisochoides (CRTC ==
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]
 
== Boston Childrens Hospital ==
 
* [http://slicer.vmtk.org/ VMTK]
 
== Brigham and Women's Hospital ==
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]]
 
* [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]]
 
== BWH ==
 
* [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]]
 
* [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]]
 
* [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]]
 
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect]
 
* [[Documentation/4.4/Extensions/OpenCAD|Open CAD]]
 
* [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
* [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]]
 
== BWH & MGH ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
== BWH, SPL ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension]
 
== BWH/UAB ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
== CARMA ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit]
 
== College of Information Engineering, Zhejiang University of Technology, Hangzhou, China ==
 
* [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]]
 
== Crisalix ==
 
* [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]]
 
== CRTC ==
 
* [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]]
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]
 
== Department of Neurosurgery, PLA General Hospital, Beijing, China ==
 
* [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]]
 
== Department of Orthodontics, UNC ==
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]
 
== GE ==
 
* [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]]
 
== GE GLobal Research ==
 
* [[Documentation/4.4/Extensions/MABMIS|MABMIS]]
 
== GT ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
== Isomics ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
* [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]]
 
* [http://slicer.vmtk.org/ VMTK]
 
* [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]
 
* [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]]
 
== Kitware ==
 
* [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]]
 
* [[Documentation/4.4/Extensions/ImageMaker|Image Maker]]
 
* [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]]
 
* [[Documentation/4.4/Extensions/PortPlacement|Port Placement]]
 
* [http://slicer.vmtk.org/ VMTK]
 
* [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]
 
== Massachusetts General Hospital ==
 
* [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]]
 
== Moka Creative LLC, Washington University in St. Louis ==
 
* [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]]
 
== NIRAL, UNC ==
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]
 
== Noware ==
 
* [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]]
 
== Orobix ==
 
* [http://slicer.vmtk.org/ VMTK]
 
== PerkLab at Queen's University ==
 
* [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]]
 
== PerkLab, Queen's ==
 
* [[Documentation/4.4/Extensions/MultidimData|Multidim Data]]
 
== PerkLab, Queen's University ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]
 
* [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]]
 
* [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]]
 
* [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]]
 
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]]
 
== PMH ==
 
* [[Documentation/4.4/Extensions/MultidimData|Multidim Data]]
 
== Queen's University ==
 
* [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]]
 
* [[Documentation/4.4/Extensions/ResectionPlanner|Resection Planner]]
 
* [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]]
 
== Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto ==
 
* [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]]
 
* [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]]
 
== SBU ==
 
* [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
== SCI Institute ==
 
* [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]]
 
== Shiga University of Medical Science, Japan ==
 
* [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]]
 
== Shiga University of Medical Science, Japan, SPL ==
 
* [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]
 
== SPL ==
 
* [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]]
 
* [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]
 
* [[Documentation/4.4/Extensions/Reporting|Reporting]]
 
* [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]]
 
== SPL and BWH ==
 
* [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]]
 
== SPL B&W Harvard ==
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]
 
== SRI ==
 
* [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]]
 
== Stony Brook University ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect]
 
== Surgical Planning Lab ==
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]]
 
== UAB ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect]
 
* [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
* [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]]
 
== UIowa ==
 
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures]
 
== UNC ==
 
* [[Documentation/4.4/Extensions/CMFreg|CMFreg]]
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]
 
* [[Documentation/4.4/Extensions/MABMIS|MABMIS]]
 
* [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]]
 
* [[Documentation/4.4/Extensions/PortPlacement|Port Placement]]
 
== Univ of Michigan ==
 
* [[Documentation/4.4/Extensions/CMFreg|CMFreg]]
 
== University College Cork ==
 
* [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation]]
 
== University of Bern ==
 
* [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]]
 
== University of Heidelberg ==
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]]
 
== University of Iowa ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension]
 
== University of Utah ==
 
* [http://www.nitrc.org/projects/abc ABC]
 
== Utah ==
 
* [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
== UWA ==
 
* [[Documentation/4.4/Extensions/ThingiverseBrowser|Thingiverse Browser]]
 
== Washington University in St. Louis ==
 
* [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]]
 
== yogesh@bwh.harvard.edu ==
 
* [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]]
 
= Extensions by contributing individual =
 
129 contributing individuals:
 
* [[#Akila_Viswanathan|Akila Viswanathan]]
 
* [[#Alan_Morris|Alan Morris]]    <small>(Utah)</small>
 
* [[#Alex_Yarmarkovich|Alex Yarmarkovich]]    <small>(Kitware))</small>
 
* [[#Alireza_Mehrtash|Alireza Mehrtash]]    <small>(SPL and BWH)</small>
 
* [[#Allen_Tannenbaum|Allen Tannenbaum]]    <small>(Stony Brook University)</small>
 
* [[#Andinet_Enquobahrie|Andinet Enquobahrie]]    <small>(Kitware)</small>
 
* [[#Andras_Lasso|Andras Lasso]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Andre_Mastmeyer|Andre Mastmeyer]]
 
* [[#Andrey_Fedorov|Andrey Fedorov]]    <small>(SPL B&W Harvard)</small>
 
* [[#Andriy_Fedorov|Andriy Fedorov]]    <small>(BWH)</small>
 
* [[#Andriy_Kot|Andriy Kot]]    <small>(CRTC)</small>
 
* [[#Antonio_Damato|Antonio Damato]]
 
* [[#Antonio_Tristan-Vega|Antonio Tristan-Vega]]    <small>(Isomics)</small>
 
* [[#Arie_Nakhmani|Arie Nakhmani]]    <small>(UAB)</small>
 
* [[#Arnaud_Gelas|Arnaud Gelas]]    <small>(Crisalix)</small>
 
* [[#Atsushi_Yamada|Atsushi Yamada]]    <small>(SNR)</small>
 
* [[#Beatriz_Paniagua|Beatriz Paniagua]]    <small>(UNC)</small>
 
* [[#Bill_Lorensen|Bill Lorensen]]    <small>(Noware)</small>
 
* [[#Bradley_Lowekamp|Bradley Lowekamp]]    <small>(MSC/NLM)</small>
 
* [[#Brig_Bagley|Brig Bagley]]    <small>(SCI Institute)</small>
 
* [[#Carl-Fredrik_Westin|Carl-Fredrik Westin]]
 
* [[#Christian_Baumgartner|Christian Baumgartner]]
 
* [[#Csaba_Pinter|Csaba Pinter]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Dan_Marcus|Dan Marcus]]    <small>(Washington University in St. Louis)</small>
 
* [[#Daniel_Haehn|Daniel Haehn]]    <small>(UPenn)</small>
 
* [[#Danny_Perry|Danny Perry]]    <small>(Utah)</small>
 
* [[#Demian_Wasssermann|Demian Wasssermann]]
 
* [[#Dinggang_Shen|Dinggang Shen]]    <small>(UNC)</small>
 
* [[#Ethan_Ulrich|Ethan Ulrich]]    <small>(Univ. of Iowa)</small>
 
* [[#Eugene_Kholmovski|Eugene Kholmovski]]    <small>(CARMA)</small>
 
* [[#Fotis_Drakopoulos|Fotis Drakopoulos]]    <small>(CRTC)</small>
 
* [[#Francois_Budin|Francois Budin]]    <small>(NIRAL, UNC)</small>
 
* [[#Franklin_King|Franklin King]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Greg_Gardner|Greg Gardner]]    <small>(Utah)</small>
 
* [[#Greg_Sharp|Greg Sharp]]    <small>(MGH, Boston)</small>
 
* [[#Guillaume_Pernelle|Guillaume Pernelle]]
 
* [[#Hans_Johnson|Hans Johnson]]    <small>(SINAPSE)</small>
 
* [[#Ipek_Oguz|Ipek Oguz]]
 
* [[#Ivan_Kolesov|Ivan Kolesov]]    <small>(Stony Brook University)</small>
 
* [[#Jan_Egger|Jan Egger]]
 
* [[#Jayender_Jagadeesan|Jayender Jagadeesan]]    <small>(BWH)</small>
 
* [[#Jean-Christophe_Fillion-Robin|Jean-Christophe Fillion-Robin]]    <small>(Kitware)</small>
 
* [[#Jennifer_Andrea|Jennifer Andrea]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Jessica_Forbes|Jessica Forbes]]    <small>(SINAPSE)</small>
 
* [[#Jiashu_Zhang|Jiashu Zhang]]    <small>(Department of Neurosurgery, PLA General Hospital, Beijing, China)</small>
 
* [[#Jim_Miller|Jim Miller]]    <small>(GE)</small>
 
* [[#Jonathan_Bronson|Jonathan Bronson]]    <small>(SCI Institute)</small>
 
* [[#Josh_Cates|Josh Cates]]    <small>(Utah)</small>
 
* [[#Julien_Finet|Julien Finet]]    <small>(Kitware)</small>
 
* [[#Junichi_Tokuda|Junichi Tokuda]]    <small>(BWH)</small>
 
* [[#Karl_Fritscher|Karl Fritscher]]    <small>(BWH & MGH)</small>
 
* [[#Kent_Williams|Kent Williams]]    <small>(UIowa)</small>
 
* [[#Kevin_Wang|Kevin Wang]]    <small>(Princess Margaret Cancer Centre)</small>
 
* [[#Kilian_Pohl|Kilian Pohl]]    <small>(UPenn)</small>
 
* [[#Koichiro_Murakami|Koichiro Murakami]]    <small>(SUMS)</small>
 
* [[#Lauren_Barber|Lauren Barber]]
 
* [[#Laurent_Chauvin|Laurent Chauvin]]    <small>(BWH)</small>
 
* [[#Liang-Jia_Zhu|Liang-Jia Zhu]]    <small>(UAB)</small>
 
* [[#Liangjia_Zhu|Liangjia Zhu]]    <small>(Stony Brook University)</small>
 
* [[#Luca_Antiga|Luca Antiga]]    <small>(Orobix)</small>
 
* [[#Luis_G._Torres|Luis G. Torres]]    <small>(UNC)</small>
 
* [[#Luping_Fang|Luping Fang]]    <small>(College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)</small>
 
* [[#Mahnaz_Maddah|Mahnaz Maddah]]    <small>(SRI)</small>
 
* [[#Manson_Winsauer|Manson Winsauer]]    <small>(UNC)</small>
 
* [[#Marcel_Prastawa|Marcel Prastawa]]    <small>(University of Utah)</small>
 
* [[#Martin_Styner|Martin Styner]]    <small>(UNC)</small>
 
* [[#Matt_Lougheed|Matt Lougheed]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Mattea_Welch|Mattea Welch]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Matthew_Holden|Matthew Holden]]    <small>(Queen's University)</small>
 
* [[#Matthew_S._Holden|Matthew S. Holden]]    <small>(Queen's University)</small>
 
* [[#Mauricio_Reyes|Mauricio Reyes]]    <small>(University of Bern)</small>
 
* [[#Ming-ching_Chang|Ming-ching Chang]]    <small>(GE)</small>
 
* [[#Minjeong_Kim|Minjeong Kim]]    <small>(UNC)</small>
 
* [[#Nabgha_Fahrat|Nabgha Fahrat]]
 
* [[#Nicole_Aucoin|Nicole Aucoin]]    <small>(BWH)</small>
 
* [[#Nigel_Goh|Nigel Goh]]    <small>(UWA)</small>
 
* [[#Nikos_Chrisochoides|Nikos Chrisochoides]]    <small>(CRTC)</small>
 
* [[#Olivier_Clatz|Olivier Clatz]]    <small>(Asclepios INRIA) and Nikos Chrisochoides (CRTC)</small>
 
* [[#Pat_Marion|Pat Marion]]    <small>(Kitware)</small>
 
* [[#Patricio_Vela|Patricio Vela]]    <small>(GT)</small>
 
* [[#Paul_Mercea|Paul Mercea]]    <small>(University of Heidelberg)</small>
 
* [[#Pengdong_Xiao|Pengdong Xiao]]    <small>(Department of Orthodontics, UNC)</small>
 
* [[#Peter_Black|Peter Black]]    <small>(BWH)</small>
 
* [[#Peter_Karasev|Peter Karasev]]    <small>(Georgia Tech)</small>
 
* [[#Peter_Savadjiev|Peter Savadjiev]]    <small>(Kitware))</small>
 
* [[#Pietro_Nardelli|Pietro Nardelli]]    <small>(University College Cork)</small>
 
* [[#Qing_Pan|Qing Pan]]    <small>(College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)</small>
 
* [[#Rick_Herrick|Rick Herrick]]    <small>(Washington University in St. Louis)</small>
 
* [[#Rob_MacLeod|Rob Mac Leod]]    <small>(Utah)</small>
 
* [[#Ron_Kikinis|Ron Kikinis]]    <small>(BWH)</small>
 
* [[#Ruifeng_Chen|Ruifeng Chen]]    <small>(College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)</small>
 
* [[#Ryan_Eckbo|Ryan Eckbo]]
 
* [[#S|S]]
 
* [[#Salma_Bengali|Salma Bengali]]    <small>(CARMA)</small>
 
* [[#Sam_Song|Sam Song]]
 
* [[#Stefan_Bauer|Stefan Bauer]]    <small>(University of Bern)</small>
 
* [[#Stefan_Lienhard|Stefan Lienhard]]
 
* [[#Steve_Pieper|Steve Pieper]]    <small>(SPL)</small>
 
* [[#Sunil_Kumar|Sunil Kumar]]    <small>(Moka Creative, LLC, kumar.sunil.p@gmail.com)</small>
 
* [[#Sylvain_Bouix|Sylvain Bouix]]    <small>(BWH)</small>
 
* [[#Tamas_Ungi|Tamas Ungi]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Thomas_Fejes|Thomas Fejes]]    <small>(University of Bern)</small>
 
* [[#Tina_Kapur|Tina Kapur]]
 
* [[#Tobias_Penzkofer|Tobias Penzkofer]]
 
* [[#Vinicius_Boen|Vinicius Boen]]    <small>(Univ of Michigan)</small>
 
* [[#Vivek_Narayan|Vivek Narayan]]    <small>(BWH)</small>
 
* [[#Xiaofeng_Liu|Xiaofeng Liu]]    <small>(GE GLobal Research)</small>
 
* [[#Xiaojun_Chen|Xiaojun Chen]]
 
* [[#Xiaolei_Chen|Xiaolei Chen]]    <small>(Department of Neurosurgery, PLA General Hospital, Beijing, China)</small>
 
* [[#y_Wells|y Wells]]
 
* [[#Yi_Gao|Yi Gao]]    <small>(BWH/UAB)</small>
 
* [[#Yingxuan_Zhu|Yingxuan Zhu]]    <small>(GE)</small>
 
* [[#Yinpeng_Li|Yinpeng Li]]
 
* [[#Yixun_Liu|Yixun Liu]]    <small>(CRTC)</small>
 
* [[#Yogesh_Rathi|Yogesh Rathi]]    <small>(yogesh@bwh.harvard.edu)</small>
 
* [[#Yundi_Shi|Yundi Shi]]
 
== Akila Viswanathan ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]
 
== Alan Morris ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit]
 
* [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
== Alex Yarmarkovich ==
 
* [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]]
 
== Alireza Mehrtash ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]
 
* [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]]
 
== Allen Tannenbaum ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect]
 
* [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
* [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]]
 
== Andinet Enquobahrie ==
 
* [[Documentation/4.4/Extensions/PortPlacement|Port Placement]]
 
== Andras Lasso ==
 
* [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]]
 
* [[Documentation/4.4/Extensions/MultidimData|Multidim Data]]
 
* [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]]
 
* [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]]
 
* [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]]
 
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]]
 
== Andre Mastmeyer ==
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]
 
== Andrey Fedorov ==
 
* [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]]
 
* [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]]
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]]
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension]
 
* [[Documentation/4.4/Extensions/Reporting|Reporting]]
 
* [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]]
 
* [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]]
 
== Andriy Fedorov ==
 
* [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]]
 
== Andriy Kot ==
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]
 
== Antonio Damato ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]
 
== Antonio Tristan-Vega ==
 
* [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]]
 
== Arie Nakhmani ==
 
* [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]]
 
== Arnaud Gelas ==
 
* [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]]
 
== Atsushi Yamada ==
 
* [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]]
 
== Beatriz Paniagua ==
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]
 
== Bill Lorensen ==
 
* [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]]
 
== Bradley Lowekamp ==
 
* [[Documentation/4.4/Extensions/IASEM|IASEM]]
 
== Brig Bagley ==
 
* [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]]
 
== Carl-Fredrik Westin ==
 
* [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]]
 
* [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]]
 
== Christian Baumgartner ==
 
* [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]]
 
== Csaba Pinter ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]
 
* [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]]
 
== Dan Marcus ==
 
* [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]]
 
== Daniel Haehn ==
 
* [http://slicer.vmtk.org/ VMTK]
 
== Danny Perry ==
 
* [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
== Demian Wasssermann ==
 
* [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]]
 
== Dinggang Shen ==
 
* [[Documentation/4.4/Extensions/MABMIS|MABMIS]]
 
== Ethan Ulrich ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension]
 
== Eugene Kholmovski ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit]
 
== Fotis Drakopoulos ==
 
* [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]]
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]
 
== Francois Budin ==
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]
 
* [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]]
 
== Franklin King ==
 
* [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]]
 
== Greg Gardner ==
 
* [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
== Greg Sharp ==
 
* [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]]
 
== Guillaume Pernelle ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]
 
== Hans Johnson ==
 
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures]
 
* [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]]
 
== Ipek Oguz ==
 
* [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]]
 
== Ivan Kolesov ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect]
 
== Jan Egger ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]
 
== Jayender Jagadeesan ==
 
* [[Documentation/4.4/Extensions/OpenCAD|Open CAD]]
 
* [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]]
 
== Jean-Christophe Fillion-Robin ==
 
* [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]]
 
* [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]]
 
* [http://slicer.vmtk.org/ VMTK]
 
* [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]
 
== Jennifer Andrea ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]
 
== Jessica Forbes ==
 
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures]
 
== Jiashu Zhang ==
 
* [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]]
 
== Jim Miller ==
 
* [[Documentation/4.4/Extensions/MABMIS|MABMIS]]
 
* [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]]
 
== Jonathan Bronson ==
 
* [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]]
 
== Josh Cates ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit]
 
* [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
== Julien Finet ==
 
* [[Documentation/4.4/Extensions/ImageMaker|Image Maker]]
 
== Junichi Tokuda ==
 
* [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]]
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]]
 
* [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]
 
* [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]]
 
== Karl Fritscher ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
== Kent Williams ==
 
* [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]]
 
== Kevin Wang ==
 
* [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]]
 
* [[Documentation/4.4/Extensions/MultidimData|Multidim Data]]
 
* [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]]
 
== Kilian Pohl ==
 
* [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]]
 
== Koichiro Murakami ==
 
* [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]
 
== Lauren Barber ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]
 
== Laurent Chauvin ==
 
* [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]]
 
* [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]
 
* [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]]
 
== Liang-Jia Zhu ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
== Liangjia Zhu ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect]
 
* [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
== Luca Antiga ==
 
* [http://slicer.vmtk.org/ VMTK]
 
== Luis G. Torres ==
 
* [[Documentation/4.4/Extensions/PortPlacement|Port Placement]]
 
== Luping Fang ==
 
* [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]]
 
== Mahnaz Maddah ==
 
* [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]]
 
== Manson Winsauer ==
 
* [[Documentation/4.4/Extensions/CMFreg|CMFreg]]
 
== Marcel Prastawa ==
 
* [http://www.nitrc.org/projects/abc ABC]
 
== Martin Styner ==
 
* [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]]
 
== Matt Lougheed ==
 
* [[Documentation/4.4/Extensions/ResectionPlanner|Resection Planner]]
 
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]]
 
== Mattea Welch ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]
 
== Matthew Holden ==
 
* [[Documentation/4.4/Extensions/MultidimData|Multidim Data]]
 
== Matthew S. Holden ==
 
* [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]]
 
== Mauricio Reyes ==
 
* [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]]
 
== Ming-ching Chang ==
 
* [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]]
 
== Minjeong Kim ==
 
* [[Documentation/4.4/Extensions/MABMIS|MABMIS]]
 
== Nabgha Fahrat ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]
 
== Nicole Aucoin ==
 
* [[Documentation/4.4/Extensions/Reporting|Reporting]]
 
== Nigel Goh ==
 
* [[Documentation/4.4/Extensions/ThingiverseBrowser|Thingiverse Browser]]
 
== Nikos Chrisochoides ==
 
* [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]]
 
== Olivier Clatz ==
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]
 
== Pat Marion ==
 
* [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]
 
== Patricio Vela ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
== Paul Mercea ==
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]]
 
== Pengdong Xiao ==
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]
 
== Peter Black ==
 
* [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]]
 
== Peter Karasev ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
== Peter Savadjiev ==
 
* [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]]
 
* [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]]
 
== Pietro Nardelli ==
 
* [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation]]
 
== Qing Pan ==
 
* [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]]
 
== Rick Herrick ==
 
* [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]]
 
== Rob MacLeod ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit]
 
* [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
== Ron Kikinis ==
 
* [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]]
 
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect]
 
== Ruifeng Chen ==
 
* [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]]
 
== Ryan Eckbo ==
 
* [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]]
 
== S ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]
 
== Salma Bengali ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit]
 
== Sam Song ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]
 
== Stefan Bauer ==
 
* [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]]
 
== Stefan Lienhard ==
 
* [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]]
 
== Steve Pieper ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
* [[Documentation/4.4/Extensions/Reporting|Reporting]]
 
* [http://slicer.vmtk.org/ VMTK]
 
* [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]
 
* [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]]
 
* [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]]
 
== Sunil Kumar ==
 
* [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]]
 
== Sylvain Bouix ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
== Tamas Ungi ==
 
* [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]]
 
* [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]]
 
* [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]]
 
== Thomas Fejes ==
 
* [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]]
 
== Tina Kapur ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]
 
== Tobias Penzkofer ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]
 
== Vinicius Boen ==
 
* [[Documentation/4.4/Extensions/CMFreg|CMFreg]]
 
== Vivek Narayan ==
 
* [[Documentation/4.4/Extensions/OpenCAD|Open CAD]]
 
== Xiaofeng Liu ==
 
* [[Documentation/4.4/Extensions/MABMIS|MABMIS]]
 
== Xiaojun Chen ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]
 
== Xiaolei Chen ==
 
* [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]]
 
== y Wells ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]
 
== Yi Gao ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect]
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]
 
* [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
== Yingxuan Zhu ==
 
* [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]]
 
== Yinpeng Li ==
 
* [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]]
 
== Yixun Liu ==
 
* [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]]
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]
 
== Yogesh Rathi ==
 
* [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]]
 
== Yundi Shi ==
 
* [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]]
 

Latest revision as of 17:32, 21 November 2019

Home < Documentation < 4.4 < ModuleExtensionListing



List of extensions known to be broken

Modules by category

36 categories:

BRAINS

LabelStatistics

  • BRAINSLabel Stats (cli, built-in)

Cardiac MRI Toolkit

Converters

Developer Tools

DICOM Plugins

  • DICOMLongitudinal PETCTPlugin
  • DICOMRWVMPlugin
  • Multi Volume Importer Plugin
  • DICOMPETSUVPlugin
  • Dicom Rt Import Plugin
  • DICOMDiffusion Volume Plugin
  • DICOMSegmentation Plugin
  • Dicom Sro Import Plugin
  • DICOMScalar Volume Plugin
  • DICOMSlicer Data Bundle Plugin

Editor Extensions

Matlab

Diffusion

Diffusion Data Conversion

  • DWIConvert (cli, built-in)

Diffusion Tensor Images

Diffusion Weighted Images

FiberAnalysis

Tractography

Editor Effects

EditorEffect

Endoscopy

Examples

Exporter

File

Filtering

Arithmetic

Denoising

Morphology

IGT

Informatics

Legacy

Converters

Diffusion

Denoising

Diffusion Data Conversion

  • DTIimport (cli, built-in)
  • DTIexport (cli, built-in)

Filtering

Registration

Work in Progress

Diffusion Tensor

Test
  • Diffusion Tensor Test (cli, built-in)

Margin Calculator

Mesh Generation

MeshGeneration

Microscopy

Multidimensional data

MultiVolume Support

Perk Tutor

Plastimatch

Registration

Utilities

Quantification

ChangeQuantification

Radiotherapy

Registration

Specialized

Segmentation

Specialized

Shape Analysis

CMF Registration

Voxelbase Registration

Slicelets

Surface Models

Testing

  • Self Tests
  • CLIROITest (cli, built-in)
  • CLI4Test
  • Threshold Threading Test
  • Scoliosis Monitoring (scripted, bundled in Scoliosis extension)
  • Performance Tests
  • Slicer MRBTest

IGT Tests

  • Breach Warning Self Test
  • Watchdog Self Test

SlicerRT Tests

TestCases

  • Slice Link Logic (scripted, built-in)
  • Atlas Tests
  • RSNAQuant Tutorial
  • Volume Rendering Scene Close (scripted, built-in)
  • test tractography display
  • slicer Close Crash Bug2590
  • Subject Hierarchy Generic Self Test
  • Scene Performance (scripted, built-in)
  • Charting (scripted, built-in)
  • Neurosurgical Planning Tutorial Markups Self Test
  • Markups In Compare Viewers Self Test
  • Cardiac Agatston Measures (scripted, bundled in Cardiac Agatston Measures extension)
  • fiber visibility crash2438
  • scene Import2428
  • RSNAVis Tutorial
  • JRC2013Vis
  • RSNA2012Prostate Demo
  • Add Many Markups Fiducial Test
  • Colors Scalar Bar Self Test
  • Markups In Views Self Test
  • Subject Hierarchy Core Plugins Self Test
  • Change Tracker Self Test
  • Fiducial Layout Switch Bug1914
  • View Controllers Slice Interpolation Bug1926
  • Slicer4Minute (scripted, built-in)
  • label Toggle Bug2049

Unspecified

  • BRAINSDWICleanup (cli, built-in)

Utilities

BRAINS

  • BRAINSTransform Convert (cli, built-in)

Vascular Modeling Toolkit

Wizards

Work in Progress

Converters

Informatics

TestCases

  • Reporting Self Test
  • Label To DICOMSEGConverter Self Test

Modules by name

233 modules: