Difference between revisions of "Documentation/4.4/ModuleExtensionListing"

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<noinclude>{{:Documentation/4.4/ModuleExtensionListing/TOC}}</noinclude>
 
<noinclude>{{:Documentation/4.4/ModuleExtensionListing/TOC}}</noinclude>
= Modules by name =
 
218 modules:
 
* [http://www.nitrc.org/projects/abc ABC]    <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small>
 
* [[Documentation/4.4/Modules/ACPCTransform|ACPCTransform]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/AddScalarVolumes|Add Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation]] extension)</small>
 
* [[Documentation/4.4/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Extensions/CMFreg|Apply Matrix]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Beams]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Bin Shrink]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Modules/BRAINSDemonWarp|BRAINSDemon Warp]]    <small>(cli, built-in)</small>
 
* BRAINSDWICleanup    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/BRAINSFit|BRAINSFit]]    <small>(cli, built-in)</small>
 
* BRAINSLabel Stats    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/BRAINSResample|BRAINSResample]]    <small>(cli, built-in)</small>
 
* BRAINSResize    <small>(cli, built-in)</small>
 
* BRAINSROIAuto    <small>(cli, built-in)</small>
 
* BRAINSStrip Rotation    <small>(cli, built-in)</small>
 
* BRAINSTransform Convert    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Breach Warning]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
* [[Documentation/4.4/Modules/CastScalarVolume|Cast Scalar Volume]]    <small>(cli, built-in)</small>
 
* [http://slicer.vmtk.org/ Centerline Computation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/4.4/Modules/ChangeTracker|Change Tracker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
* [[Documentation/4.4/Modules/CheckerBoardFilter|Checker Board Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/CleaverExtension|Cleaver CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Boolean REMOVEFilter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Connected Threshold Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Isolated Connected Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/CollectFiducials|Collect Fiducials]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/Colors|Colors]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/CompareVolumes|Compare Volumes]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/ContourComparison|Contour Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ContourMorphology|Contour Morphology]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Contours|Contours]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
* [[Documentation/4.4/Modules/CreateDICOMSeries|Create DICOMSeries]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Create Models]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/CropVolume|Crop Volume]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]] extension)</small>
 
* [[Documentation/4.4/Modules/Data|Data]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/DataProbe|Data Probe]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/DataStore|Data Store]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/DiceComputation|Dice Computation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]] extension)</small>
 
* [[Documentation/4.4/Modules/DICOM|DICOM]]    <small>(scripted, built-in)</small>
 
* DICOM2Full Brain Tractography    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/DicomRtExport|Dicom Rt Export]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomRtImport|Dicom Rt Import]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomSroExport|Dicom Sro Export]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomSroImport|Dicom Sro Import]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DiffusionTensorScalarMeasurements|Diffusion Tensor Scalar Measurements]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Dilate Label]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseAccumulation|Dose Accumulation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseComparison|Dose Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseVolumeHistogram|Dose Volume Histogram]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Dvh Comparison]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* DWIConvert    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIToDTIEstimation|DWITo DTIEstimation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/EMSegment|EMSegment]]    <small>(loadable, built-in)</small>
 
* EMSegment Command Line    <small>(cli, built-in)</small>
 
* EMSegment Quick    <small>(loadable, built-in)</small>
 
* EMSegment Transform To New Format    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Endoscopy|Endoscopy]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Label]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
 
* [[Documentation/4.4/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/FastGrowCut|Fast Grow Cut]]    <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small>
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
* Fiber Bundle Label Select    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Fiber Compare]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Modules/FiducialRegistration|Fiducial Registration]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Fiducial Registration Wizard]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Fiducials To Model Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/FinslerTractography|Finsler Tractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]]    <small>(cli, built-in)</small>
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo]    <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
* [[Documentation/4.4/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleGrindPeakImageFilter|Grayscale Grind Peak Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleModelMaker|Grayscale Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/GyroGuide|Gyro Guide]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]] extension)</small>
 
* [[Documentation/4.4/Modules/HeterogeneityCAD|Heterogeneity CAD]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small>
 
* [[Documentation/4.4/Modules/HistogramMatching|Histogram Matching]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/IASEM|IASEMImport]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|IASEMImport Series]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Testing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Training]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/4.4/Modules/ImageLabelCombine|Image Label Combine]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/IntensityDifferenceMetric|Intensity Difference Metric]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small>
 
* [[Documentation/4.4/Modules/Isodose|Isodose]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter KUtil]    <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
* [[Documentation/4.4/Modules/LabelAddition|Label Addition]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelExtraction|Label Extraction]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelMapSmoothing|Label Map Smoothing]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Label Object Statistics]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/Reporting|Label To DICOMSEGConverter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 
* [[Documentation/4.4/Modules/LandmarkRegistration|Landmark Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
* [[Documentation/4.4/Modules/LASegmentationWorkflow|LASegmentation Workflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/4.4/Modules/Markups|Markups]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/MaskScalarVolume|Mask Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MedianImageFilter|Median Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MergeModels|Merge Models]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Merge Stat With Fiber]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Modules/MeshCompression|Mesh Compression]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Metafile Importer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Modules/ModelMaker|Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Model Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/Models|Models]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/ModelToLabelMap|Model To Label Map]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiplyScalarVolumes|Multiply Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
* [[Documentation/4.4/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/OpenIGTLinkIF|Open IGTLink IF]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/OpenIGTLinkRemote|Open IGTLink Remote]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/OrientScalarVolume|Orient Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/PathExplorer|Path Explorer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small>
 
* [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small>
 
* Perform Metric Test    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/PerkEvaluator|Perk Evaluator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Extensions/PET-IndiC|PETIndi C]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Pivot Calibration]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Planar Image]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer bspline]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer landwarp]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Plastimatch Py]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Plm Register]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/PlusRemote|Plus Remote]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/PortPlacement|Port Placement]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PortPlacement|Port Placement]] extension)</small>
 
* [[Documentation/4.4/Modules/ProbeVolumeWithModel|Probe Volume With Model]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/PerkTutor|Python Metrics Calculator]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Extensions/PET-IndiC|Quantitative Indices CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Extensions/PET-IndiC|Quantitative Indices Tool]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Modules/Reformat|Reformat]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Extensions/Reporting|Reporting]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 
* [[Documentation/4.4/Modules/ResampleDTIVolume|Resample DTIVolume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ResampleScalarVectorDWIVolume|Resample Scalar Vector DWIVolume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ResectionVolume|Resection Volume]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ResectionPlanner|Resection Planner]] extension)</small>
 
* [[Documentation/4.4/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SampleData|Sample Data]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/ScarVisualization|Scar Visualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/SceneViews|Scene Views]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
* [[Documentation/4.4/Modules/SegmentCAD|Segment CAD]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequence Browser]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequences]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Modules/SimpleFilters|Simple Filters]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/SimpleRegionGrowingSegmentation|Simple Region Growing Segmentation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small>
 
* [[Documentation/4.4/Modules/SobolevSegmenter|Sobolev Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Spacing Aware Curvature Diffusion]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
* [[Documentation/4.4/Modules/SubjectHierarchy|Subject Hierarchy]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/SubtractScalarVolumes|Subtract Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/CMFreg|Surface Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/SurfaceToolbox|Surface Toolbox]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
* [[Documentation/4.4/Modules/SwissSkullStripper|Swiss Skull Stripper]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]] extension)</small>
 
* [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] extension)</small>
 
* [[Documentation/4.4/Modules/ThingiverseBrowser|Thingiverse Browser]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ThingiverseBrowser|Thingiverse Browser]] extension)</small>
 
* [[Documentation/4.4/Modules/ThresholdScalarVolume|Threshold Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/TrackerStabilizer|Tracker Stabilizer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small>
 
* [[Documentation/4.4/Modules/TractographyDisplay|Tractography Display]]    <small>(loadable, built-in)</small>
 
* Tractography Interactive Seeding    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Transform Fusion]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/TransformRecorder|Transform Recorder]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Ultrasound Snapshots]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/Units|Units]]    <small>(loadable, built-in)</small>
 
* VBRAINSDemon Warp    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/VectorToScalarVolume|Vector To Scalar Volume]]    <small>(scripted, built-in)</small>
 
* [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Vff File Reader]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Model]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small>
 
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Roi]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small>
 
* [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/VolumeResliceDriver|Volume Reslice Driver]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/Volumes|Volumes]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/VotingBinaryHoleFillingImageFilter|Voting Binary Hole Filling Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Watchdog]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/Welcome|Welcome]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small>
 
* [[Documentation/4.4/Modules/WorkflowSegmentation|Workflow Segmentation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Extensions/XNATSlicer|Xnat Slicer]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] extension)</small>
 
 
= Modules by category =
 
= Modules by category =
37 categories:
+
36 categories:
* [[#BRAINS|BRAINS]]
+
* [[#Modules_by_category_BRAINS|BRAINS]]
** [[#LabelStatistics|Label Statistics]]
+
** [[#Modules_by_category_BRAINS_LabelStatistics|Label Statistics]]
* [[#Cardiac_MRI_Toolkit|Cardiac MRI Toolkit]]
+
* [[#Modules_by_category_Cardiac_MRI_Toolkit|Cardiac MRI Toolkit]]
* [[#CMF_Registration|CMF Registration]]
+
* [[#Modules_by_category_Converters|Converters]]
** [[#Voxelbase_Registration|Voxelbase Registration]]
+
* [[#Modules_by_category_Developer_Tools|Developer Tools]]
* [[#Converters|Converters]]
+
** [[#Modules_by_category_Developer_Tools_DICOM_Plugins|DICOM Plugins]]
* [[#Developer_Tools|Developer Tools]]
+
** [[#Modules_by_category_Developer_Tools_Editor_Extensions|Editor Extensions]]
** [[#DICOM_Plugins|DICOM Plugins]]
+
** [[#Modules_by_category_Developer_Tools_Matlab|Matlab]]
** [[#Editor_Extensions|Editor Extensions]]
+
* [[#Modules_by_category_Diffusion|Diffusion]]
** [[#Matlab|Matlab]]
+
** [[#Modules_by_category_Diffusion_Diffusion_Data_Conversion|Diffusion Data Conversion]]
* [[#Diffusion|Diffusion]]
+
** [[#Modules_by_category_Diffusion_Diffusion_Tensor_Images|Diffusion Tensor Images]]
** [[#Diffusion_Data_Conversion|Diffusion Data Conversion]]
+
** [[#Modules_by_category_Diffusion_Diffusion_Weighted_Images|Diffusion Weighted Images]]
** [[#Diffusion_Tensor_Images|Diffusion Tensor Images]]
+
** [[#Modules_by_category_Diffusion_FiberAnalysis|Fiber Analysis]]
** [[#Diffusion_Weighted_Images|Diffusion Weighted Images]]
+
** [[#Modules_by_category_Diffusion_Tractography|Tractography]]
** [[#FiberAnalysis|Fiber Analysis]]
+
* [[#Modules_by_category_Editor_Effects|Editor Effects]]
** [[#Tractography|Tractography]]
+
* [[#Modules_by_category_EditorEffect|Editor Effect]]
* [[#Editor_Effects|Editor Effects]]
+
* [[#Modules_by_category_Endoscopy|Endoscopy]]
* [[#EditorEffect|Editor Effect]]
+
* [[#Modules_by_category_Examples|Examples]]
* [[#Endoscopy|Endoscopy]]
+
* [[#Modules_by_category_Exporter|Exporter]]
* [[#Examples|Examples]]
+
* [[#Modules_by_category_File|File]]
* [[#Exporter|Exporter]]
+
* [[#Modules_by_category_Filtering|Filtering]]
* [[#File|File]]
+
** [[#Modules_by_category_Filtering_Arithmetic|Arithmetic]]
* [[#Filtering|Filtering]]
+
** [[#Modules_by_category_Filtering_Denoising|Denoising]]
** [[#Arithmetic|Arithmetic]]
+
** [[#Modules_by_category_Filtering_Morphology|Morphology]]
** [[#Denoising|Denoising]]
+
* [[#Modules_by_category_IGT|IGT]]
** [[#Morphology|Morphology]]
+
* [[#Modules_by_category_Informatics|Informatics]]
* [[#IGT|IGT]]
+
* [[#Modules_by_category_Legacy|Legacy]]
* [[#Informatics|Informatics]]
+
** [[#Modules_by_category_Legacy_Converters|Converters]]
* [[#Legacy|Legacy]]
+
** [[#Modules_by_category_Legacy_Diffusion|Diffusion]]
** [[#Converters|Converters]]
+
*** [[#Modules_by_category_Diffusion_Denoising|Denoising]]
** [[#Diffusion|Diffusion]]
+
*** [[#Modules_by_category_Diffusion_Diffusion_Data_Conversion|Diffusion Data Conversion]]
*** [[#Denoising|Denoising]]
+
** [[#Modules_by_category_Legacy_Filtering|Filtering]]
*** [[#Diffusion_Data_Conversion|Diffusion Data Conversion]]
+
** [[#Modules_by_category_Legacy_Registration|Registration]]
** [[#Filtering|Filtering]]
+
** [[#Modules_by_category_Legacy_Work_in_Progress|Work in Progress]]
** [[#Registration|Registration]]
+
*** [[#Modules_by_category_Work_in_Progress_Diffusion_Tensor|Diffusion Tensor]]
** [[#Work_in_Progress|Work in Progress]]
+
**** [[#Modules_by_category_Diffusion_Tensor_Test|Test]]
*** [[#Diffusion_Tensor|Diffusion Tensor]]
+
* [[#Modules_by_category_Margin_Calculator|Margin Calculator]]
**** [[#Test|Test]]
+
* [[#Modules_by_category_Mesh_Generation|Mesh Generation]]
* [[#Mesh_Generation|Mesh Generation]]
+
* [[#Modules_by_category_MeshGeneration|Mesh Generation]]
* [[#MeshGeneration|Mesh Generation]]
+
* [[#Modules_by_category_Microscopy|Microscopy]]
* [[#Microscopy|Microscopy]]
+
* [[#Modules_by_category_Multidimensional_data|Multidimensional data]]
* [[#Multidimensional_data|Multidimensional data]]
+
* [[#Modules_by_category_MultiVolume_Support|Multi Volume Support]]
* [[#MultiVolume_Support|Multi Volume Support]]
+
* [[#Modules_by_category_Perk_Tutor|Perk Tutor]]
* [[#Perk_Tutor|Perk Tutor]]
+
* [[#Modules_by_category_Plastimatch|Plastimatch]]
* [[#Plastimatch|Plastimatch]]
+
** [[#Modules_by_category_Plastimatch_Registration|Registration]]
** [[#Registration|Registration]]
+
** [[#Modules_by_category_Plastimatch_Utilities|Utilities]]
** [[#Utilities|Utilities]]
+
* [[#Modules_by_category_Quantification|Quantification]]
* [[#Quantification|Quantification]]
+
** [[#Modules_by_category_Quantification_ChangeQuantification|Change Quantification]]
** [[#ChangeQuantification|Change Quantification]]
+
* [[#Modules_by_category_Radiotherapy|Radiotherapy]]
* [[#Radiotherapy|Radiotherapy]]
+
* [[#Modules_by_category_Registration|Registration]]
* [[#Registration|Registration]]
+
** [[#Modules_by_category_Registration_Specialized|Specialized]]
** [[#Specialized|Specialized]]
+
* [[#Modules_by_category_Segmentation|Segmentation]]
* [[#Segmentation|Segmentation]]
+
** [[#Modules_by_category_Segmentation_Specialized|Specialized]]
** [[#Specialized|Specialized]]
+
* [[#Modules_by_category_Shape_Analysis|Shape Analysis]]
* [[#Shape_Analysis|Shape Analysis]]
+
** [[#Modules_by_category_Shape_Analysis_CMF_Registration|CMF Registration]]
* [[#Slicelets|Slicelets]]
+
*** [[#Modules_by_category_CMF_Registration_Voxelbase_Registration|Voxelbase Registration]]
* [[#Surface_Models|Surface Models]]
+
* [[#Modules_by_category_Slicelets|Slicelets]]
* [[#Testing|Testing]]
+
* [[#Modules_by_category_Surface_Models|Surface Models]]
** [[#IGT_Tests|IGT Tests]]
+
* [[#Modules_by_category_Testing|Testing]]
** [[#SlicerRT_Tests|Slicer RT Tests]]
+
** [[#Modules_by_category_Testing_IGT_Tests|IGT Tests]]
** [[#TestCases|Test Cases]]
+
** [[#Modules_by_category_Testing_SlicerRT_Tests|Slicer RT Tests]]
* [[#Unspecified|Unspecified]]
+
** [[#Modules_by_category_Testing_TestCases|Test Cases]]
* [[#Utilities|Utilities]]
+
* [[#Modules_by_category_Unspecified|Unspecified]]
** [[#BRAINS|BRAINS]]
+
* [[#Modules_by_category_Utilities|Utilities]]
* [[#Vascular_Modeling_Toolkit|Vascular Modeling Toolkit]]
+
** [[#Modules_by_category_Utilities_BRAINS|BRAINS]]
* [[#Wizards|Wizards]]
+
* [[#Modules_by_category_Vascular_Modeling_Toolkit|Vascular Modeling Toolkit]]
* [[#Work_in_Progress|Work in Progress]]
+
* [[#Modules_by_category_Wizards|Wizards]]
** [[#Converters|Converters]]
+
* [[#Modules_by_category_Work_in_Progress|Work in Progress]]
** [[#Informatics|Informatics]]
+
** [[#Modules_by_category_Work_in_Progress_Converters|Converters]]
*** [[#TestCases|Test Cases]]
+
** [[#Modules_by_category_Work_in_Progress_Informatics|Informatics]]
* [[#XNATSlicer|XNATSlicer]]
+
*** [[#Modules_by_category_Informatics_TestCases|Test Cases]]
 +
<span id='Modules_by_category_BRAINS'></span>
 
== BRAINS ==
 
== BRAINS ==
 +
<span id='Modules_by_category_BRAINS_LabelStatistics'></span>
 
=== LabelStatistics ===
 
=== LabelStatistics ===
 
* BRAINSLabel Stats    <small>(cli, built-in)</small>
 
* BRAINSLabel Stats    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Cardiac_MRI_Toolkit'></span>
 
== Cardiac MRI Toolkit ==
 
== Cardiac MRI Toolkit ==
 +
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Connected Threshold Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Connected Threshold Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Isolated Connected Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Isolated Connected Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
+
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
 
* [[Documentation/4.4/Modules/ScarVisualization|Scar Visualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/ScarVisualization|Scar Visualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Boolean REMOVEFilter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Boolean REMOVEFilter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/LASegmentationWorkflow|LASegmentation Workflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/LASegmentationWorkflow|LASegmentation Workflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
== CMF Registration ==
+
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
* [[Documentation/4.4/Extensions/CMFreg|Apply Matrix]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
+
<span id='Modules_by_category_Converters'></span>
* [[Documentation/4.4/Modules/LandmarkRegistration|Landmark Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Extensions/CMFreg|Surface Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelExtraction|Label Extraction]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelAddition|Label Addition]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
=== Voxelbase Registration ===
 
* [[Documentation/4.4/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
 
== Converters ==
 
== Converters ==
 
* [[Documentation/4.4/Modules/VectorToScalarVolume|Vector To Scalar Volume]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/VectorToScalarVolume|Vector To Scalar Volume]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/CropVolume|Crop Volume]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/CropVolume|Crop Volume]]    <small>(loadable, built-in)</small>
 +
* [[Documentation/4.4/Modules/CreateDICOMSeries|Create DICOMSeries]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/OrientScalarVolume|Orient Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/OrientScalarVolume|Orient Scalar Volume]]    <small>(cli, built-in)</small>
* [[Documentation/4.4/Modules/CreateDICOMSeries|Create DICOMSeries]]    <small>(cli, built-in)</small>
+
<span id='Modules_by_category_Developer_Tools'></span>
 
== Developer Tools ==
 
== Developer Tools ==
 
* [[Documentation/4.4/Modules/EventBroker|Event Broker]]
 
* [[Documentation/4.4/Modules/EventBroker|Event Broker]]
 
* [[Documentation/4.4/Modules/ExecutionModelTour|Execution Model Tour]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ExecutionModelTour|Execution Model Tour]]    <small>(cli, built-in)</small>
 
* Double Arrays    <small>(loadable, built-in)</small>
 
* Double Arrays    <small>(loadable, built-in)</small>
* [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] extension)</small>
 
 
* [[Documentation/4.4/Modules/Cameras|Cameras]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Cameras|Cameras]]    <small>(loadable, built-in)</small>
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DeveloperToolsForExtensions Developer Tools For Extensions]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DeveloperToolsForExtensions Developer Tools For Extensions] extension)</small>
+
* [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/DeveloperToolsForExtensions Extension Stats]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/DeveloperToolsForExtensions Developer Tools For Extensions] extension)</small>
 +
* [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/DeveloperToolsForExtensions Developer Tools For Extensions]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/DeveloperToolsForExtensions Developer Tools For Extensions] extension)</small>
 
* [[Documentation/4.4/Modules/ExtensionWizard|Extension Wizard]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/ExtensionWizard|Extension Wizard]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Extensions/ImageMaker|Image Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ImageMaker|Image Maker]] extension)</small>
 
* [[Documentation/4.4/Extensions/ImageMaker|Image Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ImageMaker|Image Maker]] extension)</small>
 +
<span id='Modules_by_category_Developer_Tools_DICOM_Plugins'></span>
 
=== DICOM Plugins ===
 
=== DICOM Plugins ===
 
* DICOMLongitudinal PETCTPlugin
 
* DICOMLongitudinal PETCTPlugin
Line 346: Line 121:
 
* DICOMScalar Volume Plugin
 
* DICOMScalar Volume Plugin
 
* DICOMSlicer Data Bundle Plugin
 
* DICOMSlicer Data Bundle Plugin
 +
<span id='Modules_by_category_Developer_Tools_Editor_Extensions'></span>
 
=== Editor Extensions ===
 
=== Editor Extensions ===
 
* [[Documentation/4.4/Extensions/IASEM|Binary Watershed Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Binary Watershed Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Double Threshold Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Double Threshold Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Modules/PETTumorSegmentationEffect|PETTumor Segmentation Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]] extension)</small>
 
* [[Documentation/4.4/Modules/PETTumorSegmentationEffect|PETTumor Segmentation Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]] extension)</small>
 +
<span id='Modules_by_category_Developer_Tools_Matlab'></span>
 
=== Matlab ===
 
=== Matlab ===
 
* [[Documentation/4.4/Modules/MatlabCommander|Matlab Commander]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/4.4/Modules/MatlabCommander|Matlab Commander]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/4.4/Modules/MatlabModuleGenerator|Matlab Module Generator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/4.4/Modules/MatlabModuleGenerator|Matlab Module Generator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 +
<span id='Modules_by_category_Diffusion'></span>
 
== Diffusion ==
 
== Diffusion ==
 +
* DICOM2Full Brain Tractography    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/TractographyDisplay|Tractography Display]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/TractographyDisplay|Tractography Display]]    <small>(loadable, built-in)</small>
* DICOM2Full Brain Tractography    <small>(scripted, built-in)</small>
+
<span id='Modules_by_category_Diffusion_Diffusion_Data_Conversion'></span>
 
=== Diffusion Data Conversion ===
 
=== Diffusion Data Conversion ===
 
* DWIConvert    <small>(cli, built-in)</small>
 
* DWIConvert    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Diffusion_Diffusion_Tensor_Images'></span>
 
=== Diffusion Tensor Images ===
 
=== Diffusion Tensor Images ===
 
* [[Documentation/4.4/Modules/ResampleDTIVolume|Resample DTIVolume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ResampleDTIVolume|Resample DTIVolume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DiffusionTensorScalarMeasurements|Diffusion Tensor Scalar Measurements]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DiffusionTensorScalarMeasurements|Diffusion Tensor Scalar Measurements]]    <small>(cli, built-in)</small>
 +
* [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/ResampleDTIlogEuclidean Resample DTIlog Euclidean]    <small>(cli, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/ResampleDTIlogEuclidean Resample DTIlog Euclidean] extension)</small>
 
* [[Documentation/4.4/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]]    <small>(cli, built-in)</small>
 
* Tractography Interactive Seeding    <small>(loadable, built-in)</small>
 
* Tractography Interactive Seeding    <small>(loadable, built-in)</small>
 +
<span id='Modules_by_category_Diffusion_Diffusion_Weighted_Images'></span>
 
=== Diffusion Weighted Images ===
 
=== Diffusion Weighted Images ===
 
* [[Documentation/4.4/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ResampleScalarVectorDWIVolume|Resample Scalar Vector DWIVolume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ResampleScalarVectorDWIVolume|Resample Scalar Vector DWIVolume]]    <small>(cli, built-in)</small>
* [[Documentation/4.4/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]]    <small>(cli, built-in)</small>
 
 
* [[Documentation/4.4/Modules/DWIToDTIEstimation|DWITo DTIEstimation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIToDTIEstimation|DWITo DTIEstimation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 +
* [[Documentation/4.4/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/FinslerTractography|Finsler Tractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/FinslerTractography|Finsler Tractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]]    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Diffusion_FiberAnalysis'></span>
 
=== FiberAnalysis ===
 
=== FiberAnalysis ===
 +
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Fiber Compare]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Fiber Compare]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Merge Stat With Fiber]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Merge Stat With Fiber]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 +
<span id='Modules_by_category_Diffusion_Tractography'></span>
 
=== Tractography ===
 
=== Tractography ===
 
* [[Documentation/4.4/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]]    <small>(scripted, built-in)</small>
 +
* Fiber Bundle Label Select    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
* Fiber Bundle Label Select    <small>(cli, built-in)</small>
+
<span id='Modules_by_category_Editor_Effects'></span>
 
== Editor Effects ==
 
== Editor Effects ==
 
* [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small>
 
* [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small>
 +
<span id='Modules_by_category_EditorEffect'></span>
 
== EditorEffect ==
 
== EditorEffect ==
 
* [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]] extension)</small>
 
* [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]] extension)</small>
 +
<span id='Modules_by_category_Endoscopy'></span>
 
== Endoscopy ==
 
== Endoscopy ==
 
* [[Documentation/4.4/Modules/Endoscopy|Endoscopy]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/Endoscopy|Endoscopy]]    <small>(scripted, built-in)</small>
 +
<span id='Modules_by_category_Examples'></span>
 
== Examples ==
 
== Examples ==
* [[Documentation/4.4/Modules/FastGrowCut|Fast Grow Cut]]    <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small>
+
* [[Documentation/4.4/Modules/FastGrowCut|Fast Grow Cut]]    <small>(loadable, bundled in [https://www.slicer.org/wiki/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small>
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
+
* [http://wiki.slicer.org/wiki/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter]    <small>(loadable, bundled in [http://wiki.slicer.org/wiki/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
+
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
+
* [http://wiki.slicer.org/wiki/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]    <small>(loadable, bundled in [http://wiki.slicer.org/wiki/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 +
<span id='Modules_by_category_Exporter'></span>
 
== Exporter ==
 
== Exporter ==
 
* [[Documentation/4.4/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small>
 
* [[Documentation/4.4/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small>
 +
<span id='Modules_by_category_File'></span>
 
== File ==
 
== File ==
 
* [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 +
<span id='Modules_by_category_Filtering'></span>
 
== Filtering ==
 
== Filtering ==
 
* [[Documentation/4.4/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli, built-in)</small>
* [[Documentation/4.4/Modules/ThresholdScalarVolume|Threshold Scalar Volume]]    <small>(cli, built-in)</small>
 
 
* [[Documentation/4.4/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SimpleFilters|Simple Filters]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/SimpleFilters|Simple Filters]]    <small>(scripted, built-in)</small>
Line 404: Line 194:
 
* [[Documentation/4.4/Modules/HistogramMatching|Histogram Matching]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/HistogramMatching|Histogram Matching]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/CheckerBoardFilter|Checker Board Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/CheckerBoardFilter|Checker Board Filter]]    <small>(cli, built-in)</small>
 +
* [[Documentation/4.4/Modules/ThresholdScalarVolume|Threshold Scalar Volume]]    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Filtering_Arithmetic'></span>
 
=== Arithmetic ===
 
=== Arithmetic ===
 
* [[Documentation/4.4/Modules/MultiplyScalarVolumes|Multiply Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiplyScalarVolumes|Multiply Scalar Volumes]]    <small>(cli, built-in)</small>
Line 410: Line 202:
 
* [[Documentation/4.4/Modules/SubtractScalarVolumes|Subtract Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SubtractScalarVolumes|Subtract Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MaskScalarVolume|Mask Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MaskScalarVolume|Mask Scalar Volume]]    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Filtering_Denoising'></span>
 
=== Denoising ===
 
=== Denoising ===
 
* [[Documentation/4.4/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]]    <small>(cli, built-in)</small>
Line 415: Line 208:
 
* [[Documentation/4.4/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Filtering_Morphology'></span>
 
=== Morphology ===
 
=== Morphology ===
 
* [[Documentation/4.4/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Label]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Label]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
 +
* [[Documentation/4.4/Modules/GrayscaleGrindPeakImageFilter|Grayscale Grind Peak Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Dilate Label]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Dilate Label]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
* [[Documentation/4.4/Modules/GrayscaleGrindPeakImageFilter|Grayscale Grind Peak Image Filter]]    <small>(cli, built-in)</small>
+
<span id='Modules_by_category_IGT'></span>
 
== IGT ==
 
== IGT ==
 
* [[Documentation/4.4/Modules/ResectionVolume|Resection Volume]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ResectionPlanner|Resection Planner]] extension)</small>
 
* [[Documentation/4.4/Modules/ResectionVolume|Resection Volume]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ResectionPlanner|Resection Planner]] extension)</small>
Line 444: Line 239:
 
* [[Documentation/4.4/Extensions/SlicerIGT|Pivot Calibration]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Pivot Calibration]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
* [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 +
<span id='Modules_by_category_Informatics'></span>
 
== Informatics ==
 
== Informatics ==
 
* [[Documentation/4.4/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
Line 455: Line 251:
 
* [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]] extension)</small>
 
* [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]] extension)</small>
 
* [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] extension)</small>
 
* [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] extension)</small>
 +
<span id='Modules_by_category_Legacy'></span>
 
== Legacy ==
 
== Legacy ==
 +
<span id='Modules_by_category_Legacy_Converters'></span>
 
=== Converters ===
 
=== Converters ===
 
* [[Documentation/4.4/Modules/BSplineToDeformationField|BSpline To Deformation Field]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/BSplineToDeformationField|BSpline To Deformation Field]]    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Legacy_Diffusion'></span>
 
=== Diffusion ===
 
=== Diffusion ===
 +
<span id='Modules_by_category_Diffusion_Denoising'></span>
 
==== Denoising ====
 
==== Denoising ====
 
* [[Documentation/4.4/Modules/DWIUnbiasedNonLocalMeansFilter|DWIUnbiased Non Local Means Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIUnbiasedNonLocalMeansFilter|DWIUnbiased Non Local Means Filter]]    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Diffusion_Diffusion_Data_Conversion'></span>
 
==== Diffusion Data Conversion ====
 
==== Diffusion Data Conversion ====
 
* DTIimport    <small>(cli, built-in)</small>
 
* DTIimport    <small>(cli, built-in)</small>
 
* DTIexport    <small>(cli, built-in)</small>
 
* DTIexport    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Legacy_Filtering'></span>
 
=== Filtering ===
 
=== Filtering ===
 
* [[Documentation/4.4/Modules/OtsuThresholdImageFilter|Otsu Threshold Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/OtsuThresholdImageFilter|Otsu Threshold Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ResampleScalarVolume|Resample Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ResampleScalarVolume|Resample Scalar Volume]]    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Legacy_Registration'></span>
 
=== Registration ===
 
=== Registration ===
 
* Test Grid Transform Registration    <small>(cli, built-in)</small>
 
* Test Grid Transform Registration    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ExpertAutomatedRegistration|Expert Automated Registration]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ExpertAutomatedRegistration|Expert Automated Registration]]    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Legacy_Work_in_Progress'></span>
 
=== Work in Progress ===
 
=== Work in Progress ===
 +
<span id='Modules_by_category_Work_in_Progress_Diffusion_Tensor'></span>
 
==== Diffusion Tensor ====
 
==== Diffusion Tensor ====
 +
<span id='Modules_by_category_Diffusion_Tensor_Test'></span>
 
===== Test =====
 
===== Test =====
 
* Diffusion Tensor Test    <small>(cli, built-in)</small>
 
* Diffusion Tensor Test    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Margin_Calculator'></span>
 +
== Margin Calculator ==
 +
* [[Documentation/4.4/Extensions/MarginCalculator|Synthetic RTDose]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
 +
* [[Documentation/4.4/Extensions/MarginCalculator|Motion Simulator Double Array]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
 +
* [[Documentation/4.4/Extensions/MarginCalculator|Dose Morphology]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
 +
* [[Documentation/4.4/Extensions/MarginCalculator|Margin Calculator]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
 +
* [[Documentation/4.4/Extensions/MarginCalculator|Dose Population Histogram]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
 +
* [[Documentation/4.4/Extensions/MarginCalculator|Motion Simulator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
 +
<span id='Modules_by_category_Mesh_Generation'></span>
 
== Mesh Generation ==
 
== Mesh Generation ==
 
* [[Documentation/4.4/Extensions/CleaverExtension|Cleaver CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]] extension)</small>
 
* [[Documentation/4.4/Extensions/CleaverExtension|Cleaver CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]] extension)</small>
 +
<span id='Modules_by_category_MeshGeneration'></span>
 
== MeshGeneration ==
 
== MeshGeneration ==
 
* [[Documentation/4.4/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Modules/MeshCompression|Mesh Compression]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Modules/MeshCompression|Mesh Compression]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 +
<span id='Modules_by_category_Microscopy'></span>
 
== Microscopy ==
 
== Microscopy ==
 
* [[Documentation/4.4/Extensions/IASEM|Bin Shrink]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Bin Shrink]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Label Object Statistics]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Label Object Statistics]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Spacing Aware Curvature Diffusion]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Spacing Aware Curvature Diffusion]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 +
* [[Documentation/4.4/Extensions/IASEM|IASEMImport Series]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|IASEMImport]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|IASEMImport]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
* [[Documentation/4.4/Extensions/IASEM|IASEMImport Series]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
+
<span id='Modules_by_category_Multidimensional_data'></span>
 
== Multidimensional data ==
 
== Multidimensional data ==
 
* [[Documentation/4.4/Extensions/MultidimData|Metafile Importer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Metafile Importer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequence Browser]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequence Browser]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequences]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequences]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 +
<span id='Modules_by_category_MultiVolume_Support'></span>
 
== MultiVolume Support ==
 
== MultiVolume Support ==
 
* [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
 +
<span id='Modules_by_category_Perk_Tutor'></span>
 
== Perk Tutor ==
 
== Perk Tutor ==
 
* [[Documentation/4.4/Extensions/PerkTutor|Python Metrics Calculator]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Extensions/PerkTutor|Python Metrics Calculator]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
Line 497: Line 317:
 
* [[Documentation/4.4/Modules/TransformRecorder|Transform Recorder]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Modules/TransformRecorder|Transform Recorder]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Modules/PerkEvaluator|Perk Evaluator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Modules/PerkEvaluator|Perk Evaluator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 +
<span id='Modules_by_category_Plastimatch'></span>
 
== Plastimatch ==
 
== Plastimatch ==
 
* [[Documentation/4.4/Modules/DicomSroExport|Dicom Sro Export]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomSroExport|Dicom Sro Export]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Plm Register]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Plm Register]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 +
<span id='Modules_by_category_Plastimatch_Registration'></span>
 
=== Registration ===
 
=== Registration ===
 
* [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer bspline]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer bspline]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer landwarp]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer landwarp]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 +
<span id='Modules_by_category_Plastimatch_Utilities'></span>
 
=== Utilities ===
 
=== Utilities ===
 
* [[Documentation/4.4/Extensions/SlicerRT|Plastimatch Py]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Plastimatch Py]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 +
<span id='Modules_by_category_Quantification'></span>
 
== Quantification ==
 
== Quantification ==
* [[Documentation/4.4/Extensions/PET-IndiC|Quantitative Indices CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
+
* [[Documentation/4.4/Modules/dPetBrainQuantification|d Pet Brain Quantification]]    <small>(scripted, bundled in [http://gti-fing.github.io/SlicerPetSpectAnalysis Pet Spect Analysis] extension)</small>
 +
* [[Documentation/4.4/Modules/QuantitativeIndicesCLI|Quantitative Indices CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]]    <small>(cli, built-in)</small>
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
+
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
* [[Documentation/4.4/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
* [[Documentation/4.4/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
* [[Documentation/4.4/Extensions/PET-IndiC|PETIndi C]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Extensions/PET-IndiC|PETIndi C]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small>
 
* [[Documentation/4.4/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small>
 +
* [[Documentation/4.4/Extensions/PET-IndiC|Quantitative Indices Tool]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Modules/HeterogeneityCAD|Heterogeneity CAD]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small>
 
* [[Documentation/4.4/Modules/HeterogeneityCAD|Heterogeneity CAD]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small>
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/4.4/Modules/DiceComputation|Dice Computation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]] extension)</small>
 
* [[Documentation/4.4/Modules/DiceComputation|Dice Computation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]] extension)</small>
 
* [[Documentation/4.4/Modules/DataProbe|Data Probe]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/DataProbe|Data Probe]]    <small>(scripted, built-in)</small>
* [[Documentation/4.4/Extensions/PET-IndiC|Quantitative Indices Tool]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
+
<span id='Modules_by_category_Quantification_ChangeQuantification'></span>
 
=== ChangeQuantification ===
 
=== ChangeQuantification ===
 
* [[Documentation/4.4/Modules/IntensityDifferenceMetric|Intensity Difference Metric]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
* [[Documentation/4.4/Modules/IntensityDifferenceMetric|Intensity Difference Metric]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 +
<span id='Modules_by_category_Radiotherapy'></span>
 
== Radiotherapy ==
 
== Radiotherapy ==
 
* [[Documentation/4.4/Modules/ContourComparison|Contour Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ContourComparison|Contour Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
Line 530: Line 357:
 
* [[Documentation/4.4/Modules/DoseComparison|Dose Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseComparison|Dose Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ContourMorphology|Contour Morphology]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ContourMorphology|Contour Morphology]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
* [[Documentation/4.4/Extensions/SlicerRT|Planar Image]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
 
* [[Documentation/4.4/Modules/DicomSroImport|Dicom Sro Import]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomSroImport|Dicom Sro Import]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseVolumeHistogram|Dose Volume Histogram]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseVolumeHistogram|Dose Volume Histogram]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 +
* [[Documentation/4.4/Extensions/SlicerRT|Planar Image]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 +
<span id='Modules_by_category_Registration'></span>
 
== Registration ==
 
== Registration ==
 
* [[Documentation/4.4/Modules/BRAINSResample|BRAINSResample]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/BRAINSResample|BRAINSResample]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
* BRAINSResize    <small>(cli, built-in)</small>
 
* BRAINSResize    <small>(cli, built-in)</small>
 +
* [[Documentation/4.4/Modules/LandmarkRegistration|Landmark Registration]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/BRAINSFit|BRAINSFit]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/BRAINSFit|BRAINSFit]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small>
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small>
 
* Perform Metric Test    <small>(cli, built-in)</small>
 
* Perform Metric Test    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Registration_Specialized'></span>
 
=== Specialized ===
 
=== Specialized ===
 
* [[Documentation/4.4/Modules/ACPCTransform|ACPCTransform]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ACPCTransform|ACPCTransform]]    <small>(cli, built-in)</small>
Line 546: Line 376:
 
* [[Documentation/4.4/Modules/BRAINSDemonWarp|BRAINSDemon Warp]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/BRAINSDemonWarp|BRAINSDemon Warp]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Reformat|Reformat]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Reformat|Reformat]]    <small>(loadable, built-in)</small>
 +
<span id='Modules_by_category_Segmentation'></span>
 
== Segmentation ==
 
== Segmentation ==
 +
* [[Documentation/4.4/Modules/AirwaySegmentation|Airway Segmentation]]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation] extension)</small>
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Training]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Training]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
* [http://www.nitrc.org/projects/abc ABC]    <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small>
+
* [https://github.com/Tomnl/Slicer-Wasp Wasp]    <small>(scripted, bundled in [https://github.com/Tomnl/Slicer-Wasp Wasp] extension)</small>
 +
* [[Documentation/4.4/Modules/ABC|ABC]]    <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small>
 
* EMSegment Quick    <small>(loadable, built-in)</small>
 
* EMSegment Quick    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/SimpleRegionGrowingSegmentation|Simple Region Growing Segmentation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SimpleRegionGrowingSegmentation|Simple Region Growing Segmentation]]    <small>(cli, built-in)</small>
Line 561: Line 394:
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Testing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Testing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small>
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small>
 +
<span id='Modules_by_category_Segmentation_Specialized'></span>
 
=== Specialized ===
 
=== Specialized ===
 
* EMSegment Command Line    <small>(cli, built-in)</small>
 
* EMSegment Command Line    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli, built-in)</small>
 
* BRAINSROIAuto    <small>(cli, built-in)</small>
 
* BRAINSROIAuto    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Shape_Analysis'></span>
 
== Shape Analysis ==
 
== Shape Analysis ==
 
* [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]] extension)</small>
 
* [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]] extension)</small>
 +
* [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/AnglePlanes Angle Planes]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/AnglePlanes Angle Planes Extension] extension)</small>
 +
* [[Documentation/4.4/Extensions/ModelToModelDistance|Model To Model Distance]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ModelToModelDistance|Model To Model Distance]] extension)</small>
 +
* [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/MeshStatistics Mesh Statistics]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/MeshStatistics Mesh Statistics Extension] extension)</small>
 +
* [[Documentation/4.4/Extensions/EasyClip|Easy Clip]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/EasyClip|Easy Clip]] extension)</small>
 +
* [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/PickAndPaint Pick And Paint]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/PickAndPaint Pick And Paint Extension] extension)</small>
 +
* [[Documentation/4.4/Extensions/Q3DC|Q3DC]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Q3DC|Q3DC]] extension)</small>
 +
<span id='Modules_by_category_Shape_Analysis_CMF_Registration'></span>
 +
=== CMF Registration ===
 +
* [[Documentation/4.4/Extensions/CMFreg|Apply Matrix]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 +
* [[Documentation/4.4/Modules/SurfaceRegistration|Surface Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 +
* [[Documentation/4.4/Modules/LabelExtraction|Label Extraction]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 +
* [[Documentation/4.4/Modules/LabelAddition|Label Addition]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 +
* [[Documentation/4.4/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 +
<span id='Modules_by_category_CMF_Registration_Voxelbase_Registration'></span>
 +
==== Voxelbase Registration ====
 +
* [[Documentation/4.4/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 +
* [[Documentation/4.4/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 +
* [[Documentation/4.4/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 +
<span id='Modules_by_category_Slicelets'></span>
 
== Slicelets ==
 
== Slicelets ==
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
+
* [http://www.slicer.org/wiki/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo]    <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
+
* [http://www.slicer.org/wiki/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo]    <small>(loadable, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 +
<span id='Modules_by_category_Surface_Models'></span>
 
== Surface Models ==
 
== Surface Models ==
* [[Documentation/4.4/Modules/SurfaceToolbox|Surface Toolbox]]    <small>(scripted, built-in)</small>
 
 
* [[Documentation/4.4/Modules/ModelToLabelMap|Model To Label Map]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ModelToLabelMap|Model To Label Map]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MergeModels|Merge Models]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MergeModels|Merge Models]]    <small>(cli, built-in)</small>
 +
* [[Documentation/4.4/Modules/SurfaceToolbox|Surface Toolbox]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/ProbeVolumeWithModel|Probe Volume With Model]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ProbeVolumeWithModel|Probe Volume With Model]]    <small>(cli, built-in)</small>
 +
* [[Documentation/4.4/Modules/ModelMaker|Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleModelMaker|Grayscale Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleModelMaker|Grayscale Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/LabelMapSmoothing|Label Map Smoothing]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/LabelMapSmoothing|Label Map Smoothing]]    <small>(cli, built-in)</small>
* [[Documentation/4.4/Modules/ModelMaker|Model Maker]]    <small>(cli, built-in)</small>
+
<span id='Modules_by_category_Testing'></span>
 
== Testing ==
 
== Testing ==
 
* Self Tests
 
* Self Tests
Line 586: Line 442:
 
* Performance Tests
 
* Performance Tests
 
* Slicer MRBTest
 
* Slicer MRBTest
 +
<span id='Modules_by_category_Testing_IGT_Tests'></span>
 
=== IGT Tests ===
 
=== IGT Tests ===
 
* Breach Warning Self Test
 
* Breach Warning Self Test
 
* Watchdog Self Test
 
* Watchdog Self Test
 +
<span id='Modules_by_category_Testing_SlicerRT_Tests'></span>
 
=== SlicerRT Tests ===
 
=== SlicerRT Tests ===
 +
* NAMIC Tutorial 2013June Self Test
 
* Dicom Rt Import Self Test
 
* Dicom Rt Import Self Test
 
* [[Documentation/4.4/Extensions/SlicerRT|Batch Contour Conversion]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Batch Contour Conversion]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 +
<span id='Modules_by_category_Testing_TestCases'></span>
 
=== TestCases ===
 
=== TestCases ===
 
* Slice Link Logic    <small>(scripted, built-in)</small>
 
* Slice Link Logic    <small>(scripted, built-in)</small>
Line 600: Line 460:
 
* slicer Close Crash Bug2590
 
* slicer Close Crash Bug2590
 
* Subject Hierarchy Generic Self Test
 
* Subject Hierarchy Generic Self Test
* View Controllers Slice Interpolation Bug1926
+
* Scene Performance    <small>(scripted, built-in)</small>
 
* Charting    <small>(scripted, built-in)</small>
 
* Charting    <small>(scripted, built-in)</small>
* Scene Performance    <small>(scripted, built-in)</small>
 
 
* Neurosurgical Planning Tutorial Markups Self Test
 
* Neurosurgical Planning Tutorial Markups Self Test
 
* Markups In Compare Viewers Self Test
 
* Markups In Compare Viewers Self Test
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures]    <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] extension)</small>
+
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures]    <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures] extension)</small>
 
* fiber visibility crash2438
 
* fiber visibility crash2438
 
* scene Import2428
 
* scene Import2428
Line 617: Line 476:
 
* Change Tracker Self Test
 
* Change Tracker Self Test
 
* Fiducial Layout Switch Bug1914
 
* Fiducial Layout Switch Bug1914
 +
* View Controllers Slice Interpolation Bug1926
 
* Slicer4Minute    <small>(scripted, built-in)</small>
 
* Slicer4Minute    <small>(scripted, built-in)</small>
 
* label Toggle Bug2049
 
* label Toggle Bug2049
 +
<span id='Modules_by_category_Unspecified'></span>
 
== Unspecified ==
 
== Unspecified ==
 
* BRAINSDWICleanup    <small>(cli, built-in)</small>
 
* BRAINSDWICleanup    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Utilities'></span>
 
== Utilities ==
 
== Utilities ==
 
* [[Documentation/4.4/Modules/ThingiverseBrowser|Thingiverse Browser]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ThingiverseBrowser|Thingiverse Browser]] extension)</small>
 
* [[Documentation/4.4/Modules/ThingiverseBrowser|Thingiverse Browser]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ThingiverseBrowser|Thingiverse Browser]] extension)</small>
Line 626: Line 488:
 
* EMSegment Transform To New Format    <small>(cli, built-in)</small>
 
* EMSegment Transform To New Format    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DataStore|Data Store]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/DataStore|Data Store]]    <small>(loadable, built-in)</small>
 +
<span id='Modules_by_category_Utilities_BRAINS'></span>
 
=== BRAINS ===
 
=== BRAINS ===
 
* BRAINSTransform Convert    <small>(cli, built-in)</small>
 
* BRAINSTransform Convert    <small>(cli, built-in)</small>
 +
<span id='Modules_by_category_Vascular_Modeling_Toolkit'></span>
 
== Vascular Modeling Toolkit ==
 
== Vascular Modeling Toolkit ==
 
* [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [http://slicer.vmtk.org/ Centerline Computation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [http://slicer.vmtk.org/ Centerline Computation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 +
<span id='Modules_by_category_Wizards'></span>
 
== Wizards ==
 
== Wizards ==
* [[Documentation/4.4/Modules/CompareVolumes|Compare Volumes]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
+
* [[Documentation/4.4/Modules/CompareVolumes|Compare Volumes]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/ChangeTracker|Change Tracker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
* [[Documentation/4.4/Modules/ChangeTracker|Change Tracker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 +
<span id='Modules_by_category_Work_in_Progress'></span>
 
== Work in Progress ==
 
== Work in Progress ==
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 +
<span id='Modules_by_category_Work_in_Progress_Converters'></span>
 
=== Converters ===
 
=== Converters ===
 
* [[Documentation/4.4/Extensions/Reporting|Label To DICOMSEGConverter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 
* [[Documentation/4.4/Extensions/Reporting|Label To DICOMSEGConverter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 +
<span id='Modules_by_category_Work_in_Progress_Informatics'></span>
 
=== Informatics ===
 
=== Informatics ===
 
* [[Documentation/4.4/Extensions/Reporting|Reporting]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 
* [[Documentation/4.4/Extensions/Reporting|Reporting]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 +
<span id='Modules_by_category_Informatics_TestCases'></span>
 
==== TestCases ====
 
==== TestCases ====
 
* Reporting Self Test
 
* Reporting Self Test
 
* Label To DICOMSEGConverter Self Test
 
* Label To DICOMSEGConverter Self Test
== XNATSlicer ==
+
= Modules by name =
* [[Documentation/4.4/Extensions/XNATSlicer|Xnat Slicer]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] extension)</small>
+
233 modules:
= Modules by contributing organization =
+
* [[Documentation/4.4/Modules/ABC|ABC]]    <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small>
73 contributing organizations:
+
* [[Documentation/4.4/Modules/ACPCTransform|ACPCTransform]]    <small>(cli, built-in)</small>
* [[#Asclepios_INRIA|Asclepios INRIA]]
 
* [[#AZE_R_D|AZE R&D]]
 
* [[#Boston_Children_s_Hospital|Boston Children's Hospital]]
 
* [[#Brigham_and_Women_s_Hospital|Brigham and Women's Hospital]]
 
* [[#BWH|BWH]]
 
* [[#BWH.2C_SPL|BWH, SPL]]
 
* [[#BWH.2C_SUMS|BWH, SUMS]]
 
* [[#BWH.2FUAB|BWH/UAB]]
 
* [[#CARMA|CARMA]]
 
* [[#College_of_Information_Engineering.2C_Zhejiang_University_of_Technology.2C_Hangzhou.2C_China.29.3B_Xiaolei_Chen.2C_Jiashu_Zhang.28Department_of_Neurosurgery.2C_PLA_General_Hospital.2C_Beijing.2C_China|College of Information Engineering, Zhejiang University of Technology, Hangzhou, China);  Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China]]
 
* [[#CRTC|CRTC]]
 
* [[#gatech|gatech]]
 
* [[#GE|GE]]
 
* [[#Georgia_Tech|Georgia Tech]]
 
* [[#IBM|IBM]]
 
* [[#Isomics|Isomics]]
 
* [[#Isomics_Inc.|Isomics Inc.]]
 
* [[#Isomics.2C_pieper.40isomics.com|Isomics, pieper@isomics.com]]
 
* [[#Kingston_General_Hospital|Kingston General Hospital]]
 
* [[#Kitware|Kitware]]
 
* [[#Kitware.29|Kitware)]]
 
* [[#MGH|MGH]]
 
* [[#MGH.2C_Boston|MGH, Boston]]
 
* [[#Moka_Creative.2C_LLC.2C_kumar.sunil.p.40gmail.com|Moka Creative, LLC, kumar.sunil.p@gmail.com]]
 
* [[#MSC.2FNLM|MSC/NLM]]
 
* [[#Noware|Noware]]
 
* [[#Orobix|Orobix]]
 
* [[#PerkLab_at_Queen_s_University|Perk Lab at Queen's University]]
 
* [[#PerkLab.2C_Queen_s|Perk Lab, Queen's]]
 
* [[#PerkLab.2C_Queen_s_Universit|Perk Lab, Queen's Universit]]
 
* [[#PerkLab.2C_Queen_s_University|Perk Lab, Queen's University]]
 
* [[#PMH|PMH]]
 
* [[#PMH.2C_Toronto|PMH, Toronto]]
 
* [[#Princess_Margaret_Cancer_Centre|Princess Margaret Cancer Centre]]
 
* [[#Queen_s|Queen's]]
 
* [[#Queen_s_Universit|Queen's Universit]]
 
* [[#Queen_s_University|Queen's University]]
 
* [[#Queen_s_University.29_Jaime_Garcia-Guevara_.28Queen_s_University|Queen's University) Jaime Garcia-Guevara (Queen's University]]
 
* [[#Radiation_Medicine_Program.2C_Princess_Margaret_Hospital.2C_University_Health_Network_Toronto|Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto]]
 
* [[#RMP.2C_PMH|RMP, PMH]]
 
* [[#SAIC-Frederick.2C_NCI-Frederick|SAIC-Frederick, NCI-Frederick]]
 
* [[#SBU|SBU]]
 
* [[#SCI_Institute|SCI Institute]]
 
* [[#Shiga_University_of_Medical_Science|Shiga University of Medical Science]]
 
* [[#Shiga_University_of_Medical_Science_in_Japan|Shiga University of Medical Science in Japan]]
 
* [[#Shiga_University_of_Medical_Science.2C_Japan.2C_SPL|Shiga University of Medical Science, Japan, SPL]]
 
* [[#SINAPSE|SINAPSE]]
 
* [[#SNR|SNR]]
 
* [[#SPL|SPL]]
 
* [[#SPL_B_W_Harvard|SPL B&W Harvard]]
 
* [[#SPL.2C_BWH|SPL, BWH]]
 
* [[#SPL.2C_BWH.2C_UPenn|SPL, BWH, UPenn]]
 
* [[#SUMS|SUMS]]
 
* [[#Surgical_Planning_Lab|Surgical Planning Lab]]
 
* [[#UAB|UAB]]
 
* [[#UHN.2C_Toronto|UHN, Toronto]]
 
* [[#Uiowa|Uiowa]]
 
* [[#UIowa|UIowa]]
 
* [[#UNC|UNC]]
 
* [[#Univ_of_Michigan|Univ of Michigan]]
 
* [[#Univ._of_Iowa|Univ. of Iowa]]
 
* [[#University__Magna_Graecia__of_Catanzaro|University 'Magna Graecia' of Catanzaro]]
 
* [[#University_College_Cork|University College Cork]]
 
* [[#University_of_Heidelberg|University of Heidelberg]]
 
* [[#University_of_Iowa|University of Iowa]]
 
* [[#University_of_Iowa.29_and_Andrey_Fedorov_.28SPL|University of Iowa) and Andrey Fedorov (SPL]]
 
* [[#UPenn|UPenn]]
 
* [[#Utah|Utah]]
 
* [[#UVa|UVa]]
 
* [[#UWA|UWA]]
 
* [[#WashU-St._Louis.2C_dmarcus.40wustl.edu|Wash U-St. Louis, dmarcus@wustl.edu]]
 
* [[#while_at_GE|while at GE]]
 
== Asclepios INRIA ==
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small>
 
== AZE R&D ==
 
* JRC2013Vis
 
== Boston Children's Hospital ==
 
* [http://slicer.vmtk.org/ Centerline Computation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
== Brigham and Women's Hospital ==
 
* [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
* [[Documentation/4.4/Modules/SurfaceToolbox|Surface Toolbox]]    <small>(scripted, built-in)</small>
 
* test tractography display
 
* [[Documentation/4.4/Modules/VolumeResliceDriver|Volume Reslice Driver]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
== BWH ==
 
* Add Many Markups Fiducial Test
 
* Change Tracker Self Test
 
* Colors Scalar Bar Self Test
 
* [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]] extension)</small>
 
* [[Documentation/4.4/Modules/DiceComputation|Dice Computation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]] extension)</small>
 
* [[Documentation/4.4/Modules/DICOMRWVMPlugin|DICOMRWVMPlugin]]
 
* Fiducial Layout Switch Bug1914
 
* [[Documentation/4.4/Modules/HeterogeneityCAD|Heterogeneity CAD]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small>
 
* [[Documentation/4.4/Modules/Markups|Markups]]    <small>(loadable, built-in)</small>
 
* Markups In Compare Viewers Self Test
 
* Markups In Views Self Test
 
* Neurosurgical Planning Tutorial Markups Self Test
 
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
* [[Documentation/4.4/Modules/SegmentCAD|Segment CAD]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small>
 
* Volume Rendering Scene Close    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small>
 
== BWH, SPL ==
 
* [[Documentation/4.4/Modules/CropVolume|Crop Volume]]    <small>(loadable, built-in)</small>
 
== BWH, SUMS ==
 
* [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
== BWH/UAB ==
 
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
== CARMA ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Boolean REMOVEFilter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Connected Threshold Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Isolated Connected Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/LASegmentationWorkflow|LASegmentation Workflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/ScarVisualization|Scar Visualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
== College of Information Engineering, Zhejiang University of Technology, Hangzhou, China);  Xiaolei Chen, Jiashu Zhang(Department of Neurosurgery, PLA General Hospital, Beijing, China ==
 
* [[Documentation/4.4/Modules/GyroGuide|Gyro Guide]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]] extension)</small>
 
== CRTC ==
 
* [[Documentation/4.4/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Modules/MeshCompression|Mesh Compression]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small>
 
== gatech ==
 
* [[Documentation/4.4/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli, built-in)</small>
 
== GE ==
 
 
* [[Documentation/4.4/Modules/AddScalarVolumes|Add Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/AddScalarVolumes|Add Scalar Volumes]]    <small>(cli, built-in)</small>
* Charting    <small>(scripted, built-in)</small>
+
* [[Documentation/4.4/Modules/AirwaySegmentation|Airway Segmentation]]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/AirwaySegmentation Airway Segmentation] extension)</small>
* [[Documentation/4.4/Modules/CheckerBoardFilter|Checker Board Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/CreateDICOMSeries|Create DICOMSeries]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
* Diffusion Tensor Test    <small>(cli, built-in)</small>
 
* DWIConvert    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ExecutionModelTour|Execution Model Tour]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleGrindPeakImageFilter|Grayscale Grind Peak Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleModelMaker|Grayscale Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/HistogramMatching|Histogram Matching]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/LabelMapSmoothing|Label Map Smoothing]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MedianImageFilter|Median Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ModelMaker|Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ModelToLabelMap|Model To Label Map]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiplyScalarVolumes|Multiply Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/OrientScalarVolume|Orient Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/OtsuThresholdImageFilter|Otsu Threshold Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small>
 
* [[Documentation/4.4/Modules/ResampleScalarVolume|Resample Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SimpleRegionGrowingSegmentation|Simple Region Growing Segmentation]]    <small>(cli, built-in)</small>
 
* Slice Link Logic    <small>(scripted, built-in)</small>
 
* Slicer4Minute    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Spacing Aware Curvature Diffusion]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Modules/SubtractScalarVolumes|Subtract Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 
* View Controllers Slice Interpolation Bug1926
 
* [[Documentation/4.4/Modules/VotingBinaryHoleFillingImageFilter|Voting Binary Hole Filling Image Filter]]    <small>(cli, built-in)</small>
 
== Georgia Tech ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
== IBM ==
 
* [[Documentation/4.4/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 
== Isomics ==
 
* Atlas Tests
 
* [[Documentation/4.4/Extensions/IASEM|Binary Watershed Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [http://slicer.vmtk.org/ Centerline Computation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/4.4/Modules/CompareVolumes|Compare Volumes]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/Data|Data]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/DataProbe|Data Probe]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/DICOM|DICOM]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/Endoscopy|Endoscopy]]    <small>(scripted, built-in)</small>
 
* fiber visibility crash2438
 
* [[Documentation/4.4/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]]    <small>(scripted, built-in)</small>
 
* label Toggle Bug2049
 
* [[Documentation/4.4/Modules/LandmarkRegistration|Landmark Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/4.4/Modules/Models|Models]]    <small>(loadable, built-in)</small>
 
* Performance Tests
 
* [[Documentation/4.4/Modules/PETTumorSegmentationEffect|PETTumor Segmentation Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]] extension)</small>
 
* [[Documentation/4.4/Extensions/Reporting|Reporting]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 
* RSNA2012Prostate Demo
 
* RSNAQuant Tutorial
 
* RSNAVis Tutorial
 
* [[Documentation/4.4/Modules/SampleData|Sample Data]]    <small>(scripted, built-in)</small>
 
* scene Import2428
 
* Self Tests
 
* [[Documentation/4.4/Modules/SimpleFilters|Simple Filters]]    <small>(scripted, built-in)</small>
 
* slicer Close Crash Bug2590
 
* [[Documentation/4.4/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small>
 
* Tractography Interactive Seeding    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/VectorToScalarVolume|Vector To Scalar Volume]]    <small>(scripted, built-in)</small>
 
* [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/4.4/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Volumes|Volumes]]    <small>(loadable, built-in)</small>
 
== Isomics Inc. ==
 
* DICOMDiffusion Volume Plugin
 
* DICOMLongitudinal PETCTPlugin
 
* DICOMScalar Volume Plugin
 
* DICOMSlicer Data Bundle Plugin
 
* Slicer MRBTest
 
* Threshold Threading Test
 
== Isomics, pieper@isomics.com ==
 
* [[Documentation/4.4/Extensions/XNATSlicer|Xnat Slicer]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] extension)</small>
 
== Kingston General Hospital ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
== Kitware ==
 
* [[Documentation/4.4/Modules/Cameras|Cameras]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Colors|Colors]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Data|Data]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/DataStore|Data Store]]    <small>(loadable, built-in)</small>
 
* Double Arrays    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/EventBroker|Event Broker]]
 
* [[Documentation/4.4/Modules/ExpertAutomatedRegistration|Expert Automated Registration]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ExtensionWizard|Extension Wizard]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/FastGrowCut|Fast Grow Cut]]    <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small>
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
* fiber visibility crash2438
 
* [[Documentation/4.4/Modules/FiducialRegistration|Fiducial Registration]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/ImageMaker|Image Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ImageMaker|Image Maker]] extension)</small>
 
* label Toggle Bug2049
 
* [[Documentation/4.4/Modules/MatlabCommander|Matlab Commander]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/4.4/Modules/MatlabModuleGenerator|Matlab Module Generator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/4.4/Modules/Models|Models]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/PortPlacement|Port Placement]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PortPlacement|Port Placement]] extension)</small>
 
* [[Documentation/4.4/Modules/Reformat|Reformat]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/SampleData|Sample Data]]    <small>(scripted, built-in)</small>
 
* Scene Performance    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/SimpleFilters|Simple Filters]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small>
 
* [[Documentation/4.4/Modules/ThresholdScalarVolume|Threshold Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/TractographyDisplay|Tractography Display]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Units|Units]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Volumes|Volumes]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Welcome|Welcome]]    <small>(loadable, built-in)</small>
 
== Kitware) ==
 
* [[Documentation/4.4/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/FinslerTractography|Finsler Tractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
== MGH ==
 
* [[Documentation/4.4/Modules/DicomSroExport|Dicom Sro Export]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Plm Register]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== MGH, Boston ==
 
* [[Documentation/4.4/Modules/DicomRtExport|Dicom Rt Export]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== Moka Creative, LLC, kumar.sunil.p@gmail.com ==
 
* [[Documentation/4.4/Extensions/XNATSlicer|Xnat Slicer]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] extension)</small>
 
== MSC/NLM ==
 
* [[Documentation/4.4/Extensions/IASEM|Label Object Statistics]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Modules/SimpleFilters|Simple Filters]]    <small>(scripted, built-in)</small>
 
== Noware ==
 
* [[Documentation/4.4/Modules/SwissSkullStripper|Swiss Skull Stripper]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]] extension)</small>
 
== Orobix ==
 
* [http://slicer.vmtk.org/ Centerline Computation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/4.4/Modules/SurfaceToolbox|Surface Toolbox]]    <small>(scripted, built-in)</small>
 
* [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
== PerkLab at Queen's University ==
 
* [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] extension)</small>
 
== PerkLab, Queen's ==
 
* [[Documentation/4.4/Extensions/MultidimData|Metafile Importer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequence Browser]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequences]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
== PerkLab, Queen's Universit ==
 
* [[Documentation/4.4/Extensions/SlicerIGT|Model Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
== PerkLab, Queen's University ==
 
* [[Documentation/4.4/Modules/MatlabCommander|Matlab Commander]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/4.4/Modules/MatlabModuleGenerator|Matlab Module Generator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/4.4/Modules/PlusRemote|Plus Remote]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Model]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small>
 
== PMH ==
 
* Colors Scalar Bar Self Test
 
* [[Documentation/4.4/Extensions/MultidimData|Sequence Browser]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequences]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
== PMH, Toronto ==
 
* [[Documentation/4.4/Modules/DicomRtExport|Dicom Rt Export]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Isodose|Isodose]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== Princess Margaret Cancer Centre ==
 
* [[Documentation/4.4/Modules/DicomSroExport|Dicom Sro Export]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomSroImport|Dicom Sro Import]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== Queen's ==
 
* [[Documentation/4.4/Extensions/SlicerRT|Batch Contour Conversion]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Beams]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ContourComparison|Contour Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ContourMorphology|Contour Morphology]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Contours|Contours]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Data|Data]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/DicomRtExport|Dicom Rt Export]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomRtImport|Dicom Rt Import]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* Dicom Rt Import Self Test
 
* [[Documentation/4.4/Modules/DoseAccumulation|Dose Accumulation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseComparison|Dose Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseVolumeHistogram|Dose Volume Histogram]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo]    <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
* [[Documentation/4.4/Modules/Isodose|Isodose]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Planar Image]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/SubjectHierarchy|Subject Hierarchy]]    <small>(loadable, built-in)</small>
 
* Subject Hierarchy Core Plugins Self Test
 
* Subject Hierarchy Generic Self Test
 
* [[Documentation/4.4/Extensions/SlicerRT|Vff File Reader]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== Queen's Universit ==
 
* [[Documentation/4.4/Extensions/SlicerIGT|Fiducials To Model Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
== Queen's University ==
 
* [[Documentation/4.4/Extensions/SlicerIGT|Breach Warning]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/CollectFiducials|Collect Fiducials]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Create Models]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Dvh Comparison]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Fiducial Registration Wizard]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
* [[Documentation/4.4/Modules/OpenIGTLinkRemote|Open IGTLink Remote]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/PerkEvaluator|Perk Evaluator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Pivot Calibration]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/PerkTutor|Python Metrics Calculator]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Modules/ResectionVolume|Resection Volume]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ResectionPlanner|Resection Planner]] extension)</small>
 
* [[Documentation/4.4/Extensions/Scoliosis|Scoliosis Monitoring]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
* [[Documentation/4.4/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Transform Fusion]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/TransformRecorder|Transform Recorder]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Ultrasound Snapshots]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Roi]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small>
 
* [[Documentation/4.4/Modules/VolumeResliceDriver|Volume Reslice Driver]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Watchdog]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/WorkflowSegmentation|Workflow Segmentation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
== Queen's University) Jaime Garcia-Guevara (Queen's University ==
 
* Breach Warning Self Test
 
* Watchdog Self Test
 
== Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto ==
 
* [[Documentation/4.4/Modules/MatlabCommander|Matlab Commander]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/4.4/Modules/MatlabModuleGenerator|Matlab Module Generator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
== RMP, PMH ==
 
* Dicom Sro Import Plugin
 
== SAIC-Frederick, NCI-Frederick ==
 
* [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
 
== SBU ==
 
* [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
== SCI Institute ==
 
* [[Documentation/4.4/Extensions/CleaverExtension|Cleaver CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]] extension)</small>
 
== Shiga University of Medical Science ==
 
* [[Documentation/4.4/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small>
 
== Shiga University of Medical Science in Japan ==
 
* [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
== Shiga University of Medical Science, Japan, SPL ==
 
* [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small>
 
== SINAPSE ==
 
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures]    <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] extension)</small>
 
== SNR ==
 
* [[Documentation/4.4/Modules/PathExplorer|Path Explorer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/TrackerStabilizer|Tracker Stabilizer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small>
 
== SPL ==
 
* DICOM2Full Brain Tractography    <small>(scripted, built-in)</small>
 
* Label To DICOMSEGConverter Self Test
 
* [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small>
 
* [[Documentation/4.4/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small>
 
* [[Documentation/4.4/Extensions/PET-IndiC|Quantitative Indices CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Extensions/PET-IndiC|Quantitative Indices Tool]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* Reporting Self Test
 
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
* [[Documentation/4.4/Modules/TrackerStabilizer|Tracker Stabilizer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small>
 
== SPL B&W Harvard ==
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small>
 
== SPL, BWH ==
 
* [[Documentation/4.4/Modules/ACPCTransform|ACPCTransform]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/BSplineToDeformationField|BSpline To Deformation Field]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/CastScalarVolume|Cast Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Colors|Colors]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Data|Data]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/DiffusionTensorScalarMeasurements|Diffusion Tensor Scalar Measurements]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]]    <small>(cli, built-in)</small>
 
* DTIexport    <small>(cli, built-in)</small>
 
* DTIimport    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIToDTIEstimation|DWITo DTIEstimation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/FiducialRegistration|Fiducial Registration]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleModelMaker|Grayscale Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ImageLabelCombine|Image Label Combine]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MaskScalarVolume|Mask Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MergeModels|Merge Models]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ModelMaker|Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Models|Models]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/ModelToLabelMap|Model To Label Map]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/4.4/Modules/ProbeVolumeWithModel|Probe Volume With Model]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/Reporting|Reporting]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 
* [[Documentation/4.4/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SceneViews|Scene Views]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
* [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] extension)</small>
 
* Test Grid Transform Registration    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ThresholdScalarVolume|Threshold Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Volumes|Volumes]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Welcome|Welcome]]    <small>(loadable, built-in)</small>
 
== SPL, BWH, UPenn ==
 
* [[Documentation/4.4/Modules/MergeModels|Merge Models]]    <small>(cli, built-in)</small>
 
== SUMS ==
 
* [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
== Surgical Planning Lab ==
 
* [[Documentation/4.4/Extensions/Reporting|Label To DICOMSEGConverter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 
== UAB ==
 
* [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
* [[Documentation/4.4/Modules/SobolevSegmenter|Sobolev Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]] extension)</small>
 
== UHN, Toronto ==
 
* [[Documentation/4.4/Modules/ContourComparison|Contour Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ContourMorphology|Contour Morphology]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Contours|Contours]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomRtImport|Dicom Rt Import]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseAccumulation|Dose Accumulation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseComparison|Dose Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseVolumeHistogram|Dose Volume Histogram]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== Uiowa ==
 
* DWIConvert    <small>(cli, built-in)</small>
 
== UIowa ==
 
* DWIConvert    <small>(cli, built-in)</small>
 
== UNC ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DeveloperToolsForExtensions Developer Tools For Extensions]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DeveloperToolsForExtensions Developer Tools For Extensions] extension)</small>
 
* [[Documentation/4.4/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small>
 
* [[Documentation/4.4/Modules/PortPlacement|Port Placement]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PortPlacement|Port Placement]] extension)</small>
 
* [[Documentation/4.4/Modules/ResampleDTIVolume|Resample DTIVolume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ResampleScalarVectorDWIVolume|Resample Scalar Vector DWIVolume]]    <small>(cli, built-in)</small>
 
== Univ of Michigan ==
 
* [[Documentation/4.4/Extensions/CMFreg|Surface Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
== Univ. of Iowa ==
 
* [[Documentation/4.4/Modules/DICOMPETSUVPlugin|DICOMPETSUVPlugin]]
 
* [[Documentation/4.4/Modules/DICOMRWVMPlugin|DICOMRWVMPlugin]]
 
* [[Documentation/4.4/Extensions/PET-IndiC|PETIndi C]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
== University 'Magna Graecia' of Catanzaro ==
 
* [[Documentation/4.4/Extensions/SlicerRT|Plastimatch Py]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== University College Cork ==
 
 
* [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation]] extension)</small>
 
* [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation]] extension)</small>
== University of Heidelberg ==
+
* [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/AnglePlanes Angle Planes]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/AnglePlanes Angle Planes Extension] extension)</small>
* [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
== University of Iowa ==
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]] extension)</small>
 
* [[Documentation/4.4/Modules/PETTumorSegmentationEffect|PETTumor Segmentation Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]] extension)</small>
 
* [[Documentation/4.4/Extensions/PET-IndiC|Quantitative Indices CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Extensions/PET-IndiC|Quantitative Indices Tool]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
== University of Iowa) and Andrey Fedorov (SPL ==
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
== UPenn ==
 
 
* [[Documentation/4.4/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
* [[Documentation/4.4/Modules/EMSegment|EMSegment]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SceneViews|Scene Views]]    <small>(loadable, built-in)</small>
 
== Utah ==
 
* [[Documentation/4.4/Modules/LabelMapSmoothing|Label Map Smoothing]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
== UVa ==
 
* [[Documentation/4.4/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIUnbiasedNonLocalMeansFilter|DWIUnbiased Non Local Means Filter]]    <small>(cli, built-in)</small>
 
== UWA ==
 
* [[Documentation/4.4/Modules/ThingiverseBrowser|Thingiverse Browser]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ThingiverseBrowser|Thingiverse Browser]] extension)</small>
 
== WashU-St. Louis, dmarcus@wustl.edu ==
 
* [[Documentation/4.4/Extensions/XNATSlicer|Xnat Slicer]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] extension)</small>
 
== while at GE ==
 
* [[Documentation/4.4/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small>
 
= Modules by contributing individual =
 
191 contributing individuals:
 
* [[#.2F|/]]
 
* [[#a|a]]
 
* [[#Akila_Viswanathan|Akila Viswanathan]]
 
* [[#Alan_Morris|Alan Morris]]    <small>(Utah)</small>
 
* [[#Alex_Yarmakovich|Alex Yarmakovich]]    <small>(Isomics)</small>
 
* [[#Alex_Yarmarkovich|Alex Yarmarkovich]]    <small>(Kitware))</small>
 
* [[#Ali_Ghayoor|Ali Ghayoor]]
 
* [[#Alireza_Mehrtash|Alireza Mehrtash]]    <small>(SPL and BWH)</small>
 
* [[#Allen_Tannenbaum|Allen Tannenbaum]]    <small>(Stony Brook University)</small>
 
* [[#Amelie_Meyer|Amelie Meyer]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Analysis_Laboratory|Analysis Laboratory]]
 
* [[#Andinet_Enquobahrie|Andinet Enquobahrie]]    <small>(Kitware)</small>
 
* [[#Andras_Lasso|Andras Lasso]]    <small>(PerkLab, Queen's Universit)</small>
 
* [[#Andreas_Freudling|Andreas Freudling]]    <small>(SPL, BWH)</small>
 
* [[#Andrey_Fedorov|Andrey Fedorov]]    <small>(SPL B&W Harvard)</small>
 
* [[#Andriy_Kot|Andriy Kot]]    <small>(CRTC)</small>
 
* [[#Anonymous|Anonymous]]
 
* [[#Antonio_Damato|Antonio Damato]]
 
* [[#Antonio_Tristan_Vega|Antonio Tristan Vega]]    <small>(UVa)</small>
 
* [[#Anuja_Sharma|Anuja Sharma]]
 
* [[#Arie_Nakhmani|Arie Nakhmani]]    <small>(UAB)</small>
 
* [[#Atsushi_Yamada|Atsushi Yamada]]    <small>(Shiga University of Medical Science)</small>
 
* [[#Beatriz_Paniagua_from_Department_of_Orthodontics|Beatriz Paniagua from Department of Orthodontics]]    <small>(UNC)</small>
 
* [[#Benjamin_Long|Benjamin Long]]    <small>(Kitware)</small>
 
* [[#Benjamin_Yvernault|Benjamin Yvernault]]
 
* [[#Bill_Lorensen|Bill Lorensen]]    <small>(Noware)</small>
 
* [[#Brad_Davis|Brad Davis]]
 
* [[#Bradley_Lowekamp|Bradley Lowekamp]]    <small>(MSC/NLM)</small>
 
* [[#Brian_Zenger|Brian Zenger]]    <small>(CARMA)</small>
 
* [[#BWH|BWH]]
 
* [[#c|c]]
 
* [[#Carl-Fredrik_Westin|Carl-Fredrik Westin]]
 
* [[#Carl-Fredrik_Westin._The_directional_iterators_were_contributed_by_Luis_Ibanez|Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez]]    <small>(Kitware))</small>
 
* [[#Casey_B_Goodlett|Casey B Goodlett]]    <small>(Kitware)</small>
 
* [[#Charles_Marion|Charles Marion]]    <small>(Kitware)</small>
 
* [[#Christian_Bauer|Christian Bauer]]    <small>(Univ. of Iowa)</small>
 
* [[#Christian_Baumgartner|Christian Baumgartner]]
 
* [[#Csaba_Pinter|Csaba Pinter]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Dan_Marcus|Dan Marcus]]    <small>(Washington University in St. Louis)</small>
 
* [[#Daniel_Blezek|Daniel Blezek]]    <small>(GE)</small>
 
* [[#Daniel_Haehn|Daniel Haehn]]    <small>(UPenn)</small>
 
* [[#Danny_Perry|Danny Perry]]    <small>(Utah)</small>
 
* [[#Demian_Wassermann|Demian Wassermann]]    <small>(Brigham and Women's Hospital)</small>
 
* [[#Dinggang_Shen|Dinggang Shen]]    <small>(UNC)</small>
 
* [[#Dirk_Padfield|Dirk Padfield]]    <small>(GE)</small>
 
* [[#Dominik_Meier|Dominik Meier]]    <small>(SPL, BWH)</small>
 
* [[#e|e]]
 
* [[#er|er]]    <small>(Kingston General Hospital)</small>
 
* [[#Ethan_Ulrich|Ethan Ulrich]]    <small>(Univ. of Iowa)</small>
 
* [[#Eugene_Kholmovski|Eugene Kholmovski]]    <small>(CARMA)</small>
 
* [[#ez|ez]]    <small>(UVa)</small>
 
* [[#Fotis_Drakopoulos|Fotis Drakopoulos]]    <small>(CRTC)</small>
 
* [[#Francois_Budin|Francois Budin]]    <small>(NIRAL, UNC)</small>
 
* [[#Franklin_King|Franklin King]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Greg_Gardner|Greg Gardner]]    <small>(Utah)</small>
 
* [[#Greg_Harris|Greg Harris]]
 
* [[#Greg_Sharp|Greg Sharp]]    <small>(MGH, Boston)</small>
 
* [[#Gregory_Sharp|Gregory Sharp]]    <small>(MGH)</small>
 
* [[#Guido_Gerig|Guido Gerig]]    <small>(UNC)</small>
 
* [[#Guillaume_Pernelle|Guillaume Pernelle]]
 
* [[#Hans_J._Johnson|Hans J. Johnson]]
 
* [[#Hans_Johnson|Hans Johnson]]    <small>(SINAPSE)</small>
 
* [[#hans-johnson_-at-_uiowa.edu|hans-johnson -at- uiowa.edu]]
 
* [[#http:.2F.2Fwww.psychiatry.uiowa.edu|http://www.psychiatry.uiowa.edu]]
 
* [[#i|i]]
 
* [[#Ipek_Oguz|Ipek Oguz]]
 
* [[#Ivan_Kolesov|Ivan Kolesov]]    <small>(Stony Brook University)</small>
 
* [[#Jaime_Garcia-Guevara|Jaime Garcia-Guevara]]    <small>(Queen's University)</small>
 
* [[#Jan_Egger|Jan Egger]]
 
* [[#Jayender_Jagadeesan|Jayender Jagadeesan]]    <small>(BWH)</small>
 
* [[#Jean-Baptiste_Berger|Jean-Baptiste Berger]]    <small>(Kitware)</small>
 
* [[#Jean-Christophe_Fillion-Robin|Jean-Christophe Fillion-Robin]]    <small>(Kitware)</small>
 
* [[#Jennifer_Andrea|Jennifer Andrea]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Jessica_Forbes|Jessica Forbes]]    <small>(SINAPSE)</small>
 
* [[#Jim_Miller|Jim Miller]]    <small>(GE)</small>
 
* [[#Johan_Andruejol|Johan Andruejol]]    <small>(Kitware)</small>
 
* [[#John_Buatti|John Buatti]]    <small>(Univ. of Iowa)</small>
 
* [[#John_Evans|John Evans]]    <small>(MGH)</small>
 
* [[#Jonathan_Bronson|Jonathan Bronson]]    <small>(SCI Institute)</small>
 
* [[#Josh_Cates|Josh Cates]]    <small>(Utah)</small>
 
* [[#Joy_Matsui|Joy Matsui]]    <small>(UIowa)</small>
 
* [[#Julien_Finet|Julien Finet]]    <small>(Kitware)</small>
 
* [[#Julien_Jomier|Julien Jomier]]    <small>(Kitware)</small>
 
* [[#Junichi_Tokuda|Junichi Tokuda]]    <small>(BWH)</small>
 
* [[#K|K]]
 
* [[#Kent_Williams|Kent Williams]]    <small>(UIowa)</small>
 
* [[#Kent_WIlliams|Kent WIlliams]]
 
* [[#Kevin_Alex|Kevin Alex]]    <small>(Kingston General Hospital)</small>
 
* [[#Kevin_Wang|Kevin Wang]]    <small>(Princess Margaret Cancer Centre)</small>
 
* [[#Kilian_Pohl|Kilian Pohl]]    <small>(UPenn)</small>
 
* [[#Koichiro_Murakami|Koichiro Murakami]]    <small>(SUMS)</small>
 
* [[#Kyle_Sunderl|Kyle Sunderl]]    <small>(Queen's University)</small>
 
* [[#l|l]]
 
* [[#Lauren_Barber|Lauren Barber]]
 
* [[#Lauren_O_Donnell|Lauren O'Donnell]]    <small>(SPL, BWH)</small>
 
* [[#Laurent_Chauvin|Laurent Chauvin]]    <small>(BWH)</small>
 
* [[#Liang-Jia_Zhu|Liang-Jia Zhu]]    <small>(UAB)</small>
 
* [[#Liangjia_Zhu|Liangjia Zhu]]    <small>(Stony Brook University)</small>
 
* [[#Luca_Antiga|Luca Antiga]]    <small>(Orobix)</small>
 
* [[#Luis_G._Torres|Luis G. Torres]]    <small>(UNC)</small>
 
* [[#Luping_Fang|Luping Fang]]    <small>(College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)</small>
 
* [[#m|m]]
 
* [[#Marc_Niethammer|Marc Niethammer]]    <small>(UNC)</small>
 
* [[#Marcel_Prastawa_prastawa.40sci.utah.edu|Marcel Prastawa prastawa@sci.utah.edu]]
 
* [[#Mark_Scully|Mark Scully]]    <small>(Uiowa)</small>
 
* [[#Markus_Van_Tol|Markus Van Tol]]    <small>(University of Iowa) and Andrey Fedorov (SPL)</small>
 
* [[#Markus_van_Tol|Markus van Tol]]    <small>(Univ. of Iowa)</small>
 
* [[#Martin_Styner|Martin Styner]]    <small>(UNC)</small>
 
* [[#Mason_Winsauer|Mason Winsauer]]
 
* [[#Matt_Lougheed|Matt Lougheed]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Mattea_Welch|Mattea Welch]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Matthew_Holden|Matthew Holden]]    <small>(Queen's University)</small>
 
* [[#Matthew_S._Holden|Matthew S. Holden]]    <small>(Queen's University)</small>
 
* [[#Matthew_Woehlke|Matthew Woehlke]]    <small>(Kitware)</small>
 
* [[#Michael_Jeulin-Lagarrigue|Michael Jeulin-Lagarrigue]]    <small>(Kitware)</small>
 
* [[#Minjeong_Kim|Minjeong Kim]]    <small>(UNC)</small>
 
* [[#Nabgha_Fahrat|Nabgha Fahrat]]
 
* [[#Neuro_Image_Resarch|Neuro Image Resarch]]
 
* [[#Nicholas_Herlambang|Nicholas Herlambang]]    <small>(AZE R&D)</small>
 
* [[#Nick_Tustison|Nick Tustison]]    <small>(UPenn)</small>
 
* [[#Nicole_Aucoin|Nicole Aucoin]]    <small>(BWH)</small>
 
* [[#Nigel_Goh|Nigel Goh]]    <small>(UWA)</small>
 
* [[#Nikos_Chrisochoides|Nikos Chrisochoides]]    <small>(CRTC)</small>
 
* [[#Olivier_Clatz|Olivier Clatz]]    <small>(Asclepios INRIA) and Nikos Chrisochoides (CRTC)</small>
 
* [[#p|p]]
 
* [[#Paolo_Zaffino|Paolo Zaffino]]    <small>(University 'Magna Graecia' of Catanzaro)</small>
 
* [[#Pat_Marion|Pat Marion]]    <small>(Kitware)</small>
 
* [[#Paul_Mercea|Paul Mercea]]    <small>(University of Heidelberg)</small>
 
* [[#Pengdong_Xiao|Pengdong Xiao]]    <small>(Department of Orthodontics, UNC)</small>
 
* [[#Peter_Black|Peter Black]]    <small>(BWH)</small>
 
* [[#Peter_Karasev|Peter Karasev]]    <small>(Georgia Tech)</small>
 
* [[#Peter_Savadjiev|Peter Savadjiev]]    <small>(Kitware))</small>
 
* [[#Pierre_Seroul|Pierre Seroul]]    <small>(UNC)</small>
 
* [[#Pietro_Nardelli|Pietro Nardelli]]    <small>(University College Cork)</small>
 
* [[#Please_direct_questions_or_suggestions_to_http:.2F.2Fgroups.google.com.2Fgroup.2Fplastimatch|Please direct questions or suggestions to http://groups.google.com/group/plastimatch]]
 
* [[#Polina_Goll|Polina Goll]]
 
* [[#Qing_Pan|Qing Pan]]    <small>(College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)</small>
 
* [[#r|r]]
 
* [[#R|R]]
 
* [[#Raul_San_Jose|Raul San Jose]]    <small>(SPL, BWH)</small>
 
* [[#Reinhard_Beichel|Reinhard Beichel]]    <small>(University of Iowa)</small>
 
* [[#Reinhard_R._Beichel|Reinhard R. Beichel]]    <small>(Univ. of Iowa)</small>
 
* [[#Rob_MacLeod|Rob Mac Leod]]    <small>(Utah)</small>
 
* [[#Ron_Kikinis|Ron Kikinis]]    <small>(BWH)</small>
 
* [[#Ross_Whitaker|Ross Whitaker]]    <small>(Utah)</small>
 
* [[#Ruifeng_Chen|Ruifeng Chen]]    <small>(College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)</small>
 
* [[#S|S]]
 
* [[#Salma_Bengali|Salma Bengali]]    <small>(CARMA)</small>
 
* [[#Sam_Song|Sam Song]]
 
* [[#Santiago_Aja_Fern|Santiago Aja Fern]]    <small>(UVa)</small>
 
* [[#Sebastien_Barr_eacute.3B|Sebastien Barr&eacute;]]    <small>(Kitware)</small>
 
* [[#Sebastien_Barre|Sebastien Barre]]
 
* [[#Shigeyuki_Naka|Shigeyuki Naka]]    <small>(SUMS)</small>
 
* [[#Soichiro_Tani|Soichiro Tani]]    <small>(BWH, SUMS)</small>
 
* [[#Sonia_Pujol|Sonia Pujol]]    <small>(SPL, BWH)</small>
 
* [[#Stefan_Lienhard|Stefan Lienhard]]
 
* [[#Stephen_Aylward|Stephen Aylward]]    <small>(Kitware)</small>
 
* [[#Stephen_R_Aylward|Stephen R Aylward]]    <small>(Kitware)</small>
 
* [[#Steve_Pieper|Steve Pieper]]    <small>(SPL)</small>
 
* [[#Sunil_Kumar|Sunil Kumar]]    <small>(Moka Creative, LLC, kumar.sunil.p@gmail.com)</small>
 
* [[#Sylvain_Bouix|Sylvain Bouix]]    <small>(BWH)</small>
 
* [[#Sylvain_Gouttard|Sylvain Gouttard]]
 
* [[#t|t]]
 
* [[#Tamas_Ungi|Tamas Ungi]]    <small>(PerkLab, Queen's Universit)</small>
 
* [[#the_University_of_North_Carolina_at_Chapel_Hill|the University of North Carolina at Chapel Hill]]    <small>(UNC)</small>
 
* [[#Tina_Kapur|Tina Kapur]]
 
* [[#Tobias_Penzkofer|Tobias Penzkofer]]
 
* [[#Tohru_Tani|Tohru Tani]]    <small>(SUMS)</small>
 
* [[#UNC_Medical_School|UNC Medical School]]
 
* [[#UofM_School_Of_Dentistry|Uof M School Of Dentistry]]
 
* [[#UofM_School_of_Dentistry|Uof M School of Dentistry]]
 
* [[#Vince_Magnotta|Vince Magnotta]]    <small>(UIowa)</small>
 
* [[#Vincent_A._Magnotta|Vincent A. Magnotta]]
 
* [[#Vincent_Magnotta|Vincent Magnotta]]
 
* [[#Vinicius_Boen|Vinicius Boen]]    <small>(Univ of Michigan)</small>
 
* [[#Vivek_Narayan|Vivek Narayan]]    <small>(BWH)</small>
 
* [[#Wendy_Plesniak|Wendy Plesniak]]    <small>(SPL, BWH)</small>
 
* [[#Xiaodong_Tao|Xiaodong Tao]]    <small>(GE)</small>
 
* [[#Xiaofeng_Liu|Xiaofeng Liu]]    <small>(GE GLobal Research)</small>
 
* [[#Xiaojun_Chen|Xiaojun Chen]]
 
* [[#y_Wells|y Wells]]
 
* [[#Yanling_Liu|Yanling Liu]]    <small>(SAIC-Frederick, NCI-Frederick)</small>
 
* [[#Yi_Gao|Yi Gao]]    <small>(BWH/UAB)</small>
 
* [[#Yinglin_Lee|Yinglin Lee]]    <small>(SPL, BWH)</small>
 
* [[#Yingxuan_Zhu|Yingxuan Zhu]]    <small>(GE)</small>
 
* [[#Yinpeng_Li|Yinpeng Li]]
 
* [[#Yixun_Liu|Yixun Liu]]    <small>(CRTC)</small>
 
* [[#Yogesh_Rathi|Yogesh Rathi]]    <small>(yogesh@bwh.harvard.edu)</small>
 
* [[#Yong_Zhang|Yong Zhang]]    <small>(IBM)</small>
 
* [[#Yumin_Yuan|Yumin Yuan]]
 
* [[#Yundi_Shi|Yundi Shi]]
 
== / ==
 
* Dicom Rt Import Plugin
 
== a ==
 
* Dicom Rt Import Plugin
 
== Akila Viswanathan ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
== Alan Morris ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Boolean REMOVEFilter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Connected Threshold Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Isolated Connected Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
* [[Documentation/4.4/Modules/LASegmentationWorkflow|LASegmentation Workflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/ScarVisualization|Scar Visualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
== Alex Yarmakovich ==
 
* [[Documentation/4.4/Modules/Models|Models]]    <small>(loadable, built-in)</small>
 
* Tractography Interactive Seeding    <small>(loadable, built-in)</small>
 
== Alex Yarmarkovich ==
 
* [[Documentation/4.4/Modules/Data|Data]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/FinslerTractography|Finsler Tractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/ImageLabelCombine|Image Label Combine]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Volumes|Volumes]]    <small>(loadable, built-in)</small>
 
== Ali Ghayoor ==
 
* BRAINSTransform Convert    <small>(cli, built-in)</small>
 
* Perform Metric Test    <small>(cli, built-in)</small>
 
== Alireza Mehrtash ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
* [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] extension)</small>
 
== Allen Tannenbaum ==
 
* [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
* [[Documentation/4.4/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
* [[Documentation/4.4/Modules/SobolevSegmenter|Sobolev Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]] extension)</small>
 
== Amelie Meyer ==
 
* [[Documentation/4.4/Modules/PlusRemote|Plus Remote]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
== Analysis Laboratory ==
 
 
* [[Documentation/4.4/Extensions/CMFreg|Apply Matrix]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Extensions/CMFreg|Apply Matrix]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
* [[Documentation/4.4/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
+
* [[Documentation/4.4/Extensions/SlicerRT|Beams]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
* [[Documentation/4.4/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelAddition|Label Addition]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelExtraction|Label Extraction]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
== Andinet Enquobahrie ==
 
* [[Documentation/4.4/Modules/PortPlacement|Port Placement]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PortPlacement|Port Placement]] extension)</small>
 
== Andras Lasso ==
 
* [[Documentation/4.4/Modules/ContourComparison|Contour Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ContourMorphology|Contour Morphology]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Contours|Contours]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomRtExport|Dicom Rt Export]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomRtImport|Dicom Rt Import]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseAccumulation|Dose Accumulation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseComparison|Dose Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseVolumeHistogram|Dose Volume Histogram]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Isodose|Isodose]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/MatlabCommander|Matlab Commander]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/4.4/Modules/MatlabModuleGenerator|Matlab Module Generator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Metafile Importer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Model Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/PlusRemote|Plus Remote]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequence Browser]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequences]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Model]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small>
 
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Roi]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small>
 
== Andreas Freudling ==
 
* [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
 
== Andrey Fedorov ==
 
* [[Documentation/4.4/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Modules/BSplineToDeformationField|BSpline To Deformation Field]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ChangeTracker|Change Tracker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
* Change Tracker Self Test
 
* [[Documentation/4.4/Modules/CropVolume|Crop Volume]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/DICOMRWVMPlugin|DICOMRWVMPlugin]]
 
* DICOMSegmentation Plugin
 
* [[Documentation/4.4/Modules/IntensityDifferenceMetric|Intensity Difference Metric]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
* [[Documentation/4.4/Extensions/Reporting|Label To DICOMSEGConverter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 
* Label To DICOMSEGConverter Self Test
 
* [[Documentation/4.4/Modules/MeshCompression|Mesh Compression]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
 
* Multi Volume Importer Plugin
 
* [[Documentation/4.4/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small>
 
* [[Documentation/4.4/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small>
 
* [[Documentation/4.4/Extensions/PET-IndiC|Quantitative Indices CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Extensions/PET-IndiC|Quantitative Indices Tool]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Extensions/Reporting|Reporting]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 
* Reporting Self Test
 
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
* [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] extension)</small>
 
* [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small>
 
== Andriy Kot ==
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small>
 
== Anonymous ==
 
* CLIROITest    <small>(cli, built-in)</small>
 
* EMSegment Transform To New Format    <small>(cli, built-in)</small>
 
== Antonio Damato ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
== Antonio Tristan Vega ==
 
* [[Documentation/4.4/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIUnbiasedNonLocalMeansFilter|DWIUnbiased Non Local Means Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/FinslerTractography|Finsler Tractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
== Anuja Sharma ==
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
== Arie Nakhmani ==
 
* [[Documentation/4.4/Modules/SobolevSegmenter|Sobolev Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]] extension)</small>
 
== Atsushi Yamada ==
 
* [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
* [[Documentation/4.4/Modules/PathExplorer|Path Explorer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small>
 
== Beatriz Paniagua from Department of Orthodontics ==
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small>
 
== Benjamin Long ==
 
* [[Documentation/4.4/Modules/SampleData|Sample Data]]    <small>(scripted, built-in)</small>
 
== Benjamin Yvernault ==
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
== Bill Lorensen ==
 
* [[Documentation/4.4/Modules/AddScalarVolumes|Add Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/CheckerBoardFilter|Checker Board Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/CreateDICOMSeries|Create DICOMSeries]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
* Diffusion Tensor Test    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ExecutionModelTour|Execution Model Tour]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleGrindPeakImageFilter|Grayscale Grind Peak Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleModelMaker|Grayscale Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/HistogramMatching|Histogram Matching]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MedianImageFilter|Median Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ModelMaker|Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiplyScalarVolumes|Multiply Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/OrientScalarVolume|Orient Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/OtsuThresholdImageFilter|Otsu Threshold Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ResampleScalarVolume|Resample Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Spacing Aware Curvature Diffusion]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Modules/SubtractScalarVolumes|Subtract Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SwissSkullStripper|Swiss Skull Stripper]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]] extension)</small>
 
* [[Documentation/4.4/Modules/VotingBinaryHoleFillingImageFilter|Voting Binary Hole Filling Image Filter]]    <small>(cli, built-in)</small>
 
== Brad Davis ==
 
* EMSegment Command Line    <small>(cli, built-in)</small>
 
== Bradley Lowekamp ==
 
 
* [[Documentation/4.4/Extensions/IASEM|Bin Shrink]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Bin Shrink]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
* [[Documentation/4.4/Extensions/IASEM|Double Threshold Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|IASEMImport]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|IASEMImport Series]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Label Object Statistics]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Modules/SimpleFilters|Simple Filters]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Spacing Aware Curvature Diffusion]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
== Brian Zenger ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
== BWH ==
 
* DICOMSegmentation Plugin
 
* Multi Volume Importer Plugin
 
== c ==
 
* Dicom Rt Import Plugin
 
== Carl-Fredrik Westin ==
 
* [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
== Carl-Fredrik Westin. The directional iterators were contributed by Luis Ibanez ==
 
* [[Documentation/4.4/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/FinslerTractography|Finsler Tractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
== Casey B Goodlett ==
 
* [[Documentation/4.4/Modules/ExpertAutomatedRegistration|Expert Automated Registration]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/FiducialRegistration|Fiducial Registration]]    <small>(cli, built-in)</small>
 
== Charles Marion ==
 
* [[Documentation/4.4/Modules/DataStore|Data Store]]    <small>(loadable, built-in)</small>
 
== Christian Bauer ==
 
* [[Documentation/4.4/Extensions/PET-IndiC|PETIndi C]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]] extension)</small>
 
* [[Documentation/4.4/Modules/PETTumorSegmentationEffect|PETTumor Segmentation Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]] extension)</small>
 
* [[Documentation/4.4/Extensions/PET-IndiC|Quantitative Indices CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Extensions/PET-IndiC|Quantitative Indices Tool]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
== Christian Baumgartner ==
 
* [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
== Csaba Pinter ==
 
* [[Documentation/4.4/Extensions/SlicerRT|Batch Contour Conversion]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Beams]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ContourComparison|Contour Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ContourMorphology|Contour Morphology]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Contours|Contours]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Data|Data]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/DicomRtExport|Dicom Rt Export]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomRtImport|Dicom Rt Import]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* Dicom Rt Import Self Test
 
* [[Documentation/4.4/Modules/DoseAccumulation|Dose Accumulation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseComparison|Dose Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseVolumeHistogram|Dose Volume Histogram]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Dvh Comparison]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo]    <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
* [[Documentation/4.4/Modules/Isodose|Isodose]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Planar Image]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/SubjectHierarchy|Subject Hierarchy]]    <small>(loadable, built-in)</small>
 
* Subject Hierarchy Core Plugins Self Test
 
* Subject Hierarchy Generic Self Test
 
* [[Documentation/4.4/Extensions/SlicerRT|Vff File Reader]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== Dan Marcus ==
 
* [[Documentation/4.4/Extensions/XNATSlicer|Xnat Slicer]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] extension)</small>
 
== Daniel Blezek ==
 
* [[Documentation/4.4/Modules/ExecutionModelTour|Execution Model Tour]]    <small>(cli, built-in)</small>
 
== Daniel Haehn ==
 
* [[Documentation/4.4/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 
* [http://slicer.vmtk.org/ Centerline Computation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/4.4/Modules/EMSegment|EMSegment]]    <small>(loadable, built-in)</small>
 
* EMSegment Command Line    <small>(cli, built-in)</small>
 
* [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/4.4/Modules/MergeModels|Merge Models]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SceneViews|Scene Views]]    <small>(loadable, built-in)</small>
 
* [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
== Danny Perry ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
== Demian Wassermann ==
 
* DICOM2Full Brain Tractography    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]]    <small>(cli, built-in)</small>
 
* Fiber Bundle Label Select    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/FinslerTractography|Finsler Tractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* test tractography display
 
* [[Documentation/4.4/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]]    <small>(cli, built-in)</small>
 
== Dinggang Shen ==
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Testing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Training]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
 
== Dirk Padfield ==
 
* [[Documentation/4.4/Modules/LabelMapSmoothing|Label Map Smoothing]]    <small>(cli, built-in)</small>
 
== Dominik Meier ==
 
* [[Documentation/4.4/Modules/FiducialRegistration|Fiducial Registration]]    <small>(cli, built-in)</small>
 
== e ==
 
* Dicom Rt Import Plugin
 
== er ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
== Ethan Ulrich ==
 
* [[Documentation/4.4/Modules/DICOMPETSUVPlugin|DICOMPETSUVPlugin]]
 
* [[Documentation/4.4/Modules/DICOMRWVMPlugin|DICOMRWVMPlugin]]
 
* [[Documentation/4.4/Extensions/PET-IndiC|PETIndi C]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Extensions/PET-IndiC|Quantitative Indices CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Extensions/PET-IndiC|Quantitative Indices Tool]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
== Eugene Kholmovski ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
== ez ==
 
* [[Documentation/4.4/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIUnbiasedNonLocalMeansFilter|DWIUnbiased Non Local Means Filter]]    <small>(cli, built-in)</small>
 
== Fotis Drakopoulos ==
 
 
* [[Documentation/4.4/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
* [[Documentation/4.4/Modules/MeshCompression|Mesh Compression]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small>
 
== Francois Budin ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DeveloperToolsForExtensions Developer Tools For Extensions]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DeveloperToolsForExtensions Developer Tools For Extensions] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small>
 
* [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]] extension)</small>
 
* [[Documentation/4.4/Modules/ResampleDTIVolume|Resample DTIVolume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ResampleScalarVectorDWIVolume|Resample Scalar Vector DWIVolume]]    <small>(cli, built-in)</small>
 
== Franklin King ==
 
* [[Documentation/4.4/Modules/CollectFiducials|Collect Fiducials]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Pivot Calibration]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/PlusRemote|Plus Remote]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/Scoliosis|Scoliosis Monitoring]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
* [[Documentation/4.4/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Transform Fusion]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
== Greg Gardner ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
== Greg Harris ==
 
* [[Documentation/4.4/Modules/BRAINSDemonWarp|BRAINSDemon Warp]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/BRAINSResample|BRAINSResample]]    <small>(cli, built-in)</small>
 
* VBRAINSDemon Warp    <small>(cli, built-in)</small>
 
== Greg Sharp ==
 
* [[Documentation/4.4/Modules/DicomRtExport|Dicom Rt Export]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== Gregory Sharp ==
 
* [[Documentation/4.4/Modules/DicomSroExport|Dicom Sro Export]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Plm Register]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== Guido Gerig ==
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli, built-in)</small>
 
== Guillaume Pernelle ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
== Hans J. Johnson ==
 
 
* [[Documentation/4.4/Modules/BRAINSDemonWarp|BRAINSDemon Warp]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/BRAINSDemonWarp|BRAINSDemon Warp]]    <small>(cli, built-in)</small>
 +
* BRAINSDWICleanup    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/BRAINSFit|BRAINSFit]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/BRAINSFit|BRAINSFit]]    <small>(cli, built-in)</small>
* BRAINSROIAuto   <small>(cli, built-in)</small>
+
* BRAINSLabel Stats   <small>(cli, built-in)</small>
* BRAINSTransform Convert    <small>(cli, built-in)</small>
 
* VBRAINSDemon Warp    <small>(cli, built-in)</small>
 
== Hans Johnson ==
 
 
* [[Documentation/4.4/Modules/BRAINSResample|BRAINSResample]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/BRAINSResample|BRAINSResample]]    <small>(cli, built-in)</small>
 
* BRAINSResize    <small>(cli, built-in)</small>
 
* BRAINSResize    <small>(cli, built-in)</small>
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures]    <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] extension)</small>
 
* DWIConvert    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
* [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
== hans-johnson -at- uiowa.edu ==
 
* [[Documentation/4.4/Modules/BRAINSFit|BRAINSFit]]    <small>(cli, built-in)</small>
 
 
* BRAINSROIAuto    <small>(cli, built-in)</small>
 
* BRAINSROIAuto    <small>(cli, built-in)</small>
== http://www.psychiatry.uiowa.edu ==
+
* BRAINSStrip Rotation   <small>(cli, built-in)</small>
* [[Documentation/4.4/Modules/BRAINSFit|BRAINSFit]]   <small>(cli, built-in)</small>
+
* BRAINSTransform Convert   <small>(cli, built-in)</small>
* BRAINSROIAuto   <small>(cli, built-in)</small>
+
* [[Documentation/4.4/Extensions/SlicerIGT|Breach Warning]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
== i ==
+
* [http://wiki.slicer.org/wiki/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]    <small>(loadable, bundled in [http://wiki.slicer.org/wiki/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
* Dicom Rt Import Plugin
+
* [[Documentation/4.4/Modules/CastScalarVolume|Cast Scalar Volume]]    <small>(cli, built-in)</small>
== Ipek Oguz ==
+
* [http://slicer.vmtk.org/ Centerline Computation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
* [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
+
* [[Documentation/4.4/Modules/ChangeTracker|Change Tracker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small>
* [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]] extension)</small>
+
* [[Documentation/4.4/Modules/CheckerBoardFilter|Checker Board Filter]]    <small>(cli, built-in)</small>
* [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
== Ivan Kolesov ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
== Jaime Garcia-Guevara ==
 
* [[Documentation/4.4/Extensions/SlicerIGT|Watchdog]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
== Jan Egger ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
== Jayender Jagadeesan ==
 
* [[Documentation/4.4/Modules/HeterogeneityCAD|Heterogeneity CAD]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small>
 
* [[Documentation/4.4/Modules/SegmentCAD|Segment CAD]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small>
 
* [[Documentation/4.4/Modules/TrackerStabilizer|Tracker Stabilizer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small>
 
== Jean-Baptiste Berger ==
 
* [[Documentation/4.4/Modules/DataStore|Data Store]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Fiber Compare]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Merge Stat With Fiber]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
== Jean-Christophe Fillion-Robin ==
 
* CLI4Test
 
* [[Documentation/4.4/Modules/DataStore|Data Store]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/FastGrowCut|Fast Grow Cut]]    <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small>
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
* fiber visibility crash2438
 
* label Toggle Bug2049
 
* [[Documentation/4.4/Modules/MatlabCommander|Matlab Commander]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/4.4/Modules/MatlabModuleGenerator|Matlab Module Generator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/SampleData|Sample Data]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/SimpleFilters|Simple Filters]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small>
 
* [[Documentation/4.4/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Welcome|Welcome]]    <small>(loadable, built-in)</small>
 
== Jennifer Andrea ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Vff File Reader]]   <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== Jessica Forbes ==
 
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures]    <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] extension)</small>
 
== Jim Miller ==
 
* Charting   <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small>
 
* [[Documentation/4.4/Modules/SimpleRegionGrowingSegmentation|Simple Region Growing Segmentation]]    <small>(cli, built-in)</small>
 
* Slice Link Logic    <small>(scripted, built-in)</small>
 
* Slicer4Minute    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 
* View Controllers Slice Interpolation Bug1926
 
== Johan Andruejol ==
 
* [[Documentation/4.4/Modules/Units|Units]]    <small>(loadable, built-in)</small>
 
== John Buatti ==
 
* [[Documentation/4.4/Extensions/PET-IndiC|PETIndi C]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Extensions/PET-IndiC|Quantitative Indices CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Extensions/PET-IndiC|Quantitative Indices Tool]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
== John Evans ==
 
* [[Documentation/4.4/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small>
 
== Jonathan Bronson ==
 
 
* [[Documentation/4.4/Extensions/CleaverExtension|Cleaver CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]] extension)</small>
 
* [[Documentation/4.4/Extensions/CleaverExtension|Cleaver CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]] extension)</small>
== Josh Cates ==
 
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
Line 1,716: Line 552:
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
* [[Documentation/4.4/Modules/LabelMapSmoothing|Label Map Smoothing]]    <small>(cli, built-in)</small>
+
* [[Documentation/4.4/Modules/CollectFiducials|Collect Fiducials]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
* [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
* [[Documentation/4.4/Modules/LASegmentationWorkflow|LASegmentation Workflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/ScarVisualization|Scar Visualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
== Joy Matsui ==
 
* DWIConvert    <small>(cli, built-in)</small>
 
== Julien Finet ==
 
* [[Documentation/4.4/Modules/Cameras|Cameras]]    <small>(loadable, built-in)</small>
 
 
* [[Documentation/4.4/Modules/Colors|Colors]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Colors|Colors]]    <small>(loadable, built-in)</small>
* [[Documentation/4.4/Modules/Data|Data]]    <small>(loadable, built-in)</small>
+
* [[Documentation/4.4/Modules/CompareVolumes|Compare Volumes]]    <small>(scripted, built-in)</small>
* Double Arrays    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/EventBroker|Event Broker]]
 
* [[Documentation/4.4/Extensions/ImageMaker|Image Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ImageMaker|Image Maker]] extension)</small>
 
* [[Documentation/4.4/Modules/Models|Models]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
 
* Scene Performance    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/ThresholdScalarVolume|Threshold Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/TractographyDisplay|Tractography Display]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Units|Units]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Volumes|Volumes]]    <small>(loadable, built-in)</small>
 
== Julien Jomier ==
 
* [[Documentation/4.4/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]]    <small>(cli, built-in)</small>
 
== Junichi Tokuda ==
 
* [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
* [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]] extension)</small>
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Dilate Label]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Label]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
 
* [[Documentation/4.4/Modules/PathExplorer|Path Explorer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small>
 
* [[Documentation/4.4/Modules/VolumeResliceDriver|Volume Reslice Driver]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
== K ==
 
* Dicom Rt Import Plugin
 
== Kent Williams ==
 
* BRAINSDWICleanup    <small>(cli, built-in)</small>
 
* BRAINSTransform Convert    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* DWIConvert    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
== Kent WIlliams ==
 
* BRAINSStrip Rotation    <small>(cli, built-in)</small>
 
== Kevin Alex ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
== Kevin Wang ==
 
* Colors Scalar Bar Self Test
 
 
* [[Documentation/4.4/Modules/ContourComparison|Contour Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ContourComparison|Contour Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ContourMorphology|Contour Morphology]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ContourMorphology|Contour Morphology]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Contours|Contours]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Contours|Contours]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
* [[Documentation/4.4/Modules/DicomRtExport|Dicom Rt Export]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
+
* [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
* [[Documentation/4.4/Modules/DicomRtImport|Dicom Rt Import]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomSroExport|Dicom Sro Export]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomSroImport|Dicom Sro Import]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* Dicom Sro Import Plugin
 
* [[Documentation/4.4/Modules/DoseAccumulation|Dose Accumulation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseComparison|Dose Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseVolumeHistogram|Dose Volume Histogram]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Isodose|Isodose]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/MatlabCommander|Matlab Commander]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/4.4/Modules/MatlabModuleGenerator|Matlab Module Generator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequence Browser]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequences]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
== Kilian Pohl ==
 
* [[Documentation/4.4/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/ChangeTracker|Change Tracker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
* [[Documentation/4.4/Modules/EMSegment|EMSegment]]    <small>(loadable, built-in)</small>
 
* EMSegment Command Line    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SceneViews|Scene Views]]    <small>(loadable, built-in)</small>
 
== Koichiro Murakami ==
 
 
* [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
* [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
* [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small>
+
* [[Documentation/4.4/Modules/CreateDICOMSeries|Create DICOMSeries]]    <small>(cli, built-in)</small>
== Kyle Sunderl ==
+
* [[Documentation/4.4/Extensions/SlicerIGT|Create Models]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
* [[Documentation/4.4/Extensions/SlicerRT|Dvh Comparison]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
+
* [[Documentation/4.4/Modules/CropVolume|Crop Volume]]    <small>(loadable, built-in)</small>
== l ==
+
* [[Documentation/4.4/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]]    <small>(cli, built-in)</small>
* Dicom Rt Import Plugin
 
== Lauren Barber ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
== Lauren O'Donnell ==
 
* Fiber Bundle Label Select    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ProbeVolumeWithModel|Probe Volume With Model]]    <small>(cli, built-in)</small>
 
== Laurent Chauvin ==
 
 
* [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]] extension)</small>
 
* [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]] extension)</small>
* [[Documentation/4.4/Modules/DiceComputation|Dice Computation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]] extension)</small>
 
* [[Documentation/4.4/Modules/PathExplorer|Path Explorer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small>
 
* [[Documentation/4.4/Modules/TrackerStabilizer|Tracker Stabilizer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small>
 
== Liang-Jia Zhu ==
 
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
== Liangjia Zhu ==
 
* [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
== Luca Antiga ==
 
* [http://slicer.vmtk.org/ Centerline Computation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/4.4/Modules/SurfaceToolbox|Surface Toolbox]]    <small>(scripted, built-in)</small>
 
* [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
== Luis G. Torres ==
 
* [[Documentation/4.4/Modules/PortPlacement|Port Placement]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PortPlacement|Port Placement]] extension)</small>
 
== Luping Fang ==
 
* [[Documentation/4.4/Modules/GyroGuide|Gyro Guide]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]] extension)</small>
 
== m ==
 
* Dicom Rt Import Plugin
 
== Marc Niethammer ==
 
* [[Documentation/4.4/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]]    <small>(cli, built-in)</small>
 
== Marcel Prastawa prastawa@sci.utah.edu ==
 
* [http://www.nitrc.org/projects/abc ABC]    <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small>
 
== Mark Scully ==
 
* DWIConvert    <small>(cli, built-in)</small>
 
== Markus Van Tol ==
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
== Markus van Tol ==
 
* [[Documentation/4.4/Extensions/PET-IndiC|PETIndi C]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]] extension)</small>
 
* [[Documentation/4.4/Modules/PETTumorSegmentationEffect|PETTumor Segmentation Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]] extension)</small>
 
* [[Documentation/4.4/Extensions/PET-IndiC|Quantitative Indices CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Extensions/PET-IndiC|Quantitative Indices Tool]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
== Martin Styner ==
 
* [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
== Mason Winsauer ==
 
* [[Documentation/4.4/Extensions/CMFreg|Apply Matrix]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelAddition|Label Addition]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelExtraction|Label Extraction]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
== Matt Lougheed ==
 
* [[Documentation/4.4/Modules/ResectionVolume|Resection Volume]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ResectionPlanner|Resection Planner]] extension)</small>
 
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Model]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small>
 
== Mattea Welch ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
== Matthew Holden ==
 
* [[Documentation/4.4/Extensions/SlicerIGT|Breach Warning]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Fiducial Registration Wizard]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Metafile Importer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Extensions/PerkTutor|Python Metrics Calculator]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequence Browser]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequences]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
== Matthew S. Holden ==
 
* [[Documentation/4.4/Modules/PerkEvaluator|Perk Evaluator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Modules/TransformRecorder|Transform Recorder]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Modules/WorkflowSegmentation|Workflow Segmentation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
== Matthew Woehlke ==
 
* [[Documentation/4.4/Modules/ExtensionWizard|Extension Wizard]]    <small>(scripted, built-in)</small>
 
== Michael Jeulin-Lagarrigue ==
 
* [[Documentation/4.4/Modules/Reformat|Reformat]]    <small>(loadable, built-in)</small>
 
== Minjeong Kim ==
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Testing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Training]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
 
== Nabgha Fahrat ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
== Neuro Image Resarch ==
 
* [[Documentation/4.4/Extensions/CMFreg|Apply Matrix]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelAddition|Label Addition]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelExtraction|Label Extraction]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
== Nicholas Herlambang ==
 
* JRC2013Vis
 
== Nick Tustison ==
 
* [[Documentation/4.4/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]]    <small>(cli, built-in)</small>
 
== Nicole Aucoin ==
 
* [[Documentation/4.4/Modules/ACPCTransform|ACPCTransform]]    <small>(cli, built-in)</small>
 
* Add Many Markups Fiducial Test
 
* [[Documentation/4.4/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/CastScalarVolume|Cast Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Colors|Colors]]    <small>(loadable, built-in)</small>
 
* Colors Scalar Bar Self Test
 
 
* [[Documentation/4.4/Modules/Data|Data]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Data|Data]]    <small>(loadable, built-in)</small>
* Fiducial Layout Switch Bug1914
+
* [[Documentation/4.4/Modules/DataProbe|Data Probe]]    <small>(scripted, built-in)</small>
* [[Documentation/4.4/Modules/GrayscaleModelMaker|Grayscale Model Maker]]    <small>(cli, built-in)</small>
+
* [[Documentation/4.4/Modules/DataStore|Data Store]]    <small>(loadable, built-in)</small>
* [[Documentation/4.4/Modules/Markups|Markups]]   <small>(loadable, built-in)</small>
 
* Markups In Compare Viewers Self Test
 
* Markups In Views Self Test
 
* [[Documentation/4.4/Modules/MaskScalarVolume|Mask Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MergeModels|Merge Models]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ModelMaker|Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Models|Models]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/ModelToLabelMap|Model To Label Map]]    <small>(cli, built-in)</small>
 
* Neurosurgical Planning Tutorial Markups Self Test
 
* [[Documentation/4.4/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/4.4/Extensions/Reporting|Reporting]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 
* [[Documentation/4.4/Modules/SceneViews|Scene Views]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
* [[Documentation/4.4/Modules/ThresholdScalarVolume|Threshold Scalar Volume]]    <small>(cli, built-in)</small>
 
* Volume Rendering Scene Close   <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/Volumes|Volumes]]    <small>(loadable, built-in)</small>
 
== Nigel Goh ==
 
* [[Documentation/4.4/Modules/ThingiverseBrowser|Thingiverse Browser]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ThingiverseBrowser|Thingiverse Browser]] extension)</small>
 
== Nikos Chrisochoides ==
 
* [[Documentation/4.4/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Modules/MeshCompression|Mesh Compression]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small>
 
== Olivier Clatz ==
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small>
 
== p ==
 
* Dicom Rt Import Plugin
 
== Paolo Zaffino ==
 
* [[Documentation/4.4/Extensions/SlicerRT|Plastimatch Py]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== Pat Marion ==
 
* [[Documentation/4.4/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small>
 
== Paul Mercea ==
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
== Pengdong Xiao ==
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small>
 
== Peter Black ==
 
* [[Documentation/4.4/Modules/ChangeTracker|Change Tracker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
== Peter Karasev ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
== Peter Savadjiev ==
 
* [[Documentation/4.4/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/FinslerTractography|Finsler Tractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
== Pierre Seroul ==
 
* [[Documentation/4.4/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli, built-in)</small>
 
== Pietro Nardelli ==
 
* [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation]] extension)</small>
 
== Please direct questions or suggestions to http://groups.google.com/group/plastimatch ==
 
* [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer bspline]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer landwarp]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== Polina Goll ==
 
* EMSegment Command Line    <small>(cli, built-in)</small>
 
== Qing Pan ==
 
* [[Documentation/4.4/Modules/GyroGuide|Gyro Guide]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]] extension)</small>
 
== r ==
 
* Dicom Rt Import Plugin
 
== R ==
 
* Dicom Rt Import Plugin
 
== Raul San Jose ==
 
* [[Documentation/4.4/Modules/DiffusionTensorScalarMeasurements|Diffusion Tensor Scalar Measurements]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIToDTIEstimation|DWITo DTIEstimation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]]    <small>(cli, built-in)</small>
 
== Reinhard Beichel ==
 
* [[Documentation/4.4/Extensions/PET-IndiC|Quantitative Indices CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Extensions/PET-IndiC|Quantitative Indices Tool]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
== Reinhard R. Beichel ==
 
* [[Documentation/4.4/Extensions/PET-IndiC|PETIndi C]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
== Rob MacLeod ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Boolean REMOVEFilter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Connected Threshold Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Isolated Connected Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
* [[Documentation/4.4/Modules/LASegmentationWorkflow|LASegmentation Workflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/ScarVisualization|Scar Visualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
== Ron Kikinis ==
 
* [[Documentation/4.4/Modules/ACPCTransform|ACPCTransform]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/CastScalarVolume|Cast Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ChangeTracker|Change Tracker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
* [[Documentation/4.4/Modules/CropVolume|Crop Volume]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MaskScalarVolume|Mask Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MergeModels|Merge Models]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ModelMaker|Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/4.4/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SurfaceToolbox|Surface Toolbox]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
* [[Documentation/4.4/Modules/ThresholdScalarVolume|Threshold Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
 
== Ross Whitaker ==
 
* [[Documentation/4.4/Modules/LabelMapSmoothing|Label Map Smoothing]]    <small>(cli, built-in)</small>
 
== Ruifeng Chen ==
 
* [[Documentation/4.4/Modules/GyroGuide|Gyro Guide]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]] extension)</small>
 
== S ==
 
* Dicom Rt Import Plugin
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
== Salma Bengali ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Boolean REMOVEFilter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Connected Threshold Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Isolated Connected Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/LASegmentationWorkflow|LASegmentation Workflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/ScarVisualization|Scar Visualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
== Sam Song ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
== Santiago Aja Fern ==
 
* [[Documentation/4.4/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIUnbiasedNonLocalMeansFilter|DWIUnbiased Non Local Means Filter]]    <small>(cli, built-in)</small>
 
== Sebastien Barr&eacute; ==
 
* [[Documentation/4.4/Modules/Cameras|Cameras]]    <small>(loadable, built-in)</small>
 
== Sebastien Barre ==
 
* EMSegment Command Line    <small>(cli, built-in)</small>
 
== Shigeyuki Naka ==
 
* [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
== Soichiro Tani ==
 
* [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
== Sonia Pujol ==
 
 
* [[Documentation/4.4/Modules/DiceComputation|Dice Computation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]] extension)</small>
 
* [[Documentation/4.4/Modules/DiceComputation|Dice Computation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]] extension)</small>
* DTIexport    <small>(cli, built-in)</small>
 
* DTIimport    <small>(cli, built-in)</small>
 
== Stefan Lienhard ==
 
* [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
== Stephen Aylward ==
 
* [[Documentation/4.4/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]]    <small>(cli, built-in)</small>
 
== Stephen R Aylward ==
 
* [[Documentation/4.4/Modules/ExpertAutomatedRegistration|Expert Automated Registration]]    <small>(cli, built-in)</small>
 
== Steve Pieper ==
 
* Atlas Tests
 
* [[Documentation/4.4/Extensions/IASEM|Binary Watershed Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [http://slicer.vmtk.org/ Centerline Computation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/4.4/Modules/CompareVolumes|Compare Volumes]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/DataProbe|Data Probe]]    <small>(scripted, built-in)</small>
 
 
* [[Documentation/4.4/Modules/DICOM|DICOM]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/DICOM|DICOM]]    <small>(scripted, built-in)</small>
* DICOMDiffusion Volume Plugin
+
* DICOM2Full Brain Tractography   <small>(scripted, built-in)</small>
* DICOMLongitudinal PETCTPlugin
+
* [[Documentation/4.4/Modules/DicomRtExport|Dicom Rt Export]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
* DICOMScalar Volume Plugin
+
* [[Documentation/4.4/Modules/DicomRtImport|Dicom Rt Import]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
* DICOMSlicer Data Bundle Plugin
+
* [[Documentation/4.4/Modules/DicomSroExport|Dicom Sro Export]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
* [[Documentation/4.4/Modules/Endoscopy|Endoscopy]]   <small>(scripted, built-in)</small>
+
* [[Documentation/4.4/Modules/DicomSroImport|Dicom Sro Import]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
* fiber visibility crash2438
 
* [[Documentation/4.4/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]]    <small>(scripted, built-in)</small>
 
* label Toggle Bug2049
 
* [[Documentation/4.4/Modules/LandmarkRegistration|Landmark Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
 
* Performance Tests
 
* [[Documentation/4.4/Modules/PETTumorSegmentationEffect|PETTumor Segmentation Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]] extension)</small>
 
* [[Documentation/4.4/Extensions/Reporting|Reporting]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 
* RSNA2012Prostate Demo
 
* RSNAQuant Tutorial
 
* RSNAVis Tutorial
 
* [[Documentation/4.4/Modules/SampleData|Sample Data]]    <small>(scripted, built-in)</small>
 
* scene Import2428
 
* Self Tests
 
* [[Documentation/4.4/Modules/SimpleFilters|Simple Filters]]    <small>(scripted, built-in)</small>
 
* slicer Close Crash Bug2590
 
* Slicer MRBTest
 
* [[Documentation/4.4/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small>
 
* Threshold Threading Test
 
* [[Documentation/4.4/Modules/VectorToScalarVolume|Vector To Scalar Volume]]    <small>(scripted, built-in)</small>
 
* [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/4.4/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Volumes|Volumes]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Extensions/XNATSlicer|Xnat Slicer]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] extension)</small>
 
== Sunil Kumar ==
 
* [[Documentation/4.4/Extensions/XNATSlicer|Xnat Slicer]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] extension)</small>
 
== Sylvain Bouix ==
 
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
== Sylvain Gouttard ==
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
== t ==
 
* Dicom Rt Import Plugin
 
== Tamas Ungi ==
 
* [[Documentation/4.4/Extensions/SlicerIGT|Breach Warning]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* Breach Warning Self Test
 
* [[Documentation/4.4/Modules/CollectFiducials|Collect Fiducials]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Create Models]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Fiducial Registration Wizard]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Fiducials To Model Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Model Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/OpenIGTLinkRemote|Open IGTLink Remote]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/PerkEvaluator|Perk Evaluator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Pivot Calibration]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/PlusRemote|Plus Remote]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/PerkTutor|Python Metrics Calculator]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Extensions/Scoliosis|Scoliosis Monitoring]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
* [[Documentation/4.4/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Transform Fusion]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/TransformRecorder|Transform Recorder]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Ultrasound Snapshots]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/VolumeResliceDriver|Volume Reslice Driver]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Watchdog]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* Watchdog Self Test
 
* [[Documentation/4.4/Modules/WorkflowSegmentation|Workflow Segmentation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
== the University of North Carolina at Chapel Hill ==
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small>
 
== Tina Kapur ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
== Tobias Penzkofer ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
== Tohru Tani ==
 
* [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
== UNC Medical School ==
 
* [[Documentation/4.4/Extensions/CMFreg|Apply Matrix]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelAddition|Label Addition]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelExtraction|Label Extraction]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
== UofM School Of Dentistry ==
 
* [[Documentation/4.4/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
== UofM School of Dentistry ==
 
* [[Documentation/4.4/Extensions/CMFreg|Apply Matrix]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelAddition|Label Addition]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelExtraction|Label Extraction]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
== Vince Magnotta ==
 
* DWIConvert    <small>(cli, built-in)</small>
 
== Vincent A. Magnotta ==
 
* BRAINSLabel Stats    <small>(cli, built-in)</small>
 
== Vincent Magnotta ==
 
* [[Documentation/4.4/Modules/BRAINSResample|BRAINSResample]]    <small>(cli, built-in)</small>
 
== Vinicius Boen ==
 
* [[Documentation/4.4/Extensions/CMFreg|Apply Matrix]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelAddition|Label Addition]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelExtraction|Label Extraction]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Extensions/CMFreg|Surface Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
== Vivek Narayan ==
 
* [[Documentation/4.4/Modules/HeterogeneityCAD|Heterogeneity CAD]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small>
 
* [[Documentation/4.4/Modules/SegmentCAD|Segment CAD]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small>
 
== Wendy Plesniak ==
 
* [[Documentation/4.4/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/4.4/Modules/SceneViews|Scene Views]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
* [[Documentation/4.4/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Welcome|Welcome]]    <small>(loadable, built-in)</small>
 
== Xiaodong Tao ==
 
* DWIConvert    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ModelToLabelMap|Model To Label Map]]    <small>(cli, built-in)</small>
 
== Xiaofeng Liu ==
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Testing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Training]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
 
== Xiaojun Chen ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
== y Wells ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
== Yanling Liu ==
 
* [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
 
== Yi Gao ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
* [[Documentation/4.4/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
== Yinglin Lee ==
 
* Test Grid Transform Registration    <small>(cli, built-in)</small>
 
== Yingxuan Zhu ==
 
* [[Documentation/4.4/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small>
 
== Yinpeng Li ==
 
* [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
== Yixun Liu ==
 
* [[Documentation/4.4/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Modules/MeshCompression|Mesh Compression]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small>
 
== Yogesh Rathi ==
 
* [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
== Yong Zhang ==
 
* [[Documentation/4.4/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 
== Yumin Yuan ==
 
* EMSegment Command Line    <small>(cli, built-in)</small>
 
== Yundi Shi ==
 
* [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
= Modules by type =
 
3 types:
 
* [[#cli|cli]]
 
* [[#loadable|loadable]]
 
* [[#scripted|scripted]]
 
== cli ==
 
* [http://www.nitrc.org/projects/abc ABC]    <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small>
 
* [[Documentation/4.4/Modules/ACPCTransform|ACPCTransform]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/AddScalarVolumes|Add Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation]] extension)</small>
 
* [[Documentation/4.4/Extensions/CMFreg|Apply Matrix]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Bin Shrink]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Modules/BRAINSDemonWarp|BRAINSDemon Warp]]    <small>(cli, built-in)</small>
 
* BRAINSDWICleanup    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/BRAINSFit|BRAINSFit]]    <small>(cli, built-in)</small>
 
* BRAINSLabel Stats    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/BRAINSResample|BRAINSResample]]    <small>(cli, built-in)</small>
 
* BRAINSResize    <small>(cli, built-in)</small>
 
* BRAINSROIAuto    <small>(cli, built-in)</small>
 
* BRAINSStrip Rotation    <small>(cli, built-in)</small>
 
* BRAINSTransform Convert    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/BSplineToDeformationField|BSpline To Deformation Field]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/CastScalarVolume|Cast Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/CheckerBoardFilter|Checker Board Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/CleaverExtension|Cleaver CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]] extension)</small>
 
* CLIROITest    <small>(cli, built-in)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Boolean REMOVEFilter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Connected Threshold Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Isolated Connected Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* [[Documentation/4.4/Modules/CreateDICOMSeries|Create DICOMSeries]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
 
* [[Documentation/4.4/Modules/DiffusionTensorScalarMeasurements|Diffusion Tensor Scalar Measurements]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DiffusionTensorScalarMeasurements|Diffusion Tensor Scalar Measurements]]    <small>(cli, built-in)</small>
* Diffusion Tensor Test    <small>(cli, built-in)</small>
 
 
* [[Documentation/4.4/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Dilate Label]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Dilate Label]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
 +
* [[Documentation/4.4/Modules/DoseAccumulation|Dose Accumulation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 +
* [[Documentation/4.4/Modules/DoseComparison|Dose Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 +
* [[Documentation/4.4/Extensions/MarginCalculator|Dose Morphology]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
 +
* [[Documentation/4.4/Extensions/MarginCalculator|Dose Population Histogram]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
 +
* [[Documentation/4.4/Modules/DoseVolumeHistogram|Dose Volume Histogram]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 +
* [[Documentation/4.4/Modules/dPetBrainQuantification|d Pet Brain Quantification]]    <small>(scripted, bundled in [http://gti-fing.github.io/SlicerPetSpectAnalysis Pet Spect Analysis] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
* DTIexport    <small>(cli, built-in)</small>
 
* DTIimport    <small>(cli, built-in)</small>
 
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 +
* [[Documentation/4.4/Extensions/SlicerRT|Dvh Comparison]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* DWIConvert    <small>(cli, built-in)</small>
 
* DWIConvert    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIToDTIEstimation|DWITo DTIEstimation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIToDTIEstimation|DWITo DTIEstimation]]    <small>(cli, built-in)</small>
* [[Documentation/4.4/Modules/DWIUnbiasedNonLocalMeansFilter|DWIUnbiased Non Local Means Filter]]    <small>(cli, built-in)</small>
+
* [[Documentation/4.4/Extensions/EasyClip|Easy Clip]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/EasyClip|Easy Clip]] extension)</small>
 +
* [[Documentation/4.4/Modules/EMSegment|EMSegment]]    <small>(loadable, built-in)</small>
 
* EMSegment Command Line    <small>(cli, built-in)</small>
 
* EMSegment Command Line    <small>(cli, built-in)</small>
 +
* EMSegment Quick    <small>(loadable, built-in)</small>
 
* EMSegment Transform To New Format    <small>(cli, built-in)</small>
 
* EMSegment Transform To New Format    <small>(cli, built-in)</small>
 +
* [[Documentation/4.4/Modules/Endoscopy|Endoscopy]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Label]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Label]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
* [[Documentation/4.4/Modules/ExecutionModelTour|Execution Model Tour]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ExpertAutomatedRegistration|Expert Automated Registration]]    <small>(cli, built-in)</small>
 
 
* [[Documentation/4.4/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli, built-in)</small>
 +
* [[Documentation/4.4/Modules/FastGrowCut|Fast Grow Cut]]    <small>(loadable, bundled in [https://www.slicer.org/wiki/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small>
 +
* [http://wiki.slicer.org/wiki/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter]    <small>(loadable, bundled in [http://wiki.slicer.org/wiki/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
* Fiber Bundle Label Select    <small>(cli, built-in)</small>
 
* Fiber Bundle Label Select    <small>(cli, built-in)</small>
 +
* [[Documentation/4.4/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Fiber Compare]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Fiber Compare]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Modules/FiducialRegistration|Fiducial Registration]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/FiducialRegistration|Fiducial Registration]]    <small>(cli, built-in)</small>
 +
* [[Documentation/4.4/Extensions/SlicerIGT|Fiducial Registration Wizard]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 +
* [[Documentation/4.4/Extensions/SlicerIGT|Fiducials To Model Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/FinslerTractography|Finsler Tractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/FinslerTractography|Finsler Tractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]]    <small>(cli, built-in)</small>
 +
* [http://www.slicer.org/wiki/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 +
* [http://www.slicer.org/wiki/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo]    <small>(loadable, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
* [[Documentation/4.4/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]]    <small>(cli, built-in)</small>
Line 2,273: Line 618:
 
* [[Documentation/4.4/Modules/GrayscaleModelMaker|Grayscale Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleModelMaker|Grayscale Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 +
* [[Documentation/4.4/Modules/GyroGuide|Gyro Guide]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]] extension)</small>
 +
* [[Documentation/4.4/Modules/HeterogeneityCAD|Heterogeneity CAD]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small>
 
* [[Documentation/4.4/Modules/HistogramMatching|Histogram Matching]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/HistogramMatching|Histogram Matching]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/IASEM|IASEMImport]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|IASEMImport]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
Line 2,278: Line 625:
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Testing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Testing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Training]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Training]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
 +
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
* [[Documentation/4.4/Modules/ImageLabelCombine|Image Label Combine]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ImageLabelCombine|Image Label Combine]]    <small>(cli, built-in)</small>
* [[Documentation/4.4/Extensions/ImageMaker|Image Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ImageMaker|Image Maker]] extension)</small>
 
 
* [[Documentation/4.4/Modules/IntensityDifferenceMetric|Intensity Difference Metric]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
* [[Documentation/4.4/Modules/IntensityDifferenceMetric|Intensity Difference Metric]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small>
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small>
 +
* [[Documentation/4.4/Modules/Isodose|Isodose]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 +
* [http://wiki.slicer.org/wiki/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter KUtil]    <small>(scripted, bundled in [http://wiki.slicer.org/wiki/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
* [[Documentation/4.4/Modules/LabelAddition|Label Addition]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelAddition|Label Addition]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelExtraction|Label Extraction]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelExtraction|Label Extraction]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelMapSmoothing|Label Map Smoothing]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/LabelMapSmoothing|Label Map Smoothing]]    <small>(cli, built-in)</small>
 +
* [[Documentation/4.4/Extensions/IASEM|Label Object Statistics]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 +
* [[Documentation/4.4/Extensions/Reporting|Label To DICOMSEGConverter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 +
* [[Documentation/4.4/Modules/LandmarkRegistration|Landmark Registration]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
* [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 +
* [[Documentation/4.4/Modules/LASegmentationWorkflow|LASegmentation Workflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 +
* [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 +
* [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 +
* [[Documentation/4.4/Extensions/MarginCalculator|Margin Calculator]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
 +
* [[Documentation/4.4/Modules/Markups|Markups]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/MaskScalarVolume|Mask Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MaskScalarVolume|Mask Scalar Volume]]    <small>(cli, built-in)</small>
* [[Documentation/4.4/Modules/MatlabCommander|Matlab Commander]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
 
* [[Documentation/4.4/Modules/MedianImageFilter|Median Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MedianImageFilter|Median Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MergeModels|Merge Models]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MergeModels|Merge Models]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Merge Stat With Fiber]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Merge Stat With Fiber]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Modules/MeshCompression|Mesh Compression]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Modules/MeshCompression|Mesh Compression]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 +
* [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/MeshStatistics Mesh Statistics]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/MeshStatistics Mesh Statistics Extension] extension)</small>
 
* [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]] extension)</small>
 
* [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]] extension)</small>
 +
* [[Documentation/4.4/Extensions/MultidimData|Metafile Importer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Modules/ModelMaker|Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ModelMaker|Model Maker]]    <small>(cli, built-in)</small>
 +
* [[Documentation/4.4/Extensions/SlicerIGT|Model Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 +
* [[Documentation/4.4/Modules/Models|Models]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/ModelToLabelMap|Model To Label Map]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ModelToLabelMap|Model To Label Map]]    <small>(cli, built-in)</small>
 +
* [[Documentation/4.4/Extensions/ModelToModelDistance|Model To Model Distance]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ModelToModelDistance|Model To Model Distance]] extension)</small>
 +
* [[Documentation/4.4/Extensions/MarginCalculator|Motion Simulator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
 +
* [[Documentation/4.4/Extensions/MarginCalculator|Motion Simulator Double Array]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
 
* [[Documentation/4.4/Modules/MultiplyScalarVolumes|Multiply Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiplyScalarVolumes|Multiply Scalar Volumes]]    <small>(cli, built-in)</small>
 +
* [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
 +
* [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]]    <small>(cli, built-in)</small>
 +
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
* [[Documentation/4.4/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 +
* [[Documentation/4.4/Modules/OpenIGTLinkIF|Open IGTLink IF]]    <small>(loadable, built-in)</small>
 +
* [[Documentation/4.4/Modules/OpenIGTLinkRemote|Open IGTLink Remote]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/OrientScalarVolume|Orient Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/OrientScalarVolume|Orient Scalar Volume]]    <small>(cli, built-in)</small>
* [[Documentation/4.4/Modules/OtsuThresholdImageFilter|Otsu Threshold Image Filter]]    <small>(cli, built-in)</small>
+
* [[Documentation/4.4/Modules/PathExplorer|Path Explorer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small>
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small>
 +
* [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small>
 
* Perform Metric Test    <small>(cli, built-in)</small>
 
* Perform Metric Test    <small>(cli, built-in)</small>
 +
* [[Documentation/4.4/Modules/PerkEvaluator|Perk Evaluator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 +
* [[Documentation/4.4/Extensions/PET-IndiC|PETIndi C]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 +
* [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]] extension)</small>
 +
* [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/PickAndPaint Pick And Paint]    <small>(scripted, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/PickAndPaint Pick And Paint Extension] extension)</small>
 +
* [[Documentation/4.4/Extensions/SlicerIGT|Pivot Calibration]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small>
 
* [[Documentation/4.4/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small>
 +
* [[Documentation/4.4/Extensions/SlicerRT|Planar Image]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer bspline]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer bspline]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer landwarp]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer landwarp]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
* [[Documentation/4.4/Modules/ProbeVolumeWithModel|Probe Volume With Model]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/PET-IndiC|Quantitative Indices CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Modules/ResampleDTIVolume|Resample DTIVolume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ResampleScalarVectorDWIVolume|Resample Scalar Vector DWIVolume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ResampleScalarVolume|Resample Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
* [[Documentation/4.4/Modules/SimpleRegionGrowingSegmentation|Simple Region Growing Segmentation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SobolevSegmenter|Sobolev Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Spacing Aware Curvature Diffusion]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Modules/SubtractScalarVolumes|Subtract Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
* [[Documentation/4.4/Modules/SwissSkullStripper|Swiss Skull Stripper]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]] extension)</small>
 
* Test Grid Transform Registration    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ThresholdScalarVolume|Threshold Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* VBRAINSDemon Warp    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/VotingBinaryHoleFillingImageFilter|Voting Binary Hole Filling Image Filter]]    <small>(cli, built-in)</small>
 
== loadable ==
 
* [[Documentation/4.4/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Beams]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Breach Warning]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/Cameras|Cameras]]    <small>(loadable, built-in)</small>
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
* [[Documentation/4.4/Modules/CollectFiducials|Collect Fiducials]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/Colors|Colors]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/ContourComparison|Contour Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ContourMorphology|Contour Morphology]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Contours|Contours]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Create Models]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/CropVolume|Crop Volume]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Data|Data]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/DataStore|Data Store]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/DiceComputation|Dice Computation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomRtExport|Dicom Rt Export]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomRtImport|Dicom Rt Import]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomSroImport|Dicom Sro Import]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseAccumulation|Dose Accumulation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseComparison|Dose Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseVolumeHistogram|Dose Volume Histogram]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* Double Arrays    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/EMSegment|EMSegment]]    <small>(loadable, built-in)</small>
 
* EMSegment Quick    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/FastGrowCut|Fast Grow Cut]]    <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small>
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Fiducial Registration Wizard]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo]    <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
* [[Documentation/4.4/Modules/Isodose|Isodose]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/4.4/Modules/Markups|Markups]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MatlabModuleGenerator|Matlab Module Generator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Metafile Importer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Modules/Models|Models]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/OpenIGTLinkIF|Open IGTLink IF]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/OpenIGTLinkRemote|Open IGTLink Remote]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/PathExplorer|Path Explorer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/PerkEvaluator|Perk Evaluator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Pivot Calibration]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Planar Image]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
 
* [[Documentation/4.4/Extensions/SlicerRT|Plastimatch Py]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Plastimatch Py]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
* [[Documentation/4.4/Modules/Reformat|Reformat]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Extensions/Reporting|Reporting]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 
* [[Documentation/4.4/Modules/SceneViews|Scene Views]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequence Browser]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequences]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Modules/SubjectHierarchy|Subject Hierarchy]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/TrackerStabilizer|Tracker Stabilizer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small>
 
* [[Documentation/4.4/Modules/TractographyDisplay|Tractography Display]]    <small>(loadable, built-in)</small>
 
* Tractography Interactive Seeding    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Transform Fusion]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/TransformRecorder|Transform Recorder]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Ultrasound Snapshots]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/Units|Units]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Vff File Reader]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/VolumeResliceDriver|Volume Reslice Driver]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/Volumes|Volumes]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Watchdog]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/Welcome|Welcome]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/WorkflowSegmentation|Workflow Segmentation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
== scripted ==
 
* [[Documentation/4.4/Extensions/SlicerRT|Batch Contour Conversion]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Binary Watershed Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures]    <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] extension)</small>
 
* [http://slicer.vmtk.org/ Centerline Computation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/4.4/Modules/ChangeTracker|Change Tracker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
* Charting    <small>(scripted, built-in)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/CompareVolumes|Compare Volumes]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
* [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]] extension)</small>
 
* [[Documentation/4.4/Modules/DataProbe|Data Probe]]    <small>(scripted, built-in)</small>
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DeveloperToolsForExtensions Developer Tools For Extensions]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DeveloperToolsForExtensions Developer Tools For Extensions] extension)</small>
 
* [[Documentation/4.4/Modules/DICOM|DICOM]]    <small>(scripted, built-in)</small>
 
* DICOM2Full Brain Tractography    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/DicomSroExport|Dicom Sro Export]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Double Threshold Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Dvh Comparison]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Endoscopy|Endoscopy]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/ExtensionWizard|Extension Wizard]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Fiducials To Model Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
* [[Documentation/4.4/Modules/GyroGuide|Gyro Guide]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]] extension)</small>
 
* [[Documentation/4.4/Modules/HeterogeneityCAD|Heterogeneity CAD]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small>
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter KUtil]    <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Label Object Statistics]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/Reporting|Label To DICOMSEGConverter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 
* [[Documentation/4.4/Modules/LandmarkRegistration|Landmark Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LASegmentationWorkflow|LASegmentation Workflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Model Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
* [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small>
 
* [[Documentation/4.4/Extensions/PET-IndiC|PETIndi C]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Modules/PETTumorSegmentationEffect|PETTumor Segmentation Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]] extension)</small>
 
 
* [[Documentation/4.4/Extensions/SlicerRT|Plm Register]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Plm Register]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/PlusRemote|Plus Remote]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/PlusRemote|Plus Remote]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/PortPlacement|Port Placement]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PortPlacement|Port Placement]] extension)</small>
 
* [[Documentation/4.4/Modules/PortPlacement|Port Placement]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PortPlacement|Port Placement]] extension)</small>
* [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] extension)</small>
+
* [[Documentation/4.4/Modules/ProbeVolumeWithModel|Probe Volume With Model]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Extensions/PerkTutor|Python Metrics Calculator]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Extensions/PerkTutor|Python Metrics Calculator]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 +
* [[Documentation/4.4/Extensions/Q3DC|Q3DC]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Q3DC|Q3DC]] extension)</small>
 +
* [[Documentation/4.4/Modules/QuantitativeIndicesCLI|Quantitative Indices CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Extensions/PET-IndiC|Quantitative Indices Tool]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Extensions/PET-IndiC|Quantitative Indices Tool]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
* [[Documentation/4.4/Modules/ResectionVolume|Resection Volume]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ResectionPlanner|Resection Planner]] extension)</small>
 
* [[Documentation/4.4/Modules/SampleData|Sample Data]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/ScarVisualization|Scar Visualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* Scene Performance    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Extensions/Scoliosis|Scoliosis Monitoring]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
* [[Documentation/4.4/Modules/SegmentCAD|Segment CAD]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small>
 
* [[Documentation/4.4/Modules/SimpleFilters|Simple Filters]]    <small>(scripted, built-in)</small>
 
* Slice Link Logic    <small>(scripted, built-in)</small>
 
* Slicer4Minute    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small>
 
* [[Documentation/4.4/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
* [[Documentation/4.4/Extensions/CMFreg|Surface Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/SurfaceToolbox|Surface Toolbox]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] extension)</small>
 
* [[Documentation/4.4/Modules/ThingiverseBrowser|Thingiverse Browser]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ThingiverseBrowser|Thingiverse Browser]] extension)</small>
 
* [[Documentation/4.4/Modules/VectorToScalarVolume|Vector To Scalar Volume]]    <small>(scripted, built-in)</small>
 
* [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Model]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small>
 
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Roi]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small>
 
* Volume Rendering Scene Close    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small>
 
* [[Documentation/4.4/Extensions/XNATSlicer|Xnat Slicer]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] extension)</small>
 
= Modules by extension =
 
58 extensions:
 
* [[#ABC|ABC]]
 
* [[#AirwaySegmentation|Airway Segmentation]]
 
* [[#builtin|builtin]]
 
* [[#Cardiac_MRI_Toolkit|Cardiac MRI Toolkit]]
 
* [[#CardiacAgastonMeasures|Cardiac Agaston Measures]]
 
* [[#CarreraSlice|Carrera Slice]]
 
* [[#CBC_3D_I2MConversion|CBC 3D I2MConversion]]
 
* [[#ChangeTracker|Change Tracker]]
 
* [[#CleaverExtension|Cleaver Extension]]
 
* [[#CMFreg|CMFreg]]
 
* [[#CornerAnnotation|Corner Annotation]]
 
* [[#CurveMaker|Curve Maker]]
 
* [[#DeveloperToolsForExtensions|Developer Tools For Extensions]]
 
* [[#DiceComputation|Dice Computation]]
 
* [[#DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]
 
* [[#ErodeDilateLabel|Erode Dilate Label]]
 
* [[#FastGrowCutEffect|Fast Grow Cut Effect]]
 
* [[#FinslerTractography|Finsler Tractography]]
 
* [[#GelDosimetryAnalysis|Gel Dosimetry Analysis]]
 
* [[#GyroGuide|Gyro Guide]]
 
* [[#IASEM|IASEM]]
 
* [[#iGyne|i Gyne]]
 
* [[#ImageMaker|Image Maker]]
 
* [[#IntensitySegmenter|Intensity Segmenter]]
 
* [[#LAScarSegmenter|LAScar Segmenter]]
 
* [[#LongitudinalPETCT|Longitudinal PETCT]]
 
* [[#MABMIS|MABMIS]]
 
* [[#MatlabBridge|Matlab Bridge]]
 
* [[#MeshToLabelMap|Mesh To Label Map]]
 
* [[#MultidimData|Multidim Data]]
 
* [[#NeedleFinder|Needle Finder]]
 
* [[#OpenCAD|Open CAD]]
 
* [[#PBNRR|PBNRR]]
 
* [[#PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]
 
* [[#PerkTutor|Perk Tutor]]
 
* [[#PET-IndiC|PET-Indi C]]
 
* [[#PETDICOMExtension|PETDICOMExtension]]
 
* [[#PETTumorSegmentation|PETTumor Segmentation]]
 
* [[#PkModeling|Pk Modeling]]
 
* [[#PortPlacement|Port Placement]]
 
* [[#PyDevRemoteDebug|Py Dev Remote Debug]]
 
* [[#Reporting|Reporting]]
 
* [[#ResectionPlanner|Resection Planner]]
 
* [[#Scoliosis|Scoliosis]]
 
* [[#SegmentationAidedRegistration|Segmentation Aided Registration]]
 
* [[#SlicerExtension-VMTK|VMTK]]
 
* [[#SlicerIGT|Slicer IGT]]
 
* [[#SlicerRT|Slicer RT]]
 
* [[#SlicerToKiwiExporter|Slicer To Kiwi Exporter]]
 
* [[#SobolevSegmenter|Sobolev Segmenter]]
 
* [[#SwissSkullStripper|Swiss Skull Stripper]]
 
* [[#TCIABrowser|TCIABrowser]]
 
* [[#ThingiverseBrowser|Thingiverse Browser]]
 
* [[#TrackerStabilizer|Tracker Stabilizer]]
 
* [[#UKFTractography|UKFTractography]]
 
* [[#VolumeClip|Volume Clip]]
 
* [[#WindowLevelEffect|Window Level Effect]]
 
* [[#XNATSlicer|XNATSlicer]]
 
== ABC ==
 
* [http://www.nitrc.org/projects/abc ABC]    <small>(cli, bundled in [http://www.nitrc.org/projects/abc ABC] extension)</small>
 
== AirwaySegmentation ==
 
* [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation]] extension)</small>
 
== builtin ==
 
* [[Documentation/4.4/Modules/ACPCTransform|ACPCTransform]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/AddScalarVolumes|Add Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Annotations|Annotations]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/BRAINSDemonWarp|BRAINSDemon Warp]]    <small>(cli, built-in)</small>
 
* BRAINSDWICleanup    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/BRAINSFit|BRAINSFit]]    <small>(cli, built-in)</small>
 
* BRAINSLabel Stats    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/BRAINSResample|BRAINSResample]]    <small>(cli, built-in)</small>
 
* BRAINSResize    <small>(cli, built-in)</small>
 
* BRAINSROIAuto    <small>(cli, built-in)</small>
 
* BRAINSStrip Rotation    <small>(cli, built-in)</small>
 
* BRAINSTransform Convert    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/BSplineToDeformationField|BSpline To Deformation Field]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Cameras|Cameras]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/CastScalarVolume|Cast Scalar Volume]]    <small>(cli, built-in)</small>
 
* Charting    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/CheckerBoardFilter|Checker Board Filter]]    <small>(cli, built-in)</small>
 
* CLIROITest    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Colors|Colors]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/CreateDICOMSeries|Create DICOMSeries]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/CropVolume|Crop Volume]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/CurvatureAnisotropicDiffusion|Curvature Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Data|Data]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/DataProbe|Data Probe]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/DataStore|Data Store]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/DICOM|DICOM]]    <small>(scripted, built-in)</small>
 
* DICOM2Full Brain Tractography    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/DiffusionTensorScalarMeasurements|Diffusion Tensor Scalar Measurements]]    <small>(cli, built-in)</small>
 
* Diffusion Tensor Test    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DiffusionWeightedVolumeMasking|Diffusion Weighted Volume Masking]]    <small>(cli, built-in)</small>
 
* Double Arrays    <small>(loadable, built-in)</small>
 
* DTIexport    <small>(cli, built-in)</small>
 
* DTIimport    <small>(cli, built-in)</small>
 
* DWIConvert    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIJointRicianLMMSEFilter|DWIJoint Rician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIRicianLMMSEFilter|DWIRician LMMSEFilter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIToDTIEstimation|DWITo DTIEstimation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/DWIUnbiasedNonLocalMeansFilter|DWIUnbiased Non Local Means Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/EMSegment|EMSegment]]    <small>(loadable, built-in)</small>
 
* EMSegment Command Line    <small>(cli, built-in)</small>
 
* EMSegment Quick    <small>(loadable, built-in)</small>
 
* EMSegment Transform To New Format    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Endoscopy|Endoscopy]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/ExecutionModelTour|Execution Model Tour]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ExpertAutomatedRegistration|Expert Automated Registration]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ExtensionWizard|Extension Wizard]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/ExtractSkeleton|Extract Skeleton]]    <small>(cli, built-in)</small>
 
* Fiber Bundle Label Select    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/FiberBundleToLabelMap|Fiber Bundle To Label Map]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/FiducialRegistration|Fiducial Registration]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GaussianBlurImageFilter|Gaussian Blur Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GradientAnisotropicDiffusion|Gradient Anisotropic Diffusion]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleFillHoleImageFilter|Grayscale Fill Hole Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleGrindPeakImageFilter|Grayscale Grind Peak Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/GrayscaleModelMaker|Grayscale Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/HistogramMatching|Histogram Matching]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ImageLabelCombine|Image Label Combine]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/LabelMapSmoothing|Label Map Smoothing]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Markups|Markups]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MaskScalarVolume|Mask Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MedianImageFilter|Median Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MergeModels|Merge Models]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ModelMaker|Model Maker]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/Models|Models]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/ModelToLabelMap|Model To Label Map]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiplyScalarVolumes|Multiply Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeExplorer|Multi Volume Explorer]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/MultiVolumeImporter|Multi Volume Importer]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/N4ITKBiasFieldCorrection|N4ITKBias Field Correction]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/OpenIGTLinkIF|Open IGTLink IF]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/OrientScalarVolume|Orient Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/OtsuThresholdImageFilter|Otsu Threshold Image Filter]]    <small>(cli, built-in)</small>
 
* Perform Metric Test    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/PETStandardUptakeValueComputation|PETStandard Uptake Value Computation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ProbeVolumeWithModel|Probe Volume With Model]]    <small>(cli, built-in)</small>
 
 
* [[Documentation/4.4/Modules/Reformat|Reformat]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Reformat|Reformat]]    <small>(loadable, built-in)</small>
 +
* [[Documentation/4.4/Extensions/Reporting|Reporting]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 +
* [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/ResampleDTIlogEuclidean Resample DTIlog Euclidean]    <small>(cli, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/ResampleDTIlogEuclidean Resample DTIlog Euclidean] extension)</small>
 
* [[Documentation/4.4/Modules/ResampleDTIVolume|Resample DTIVolume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ResampleDTIVolume|Resample DTIVolume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ResampleScalarVectorDWIVolume|Resample Scalar Vector DWIVolume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ResampleScalarVectorDWIVolume|Resample Scalar Vector DWIVolume]]    <small>(cli, built-in)</small>
* [[Documentation/4.4/Modules/ResampleScalarVolume|Resample Scalar Volume]]    <small>(cli, built-in)</small>
+
* [[Documentation/4.4/Modules/ResectionVolume|Resection Volume]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ResectionPlanner|Resection Planner]] extension)</small>
 
* [[Documentation/4.4/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/RobustStatisticsSegmenter|Robust Statistics Segmenter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SampleData|Sample Data]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/SampleData|Sample Data]]    <small>(scripted, built-in)</small>
* Scene Performance   <small>(scripted, built-in)</small>
+
* [[Documentation/4.4/Modules/ScarVisualization|Scar Visualization]]   <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/SceneViews|Scene Views]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/SceneViews|Scene Views]]    <small>(loadable, built-in)</small>
 +
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 +
* [[Documentation/4.4/Modules/SegmentCAD|Segment CAD]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small>
 +
* [[Documentation/4.4/Extensions/MultidimData|Sequence Browser]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 +
* [[Documentation/4.4/Extensions/MultidimData|Sequences]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Modules/SimpleFilters|Simple Filters]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/SimpleFilters|Simple Filters]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/SimpleRegionGrowingSegmentation|Simple Region Growing Segmentation]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SimpleRegionGrowingSegmentation|Simple Region Growing Segmentation]]    <small>(cli, built-in)</small>
* Slice Link Logic   <small>(scripted, built-in)</small>
+
* [[Documentation/4.4/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]   <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small>
* Slicer4Minute   <small>(scripted, built-in)</small>
+
* [[Documentation/4.4/Modules/SobolevSegmenter|Sobolev Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]] extension)</small>
 +
* [[Documentation/4.4/Extensions/IASEM|Spacing Aware Curvature Diffusion]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 +
* [[Documentation/4.4/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]]   <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
* [[Documentation/4.4/Modules/SubjectHierarchy|Subject Hierarchy]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/SubjectHierarchy|Subject Hierarchy]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/SubtractScalarVolumes|Subtract Scalar Volumes]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/SubtractScalarVolumes|Subtract Scalar Volumes]]    <small>(cli, built-in)</small>
 +
* [[Documentation/4.4/Modules/SurfaceRegistration|Surface Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/SurfaceToolbox|Surface Toolbox]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/SurfaceToolbox|Surface Toolbox]]    <small>(scripted, built-in)</small>
* Test Grid Transform Registration   <small>(cli, built-in)</small>
+
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]   <small>(cli, bundled in [http://www.slicer.org/wiki/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 +
* [[Documentation/4.4/Modules/SwissSkullStripper|Swiss Skull Stripper]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]] extension)</small>
 +
* [[Documentation/4.4/Extensions/MarginCalculator|Synthetic RTDose]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/MarginCalculator|Margin Calculator]] extension)</small>
 +
* [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] extension)</small>
 +
* [[Documentation/4.4/Modules/ThingiverseBrowser|Thingiverse Browser]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ThingiverseBrowser|Thingiverse Browser]] extension)</small>
 
* [[Documentation/4.4/Modules/ThresholdScalarVolume|Threshold Scalar Volume]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/ThresholdScalarVolume|Threshold Scalar Volume]]    <small>(cli, built-in)</small>
 +
* [[Documentation/4.4/Modules/TrackerStabilizer|Tracker Stabilizer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small>
 
* [[Documentation/4.4/Modules/TractographyDisplay|Tractography Display]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/TractographyDisplay|Tractography Display]]    <small>(loadable, built-in)</small>
 
* Tractography Interactive Seeding    <small>(loadable, built-in)</small>
 
* Tractography Interactive Seeding    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/TractographyLabelMapSeeding|Tractography Label Map Seeding]]    <small>(cli, built-in)</small>
 +
* [[Documentation/4.4/Extensions/SlicerIGT|Transform Fusion]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 +
* [[Documentation/4.4/Modules/TransformRecorder|Transform Recorder]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Transforms|Transforms]]    <small>(loadable, built-in)</small>
 +
* [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 +
* [[Documentation/4.4/Extensions/SlicerIGT|Ultrasound Snapshots]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/Units|Units]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Units|Units]]    <small>(loadable, built-in)</small>
 
* VBRAINSDemon Warp    <small>(cli, built-in)</small>
 
* VBRAINSDemon Warp    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/VectorToScalarVolume|Vector To Scalar Volume]]    <small>(scripted, built-in)</small>
 
* [[Documentation/4.4/Modules/VectorToScalarVolume|Vector To Scalar Volume]]    <small>(scripted, built-in)</small>
 +
* [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 +
* [[Documentation/4.4/Extensions/SlicerRT|Vff File Reader]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/ViewControllers|View Controllers]]    <small>(loadable, built-in)</small>
 +
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Model]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small>
 +
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Roi]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small>
 
* [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/VolumeRendering|Volume Rendering]]    <small>(loadable, built-in)</small>
* Volume Rendering Scene Close   <small>(scripted, built-in)</small>
+
* [[Documentation/4.4/Modules/VolumeResliceDriver|Volume Reslice Driver]]   <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/Volumes|Volumes]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Volumes|Volumes]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/VotingBinaryHoleFillingImageFilter|Voting Binary Hole Filling Image Filter]]    <small>(cli, built-in)</small>
 
* [[Documentation/4.4/Modules/VotingBinaryHoleFillingImageFilter|Voting Binary Hole Filling Image Filter]]    <small>(cli, built-in)</small>
 +
* [https://github.com/Tomnl/Slicer-Wasp Wasp]    <small>(scripted, bundled in [https://github.com/Tomnl/Slicer-Wasp Wasp] extension)</small>
 +
* [[Documentation/4.4/Extensions/SlicerIGT|Watchdog]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/Welcome|Welcome]]    <small>(loadable, built-in)</small>
 
* [[Documentation/4.4/Modules/Welcome|Welcome]]    <small>(loadable, built-in)</small>
== Cardiac_MRI_Toolkit ==
+
* [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small>
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Automatic Left Atrial Scar]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Axial Dilate]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Boolean REMOVEFilter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Connected Threshold Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Inhomogeneity Correction]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Isolated Connected Filter]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit PVAntrum Cut]    <small>(cli, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Registration BRAINSFit]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ CMRToolkit Wizard]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/LASegmentationWorkflow|LASegmentation Workflow]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
* [[Documentation/4.4/Modules/ScarVisualization|Scar Visualization]]    <small>(scripted, bundled in [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit] extension)</small>
 
== CardiacAgastonMeasures ==
 
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agatston Measures]    <small>(scripted, bundled in [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures] extension)</small>
 
== CarreraSlice ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Fast Grow Cut Segmenter]    <small>(loadable, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter KUtil]    <small>(scripted, bundled in [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice] extension)</small>
 
== CBC_3D_I2MConversion ==
 
* [[Documentation/4.4/Modules/BodyCentricCubicMesh|Body Centric Cubic Mesh]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
* [[Documentation/4.4/Modules/MeshCompression|Mesh Compression]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]] extension)</small>
 
== ChangeTracker ==
 
* [[Documentation/4.4/Modules/ChangeTracker|Change Tracker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
* [[Documentation/4.4/Modules/IntensityDifferenceMetric|Intensity Difference Metric]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]] extension)</small>
 
== CleaverExtension ==
 
* [[Documentation/4.4/Extensions/CleaverExtension|Cleaver CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]] extension)</small>
 
== CMFreg ==
 
* [[Documentation/4.4/Extensions/CMFreg|Apply Matrix]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/CompareVolumes|Compare Volumes]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/Downsize|Downsize]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/Growing|Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelAddition|Label Addition]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LabelExtraction|Label Extraction]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/LandmarkRegistration|Landmark Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/MaskCreation|Mask Creation]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Modules/NonGrowing|Non Growing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
* [[Documentation/4.4/Extensions/CMFreg|Surface Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CMFreg|CMFreg]] extension)</small>
 
== CornerAnnotation ==
 
* [[Documentation/4.4/Modules/CornerAnnotation|Corner Annotation]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]] extension)</small>
 
== CurveMaker ==
 
* [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]] extension)</small>
 
== DeveloperToolsForExtensions ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DeveloperToolsForExtensions Developer Tools For Extensions]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DeveloperToolsForExtensions Developer Tools For Extensions] extension)</small>
 
== DiceComputation ==
 
* [[Documentation/4.4/Modules/DiceComputation|Dice Computation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]] extension)</small>
 
== DTIAtlasFiberAnalyzer ==
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|dtitractstat]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Fiber Compare]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|Merge Stat With Fiber]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]] extension)</small>
 
== ErodeDilateLabel ==
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Dilate Label]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Label]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]] extension)</small>
 
== FastGrowCutEffect ==
 
* [[Documentation/4.4/Modules/FastGrowCut|Fast Grow Cut]]    <small>(loadable, bundled in [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect] extension)</small>
 
== FinslerTractography ==
 
* [[Documentation/4.4/Modules/FinslerBacktracing|Finsler Backtracing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
* [[Documentation/4.4/Modules/FinslerTractography|Finsler Tractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]] extension)</small>
 
== GelDosimetryAnalysis ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]    <small>(scripted, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis Algo]    <small>(loadable, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis] extension)</small>
 
== GyroGuide ==
 
* [[Documentation/4.4/Modules/GyroGuide|Gyro Guide]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]] extension)</small>
 
== IASEM ==
 
* [[Documentation/4.4/Extensions/IASEM|Binary Watershed Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Bin Shrink]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Double Threshold Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|IASEMImport]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|IASEMImport Series]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Label Object Statistics]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
* [[Documentation/4.4/Extensions/IASEM|Spacing Aware Curvature Diffusion]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IASEM|IASEM]] extension)</small>
 
== iGyne ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/iGyne|i Gyne]] extension)</small>
 
== ImageMaker ==
 
* [[Documentation/4.4/Extensions/ImageMaker|Image Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/ImageMaker|Image Maker]] extension)</small>
 
== IntensitySegmenter ==
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]] extension)</small>
 
== LAScarSegmenter ==
 
* [[Documentation/4.4/Modules/LAScarSegmenter|LAScar Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]] extension)</small>
 
== LongitudinalPETCT ==
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|PETSUVImage Maker]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]] extension)</small>
 
== MABMIS ==
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Testing]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
 
* [[Documentation/4.4/Extensions/MABMIS|IGR3D MABMIS Training]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MABMIS|MABMIS]] extension)</small>
 
== MatlabBridge ==
 
* [[Documentation/4.4/Modules/MatlabCommander|Matlab Commander]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
* [[Documentation/4.4/Modules/MatlabModuleGenerator|Matlab Module Generator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]] extension)</small>
 
== MeshToLabelMap ==
 
* [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]] extension)</small>
 
== MultidimData ==
 
* [[Documentation/4.4/Extensions/MultidimData|Metafile Importer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequence Browser]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
* [[Documentation/4.4/Extensions/MultidimData|Sequences]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/MultidimData|Multidim Data]] extension)</small>
 
== NeedleFinder ==
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]] extension)</small>
 
== OpenCAD ==
 
* [[Documentation/4.4/Modules/HeterogeneityCAD|Heterogeneity CAD]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small>
 
* [[Documentation/4.4/Modules/SegmentCAD|Segment CAD]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/OpenCAD|Open CAD]] extension)</small>
 
== PBNRR ==
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PBNRR|PBNRR]] extension)</small>
 
== PercutaneousApproachAnalysis ==
 
* [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]] extension)</small>
 
== PerkTutor ==
 
* [[Documentation/4.4/Modules/PerkEvaluator|Perk Evaluator]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Extensions/PerkTutor|Python Metrics Calculator]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Modules/TransformRecorder|Transform Recorder]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
 
* [[Documentation/4.4/Modules/WorkflowSegmentation|Workflow Segmentation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
 
* [[Documentation/4.4/Modules/WorkflowSegmentation|Workflow Segmentation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]] extension)</small>
== PET-IndiC ==
 
* [[Documentation/4.4/Extensions/PET-IndiC|PETIndi C]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Extensions/PET-IndiC|Quantitative Indices CLI]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
* [[Documentation/4.4/Extensions/PET-IndiC|Quantitative Indices Tool]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]] extension)</small>
 
== PETDICOMExtension ==
 
* [[Documentation/4.4/Modules/SUVFactorCalculator|SUVFactor Calculator]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension] extension)</small>
 
== PETTumorSegmentation ==
 
* [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]] extension)</small>
 
* [[Documentation/4.4/Modules/PETTumorSegmentationEffect|PETTumor Segmentation Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]] extension)</small>
 
== PkModeling ==
 
* [[Documentation/4.4/Modules/PkModeling|Pk Modeling]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]] extension)</small>
 
== PortPlacement ==
 
* [[Documentation/4.4/Modules/PortPlacement|Port Placement]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PortPlacement|Port Placement]] extension)</small>
 
== PyDevRemoteDebug ==
 
* [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]] extension)</small>
 
== Reporting ==
 
* [[Documentation/4.4/Extensions/Reporting|Label To DICOMSEGConverter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 
* [[Documentation/4.4/Extensions/Reporting|Reporting]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/Reporting|Reporting]] extension)</small>
 
== ResectionPlanner ==
 
* [[Documentation/4.4/Modules/ResectionVolume|Resection Volume]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ResectionPlanner|Resection Planner]] extension)</small>
 
== Scoliosis ==
 
* [[Documentation/4.4/Extensions/Scoliosis|Scoliosis Monitoring]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
* [[Documentation/4.4/Modules/SpinalCurvatureMeasurement|Spinal Curvature Measurement]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]] extension)</small>
 
== SegmentationAidedRegistration ==
 
* [[Documentation/4.4/Modules/SegmentationAidedRegistration|Segmentation Aided Registration]]    <small>(cli, bundled in [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration] extension)</small>
 
== SlicerExtension-VMTK ==
 
* [http://slicer.vmtk.org/ Centerline Computation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [http://slicer.vmtk.org/ Level Set Segmentation]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
* [http://slicer.vmtk.org/ Vesselness Filtering]    <small>(scripted, bundled in [http://slicer.vmtk.org/ VMTK] extension)</small>
 
== SlicerIGT ==
 
* [[Documentation/4.4/Extensions/SlicerIGT|Breach Warning]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/CollectFiducials|Collect Fiducials]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Create Models]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Fiducial Registration Wizard]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Fiducials To Model Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Model Registration]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/OpenIGTLinkRemote|Open IGTLink Remote]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/PathExplorer|Path Explorer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Pivot Calibration]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/PlusRemote|Plus Remote]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Transform Fusion]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Ultrasound Snapshots]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Modules/VolumeResliceDriver|Volume Reslice Driver]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerIGT|Watchdog]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]] extension)</small>
 
== SlicerRT ==
 
* [[Documentation/4.4/Extensions/SlicerRT|Batch Contour Conversion]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Beams]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ContourComparison|Contour Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/ContourMorphology|Contour Morphology]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Contours|Contours]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomRtExport|Dicom Rt Export]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomRtImport|Dicom Rt Import]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomSroExport|Dicom Sro Export]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DicomSroImport|Dicom Sro Import]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseAccumulation|Dose Accumulation]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseComparison|Dose Comparison]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/DoseVolumeHistogram|Dose Volume Histogram]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Dvh Comparison]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Modules/Isodose|Isodose]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Planar Image]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer bspline]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|plastimatch slicer landwarp]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Plastimatch Py]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Plm Register]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
* [[Documentation/4.4/Extensions/SlicerRT|Vff File Reader]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]] extension)</small>
 
== SlicerToKiwiExporter ==
 
* [[Documentation/4.4/Modules/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]] extension)</small>
 
== SobolevSegmenter ==
 
* [[Documentation/4.4/Modules/SobolevSegmenter|Sobolev Segmenter]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]] extension)</small>
 
== SwissSkullStripper ==
 
* [[Documentation/4.4/Modules/SwissSkullStripper|Swiss Skull Stripper]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]] extension)</small>
 
== TCIABrowser ==
 
* [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]] extension)</small>
 
== ThingiverseBrowser ==
 
* [[Documentation/4.4/Modules/ThingiverseBrowser|Thingiverse Browser]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/ThingiverseBrowser|Thingiverse Browser]] extension)</small>
 
== TrackerStabilizer ==
 
* [[Documentation/4.4/Modules/TrackerStabilizer|Tracker Stabilizer]]    <small>(loadable, bundled in [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]] extension)</small>
 
== UKFTractography ==
 
* [[Documentation/4.4/Extensions/UKFTractography|Convert VTK]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
* [[Documentation/4.4/Modules/UKFTractography|UKFTractography]]    <small>(cli, bundled in [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]] extension)</small>
 
== VolumeClip ==
 
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Model]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small>
 
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip With Roi]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]] extension)</small>
 
== WindowLevelEffect ==
 
* [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]] extension)</small>
 
== XNATSlicer ==
 
* [[Documentation/4.4/Extensions/XNATSlicer|Xnat Slicer]]    <small>(scripted, bundled in [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]] extension)</small>
 
= Extensions by name =
 
57 extensions:
 
* [http://www.nitrc.org/projects/abc ABC]
 
* [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation]]
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit]
 
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures]
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
* [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]]
 
* [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]]
 
* [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]]
 
* [[Documentation/4.4/Extensions/CMFreg|CMFreg]]
 
* [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]]
 
* [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DeveloperToolsForExtensions Developer Tools For Extensions]
 
* [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]]
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]]
 
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect]
 
* [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]
 
* [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]]
 
* [[Documentation/4.4/Extensions/IASEM|IASEM]]
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]
 
* [[Documentation/4.4/Extensions/ImageMaker|Image Maker]]
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]
 
* [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]]
 
* [[Documentation/4.4/Extensions/MABMIS|MABMIS]]
 
* [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]]
 
* [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]]
 
* [[Documentation/4.4/Extensions/MultidimData|Multidim Data]]
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]
 
* [[Documentation/4.4/Extensions/OpenCAD|Open CAD]]
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]
 
* [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]
 
* [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]]
 
* [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension]
 
* [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]]
 
* [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]]
 
* [[Documentation/4.4/Extensions/PortPlacement|Port Placement]]
 
* [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]]
 
* [[Documentation/4.4/Extensions/Reporting|Reporting]]
 
* [[Documentation/4.4/Extensions/ResectionPlanner|Resection Planner]]
 
* [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
* [http://slicer.vmtk.org/ VMTK]
 
* [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]]
 
* [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]]
 
* [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]
 
* [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]]
 
* [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]]
 
* [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]]
 
* [[Documentation/4.4/Extensions/ThingiverseBrowser|Thingiverse Browser]]
 
* [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]]
 
* [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]]
 
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]]
 
* [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]]
 
* [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]]
 
= Extensions by category =
 
25 categories:
 
* [[#Cardiac|Cardiac]]
 
* [[#Cardiac_MRI_toolkit|Cardiac MRI toolkit]]
 
* [[#Converters|Converters]]
 
* [[#Developer_Tools|Developer Tools]]
 
* [[#Diffusion|Diffusion]]
 
* [[#Editor_Effects|Editor Effects]]
 
* [[#Exporter|Exporter]]
 
* [[#Filtering|Filtering]]
 
** [[#Morphology|Morphology]]
 
* [[#IGT|IGT]]
 
* [[#Informatics|Informatics]]
 
* [[#Mesh_Generation|Mesh Generation]]
 
* [[#Microscopy|Microscopy]]
 
* [[#Multidimensional_data|Multidimensional data]]
 
* [[#Quantification|Quantification]]
 
* [[#Radiotherapy|Radiotherapy]]
 
* [[#Registration|Registration]]
 
* [[#Remote|Remote]]
 
* [[#Scoliosis|Scoliosis]]
 
* [[#Segmentation|Segmentation]]
 
* [[#Shape_Analysis|Shape Analysis]]
 
* [[#Tractography|Tractography]]
 
* [[#Training|Training]]
 
* [[#Utilities|Utilities]]
 
* [[#Vascular_Modeling_Toolkit|Vascular Modeling Toolkit]]
 
* [[#Wizards|Wizards]]
 
== Cardiac ==
 
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures]
 
== Cardiac MRI toolkit ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit]
 
== Converters ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension]
 
== Developer Tools ==
 
* [[Documentation/4.4/Extensions/ImageMaker|Image Maker]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DeveloperToolsForExtensions Developer Tools For Extensions]
 
* [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]]
 
* [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]]
 
== Diffusion ==
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]
 
== Editor Effects ==
 
* [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]]
 
== Exporter ==
 
* [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]
 
== Filtering ==
 
=== Morphology ===
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]]
 
== IGT ==
 
* [[Documentation/4.4/Extensions/PortPlacement|Port Placement]]
 
* [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]]
 
* [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]]
 
* [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]
 
* [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]]
 
* [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]]
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]
 
* [[Documentation/4.4/Extensions/ResectionPlanner|Resection Planner]]
 
== Informatics ==
 
* [[Documentation/4.4/Extensions/Reporting|Reporting]]
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]]
 
* [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]]
 
* [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]]
 
== Mesh Generation ==
 
* [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]]
 
* [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]]
 
== Microscopy ==
 
* [[Documentation/4.4/Extensions/IASEM|IASEM]]
 
== Multidimensional data ==
 
* [[Documentation/4.4/Extensions/MultidimData|Multidim Data]]
 
== Quantification ==
 
* [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]]
 
* [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]]
 
* [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]]
 
== Radiotherapy ==
 
* [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]
 
== Registration ==
 
* [[Documentation/4.4/Extensions/CMFreg|CMFreg]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]
 
== Remote ==
 
* [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]]
 
== Scoliosis ==
 
* [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]]
 
== Segmentation ==
 
* [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation]]
 
* [http://www.nitrc.org/projects/abc ABC]
 
* [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]]
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
* [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]]
 
* [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]]
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]
 
* [[Documentation/4.4/Extensions/OpenCAD|Open CAD]]
 
* [[Documentation/4.4/Extensions/MABMIS|MABMIS]]
 
* [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]]
 
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect]
 
== Shape Analysis ==
 
* [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]]
 
== Tractography ==
 
* [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]]
 
* [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]]
 
== Training ==
 
* [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]]
 
== Utilities ==
 
* [[Documentation/4.4/Extensions/ThingiverseBrowser|Thingiverse Browser]]
 
== Vascular Modeling Toolkit ==
 
* [http://slicer.vmtk.org/ VMTK]
 
== Wizards ==
 
* [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]]
 
= Extensions by contributing organization =
 
55 contributing organizations:
 
* [[#Asclepios_INRIA.29_and_Nikos_Chrisochoides_.28CRTC|Asclepios INRIA) and Nikos Chrisochoides (CRTC]]
 
* [[#Boston_Childrens_Hospital|Boston Childrens Hospital]]
 
* [[#Brigham_and_Women_s_Hospital|Brigham and Women's Hospital]]
 
* [[#BWH|BWH]]
 
* [[#BWH___MGH|BWH & MGH]]
 
* [[#BWH.2C_SPL|BWH, SPL]]
 
* [[#BWH.2FUAB|BWH/UAB]]
 
* [[#CARMA|CARMA]]
 
* [[#College_of_Information_Engineering.2C_Zhejiang_University_of_Technology.2C_Hangzhou.2C_China|College of Information Engineering, Zhejiang University of Technology, Hangzhou, China]]
 
* [[#Crisalix|Crisalix]]
 
* [[#CRTC|CRTC]]
 
* [[#Department_of_Neurosurgery.2C_PLA_General_Hospital.2C_Beijing.2C_China|Department of Neurosurgery, PLA General Hospital, Beijing, China]]
 
* [[#Department_of_Orthodontics.2C_UNC|Department of Orthodontics, UNC]]
 
* [[#GE|GE]]
 
* [[#GE_GLobal_Research|GE GLobal Research]]
 
* [[#GT|GT]]
 
* [[#Isomics|Isomics]]
 
* [[#Kitware|Kitware]]
 
* [[#Massachusetts_General_Hospital|Massachusetts General Hospital]]
 
* [[#Moka_Creative_LLC.2C_Washington_University_in_St._Louis|Moka Creative LLC, Washington University in St. Louis]]
 
* [[#NIRAL.2C_UNC|NIRAL, UNC]]
 
* [[#Noware|Noware]]
 
* [[#Orobix|Orobix]]
 
* [[#PerkLab_at_Queen_s_University|Perk Lab at Queen's University]]
 
* [[#PerkLab.2C_Queen_s|Perk Lab, Queen's]]
 
* [[#PerkLab.2C_Queen_s_University|Perk Lab, Queen's University]]
 
* [[#PMH|PMH]]
 
* [[#Queen_s_University|Queen's University]]
 
* [[#Radiation_Medicine_Program.2C_Princess_Margaret_Hospital.2C_University_Health_Network_Toronto|Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto]]
 
* [[#SBU|SBU]]
 
* [[#SCI_Institute|SCI Institute]]
 
* [[#Shiga_University_of_Medical_Science|Shiga University of Medical Science]]
 
* [[#Shiga_University_of_Medical_Science.2C_Japan|Shiga University of Medical Science, Japan]]
 
* [[#Shiga_University_of_Medical_Science.2C_Japan.2C_SPL|Shiga University of Medical Science, Japan, SPL]]
 
* [[#SPL|SPL]]
 
* [[#SPL_and_BWH|SPL and BWH]]
 
* [[#SPL_B_W_Harvard|SPL B&W Harvard]]
 
* [[#SRI|SRI]]
 
* [[#Stony_Brook_University|Stony Brook University]]
 
* [[#Surgical_Planning_Lab|Surgical Planning Lab]]
 
* [[#UAB|UAB]]
 
* [[#UIowa|UIowa]]
 
* [[#UNC|UNC]]
 
* [[#Univ_of_Michigan|Univ of Michigan]]
 
* [[#University_College_Cork|University College Cork]]
 
* [[#University_of_Bern|University of Bern]]
 
* [[#University_of_Heidelberg|University of Heidelberg]]
 
* [[#University_of_Iowa|University of Iowa]]
 
* [[#University_of_Utah|University of Utah]]
 
* [[#Utah|Utah]]
 
* [[#UWA|UWA]]
 
* [[#Washington_University_in_St._Louis|Washington University in St. Louis]]
 
* [[#yogesh.40bwh.harvard.edu|yogesh@bwh.harvard.edu]]
 
== Asclepios INRIA) and Nikos Chrisochoides (CRTC ==
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]
 
== Boston Childrens Hospital ==
 
* [http://slicer.vmtk.org/ VMTK]
 
== Brigham and Women's Hospital ==
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]]
 
* [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]]
 
== BWH ==
 
* [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]]
 
* [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]]
 
* [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]]
 
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect]
 
* [[Documentation/4.4/Extensions/OpenCAD|Open CAD]]
 
* [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
* [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]]
 
== BWH & MGH ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
== BWH, SPL ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension]
 
== BWH/UAB ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
== CARMA ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit]
 
== College of Information Engineering, Zhejiang University of Technology, Hangzhou, China ==
 
* [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]]
 
== Crisalix ==
 
* [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]]
 
== CRTC ==
 
* [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]]
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]
 
== Department of Neurosurgery, PLA General Hospital, Beijing, China ==
 
* [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]]
 
== Department of Orthodontics, UNC ==
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]
 
== GE ==
 
* [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]]
 
== GE GLobal Research ==
 
* [[Documentation/4.4/Extensions/MABMIS|MABMIS]]
 
== GT ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
== Isomics ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
* [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]]
 
* [http://slicer.vmtk.org/ VMTK]
 
* [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]
 
* [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]]
 
== Kitware ==
 
* [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]]
 
* [[Documentation/4.4/Extensions/ImageMaker|Image Maker]]
 
* [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]]
 
* [[Documentation/4.4/Extensions/PortPlacement|Port Placement]]
 
* [http://slicer.vmtk.org/ VMTK]
 
* [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]
 
== Massachusetts General Hospital ==
 
* [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]]
 
== Moka Creative LLC, Washington University in St. Louis ==
 
* [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]]
 
== NIRAL, UNC ==
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]
 
== Noware ==
 
* [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]]
 
== Orobix ==
 
* [http://slicer.vmtk.org/ VMTK]
 
== PerkLab at Queen's University ==
 
* [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]]
 
== PerkLab, Queen's ==
 
* [[Documentation/4.4/Extensions/MultidimData|Multidim Data]]
 
== PerkLab, Queen's University ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]
 
* [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]]
 
* [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]]
 
* [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]]
 
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]]
 
== PMH ==
 
* [[Documentation/4.4/Extensions/MultidimData|Multidim Data]]
 
== Queen's University ==
 
* [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]]
 
* [[Documentation/4.4/Extensions/ResectionPlanner|Resection Planner]]
 
* [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]]
 
== Radiation Medicine Program, Princess Margaret Hospital, University Health Network Toronto ==
 
* [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]]
 
* [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]]
 
== SBU ==
 
* [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
== SCI Institute ==
 
* [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]]
 
== Shiga University of Medical Science ==
 
* [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]
 
== Shiga University of Medical Science, Japan ==
 
* [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]]
 
== Shiga University of Medical Science, Japan, SPL ==
 
* [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]
 
== SPL ==
 
* [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]]
 
* [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]
 
* [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]]
 
* [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]]
 
* [[Documentation/4.4/Extensions/Reporting|Reporting]]
 
* [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]]
 
== SPL and BWH ==
 
* [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]]
 
== SPL B&W Harvard ==
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]
 
== SRI ==
 
* [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]]
 
== Stony Brook University ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect]
 
== Surgical Planning Lab ==
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]]
 
== UAB ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect]
 
* [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
* [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]]
 
== UIowa ==
 
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures]
 
== UNC ==
 
* [[Documentation/4.4/Extensions/CMFreg|CMFreg]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DeveloperToolsForExtensions Developer Tools For Extensions]
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]
 
* [[Documentation/4.4/Extensions/MABMIS|MABMIS]]
 
* [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]]
 
* [[Documentation/4.4/Extensions/PortPlacement|Port Placement]]
 
== Univ of Michigan ==
 
* [[Documentation/4.4/Extensions/CMFreg|CMFreg]]
 
== University College Cork ==
 
* [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation]]
 
== University of Bern ==
 
* [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]]
 
== University of Heidelberg ==
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]]
 
== University of Iowa ==
 
* [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension]
 
* [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]]
 
== University of Utah ==
 
* [http://www.nitrc.org/projects/abc ABC]
 
== Utah ==
 
* [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
== UWA ==
 
* [[Documentation/4.4/Extensions/ThingiverseBrowser|Thingiverse Browser]]
 
== Washington University in St. Louis ==
 
* [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]]
 
== yogesh@bwh.harvard.edu ==
 
* [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]]
 
= Extensions by contributing individual =
 
130 contributing individuals:
 
* [[#Akila_Viswanathan|Akila Viswanathan]]
 
* [[#Alan_Morris|Alan Morris]]    <small>(Utah)</small>
 
* [[#Alex_Yarmarkovich|Alex Yarmarkovich]]    <small>(Kitware))</small>
 
* [[#Alireza_Mehrtash|Alireza Mehrtash]]    <small>(SPL and BWH)</small>
 
* [[#Allen_Tannenbaum|Allen Tannenbaum]]    <small>(Stony Brook University)</small>
 
* [[#Andinet_Enquobahrie|Andinet Enquobahrie]]    <small>(Kitware)</small>
 
* [[#Andras_Lasso|Andras Lasso]]    <small>(PerkLab, Queen's Universit)</small>
 
* [[#Andre_Mastmeyer|Andre Mastmeyer]]
 
* [[#Andrey_Fedorov|Andrey Fedorov]]    <small>(SPL B&W Harvard)</small>
 
* [[#Andriy_Fedorov|Andriy Fedorov]]    <small>(BWH)</small>
 
* [[#Andriy_Kot|Andriy Kot]]    <small>(CRTC)</small>
 
* [[#Antonio_Damato|Antonio Damato]]
 
* [[#Antonio_Tristan-Vega|Antonio Tristan-Vega]]    <small>(Isomics)</small>
 
* [[#Arie_Nakhmani|Arie Nakhmani]]    <small>(UAB)</small>
 
* [[#Arnaud_Gelas|Arnaud Gelas]]    <small>(Crisalix)</small>
 
* [[#Atsushi_Yamada|Atsushi Yamada]]    <small>(Shiga University of Medical Science)</small>
 
* [[#Beatriz_Paniagua|Beatriz Paniagua]]    <small>(UNC)</small>
 
* [[#Bill_Lorensen|Bill Lorensen]]    <small>(Noware)</small>
 
* [[#Bradley_Lowekamp|Bradley Lowekamp]]    <small>(MSC/NLM)</small>
 
* [[#Brig_Bagley|Brig Bagley]]    <small>(SCI Institute)</small>
 
* [[#Carl-Fredrik_Westin|Carl-Fredrik Westin]]
 
* [[#Christian_Bauer|Christian Bauer]]    <small>(Univ. of Iowa)</small>
 
* [[#Christian_Baumgartner|Christian Baumgartner]]
 
* [[#Csaba_Pinter|Csaba Pinter]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Dan_Marcus|Dan Marcus]]    <small>(Washington University in St. Louis)</small>
 
* [[#Daniel_Haehn|Daniel Haehn]]    <small>(UPenn)</small>
 
* [[#Danny_Perry|Danny Perry]]    <small>(Utah)</small>
 
* [[#Demian_Wasssermann|Demian Wasssermann]]
 
* [[#Dinggang_Shen|Dinggang Shen]]    <small>(UNC)</small>
 
* [[#Ethan_Ulrich|Ethan Ulrich]]    <small>(Univ. of Iowa)</small>
 
* [[#Eugene_Kholmovski|Eugene Kholmovski]]    <small>(CARMA)</small>
 
* [[#Fotis_Drakopoulos|Fotis Drakopoulos]]    <small>(CRTC)</small>
 
* [[#Francois_Budin|Francois Budin]]    <small>(NIRAL, UNC)</small>
 
* [[#Franklin_King|Franklin King]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Greg_Gardner|Greg Gardner]]    <small>(Utah)</small>
 
* [[#Greg_Sharp|Greg Sharp]]    <small>(MGH, Boston)</small>
 
* [[#Guillaume_Pernelle|Guillaume Pernelle]]
 
* [[#Hans_Johnson|Hans Johnson]]    <small>(SINAPSE)</small>
 
* [[#Ipek_Oguz|Ipek Oguz]]
 
* [[#Ivan_Kolesov|Ivan Kolesov]]    <small>(Stony Brook University)</small>
 
* [[#Jan_Egger|Jan Egger]]
 
* [[#Jayender_Jagadeesan|Jayender Jagadeesan]]    <small>(BWH)</small>
 
* [[#Jean-Christophe_Fillion-Robin|Jean-Christophe Fillion-Robin]]    <small>(Kitware)</small>
 
* [[#Jennifer_Andrea|Jennifer Andrea]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Jessica_Forbes|Jessica Forbes]]    <small>(SINAPSE)</small>
 
* [[#Jiashu_Zhang|Jiashu Zhang]]    <small>(Department of Neurosurgery, PLA General Hospital, Beijing, China)</small>
 
* [[#Jim_Miller|Jim Miller]]    <small>(GE)</small>
 
* [[#John_Buatti|John Buatti]]    <small>(Univ. of Iowa)</small>
 
* [[#Jonathan_Bronson|Jonathan Bronson]]    <small>(SCI Institute)</small>
 
* [[#Josh_Cates|Josh Cates]]    <small>(Utah)</small>
 
* [[#Julien_Finet|Julien Finet]]    <small>(Kitware)</small>
 
* [[#Junichi_Tokuda|Junichi Tokuda]]    <small>(BWH)</small>
 
* [[#Karl_Fritscher|Karl Fritscher]]    <small>(BWH & MGH)</small>
 
* [[#Kent_Williams|Kent Williams]]    <small>(UIowa)</small>
 
* [[#Kevin_Wang|Kevin Wang]]    <small>(Princess Margaret Cancer Centre)</small>
 
* [[#Kilian_Pohl|Kilian Pohl]]    <small>(UPenn)</small>
 
* [[#Koichiro_Murakami|Koichiro Murakami]]    <small>(SUMS)</small>
 
* [[#Lauren_Barber|Lauren Barber]]
 
* [[#Laurent_Chauvin|Laurent Chauvin]]    <small>(BWH)</small>
 
* [[#Liang-Jia_Zhu|Liang-Jia Zhu]]    <small>(UAB)</small>
 
* [[#Liangjia_Zhu|Liangjia Zhu]]    <small>(Stony Brook University)</small>
 
* [[#Luca_Antiga|Luca Antiga]]    <small>(Orobix)</small>
 
* [[#Luis_G._Torres|Luis G. Torres]]    <small>(UNC)</small>
 
* [[#Luping_Fang|Luping Fang]]    <small>(College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)</small>
 
* [[#Mahnaz_Maddah|Mahnaz Maddah]]    <small>(SRI)</small>
 
* [[#Manson_Winsauer|Manson Winsauer]]    <small>(UNC)</small>
 
* [[#Marcel_Prastawa|Marcel Prastawa]]    <small>(University of Utah)</small>
 
* [[#Markus_van_Tol|Markus van Tol]]    <small>(Univ. of Iowa)</small>
 
* [[#Martin_Styner|Martin Styner]]    <small>(UNC)</small>
 
* [[#Matt_Lougheed|Matt Lougheed]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Mattea_Welch|Mattea Welch]]    <small>(PerkLab, Queen's University)</small>
 
* [[#Matthew_Holden|Matthew Holden]]    <small>(Queen's University)</small>
 
* [[#Matthew_S._Holden|Matthew S. Holden]]    <small>(Queen's University)</small>
 
* [[#Mauricio_Reyes|Mauricio Reyes]]    <small>(University of Bern)</small>
 
* [[#Ming-ching_Chang|Ming-ching Chang]]    <small>(GE)</small>
 
* [[#Minjeong_Kim|Minjeong Kim]]    <small>(UNC)</small>
 
* [[#Nabgha_Fahrat|Nabgha Fahrat]]
 
* [[#Nicole_Aucoin|Nicole Aucoin]]    <small>(BWH)</small>
 
* [[#Nigel_Goh|Nigel Goh]]    <small>(UWA)</small>
 
* [[#Nikos_Chrisochoides|Nikos Chrisochoides]]    <small>(CRTC)</small>
 
* [[#Olivier_Clatz|Olivier Clatz]]    <small>(Asclepios INRIA) and Nikos Chrisochoides (CRTC)</small>
 
* [[#Pat_Marion|Pat Marion]]    <small>(Kitware)</small>
 
* [[#Patricio_Vela|Patricio Vela]]    <small>(GT)</small>
 
* [[#Paul_Mercea|Paul Mercea]]    <small>(University of Heidelberg)</small>
 
* [[#Pengdong_Xiao|Pengdong Xiao]]    <small>(Department of Orthodontics, UNC)</small>
 
* [[#Peter_Black|Peter Black]]    <small>(BWH)</small>
 
* [[#Peter_Karasev|Peter Karasev]]    <small>(Georgia Tech)</small>
 
* [[#Peter_Savadjiev|Peter Savadjiev]]    <small>(Kitware))</small>
 
* [[#Pietro_Nardelli|Pietro Nardelli]]    <small>(University College Cork)</small>
 
* [[#Qing_Pan|Qing Pan]]    <small>(College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)</small>
 
* [[#Reinhard_Beichel|Reinhard Beichel]]    <small>(University of Iowa)</small>
 
* [[#Reinhard_R._Beichel|Reinhard R. Beichel]]    <small>(Univ. of Iowa)</small>
 
* [[#Rick_Herrick|Rick Herrick]]    <small>(Washington University in St. Louis)</small>
 
* [[#Rob_MacLeod|Rob Mac Leod]]    <small>(Utah)</small>
 
* [[#Ron_Kikinis|Ron Kikinis]]    <small>(BWH)</small>
 
* [[#Ruifeng_Chen|Ruifeng Chen]]    <small>(College of Information Engineering, Zhejiang University of Technology, Hangzhou, China)</small>
 
* [[#Ryan_Eckbo|Ryan Eckbo]]
 
* [[#S|S]]
 
* [[#Salma_Bengali|Salma Bengali]]    <small>(CARMA)</small>
 
* [[#Sam_Song|Sam Song]]
 
* [[#Stefan_Bauer|Stefan Bauer]]    <small>(University of Bern)</small>
 
* [[#Stefan_Lienhard|Stefan Lienhard]]
 
* [[#Steve_Pieper|Steve Pieper]]    <small>(SPL)</small>
 
* [[#Sunil_Kumar|Sunil Kumar]]    <small>(Moka Creative, LLC, kumar.sunil.p@gmail.com)</small>
 
* [[#Sylvain_Bouix|Sylvain Bouix]]    <small>(BWH)</small>
 
* [[#Tamas_Ungi|Tamas Ungi]]    <small>(PerkLab, Queen's Universit)</small>
 
* [[#Thomas_Fejes|Thomas Fejes]]    <small>(University of Bern)</small>
 
* [[#Tina_Kapur|Tina Kapur]]
 
* [[#Tobias_Penzkofer|Tobias Penzkofer]]
 
* [[#Vinicius_Boen|Vinicius Boen]]    <small>(Univ of Michigan)</small>
 
* [[#Vivek_Narayan|Vivek Narayan]]    <small>(BWH)</small>
 
* [[#Xiaofeng_Liu|Xiaofeng Liu]]    <small>(GE GLobal Research)</small>
 
* [[#Xiaojun_Chen|Xiaojun Chen]]
 
* [[#Xiaolei_Chen|Xiaolei Chen]]    <small>(Department of Neurosurgery, PLA General Hospital, Beijing, China)</small>
 
* [[#y_Wells|y Wells]]
 
* [[#Yi_Gao|Yi Gao]]    <small>(BWH/UAB)</small>
 
* [[#Yingxuan_Zhu|Yingxuan Zhu]]    <small>(GE)</small>
 
* [[#Yinpeng_Li|Yinpeng Li]]
 
* [[#Yixun_Liu|Yixun Liu]]    <small>(CRTC)</small>
 
* [[#Yogesh_Rathi|Yogesh Rathi]]    <small>(yogesh@bwh.harvard.edu)</small>
 
* [[#Yundi_Shi|Yundi Shi]]
 
== Akila Viswanathan ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]
 
== Alan Morris ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit]
 
* [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
== Alex Yarmarkovich ==
 
* [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]]
 
== Alireza Mehrtash ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]
 
* [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]]
 
== Allen Tannenbaum ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect]
 
* [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
* [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]]
 
== Andinet Enquobahrie ==
 
* [[Documentation/4.4/Extensions/PortPlacement|Port Placement]]
 
== Andras Lasso ==
 
* [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]]
 
* [[Documentation/4.4/Extensions/MultidimData|Multidim Data]]
 
* [[Documentation/4.4/Extensions/PyDevRemoteDebug|Py Dev Remote Debug]]
 
* [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]]
 
* [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]]
 
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]]
 
== Andre Mastmeyer ==
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]
 
== Andrey Fedorov ==
 
* [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]]
 
* [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]]
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]]
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]
 
* [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension]
 
* [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]]
 
* [[Documentation/4.4/Extensions/Reporting|Reporting]]
 
* [[Documentation/4.4/Extensions/TCIABrowser|TCIABrowser]]
 
* [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]]
 
== Andriy Fedorov ==
 
* [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]]
 
== Andriy Kot ==
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]
 
== Antonio Damato ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]
 
== Antonio Tristan-Vega ==
 
* [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]]
 
== Arie Nakhmani ==
 
* [[Documentation/4.4/Extensions/SobolevSegmenter|Sobolev Segmenter]]
 
== Arnaud Gelas ==
 
* [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]]
 
== Atsushi Yamada ==
 
* [[Documentation/4.4/Extensions/CornerAnnotation|Corner Annotation]]
 
* [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]
 
== Beatriz Paniagua ==
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]
 
== Bill Lorensen ==
 
* [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]]
 
== Bradley Lowekamp ==
 
* [[Documentation/4.4/Extensions/IASEM|IASEM]]
 
== Brig Bagley ==
 
* [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]]
 
== Carl-Fredrik Westin ==
 
* [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]]
 
* [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]]
 
== Christian Bauer ==
 
* [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]]
 
* [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]]
 
== Christian Baumgartner ==
 
* [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]]
 
== Csaba Pinter ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]
 
* [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]]
 
== Dan Marcus ==
 
* [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]]
 
== Daniel Haehn ==
 
* [http://slicer.vmtk.org/ VMTK]
 
== Danny Perry ==
 
* [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
== Demian Wasssermann ==
 
* [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]]
 
== Dinggang Shen ==
 
* [[Documentation/4.4/Extensions/MABMIS|MABMIS]]
 
== Ethan Ulrich ==
 
* [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETDICOM PETDICOMExtension]
 
* [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]]
 
== Eugene Kholmovski ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit]
 
== Fotis Drakopoulos ==
 
* [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]]
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]
 
== Francois Budin ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DeveloperToolsForExtensions Developer Tools For Extensions]
 
* [[Documentation/4.4/Extensions/DTIAtlasFiberAnalyzer|DTIAtlas Fiber Analyzer]]
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]
 
* [[Documentation/4.4/Extensions/MeshToLabelMap|Mesh To Label Map]]
 
== Franklin King ==
 
* [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]]
 
== Greg Gardner ==
 
* [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
== Greg Sharp ==
 
* [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]]
 
== Guillaume Pernelle ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]
 
== Hans Johnson ==
 
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures]
 
* [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]]
 
== Ipek Oguz ==
 
* [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]]
 
== Ivan Kolesov ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect]
 
== Jan Egger ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]
 
== Jayender Jagadeesan ==
 
* [[Documentation/4.4/Extensions/OpenCAD|Open CAD]]
 
* [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]]
 
== Jean-Christophe Fillion-Robin ==
 
* [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]]
 
* [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]]
 
* [http://slicer.vmtk.org/ VMTK]
 
* [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]
 
== Jennifer Andrea ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]
 
== Jessica Forbes ==
 
* [http://brainsia.github.io/CardiacAgatstonMeasures/ Cardiac Agaston Measures]
 
== Jiashu Zhang ==
 
* [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]]
 
== Jim Miller ==
 
* [[Documentation/4.4/Extensions/MABMIS|MABMIS]]
 
* [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]]
 
== John Buatti ==
 
* [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]]
 
* [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]]
 
== Jonathan Bronson ==
 
* [[Documentation/4.4/Extensions/CleaverExtension|Cleaver Extension]]
 
== Josh Cates ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit]
 
* [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
== Julien Finet ==
 
* [[Documentation/4.4/Extensions/ImageMaker|Image Maker]]
 
== Junichi Tokuda ==
 
* [[Documentation/4.4/Extensions/CurveMaker|Curve Maker]]
 
* [[Documentation/4.4/Extensions/ErodeDilateLabel|Erode Dilate Label]]
 
* [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]
 
* [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]]
 
== Karl Fritscher ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
== Kent Williams ==
 
* [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]]
 
== Kevin Wang ==
 
* [[Documentation/4.4/Extensions/MatlabBridge|Matlab Bridge]]
 
* [[Documentation/4.4/Extensions/MultidimData|Multidim Data]]
 
* [[Documentation/4.4/Extensions/SlicerRT|Slicer RT]]
 
== Kilian Pohl ==
 
* [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]]
 
== Koichiro Murakami ==
 
* [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]
 
== Lauren Barber ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]
 
== Laurent Chauvin ==
 
* [[Documentation/4.4/Extensions/DiceComputation|Dice Computation]]
 
* [[Documentation/4.4/Extensions/PercutaneousApproachAnalysis|Percutaneous Approach Analysis]]
 
* [[Documentation/4.4/Extensions/TrackerStabilizer|Tracker Stabilizer]]
 
== Liang-Jia Zhu ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
== Liangjia Zhu ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect]
 
* [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
== Luca Antiga ==
 
* [http://slicer.vmtk.org/ VMTK]
 
== Luis G. Torres ==
 
* [[Documentation/4.4/Extensions/PortPlacement|Port Placement]]
 
== Luping Fang ==
 
* [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]]
 
== Mahnaz Maddah ==
 
* [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]]
 
== Manson Winsauer ==
 
* [[Documentation/4.4/Extensions/CMFreg|CMFreg]]
 
== Marcel Prastawa ==
 
* [http://www.nitrc.org/projects/abc ABC]
 
== Markus van Tol ==
 
* [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]]
 
* [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]]
 
== Martin Styner ==
 
* [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]]
 
== Matt Lougheed ==
 
* [[Documentation/4.4/Extensions/ResectionPlanner|Resection Planner]]
 
* [[Documentation/4.4/Extensions/VolumeClip|Volume Clip]]
 
== Mattea Welch ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/GelDosimetry Gel Dosimetry Analysis]
 
== Matthew Holden ==
 
* [[Documentation/4.4/Extensions/MultidimData|Multidim Data]]
 
== Matthew S. Holden ==
 
* [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]]
 
== Mauricio Reyes ==
 
* [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]]
 
== Ming-ching Chang ==
 
* [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]]
 
== Minjeong Kim ==
 
* [[Documentation/4.4/Extensions/MABMIS|MABMIS]]
 
== Nabgha Fahrat ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]
 
== Nicole Aucoin ==
 
* [[Documentation/4.4/Extensions/Reporting|Reporting]]
 
== Nigel Goh ==
 
* [[Documentation/4.4/Extensions/ThingiverseBrowser|Thingiverse Browser]]
 
== Nikos Chrisochoides ==
 
* [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]]
 
== Olivier Clatz ==
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]
 
== Pat Marion ==
 
* [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]
 
== Patricio Vela ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
== Paul Mercea ==
 
* [[Documentation/4.4/Extensions/LongitudinalPETCT|Longitudinal PETCT]]
 
== Pengdong Xiao ==
 
* [[Documentation/4.4/Extensions/IntensitySegmenter|Intensity Segmenter]]
 
== Peter Black ==
 
* [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]]
 
== Peter Karasev ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
== Peter Savadjiev ==
 
* [[Documentation/4.4/Extensions/FinslerTractography|Finsler Tractography]]
 
* [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]]
 
== Pietro Nardelli ==
 
* [[Documentation/4.4/Extensions/AirwaySegmentation|Airway Segmentation]]
 
== Qing Pan ==
 
* [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]]
 
== Reinhard Beichel ==
 
* [[Documentation/4.4/Extensions/PETTumorSegmentation|PETTumor Segmentation]]
 
== Reinhard R. Beichel ==
 
* [[Documentation/4.4/Extensions/PET-IndiC|PET-Indi C]]
 
== Rick Herrick ==
 
* [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]]
 
== Rob MacLeod ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit]
 
* [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
== Ron Kikinis ==
 
* [[Documentation/4.4/Extensions/ChangeTracker|Change Tracker]]
 
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect]
 
== Ruifeng Chen ==
 
* [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]]
 
== Ryan Eckbo ==
 
* [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]]
 
== S ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]
 
== Salma Bengali ==
 
* [http://capulet.med.utah.edu/namic/cmrslicer/ Cardiac MRI Toolkit]
 
== Sam Song ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]
 
== Stefan Bauer ==
 
* [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]]
 
== Stefan Lienhard ==
 
* [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]]
 
== Steve Pieper ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
* [[Documentation/4.4/Extensions/Reporting|Reporting]]
 
* [http://slicer.vmtk.org/ VMTK]
 
* [[Documentation/4.4/Extensions/SlicerToKiwiExporter|Slicer To Kiwi Exporter]]
 
* [[Documentation/4.4/Extensions/WindowLevelEffect|Window Level Effect]]
 
* [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]]
 
== Sunil Kumar ==
 
* [[Documentation/4.4/Extensions/XNATSlicer|XNATSlicer]]
 
== Sylvain Bouix ==
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
== Tamas Ungi ==
 
* [[Documentation/4.4/Extensions/PerkTutor|Perk Tutor]]
 
* [[Documentation/4.4/Extensions/Scoliosis|Scoliosis]]
 
* [[Documentation/4.4/Extensions/SlicerIGT|Slicer IGT]]
 
== Thomas Fejes ==
 
* [[Documentation/4.4/Extensions/SwissSkullStripper|Swiss Skull Stripper]]
 
== Tina Kapur ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]
 
== Tobias Penzkofer ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]
 
== Vinicius Boen ==
 
* [[Documentation/4.4/Extensions/CMFreg|CMFreg]]
 
== Vivek Narayan ==
 
* [[Documentation/4.4/Extensions/OpenCAD|Open CAD]]
 
== Xiaofeng Liu ==
 
* [[Documentation/4.4/Extensions/MABMIS|MABMIS]]
 
== Xiaojun Chen ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]
 
== Xiaolei Chen ==
 
* [[Documentation/4.4/Extensions/GyroGuide|Gyro Guide]]
 
== y Wells ==
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]
 
== Yi Gao ==
 
* [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/CarreraSliceInteractiveSegmenter Carrera Slice]
 
* [https://www.slicer.org/slicerWiki/index.php/Documentation/4.3/Modules/FastGrowCut Fast Grow Cut Effect]
 
* [[Documentation/4.4/Extensions/iGyne|i Gyne]]
 
* [[Documentation/4.4/Extensions/LAScarSegmenter|LAScar Segmenter]]
 
* [[Documentation/4.4/Extensions/NeedleFinder|Needle Finder]]
 
* [http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/SegmentationAidedRegistration Segmentation Aided Registration]
 
== Yingxuan Zhu ==
 
* [[Documentation/4.4/Extensions/PkModeling|Pk Modeling]]
 
== Yinpeng Li ==
 
* [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]]
 
== Yixun Liu ==
 
* [[Documentation/4.4/Extensions/CBC_3D_I2MConversion|CBC 3D I2MConversion]]
 
* [[Documentation/4.4/Extensions/PBNRR|PBNRR]]
 
== Yogesh Rathi ==
 
* [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]]
 
== Yundi Shi ==
 
* [[Documentation/4.4/Extensions/UKFTractography|UKFTractography]]
 

Latest revision as of 17:32, 21 November 2019

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