Difference between revisions of "Documentation/4.3/Announcements"

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<gallery caption="New and Improved Extensions" widths="250px" heights="150px" perrow="4">
 
<gallery caption="New and Improved Extensions" widths="250px" heights="150px" perrow="4">
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Image:AirwaySegmentation Module.png|[[Documentation/{{documentation/version}}/Extensions/AirwaySegmentation|Airway Segmentation]] {{new}}
 +
Image:CMRTK-logo.png|[[Documentation/{{documentation/version}}/Extensions/CARMA|Cardiac MRI Toolkit]] to analyze cardiac LGE-MRI images. {{new}}
 +
Image:ChangeTracker logo.png|[[Documentation/{{documentation/version}}/Extensions/ChangeTracker| Change Tracker]] for quantification of the subtle changes in pathology. {{new}}
 +
Image:DiceSimilarityCoefficient.png|[[Documentation/{{documentation/version}}/Extensions/DiceComputation|Dice Computation]]  is capable of calculating the Dice Similarity Coefficient (DSC) between multiple label map images. {{new}}
 +
Image:ErodeDilateLabelIcon.png|[[Documentation/{{documentation/version}}/Extensions/ErodeDilateLabel|Erode/Dilate Label]] to  perform binary erosion and dilation of a specified label. {{new}}
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Image:IASEM-Screenshot1.png|[[Documentation/{{documentation/version}}/Extensions/IASEM| IASEM]]  for segmentation and processing of IASEM Electron Microscopy images. {{new}}
 
Image:QuickToolsLogo.png|[[Documentation/{{documentation/version}}/Extensions/ImageMaker|Image Maker]] to create volumes from scratch. {{new}}
 
Image:QuickToolsLogo.png|[[Documentation/{{documentation/version}}/Extensions/ImageMaker|Image Maker]] to create volumes from scratch. {{new}}
 +
Image:LAScarSegmenter.png|[[Documentation/{{documentation/version}}/Extensions/LAScarSegmenter|LA Scar Segmenter]] to perform segmentation of the left atrial scarring tissue from MR images. {{new}}
 +
Image:LASegmenter.png|[[Documentation/{{documentation/version}}/Extensions/LASegmenter|LA Segmenter]] to perform segmentation of the left atrium from MR images. {{new}}
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Image:LongitudinalPETCTLogo.png|[[Documentation/{{documentation/version}}/Extensions/LongitudinalPETCT| Longitudinal PET/CT]] to provide a user friendly Slicer interface for quantification of DICOM PET/CT image data {{updated}
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Image:MatlabBridgeLogo.png|[[Documentation/{{documentation/version}}/Extensions/MatlabBridge| Matlab Bridge]] to allow running Matlab functions directly in 3D Slicer. {{new}}
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Image:ModelClipScreenShot.png|[[Documentation/{{documentation/version}}/Extensions/ModelClip| Model Clip]]  to set the osteotomy trajectory with multiple planes, and clip the model with just one click. {{new}}
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Image:PathXplorer PathCreation.png|[[Documentation/{{documentation/version}}/Extensions/PathPlanner| Path Planner]]  designed to facilitate the creation of trajectory. {{new}}
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Image:PlusRemoteLogo.png|[[Documentation/{{documentation/version}}/Extensions/PlusRemote|PlusRemote]] for sending commands through OpenIGTLink Remote to PLUS. {{new}}
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Image:Portplacement.png|[[Documentation/{{documentation/version}}/Extensions/PortPlacement| Port Placement]]  assists in the planning of surgical port placement in a laparoscopic procedure. {{new}}
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Image:ReportingLogo.png|[[Documentation/{{documentation/version}}/Extensions/Reporting|Reporting]] to create image annotations/markup that are stored in a structured form. {{updated}}
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Image:SobolevSegmenter.png|[[Documentation/{{documentation/version}}/Extensions/SobolevSegmenter|Sobolev Segmenter]]  implements Sobolev inner product based active contour, using the Chan-Vese energy functional. {{updated}}
 +
Image:SlicerIGTLogo.png|[[Documentation/{{documentation/version}}/Extensions/SlicerIGT|SlicerIGT]] to use all the advanced features of 3D Slicer for real-time navigation. {{new}}
 +
Image:SlicerRT Logo 2.0 128x128.png|[[Documentation/{{documentation/version}}/Extensions/SlicerRT|SlicerRT]] a tool for powerful radiotherapy research. {{updated}}
 
Image:SlicerToKiwiExporterLogo.png|[[Documentation/{{documentation/version}}/Extensions/SlicerToKiwiExporter|SlicerToKiwiExporter]] provides users with any easy way to export [[Documentation/{{documentation/version}}/Modules/Models|models]] into a [http://www.kiwiviewer.org/ KiwiViewer]. {{new}}  
 
Image:SlicerToKiwiExporterLogo.png|[[Documentation/{{documentation/version}}/Extensions/SlicerToKiwiExporter|SlicerToKiwiExporter]] provides users with any easy way to export [[Documentation/{{documentation/version}}/Modules/Models|models]] into a [http://www.kiwiviewer.org/ KiwiViewer]. {{new}}  
Image:CMRTK-logo.png|[[Documentation/{{documentation/version}}/Extensions/CARMA|Cardiac MRI Toolkit]] to analyze cardiac LGE-MRI images. {{new}}
+
Image:SwissSkullStripper.png|[[Documentation/{{documentation/version}}/Extensions/SwissSkullStripper|Swiss Skull Stripper]] registers an atlas image to the patient data. {{new}}
Image:ReportingLogo.png|[[Documentation/{{documentation/version}}/Extensions/Reporting|Reporting]] to create image annotations/markup that are stored in a structured form. {{new}}
+
Image:TrackerStabilizer.png|[[Documentation/{{documentation/version}}/Extensions/TrackerStabilizer|Tracker Stabilizer]] allows to output a filtered transform node based on an tracker input (transform node). {{new}}
Image:SlicerRT Logo 2.0 128x128.png|[[Documentation/{{documentation/version}}/Extensions/SlicerRT|SlicerRT]] a tool for powerful radiotherapy research. {{new}}
 
Image:SlicerIGTLogo.png|[[Documentation/{{documentation/version}}/Extensions/SlicerIGT|SlicerIGT]] to use all the advanced features of 3D Slicer for real-time navigation. {{new}}
 
Image:MatlabBridgeLogo.png|[[Documentation/{{documentation/version}}/Extensions/MatlabBridge| Matlab Bridge]] to allow running Matlab functions directly in 3D Slicer. {{new}}
 
Image:ErodeDilateLabelIcon.png|[[Documentation/{{documentation/version}}/Extensions/ErodeDilateLabel|Erode/Dilate Label]] to perform binary erosion and dilation of a specified label. {{new}}
 
 
Image:TransformVisualizerLogo.png|[[Documentation/{{documentation/version}}/Extensions/TransformVisualizer|Transform Visualizer]] to visualize any transform (linear transform, B-spline deformable transform, any other non-linear transform) or vector volume. {{new}}
 
Image:TransformVisualizerLogo.png|[[Documentation/{{documentation/version}}/Extensions/TransformVisualizer|Transform Visualizer]] to visualize any transform (linear transform, B-spline deformable transform, any other non-linear transform) or vector volume. {{new}}
 
Image:WindowLevelEffectLogo.png|[[Documentation/{{documentation/version}}/Extensions/WindowLevelEffect|Window/Level Effect]] to adjust window/level for volumes using mouse and/or region of interest. {{new}}
 
Image:WindowLevelEffectLogo.png|[[Documentation/{{documentation/version}}/Extensions/WindowLevelEffect|Window/Level Effect]] to adjust window/level for volumes using mouse and/or region of interest. {{new}}
 +
Image:XNATSlicer-Med.png|[[Documentation/{{documentation/version}}/Extensions/XNATSlicer| XNAT Slicer]] Secure GUI-based IO with any XNAT server. {{new}}
  
  

Revision as of 17:13, 11 September 2013

Home < Documentation < 4.3 < Announcements


For the latest Slicer documentation, visit the read-the-docs.




4.3


Introduction Our Philosophy Slicer Highlights Slicer Extensions Other Improvements, Additions & Documentation

Summary

The community of Slicer developers is proud to announce the release of Slicer 4.3.

  • Slicer 4.3 introduces
    • a new App store, called the extension manager, for adding capabilities to Slicer. Close to 40 plug-ins are currently available.
    • close to 500 feature improvements and bug fixes lead to improved performance and stability.
    • augmentation of many modules.
    • improved workflows in registration and dMRI
    • the multivolume explorer allows interaction with time series and DCE data.
    • major improvements to the DICOM module
    • a new Markups module to streamline the use of fiducial lists


  • Click here to download Slicer 4.3 for different platforms and find pointers to the source code, mailing lists and bug tracker.
  • Please note that Slicer continues to be a research package and is not intended for clinical use. Testing of functionality is an ongoing activity with high priority, however, some features of Slicer are not fully tested.
  • The Slicer Training page provides a series of courses for learning how to use Slicer. The portfolio contains self-guided presentation and sample data sets.

The main slicer.org pages provide a guided tour to the application, training materials, and the development community. New users should start there because we try to keep the pages organized and up to date.

Find out more about Slicer 4.3 in the webinar held on [...]:

Webinar-Slicer-4.1.png

What is 3D Slicer

Slicer is a community platform created for the purpose of subject specific image analysis and visualization.

  • Multi-modality imaging including, MRI, CT, US, nuclear medicine, and microscopy
  • Multi organ from head to toe
  • Bidirectional interface for devices
  • Expandable and interfaced to multiple toolkits

There is no restriction on use, but permissions and compliance with rules are responsibility of users. For details on the license see here

Slicer 4.3 Highlights

Slicer Extensions

Other Improvements, Additions & Documentation

For Developers: Looking at the Code Changes

From a git checkout you can easily see the all the commits since the time of the 4.4.2 release:

git log --since="Sat Dec 8 03:32:53 2012"

To see a summary of your own commits, you could use something like:

git log --since="Sat Dec 8 03:32:53 2012"  --oneline --author=pieper

see the git log man page for more options.

Commit stats and full changelog

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