Difference between revisions of "Documentation/4.0/Modules/Transforms"

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{{documentation/{{documentation/version}}/module-section|Panels and their use}}
 
{{documentation/{{documentation/version}}/module-section|Panels and their use}}
 
A list of all the panels in the interface, their features, what they mean, and how to use them. For instance:
 
  
 
{|style="width: 100%"
 
{|style="width: 100%"
 
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* Input panel1:
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* Load panel:
** First input
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** Load Transfrom button: brings a file browser allowing user to load a previously saved transformations from ITK style .tfm file. The .tfm files are also created by slicer when saving a scene containing transformation nodes.
** Second input
+
* Display and Edit panel:
* Parameters panel:
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** Transform node selector: selects an existing transformation node or creates a new one and adds it to the scene.
** First parameter
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** Transform Matrix: displays values and allows editing of individual components of 4x4 transformation matrix.
** Second parameter
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* Output panel:
 
** First output
 
** Second output
 
* Viewing panel:
 
 
| align="right" |
 
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[[Image:TransfromModule.PNG|thumb|280px|Name of panel 1]]
 
[[Image:TransfromModule.PNG|thumb|280px|Name of panel 1]]
 
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* Input panel2:
 
** First input
 
** Second input
 
* Parameters panel:
 
** First parameter
 
** Second parameter
 
* Output panel:
 
** First output
 
** Second output
 
* Viewing panel:
 
| align="right" |
 
[[Image:screenshotBlankNotOptional.png|thumb|280px|Name of panel 2]]
 
 
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Revision as of 14:54, 22 November 2011

Home < Documentation < 4.0 < Modules < Transforms


Introduction and Acknowledgements

This work is part of the National Alliance for Medical Image Computing (NA-MIC), funded by the National Institutes of Health through the NIH Roadmap for Medical Research, Grant U54 EB005149. Information on NA-MIC can be obtained from the NA-MIC website.
Author: Alex Yarmarkovich, Isomics, SPL
Contact: Alex Yarmarkovich, alexy@bwh.harvard.edu

Isomics Inc.  
NA-MIC  
NAC  


Module Description

Transform module is used for creating and editing transformation matrices.


Use Cases

Most frequently Transform module is used for these scenarios:

  • Manual Registration: You can insert a transformation node into your scene, and in the Data module drag a volume or a model under it,

making them children of the transformation node. After that any changes to the transformation matrix of this node will be applied to the display of children volumes and models.


Tutorials

Panels and their use

  • Load panel:
    • Load Transfrom button: brings a file browser allowing user to load a previously saved transformations from ITK style .tfm file. The .tfm files are also created by slicer when saving a scene containing transformation nodes.
  • Display and Edit panel:
    • Transform node selector: selects an existing transformation node or creates a new one and adds it to the scene.
    • Transform Matrix: displays values and allows editing of individual components of 4x4 transformation matrix.
Name of panel 1

Similar Modules

  • Point to other modules that have similar functionality

References

Publications related to this module go here. Links to pdfs would be useful. For extensions: link to the source code repository and additional documentation

Information for Developers


Note The section above is generated using the following wiki code:

{{documentation/{{documentation/version}}/module-section|Information for Developers}}
{{documentation/{{documentation/version}}/module-developerinfo|ModuleTemplate|type=Interactive|category=Example}}

If you are documenting a CLI, the category should be extracted from the corresponding XML description. This could be done automatically using the following wiki template:

{{documentation/{{documentation/version}}/module-category|xmlurl=http://path/to/YOURMODULENAME.xml }}

If your module is available in Slicer repository, the following template could be useful to obtain the corresponding URL:

{{documentation/{{documentation/version}}/module-cli-xmlurl|{{documentation/modulename}}|SVNREVISION}}

Using this later template, the final syntax would be:

{{documentation/{{documentation/version}}/module-category|xmlurl={{documentation/{{documentation/version}}/module-cli-xmlurl|{{documentation/modulename}}|SVNREVISION}} }}