Difference between revisions of "Documentation/4.0/Modules/EMSegmenter"

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Revision as of 20:38, 4 November 2011

Home < Documentation < 4.0 < Modules < EMSegmenter


Introduction and Acknowledgements

This work is part of the National Alliance for Medical Image Computing (NA-MIC), funded by the National Institutes of Health through the NIH Roadmap for Medical Research, Grant U54 EB005149. Information on NA-MIC can be obtained from the NA-MIC website.
Author: Kilian Pohl: UPenn
Contributor1: FIRSTNAME LASTNAME, AFFILIATION
Contributor2: FIRSTNAME LASTNAME, AFFILIATION
Contact: Kilian Pohl, <email>pohl@csail.mit.edu</email>

Isomics, Inc. <- Replace this logo with yours  
Surgical Planning Laboratory <-Replace this logo with yours  

Note The section above is generated using the following wiki code:

{{documentation/{{documentation/version}}/module-section|Introduction and Acknowledgements}}
{{documentation/{{documentation/version}}/module-introduction-start|{{documentation/modulename}}}}
{{documentation/{{documentation/version}}/module-introduction-row}}
This work is part of the National Alliance for Medical Image Computing (NA-MIC), funded by the National Institutes of Health through the NIH Roadmap for Medical Research, Grant U54 EB005149. Information on NA-MIC can be obtained from the [http://www.na-mic.org/ NA-MIC website].<br>
Author: FIRSTNAME LASTNAME, AFFILIATION<br>
Contributor1: FIRSTNAME LASTNAME, AFFILIATION<br>
Contributor2: FIRSTNAME LASTNAME, AFFILIATION<br>
Contact: FIRSTNAME LASTNAME, <email>john@doe.org</email><br>
{{documentation/{{documentation/version}}/module-introduction-row}}
{{documentation/{{documentation/version}}/module-introduction-logo-gallery
|Image:Logo-isomics.png|Isomics, Inc. <- Replace this logo with yours
|Image:Logo-splnew.jpg|Surgical Planning Laboratory   <-Replace this logo with yours
}}
{{documentation/{{documentation/version}}/module-introduction-end}}


Module Description

Here comes a description what the module is good for. Explain briefly how it works and point to the references giving more details on the algorithm.

If you are documenting a CLI, the description should be extracted from the corresponding XML description. This could be done automatically using the following wiki template:

{{documentation/{{documentation/version}}/module-description|xmlurl=http://path/to/YOURMODULE.xml }}

If your module is available in Slicer repository, the following template could be useful to obtain the corresponding URL:

{{documentation/{{documentation/version}}/module-cli-xmlurl|{{documentation/modulename}}|SVNREVISION}}

Using this later template, the final syntax would be:

{{documentation/{{documentation/version}}/module-description|xmlurl={{documentation/{{documentation/version}}/module-cli-xmlurl|{{documentation/modulename}}|SVNREVISION}} }}


Use Cases

Most frequently used for these scenarios:

  • Use Case 1:
  • Use Case 2:

Tutorials

Links to tutorials that use this module

Panels and their use

A list of all the panels in the interface, their features, what they mean, and how to use them. For instance:

  • Input panel1:
    • First input
    • Second input
  • Parameters panel:
    • First parameter
    • Second parameter
  • Output panel:
    • First output
    • Second output
  • Viewing panel:
Name of panel 1
  • Input panel2:
    • First input
    • Second input
  • Parameters panel:
    • First parameter
    • Second parameter
  • Output panel:
    • First output
    • Second output
  • Viewing panel:
Name of panel 2

Similar Modules

  • Point to other modules that have similar functionality

References

Publications related to this module go here. Links to pdfs would be useful. For extensions: link to the source code repository and additional documentation

Information for Developers


Note The section above is generated using the following wiki code:

{{documentation/{{documentation/version}}/module-section|Information for Developers}}
{{documentation/{{documentation/version}}/module-developerinfo|ModuleTemplate|type=Interactive|category=Example}}

If you are documenting a CLI, the category should be extracted from the corresponding XML description. This could be done automatically using the following wiki template:

{{documentation/{{documentation/version}}/module-category|xmlurl=http://path/to/YOURMODULENAME.xml }}

If your module is available in Slicer repository, the following template could be useful to obtain the corresponding URL:

{{documentation/{{documentation/version}}/module-cli-xmlurl|{{documentation/modulename}}|SVNREVISION}}

Using this later template, the final syntax would be:

{{documentation/{{documentation/version}}/module-category|xmlurl={{documentation/{{documentation/version}}/module-cli-xmlurl|{{documentation/modulename}}|SVNREVISION}} }}