Difference between revisions of "DTI Fiber Clustering Module-Documentation-3.6.2"

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== Multi-Subject ==
 
== Multi-Subject ==
  
Test3 Data - Clustering of the genu using the SRI24 atlas [[Media:multi-subject.tar.gz]]
+
Test3 Data - Clustering of the genu in multiple subjects [[Media:multi-subject.tar.gz]]

Revision as of 19:37, 31 January 2011

Home < DTI Fiber Clustering Module-Documentation-3.6.2

Module Name

Fiber Clustering and Analysis (EM Fiber Clustering) Module

Module interface
An example of DTI fiber clustering and tract-oriented quantitative analysis

Installation

To add the module to an installed binary of slicer (3.6.2 and later):

  • Use the View->Extension Manager menu option
  • The dialog will be initialized with the URL to the extensions that have been compiled to match your binary of slicer.
  • Select EM Fiber Clustering to install and click to download. The installed extension, Fiber Clustering and Analysis, will be available when you restart slicer under Modules --> Diffusion --> Tractography.

Please report any installation problem to Mahnaz Maddah (mmaddah at alum.mit.edu)

Instructions and Test Data

Single-Subject

Test1 Data - Clustering of the cingulum fiber tracts Media:single_subject.tar.gz

Single-Subject with Atlas-Based Seeding

Test2 Data - Clustering of the uncinate fasciculus tract using the SRI24 atlas Media:atlas_based_seeding.tar.gz

Multi-Subject

Test3 Data - Clustering of the genu in multiple subjects Media:multi-subject.tar.gz