CCA:Atlases:Florins 2010 Hierarchy

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Contents

body

head

soft tissue of the head

  • skin of head
  • muscles of head
    • masticatory muscles
      • temporal muscle
      • masseter muscle
      • lateral pterygoid muscle
      • medial pterygoid muscle
    • facial muscles
      • frontal muscle
      • corrugator muscle
      • orbicularis occulis muscle
      • levator angulis oris muscle
      • orbicularis oris muscle
      • risorius muscle
      • nasalis muscle
      • mentalis muscle
      • depressor labii inferioris muscle
      • depressor angulis oris muscle
      • buccinator muscle
      • occipitalis muscle
  • salivary glands
    • parotid glands
    • sublingual glands
    • submandibular glands
  • tongue
  • soft palate
  • tonsils
  • external ear
  • middle ear
  • internal ear
  • eyes
  • extraocular muscles

skull

  • frontal bone
  • parietal bone
  • temporal bone
  • sphenoid bone
  • ethmoid bone
  • occipital bone
  • maxilla
  • zygomatic bone
  • lacrimal bone
  • vomer bone
  • palatine bone
  • mandible

teeth

central nervous system

meninges

  • dura mater
  • arachnoid
  • pia mater

Brain

  • CSF spaces
    • ventricles
      • right lateral ventricle
      • left lateral ventricle
      • third ventricle
      • cerebral aqueduct
      • fourth ventricle
    • subarachnoid space (including cysterns)
  • brain parenchyma
    • gray matter of brain
      • telencephalon
        • cerebral cortex
          • frontal lobe
            • superior frontal gyrus
            • middle frontal gyrus
            • inferior frontal gyrus
            • orbital gyri
            • straight gyrus
            • precentral gyrus
            • paracentral lobule
            • frontal pole
          • temporal lobe
            • superior temporal gyrus
            • middle temporal gyrus
            • inferior temporal gyrus
            • hippocampus
            • parahippocampal gyrus
            • temporal part of medial occipitotemporal gyrus
            • temporal part of lateral occipitotemporal gyrus
            • uncus
            • temporal pole
          • parietal lobe
            • postcentral gyrus
            • superior parietal lobule
            • inferior parietal lobule
            • precuneus
          • occipital lobe
            • superior occipital gyri
            • inferior occipital gyri
            • gyrus descendens
            • lingual gyrus
            • occipital part of medial occipitotemporal gyrus
            • occipital part of lateral occipitotemporal gyrus
            • cuneus
            • occipital pole
          • insular lobe
            • limen of insula
            • long insular gyrus
            • short insular gyri
          • limbic lobe
            • cingulate gyrus
            • paraterminal gyrus
            • indusium griseum
            • olfactory bulb
            • olfactory tract
        • subcortical gray matter of telencephalon
          • striatum
            • nucleus accumbens
            • caudate nucleus
            • putamen
          • pallidum
            • globus pallidus pars externa
            • globus pallidus pars interna
          • septal nuclei
          • amygdaloid complex
          • claustrum
      • diencephalon
        • thalamus
          • thalamic nuclei
        • subthalamus
          • subthalamic nucleus
        • hypothalamus
          • hypothalamic nuclei
          • mamillary bodies
          • substantia perforata
            • anterior substantia perforata
            • posterior substantia perforata
          • pituitary infundibulum
        • epithalamus
          • habenula
            • habenular nuclei
          • pineal body
        • gray matter of mesencephalon
          • red nucleus
          • substantia nigra
            • substantia nigra pars compacta
            • substantia nigra pars reticularis
          • superior colliculus
          • inferior colliculus
          • occulomotor nerve nucleus (CN III)
          • trochlear nerve nucleus (CN IV)
          • mesencephalic nucleus of the trigeminal nerve (CN V)
          • periaqueductal gray matter
        • gray matter of metencephalon
          • gray matter of pons
            • principal sensory nucleus of trigeminal nerve (CN V)
            • motor nucleus of the trigeminal nerve (CN V)
            • abducent nerve nucleus
            • facial nerve nucleus
          • cerebellar gray matter
            • cerebellar cortex
            • subcortical cerebellar gray matter
              • dentate nucleus
              • emboliform nucleus
              • globose nucleus
              • fastigial nucleus
          • gray matter of myelencephalon (medulla oblongata)
            • spinal nucleus of the trigeminal nerve (CN V)
            • cochlear nuclei (CN VIII)
            • vestibular nuclei (CN VIII)
            • superior salivatory nucleus
            • inferior salivatory nucleus
            • nucleus ambiguus
            • posterior (dorsal nucleus) of the vagus nerve (CN X)
            • solitary tract nucleus
            • hipoglossal nerve nucleus
    • cerebral white matter
      • association white matter tracts
        • U-fibers
        • superior longitudinal fasciculus
        • inferior longitudinal fasciculus
        • arcuate fasciculus
        • uncinate fasciculus
        • cingulum
      • projection fibers
        • corticospinal tract
        • corticomesencephalic tract
        • corticopontine tract
        • corticobulbar tract
        • optic radiation
        • thalamo-cortical projection fibers
        • medial lemniscus
        • lateral lemniscus
        • superior cerebellar peduncles
        • middle cerebellar peduncles
        • inferior cerebellar peduncles
        • optic nerves, optic chiasm, optic tracts
        • fornix
        • mamilo-thalamic tract
        • mamilo-mesencephalic tract
        • thalamic fasciculus
          • ansa lenticularis
          • lenticular fasciculus
      • commissural fibers
        • corpus callosum
        • anterior commissure
        • posterior commissure
    • cerebellar white matter

spinal cord

  • gray matter of spinal cord
    • anterior horn
    • posterior horn
    • intermediate horn
  • white matter of spinal cord
    • Anterior column
    • Lateral column
    • Posterior column

endocrine system of brain

  • pituitary gland
    • adenohypophysis
    • neurohypophysis

neck

soft tissue of neck

skin of neck

muscles of neck

pharynx

larynx

thyroid gland

parathyroid glands

skeleton of neck

  • hyoid bone
  • cervical spinal column
    • cervical vertebrae
      • cervical vertebra C1
      • cervical vertebra C2
      • cervical vertebra C3
      • cervical vertebra C4
      • cervical vertebra C5
      • cervical vertebra C6
      • cervical vertebra C7

thorax

soft tissue of thorax

soft tissue of thoracic wall

Skin of thoracic wall
muscles of thoracic wall

contents of thoracic cavity

trachea
bronchi
  • right main bronchus
  • left main bronchus
Right lung
  • superior lobe of right lung
  • middle lobe of right lung
  • inferior lobe of right lung
Left lung
  • superior lobe of left lung
  • inferior lobe of left lung
Pleura
  • parietal pleura
  • visceral pleura
  • pleural cavity
Heart
  • right atrium
  • left atrium
  • atrial septum
  • ventricular septum
  • right ventricle of heart
    • papillary muscles of right ventricle of heart
    • chordae tendineae of right ventricle of heart
  • left ventricle of heart
    • papillary muscles of left ventricle of heart
    • chordae tendineae of left ventricle of heart
  • mitral valve
  • tricuspid valve
  • aortic valve
  • pulmonary valve
pericardium
  • pericardial cavity
esophagus
thymus
mediastinum

skeleton of thorax

  • thoracic vertebral column
    • thoracic vertebrae
      • thoracic vertebra T1
      • thoracic vertebra T2
      • thoracic vertebra T3
      • thoracic vertebra T4
      • thoracic vertebra T5
      • thoracic vertebra T6
      • thoracic vertebra T7
      • thoracic vertebra T8
      • thoracic vertebra T9
      • thoracic vertebra T10
      • thoracic vertebra T11
      • thoracic vertebra T12
  • ribs
    • rib I
    • rib II
    • rib III
    • rib IV
    • rib V
    • rib VI
    • rib VII
    • rib VIII
    • rib IX
    • rib X
    • rib XI
    • rib XII
  • sternum
    • manubrium
    • body of sternum
    • xyphoid process
  • clavicles

abdomen

soft tissue of abdomen

soft tissue of abdominal wall

skin of abdominal wall
muscles of abdominal wall

contents of abdominal cavity

  • peritoneum
    • parietal peritoneum
    • visceral peritoneum
    • omentum
    • peritoneal cavity
      • bursa omentalis
      • Douglas' recess
    • falciform ligament of liver
    • mesentery
    • mesocolon
      • transverse mesocolon
      • sigmoid mesocolon
    • broad ligament of uterus
      • mesometrium
      • mesosalpinx
      • mesovarium
  • retroperitoneal space
  • stomach
    • cardia
    • fundus of stomach
    • body of stomach
    • pylorus
  • duodenum
    • ampulla of Vater
  • small bowel
    • jejunum
    • ileum
  • colon
    • cecum
      • ileocecal valve
      • appendix
    • ascending colon
    • transverse colon
    • sigmoid colon
    • rectum
    • anus
  • liver
    • capsule of liver
    • right lobe of liver
    • left lobe of liver
    • caudate lobe of liver
    • quadrate lobe of liver
    • ligamentum teres
  • biliary tree
    • right hepatic duct
    • left hepatic duct
    • common hepatic duct
    • common bile duct
    • cystic duct
    • gallbladder
  • pancreas
    • head of pancreas
    • body of pancreas
    • tail of pancreas
    • pancreatic duct
    • islets of Langerhans
  • spleen
  • right kidney
    • parenchyma of right kidney
      • cortex of right kidney
      • medulla of right kidney
  • right renal pelvis
  • left kidney
    • parenchyma of left kidney
      • cortex of left kidney
      • medulla of left kidney
  • left renal pelvis
  • right ureter
  • left ureter
  • urinary bladder
  • uretra
  • suprarenal glands
    • corticosuprarenal glands
    • medullosuprarenal glands
  • female internal genitalia
    • uterus
      • fundus of uterus
      • body of uterus
      • cervix
      • round ligaments
      • uterosacral ligaments
      • pubocervical ligament
    • fallopian tubes
    • ovaries
    • vagina
  • male internal genitalia
    • prostate
    • seminal vesicles
    • deferent ducts

skeleton of Abdomen

lumbar spine

  • lumbar vertebrae
    • lumbar vertebra L1
    • lumbar vertebra L2
    • lumbar vertebra L3
    • lumbar vertebra L4
    • lumbar vertebra L5

sacrum

coccis

coxal bones

female external genitalia

vulva

  • vulval vestibule
  • hymen
  • major labia
  • minor labia
  • praeputium
  • clitoris
    • glans of clitoris
    • body of clitoris
      • corpus cavernosum of clitoris
    • prepuce of clitoris
  • Bartolin's glands

male external genitalia

penis

  • glans of penis
    • meatus
  • shaft
    • corpus cavernosum of penis
    • spongious body
  • prepuce of penis

scrotum

  • skin of scrotum
  • dartos layer
  • cremaster muscle
  • testicles
    • epididimis
    • spermatic cord

upper extremity

arm and shoulder

soft tissue of arm and shoulder

  • skin of arm and shoulder
  • muscles and tendons of arm and shoulder

skeleton of arm and shoulder

  • scapula
  • humerus

forearm

soft tissue of forearm

  • skin of forearm
  • muscles and tendons of forearm

skeleton of forearm

  • radius
  • ulna

hand

soft tissue of hand

  • skin of hand
  • muscles and tendons of hand

skeleton of hand

  • carpus
    • scaphoid
    • lunate
    • triquetrum
    • pisiform
    • trapezium
    • trapezoid
    • capitate
    • hamate
  • metacarpus
    • metacarpals
      • metacarpal I
      • metacarpal II
      • metacarpal III
      • metacarpal IV
      • metacarpal V
  • phalanges of hand

lower extremity

hip and thigh

soft tissue of hip and thigh

  • skin of hip and thigh
  • muscles and tendons of hip and thigh

skeleton of hip and thigh

  • femur

leg

soft tissue of leg
  • skin of leg
  • muscles and tendons of leg
skeleton of leg
  • tibia
  • peroneus

foot

soft tissue of foot
  • skin of foot
  • muscles and tendons of foot
skeleton of foot
  • tarsus
    • talus
    • calcaneus
    • navicular
    • first cuneiform
    • second cuneiform
    • third cuneiform
    • cuboid
  • metatarsus
    • metatarsals
      • metatarsal I
      • metatarsal II
      • metatarsal III
      • metatarsal IV
      • metatarsal V
  • phalanges of foot

peripheral nervous system

cranial nerves

  • olfactory nerve (CN I)
  • optic nerve (CN II)
  • oculomotor nerve (CN III)
  • rrochlear nerve (CN IV)
  • rrigeminal nerve (CN V)
  • abducent nerve (CN VI)
  • dacial nerve (CN VII)
  • intermediate nerve (CN VII b)
  • vestibulo-cochlear nerve (CN VIII)
  • glossopharyngeal nerve (CN IX)
  • vagal nerve (CN X)
  • accessory nerve (CN XI)
  • hypoglossal nerve (CN XII)

spinal nerves

nervous plexi and intercostal nerves

  • cervical plexus
    • lesser occipital nerve
    • great auricular nerve
    • transverse cervical nerve
    • supraclavicular nerve
    • ansa cervicalis
    • phrenic nerve
    • segmental nerve branches
      • segmental nerve branch C1
      • segmental nerve branch C2
      • segmental nerve branch C3
      • segmental nerve branch C4
  • brachial plexus
    • dorsal scapular nerve
    • suprascapular nerve
    • nerve to subclavius
    • lateral pectoral nerve
    • musculocutaneus nerve
    • axillary nerve
    • median nerve
    • ulnar nerve
    • radial nerve
    • medial cutaneous nerve of the arm
    • medial cutaneous nerve of the forearm
    • lower subscapular nerve
    • thoracodorsal nerve
    • medial pectoral nerve
    • upper subscapular nerve
    • long thoracic nerve
  • intercostal nerves
    • intercostal nerve I
    • intercostal nerve II
    • intercostal nerve III
    • intercostal nerve IV
    • intercostal nerve V
    • intercostal nerve VI
    • intercostal nerve VII
    • intercostal nerve VIII
    • intercostal nerve IX
    • intercostal nerve X
    • intercostal nerve XI
  • lumbosacral plexus
    • iliohypogastric nerve
    • ilioinguinal nerve
    • genitofemoral nerve
    • lateral cutaneous femoral nerve
    • femoral nerve
    • obturator nerve
    • accessory obturator nerve
    • sciatic nerve
      • common fibular nerve
      • tibial nerve
    • perforating cutaneous nerve
    • pudendal nerve
    • anococcigeal nerves

circulatory system

systemic arterial system

  • aorta
    • right coronary artery
    • left coronary artery
    • aortic arch
      • right brachiocephalic trunc
        • right subclavian artery
          • right vertebral artery
            • anterior spinal artery
            • posterior inferior cerebellar artery
            • basilar artery
              • anterior inferior cerebellar artery
              • pontine arteries
              • superior cerebellar artery
              • posterior cerebellar artery
          • internal thoracic artery
          • thyrocervical trunk
          • costocervical trunk
          • dorsal scapular artery
          • axillary artery
            • brachial artery
        • right common carotid artery
          • right external carotid artery
          • right internal carotid artery
            • right opthalmic artery
            • right anterior cerebral artery
              • anterior communicating artery
          • right middle cerebral artery
          • right posterior communicating artery
      • left common carotid artery
        • left external carotid artery
        • left internal carotid artery
          • see right internal carotid artery
      • left subclavian artery
        • see right subclavian artery
    • descending thoracic aorta
      • bronchial arteries
      • esophageal arteries
      • posterior intercostal arteries
    • abdominal aorta
      • inferior phrenic artery
      • celiac trunk
      • superior mesenteric artery
      • middle suprarenal artery
      • renal artery
      • gonadal (ovarian/testicular) artery
      • lumbar arteries
      • inferior mesenteric artery
      • median sacral artery
      • right common iliac artery
        • right external iliac artery
          • inferior epigastric artery
          • deep circumflex iliac artery
          • femoral artery
        • right internal iliac artery
          • right iliolumbar artery
          • right lateral sacral arteries
          • right superior gluteal artery
          • right obturator artery
          • right inferior gluteal artery
          • right umbilical artery
          • right uterine/deferential artery
          • right inferior vesical artery
          • right middle rectal artery
          • right internal pudendal artery
      • left common iliac artery
        • left external iliac artery
        • left internal iliac artery

systemic venous system

  • superior vena cava
  • inferior vena cava
  • azygos vein
  • hemyazygos vein
  • portal vein

pulmonary arterial system

  • right pulmonary artery
  • left pulmonary artery

pulmonary venous system

  • right superior pulmonary vein
  • right inferior pulmonary vein
  • left superior pulmonary vein
  • left inferior pulmonary vein

lymphatic system

lymphatic ducts

  • right lymphatic duct
  • thoracic duct

lymph node groups

  • cervical lymph nodes
  • supraclavicular lymph nodes
  • occipital lymph nodes
  • pre-auricular lymph nodes
  • infraclavicular lymph nodes
  • axillary lymph nodes
  • pectoral lymph nodes
  • epitrochlear/brachial lymph nodes
  • mediastinal lymph nodes
  • mesenteric lymph nodes
  • para-aortal lymph nodes
  • iliac lymph nodes
  • inguinal lymph nodes
  • femoral lymph nodes
  • popliteal lymph nodes

material

  • air
  • liquid

biological material

  • blood
  • cerebro-spinal fluid

tissue

  • gray matter
  • white matter
  • bone
  • cartilage
  • fat
  • connective tissue

pathology

  • tumor
  • edema
  • bleeding
  • necrosis
  • clot

segmentation regions

  • unsegmented region
  • background
  • annotation
    • annotation 1
    • annotation 2
    • annotation 3
    • annotation 4
    • annotation 5
    • annotation 6
    • annotation 7
    • annotation 8
    • annotation 9
    • annotation 10
    • annotation 11
    • annotation 12
    • annotation 13
    • annotation 14
    • annotation 15
    • annotation 16
  • user defined region
    • region 1
    • region 2
    • region 3
    • region 4
    • region 5
    • region 6
    • region 7
    • region 8
    • region 9
    • region 10
    • region 12
    • region 13
    • region 14
    • region 15
    • region 16