Documentation/Nightly/Acknowledgments
Contents
Citing Slicer
To acknowledge 3D Slicer as a platform, please cite the Slicer web site (http://www.slicer.org) and the following publication when publishing work that uses or incorporates 3D Slicer.
Plaintext
Fedorov A., Beichel R., Kalpathy-Cramer J., Finet J., Fillion-Robin J-C., Pujol S., Bauer C., Jennings D., Fennessy F., Sonka M., Buatti J., Aylward S.R., Miller J.V., Pieper S., Kikinis R. 3D Slicer as an Image Computing Platform for the Quantitative Imaging Network. Magn Reson Imaging. 2012 Nov;30(9):1323-41. PMID: 22770690.
BibTex
@article{fedorov20123d, title={3D Slicer as an image computing platform for the Quantitative Imaging Network}, author={Fedorov, Andriy and Beichel, Reinhard and Kalpathy-Cramer, Jayashree and Finet, Julien and Fillion-Robin, Jean-Christophe and Pujol, Sonia and Bauer, Christian and Jennings, Dominique and Fennessy, Fiona and Sonka, Milan and others}, journal={Magnetic resonance imaging}, volume={30}, number={9}, pages={1323--1341}, year={2012}, publisher={Elsevier} }
Note also that many of the modules are based on individual algorithms. The module documentation page typically provides a reference.
Funding Sources
Commercial partners
- Isomics uses 3D Slicer in a variety of academic and commercial research partnerships in fields such as planning and guidance for neurosurgery, quantitative imaging for clinical trials, clinical image informatics.
- Kitware Integral to continuing to support the 3D Slicer community, Kitware is also offering consulting services in response to the rapidly growing demand for the development of proprietary applications and commercial products based on 3D Slicer. Kitware has used 3D Slicer to rapidly prototype solutions in nearly every aspect of medical imaging and is also collaborating on the development of commercial pre-clinical and clinical products based on 3D Slicer.
Listed in alphabetical order.
Commercial Products Involving Slicer
- SonoVol is developing a whole-body ultrasound imaging system for small animals. This start-up company arose from research in the Department of Biomedical Engineering at the University of North Carolina at Chapel Hill.
- Xstrahl is developing a Small Animal Radiation Research Platform (SARRP) that uses 3D Slicer as its front-end application for radiation therapy beam placement and system control.
Listed in alphabetical order.
Grants
SlicerCMF
Date: 09/10/2013-08/31/2017 1R01DE024450 (PI Lucia Cevidanes, University of Michigan) QUANTIFICATION OF 3D BONY CHANGES IN TEMPOROMANDIBULAR JOINT OSTEOARTHRITIS
https://projectreporter.nih.gov/project_info_description.cfm?aid=8576556&icde=18353487
Slicer-Craniosynostosis:
NIH/NICHD R41HD081712
Slicer-Duke Prostate Registration:
NIH/NCI R41CA196565
Slicer-DiffusionMRI
Dates: 2015-09-22 2016-07-31 U01CA199459 (PI Lauren Jean O’Donnell, BWH) Open Source Diffusion MRI Technology For Brain Cancer Research
https://projectreporter.nih.gov/project_info_description.cfm?aid=8971083&icde=27026834
(also NCIGT and NAC, below, for diffusion)
Date: 15-AUG-2015 to 30-JUN-2020 P41EB015898 (PI Clare Tempany, BWH) Image Guided Therapy Center https://projectreporter.nih.gov/project_info_details.cfm?aid=8855115&icde=27026518
Date: 08/01/2013-05/31/2018 P41EB015902 (PI Ron Kikinis, BWH) NEUROIMAGING ANALYSIS CENTER https://projectreporter.nih.gov/project_info_description.cfm?aid=8971083&icde=27026834
Slicer-DWI
Dates: 1-APR-2012 to 28-FEB-2018 R01CA160902 ADVANCEMENT AND VALIDATION OF PROSTATE DIFFUSION AND SPECTROSCOPIC MRI https://projectreporter.nih.gov/project_info_description.cfm?aid=8817256&icde=27026677
Slicer-NCIGT
Date: 15-AUG-2015 to 30-JUN-2020 P41EB015898 (PI Clare Tempany, BWH) Image Guided Therapy Center https://projectreporter.nih.gov/project_info_details.cfm?aid=8855115&icde=27026518
Slicer-NIRView (Dartmouth):
NIH/NCI R01 CA184354
Slicer-OrthognathicTrac:
NIH/NIDCR R43DE024334
Slicer-PediatricRadiologicDecisionSupport
Date: 8/1/2012 - 7/31/2016 1R01EB014947 (PI Shawn Murphy, MGH) MI2B2 ENABLED PEDIATRIC RADIOLOGICAL DECISION SUPPORT
https://projectreporter.nih.gov/project_info_description.cfm?aid=8272742&icde=13552329
Slicer-PET/CT Calibration Phantom:
NIH/NCI R42CA167907
Slicer-PET-CT guided needle biopsy:
NCI/NIH grants 2R42CA153488-02A1, R41CA153488-01 and 3R42CA153488-03S1.
Slicer-ProstateBRP
Date: 1-AUG-2011 to 31-JUL-2016 R01CA111288 ENABLING TECHNOLOGIES FOR MRI-GUIDED PROSTATE INTERVENTIONS https://projectreporter.nih.gov/project_info_description.cfm?aid=8906771&icde=27026518
Slicer-ProstateQIN
Dates: 22-SEP-2010 to 31-JUL-2016 U01CA151261 QUANTITATIVE MRI OF PROSTATE CANCER AS A BIOMARKER AND GUIDE FOR TREATMENT https://projectreporter.nih.gov/project_info_description.cfm?aid=8707214&icde=27026645
Slicer-QIICR:
Dates: 4-SEP-2013 to 31-AUG-2018 U24 CA180918 (PI: Kikinis and Fedorov) Quantitative Image Informatics for Cancer Research (QIICR) https://projectreporter.nih.gov/project_info_description.cfm?aid=8911287&icde=27026906
Slicer-Radiomics-U01:
Date: 2015-01-09 to 2019-12-31 U01CA190234 (PI: Hugo Aerts, PhD (DFCI)) Genotype and Imaging Phenotype Biomarkers in Lung Cancer https://projectreporter.nih.gov/project_info_description.cfm?aid=8799943&icde=27026470
Slicer-TubeTK:
NIH/NIBIB: "In-field FAST procedure support and automation" (Aylward) 1R43EB016621
NIH/NINDS: "Multimodality image-based assessment system for traumatic brain injury" (PI: Aylward) 1R41NS081792
NIH/NCI: "Micro-tumor detection by quantifying tumor-induced vascular abnormalities" (PI: Dayton - UNC) 1R01CA170665
NIH/NCI: "Quantitative ultrasound analysis of vascular morphology for cancer assessment" (PI: Aylward and Dayton - UNC) 1R43CA165621