Difference between revisions of "Developer Meetings/20140826"
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* To get a stack trace via abort in ITK code: http://www.itk.org/Doxygen/html/classitk_1_1FloatingPointExceptions.html#adcb4de14da2419e8aaee1637bc375779 | * To get a stack trace via abort in ITK code: http://www.itk.org/Doxygen/html/classitk_1_1FloatingPointExceptions.html#adcb4de14da2419e8aaee1637bc375779 | ||
+ | |||
+ | * Associated stack trace is: | ||
+ | |||
+ | <pre> | ||
+ | Process 34046 stopped | ||
+ | * thread #1: tid = 0xc8383, 0x00000001002048b7 libN4ITKBiasFieldCorrectionLib.dylib`itk::N4BiasFieldCorrectionImageFilter<itk::Image<float, 3u>, itk::Image<unsigned char, 3u>, itk::Image<float, 3u> >::SharpenImage(this=0x0000000106af8ef0, unsharpenedImage=0x0000000107100e90) const + 2647 at itkN4BiasFieldCorrectionImageFilter.hxx:345, queue = 'com.apple.main-thread', stop reason = EXC_ARITHMETIC (code=EXC_I386_SSEEXTERR, subcode=0x1832) | ||
+ | frame #0: 0x00000001002048b7 libN4ITKBiasFieldCorrectionLib.dylib`itk::N4BiasFieldCorrectionImageFilter<itk::Image<float, 3u>, itk::Image<unsigned char, 3u>, itk::Image<float, 3u> >::SharpenImage(this=0x0000000106af8ef0, unsharpenedImage=0x0000000107100e90) const + 2647 at itkN4BiasFieldCorrectionImageFilter.hxx:345 | ||
+ | 342 for( unsigned int n = 1; n <= halfSize; n++ ) | ||
+ | 343 { | ||
+ | 344 F[n] = F[paddedHistogramSize - n] = vcl_complex<RealType>( scaleFactor * | ||
+ | -> 345 std::exp( -vnl_math_sqr( static_cast<RealType>( n ) ) * expFactor ), 0.0 ); | ||
+ | 346 } | ||
+ | 347 if( paddedHistogramSize % 2 == 0 ) | ||
+ | 348 { | ||
+ | </pre> |
Revision as of 19:10, 26 August 2014
Home < Developer Meetings < 20140826To discuss
- Release status
- BRAINSFit performance
- Mac hang on startup. See #3809
FPE Exception
$ ~/Support/cmake-3.0.1-Darwin64-universal/CMake.app/Contents/bin/ctest -R N4ITKBiasFieldCorrectionTest -VV UpdateCTestConfiguration from :/Users/kitware/Projects/Slicer-updated-vtk-Debug/Slicer-build/DartConfiguration.tcl Parse Config file:/Users/kitware/Projects/Slicer-updated-vtk-Debug/Slicer-build/DartConfiguration.tcl Add coverage exclude regular expressions. Add coverage exclude: /CMakeFiles/CMakeTmp/ Add coverage exclude: .*/moc_.* Add coverage exclude: .*/ui_.* Add coverage exclude: .*/qrc_.* Add coverage exclude: .*/Testing/.* Add coverage exclude: .*Python.cxx Add coverage exclude: .*PythonInit.cxx Add coverage exclude: .*/DesignerPlugins/.* Add coverage exclude: .*/generated_cpp/.* UpdateCTestConfiguration from :/Users/kitware/Projects/Slicer-updated-vtk-Debug/Slicer-build/DartConfiguration.tcl Parse Config file:/Users/kitware/Projects/Slicer-updated-vtk-Debug/Slicer-build/DartConfiguration.tcl Test project /Users/kitware/Projects/Slicer-updated-vtk-Debug/Slicer-build Constructing a list of tests Done constructing a list of tests Checking test dependency graph... Checking test dependency graph end test 452 Start 452: N4ITKBiasFieldCorrectionTest 452: Test command: /Users/kitware/Projects/Slicer-updated-vtk-Debug/Slicer-build/Slicer "--launcher-no-splash" "--launch" "/Users/kitware/Projects/Slicer-updated-vtk-Debug/Slicer-build/bin/N4ITKBiasFieldCorrectionTest" "--compare" "/Users/kitware/Projects/Slicer/Modules/CLI/N4ITKBiasFieldCorrection/Testing/../Data/Baseline/he3corrected.nii.gz" "/Users/kitware/Projects/Slicer-updated-vtk-Debug/Slicer-build/Testing/Temporary/he3corrected.nii.gz" "ModuleEntryPoint" "--maskimage" "/Users/kitware/Projects/Slicer/Testing/Data/Input/he3mask.nii.gz" "--outputbiasfield" "/Users/kitware/Projects/Slicer-updated-vtk-Debug/Slicer-build/Testing/Temporary/he3biasfield.nii.gz" "/Users/kitware/Projects/Slicer/Testing/Data/Input/he3volume.nii.gz" "/Users/kitware/Projects/Slicer-updated-vtk-Debug/Slicer-build/Testing/Temporary/he3corrected.nii.gz" 452: Test timeout computed to be: 1800 452: <filter-start> 452: <filter-name>N4BiasFieldCorrectionImageFilter</filter-name> 452: <filter-comment> "N4 Bias field correction" </filter-comment> 452: </filter-start> 452: FPE Signal Caught 452: X87CR: 37f 452: X87SR: 0 452: MXCSR: 1f80 452: signal: SIGFPE with code FPE_FLTUND 452: invalid flag: 0 452: divByZero flag: 0 452: error: [/Users/kitware/Projects/Slicer-updated-vtk-Debug/Slicer-build/bin/N4ITKBiasFieldCorrectionTest] exit abnormally - Report the problem. 1/1 Test #452: N4ITKBiasFieldCorrectionTest .....***Failed 2.27 sec 0% tests passed, 1 tests failed out of 1 Label Time Summary: N4ITKBiasFieldCorrection = 2.27 sec Total Test time (real) = 2.33 sec The following tests FAILED: 452 - N4ITKBiasFieldCorrectionTest (Failed) Errors while running CTest
- To get a stack trace via abort in ITK code: http://www.itk.org/Doxygen/html/classitk_1_1FloatingPointExceptions.html#adcb4de14da2419e8aaee1637bc375779
- Associated stack trace is:
Process 34046 stopped * thread #1: tid = 0xc8383, 0x00000001002048b7 libN4ITKBiasFieldCorrectionLib.dylib`itk::N4BiasFieldCorrectionImageFilter<itk::Image<float, 3u>, itk::Image<unsigned char, 3u>, itk::Image<float, 3u> >::SharpenImage(this=0x0000000106af8ef0, unsharpenedImage=0x0000000107100e90) const + 2647 at itkN4BiasFieldCorrectionImageFilter.hxx:345, queue = 'com.apple.main-thread', stop reason = EXC_ARITHMETIC (code=EXC_I386_SSEEXTERR, subcode=0x1832) frame #0: 0x00000001002048b7 libN4ITKBiasFieldCorrectionLib.dylib`itk::N4BiasFieldCorrectionImageFilter<itk::Image<float, 3u>, itk::Image<unsigned char, 3u>, itk::Image<float, 3u> >::SharpenImage(this=0x0000000106af8ef0, unsharpenedImage=0x0000000107100e90) const + 2647 at itkN4BiasFieldCorrectionImageFilter.hxx:345 342 for( unsigned int n = 1; n <= halfSize; n++ ) 343 { 344 F[n] = F[paddedHistogramSize - n] = vcl_complex<RealType>( scaleFactor * -> 345 std::exp( -vnl_math_sqr( static_cast<RealType>( n ) ) * expFactor ), 0.0 ); 346 } 347 if( paddedHistogramSize % 2 == 0 ) 348 {