Difference between revisions of "Documentation/Nightly/Extensions/Plastimatch"

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{{documentation/{{documentation/version}}/module-section|Introduction and Acknowledgements}}
 
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Acknowledgments:
 
This work is part of the National Alliance for Medical Image Computing (NAMIC), funded by ... <br>
 
Author:Greg Sharp<br>
 
Contributors: Jean-Christophe Fillion-Robin ({{collaborator|name|kitware}})<br>
 
Contact: Greg Sharp, <email>gcsharp@partners.org</email><br>
 
Website: http://plastimatch.org/<br>
 
License: [http://forge.abcd.harvard.edu/gf/project/plastimatch/scmsvn/?action=browse&path=%2F*checkout*%2Fplastimatch%2Ftrunk%2Fsrc%2Fplastimatch%2FLICENSE.TXT&revision=2388 BSD]
 
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{{documentation/{{documentation/version}}/extension-section|Extension Description}}
 
Plastimatch is an open source software for image computation. Our main focus is high-performance volumetric registration of medical images, such as X-ray computed tomography (CT), magnetic resonance imaging (MRI), and positron emission tomography (PET). Software features include:
 
 
 
*B-spline method for deformable image registration (GPU and multicore accelerated)
 
*Demons method for deformable image registration (GPU accelerated)
 
*ITK-based algorithms for translation, rigid, affine, demons, and B-spline registration
 
*Pipelined, multi-stage registration framework with seamless conversion between most algorithms and transform types
 
*Landmark-based deformable registration using thin-plate splines for global registration
 
*Landmark-based deformable registration using radial basis functions for local corrections
 
*Broad support for 3D image file formats (using ITK), including DICOM, Nifti, NRRD, MetaImage, and Analyze
 
*DICOM and DICOM-RT import and export
 
*XiO import and export
 
 
 
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{{documentation/{{documentation/version}}/extension-section|Modules}}
 
 
 
*[[Documentation/{{documentation/version}}/Modules/PlmBSplineDeformableRegistration|Plastimatch Automatic deformable image registration]]
 
*[[Documentation/{{documentation/version}}/Modules/PlmLANDWARP|Plastimatch LANDWARP Landmark]]
 
 
 
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{{documentation/{{documentation/version}}/extension-section|Use Cases}}
 
[http://plastimatch.org/data_sources.html Sample data] to use with modules.
 
<gallery widths="200px" perrow="4">
 
Image:plastimatch_dicomrt_ss.png|DICOM-RT Structure Set
 
Image:plastimatch_dicomrt_dose.png|DICOM-RT Dose
 
Image:plastimatch_image_1.png|Before Registration
 
Image:plastimatch_image_2.png|After Registration
 
Image:before_reg.png|Before Registration
 
Image:after_reg.png|After Registration
 
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File:Plastimatch tutorial ppt.png|[https://sourceforge.net/projects/plastimatch/files/Sample%20Data/3D_Slicer_Plastimatch_Registration_2015_12_29.pdf/download Download tutorial]
 
File:Plastimatch tutorial data.png|[https://sourceforge.net/projects/plastimatch/files/Sample%20Data/rider-lung-images.tar.gz/download Download tutorial data]
 
File:3D Slicer Plastimatch Landmark Registration Tutorial.png|[https://sourceforge.net/projects/plastimatch/files/Sample%20Data/3D_Slicer_Plastimatch_Landmark_Registration_Tutorial.ppt/download Download tutorial]
 
File:Fixed.png|[https://sourceforge.net/projects/plastimatch/files/Sample%20Data/landwarp-tutorial-images.zip/download Download tutorial data]
 
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{{documentation/{{documentation/version}}/extension-section|Similar Extensions}}
 
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{{documentation/{{documentation/version}}/extension-section|References}}
 
 
 
*G Sharp, N Kandasamy, H Singh, M Folkert, "GPU-based streaming architectures for fast cone-beam CT image reconstruction and demons deformable registration," Physics in Medicine and Biology, 52(19), pp 5771-83, 2007.
 
*V Boldea, G Sharp, SB Jiang, D Sarrut, "4D-CT lung motion estimation with deformable registration: Quantification of motion nonlinearity and hysteresis," Medical Physics, 33(3), pp 1008-18, 2008.
 
*Z Wu, E Rietzel, V Boldea, D Sarrut, G Sharp, "Evaluation of deformable registration of patient lung 4DCT with sub-anatomical region segmentations," Medical Physics, 35(2), pp 775-81, 2008.
 
*G Sharp et al. "Plastimatch - An open source software suite for radiotherapy image processing," Proceedings of the XVIth International Conference on the use of Computers in Radiotherapy, May, 2010.
 
*N. Shusharina, G. Sharp "Landmark-based image registration with analytic regularization", IEEE Trans. Med. Imag., submitted, 2011.
 
 
 
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{{documentation/{{documentation/version}}/extension-section|Information for Developers}}
 
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Latest revision as of 22:02, 4 January 2026

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