Slicer3:Module:Deformable BSpline registration - Revision history

Millerjv at 14:48, 29 October 2008

2008-10-29T14:48:09Z

Kikinis at 17:32, 4 June 2008

2008-06-04T17:32:40Z

Kikinis at 17:32, 4 June 2008

2008-06-04T17:32:26Z

Kikinis at 12:51, 30 May 2008

2008-05-30T12:51:42Z

Kikinis at 12:29, 30 May 2008

2008-05-30T12:29:10Z

Marianna at 20:04, 21 May 2008

2008-05-21T20:04:18Z

Marianna: 1 revision

2008-05-15T18:04:59Z

1 revision

Wjp at 14:59, 8 June 2007

2007-06-08T14:59:11Z

New page

Please copy the template linked below, paste it into this page and customize it with your module's information.

[[Slicer3:Module_Documentation_Template | http://www.na-mic.org/Wiki/index.php/Slicer3:Module_Documentation_Template ]]

@@ Line 1: / Line 1: @@
   [[Documentation|Return to Slicer Documentation]]
-This module was implemented by Jim Miller and is based on the ITK b-spline implementation.
+This module was implemented by Jim Miller and Bill Lorensen and is based on the ITK B-spline implementation.
 *Parameters:
-**Grid Size: smaller number means coarser grid. Higher number means finer grid. Start with coarse grid, create a resampled volume and use that as the moving image for the next run with a finer grid. '''Make sure you hit the tab key when changing the grid size'''.
+**Iterations: Number of iterations to run the optimization method to estimate the registration parameters.
 *IO
-**Intial Transform: If you ran the affine registration first, you can select that transformation as a start pose
+**Intial Transform: Initial transform for aligning the fixed and moving image. Maps positions in the fixed coordinate frame to positions in the moving coordinate frame. This transform should be an affine or rigid transform.  It is used an a bulk transform for the BSpline. Optional.
-** Output trasnform: is not fully functional yet
+**Fixed image: Fixed image to which to register
-** specify fixed and moving image
+**Moving image: Image to register to the fixed image
-** Output Volume: select create new volume
+** Output transform: Transform calculated that aligns the fixed and moving image. Maps positions from the fixed coordinate frame to the moving coordinate frame. Optional (specify an output transform or an output volume or both).
 * click Apply

← Older revision		Revision as of 17:32, 4 June 2008
Line 16:		Line 16:
	Image:NoBSpline1.png\|Data set that was to be deformed		Image:NoBSpline1.png\|Data set that was to be deformed
	Image:WildBSpline.png\|Data set after b-Spline with wrong parameters		Image:WildBSpline.png\|Data set after b-Spline with wrong parameters
		+	</gallery>

← Older revision		Revision as of 17:32, 4 June 2008
Line 10:		Line 10:
	** Output Volume: select create new volume		** Output Volume: select create new volume
	* click Apply		* click Apply
		+
		+	* Be careful how you set the parameters
		+
		+	<gallery>
		+	Image:NoBSpline1.png\|Data set that was to be deformed
		+	Image:WildBSpline.png\|Data set after b-Spline with wrong parameters

@@ Line 3: / Line 3: @@
 This module was implemented by Jim Miller and is based on the ITK b-spline implementation.
 *Parameters:
-**Grid Size: smaller number means coarser grid. Higher number means finer grid
+**Grid Size: smaller number means coarser grid. Higher number means finer grid. Start with coarse grid, create a resampled volume and use that as the moving image for the next run with a finer grid. '''Make sure you hit the tab key when changing the grid size'''.
 *IO
 **Intial Transform: If you ran the affine registration first, you can select that transformation as a start pose

← Older revision		Revision as of 12:29, 30 May 2008
Line 1:		Line 1:
−	~~Please copy the template linked below, paste it into this page and customize it with your module's information.~~	+	[[Documentation\|Return to Slicer Documentation]]

−	~~[[Slicer3~~:~~Module_Documentation_Template \| Slicer3~~:~~Module Documentation Template]]~~	+	This module was implemented by Jim Miller and is based on the ITK b-spline implementation.
		+	*Parameters:
		+	**Grid Size: smaller number means coarser grid. Higher number means finer grid
		+	*IO
		+	**Intial Transform: If you ran the affine registration first, you can select that transformation as a start pose
		+	** Output trasnform: is not fully functional yet
		+	** specify fixed and moving image
		+	** Output Volume: select create new volume
		+	* click Apply

← Older revision		Revision as of 20:04, 21 May 2008
Line 1:		Line 1:
	Please copy the template linked below, paste it into this page and customize it with your module's information.		Please copy the template linked below, paste it into this page and customize it with your module's information.

−	[[Slicer3:Module_Documentation_Template \| ~~http://www.na-mic.org/Wiki/index.php/~~Slicer3:~~Module_Documentation_Template~~ ]]	+	[[Slicer3:Module_Documentation_Template \| Slicer3:Module Documentation Template]]

← Older revision	Revision as of 18:04, 15 May 2008
(No difference)