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2009-01-10T02:24:54Z

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Csmendo: /* Module Name */

2008-08-11T19:23:11Z

Module Name

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[[Documentation|Return to Slicer Documentation]]
===Module Name===
Bubble Maker
{|
|+
| __TOC__
|[[Image:Caption.png|thumb|380px|]]
|[[Image:Caption6.jpg|thumb|380px|]]
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== General Information ==
This module builds a label image made of bubbles from a set of fiducials and a vector of radii. It is intended for use in combination with the interactive level-set evolution module, providing initialization for the evolution.

===Module Type & Category===

Type: CLI
Category: Level-Set Segmentation

===Authors, Collaborators & Contact===
* Author: Carlos S. Mendoza, Universidad de Sevilla
* Contact: carlos.sanchez.mendoza@gmail.com

===Module Description===
This module takes as input a set of fiducials, a vector of floats for the radii of the bubbles in physical units, a reference image on which the bubbles will take place, a label for the resulting label map. It provides a label image with spheres centered on the fiducials with radius corresponding to the radii vector position corresponding to the number of the concerned fiducial in the fiducial set.

===Examples, Use Cases & Tutorials===
{|
|[[Image:Caption.jpg|thumb|380px|Fiducials]]
|[[Image:Caption4.jpg|thumb|380px|Results]]
|}
{|
|[[Image:Caption5.jpg|thumb|380px|Fiducials]]
|[[Image:Caption6.jpg|thumb|380px|Results]]
|}

===Quick Tour of Features and Use===
There is only one panel available in this module:

{|
|[[Image:Captura2.jpg|thumb|280px|Panel]]

|
When placing the bubbles for a level-set segmentation, great care has to be taken in order
to produce the optimal seeding.

We want to create bubbles that are entirely inside the structure of interest.

A clever way to proceed is placing the bubbles as far away as possible from
suspected leaking points in the feature image ([[Slicer3:Modules:Target_Preprocessing-Documentation-3.2|Target Preprocessing]] should run before this module).
|}

===Known bugs===

Follow this [http://na-mic.org/Mantis/main_page.php link] to the Slicer3 bug tracker.

===Usability issues===

Follow this [http://na-mic.org/Mantis/main_page.php link] to the Slicer3 bug tracker. Please select the '''usability issue category''' when browsing or contributing.

===Source code & documentation===

Customize following [http://www.na-mic.org/ViewVC/index.cgi/ links] for your module.

[http://www.na-mic.org/Slicer/Documentation/Slicer3/html/ Links] to documentation generated by doxygen.

===Acknowledgment===
This work was developed on financial support from the University of Sevilla, Spain.
Most of the development took place in the Surgical Planning Laboratory, Harvard Medical School and Brigham and Women's Hospital, under the supervision of Mr. Steve Pieper Ph.D.

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