Marianna at 18:34, 21 May 2008

2008-05-21T18:34:21Z

Marianna: 1 revision

2008-05-15T18:52:13Z

1 revision

Andy: Update from Wiki

2006-12-18T13:40:58Z

Update from Wiki

New page

== Slicer Developers Meeting ==

March 1, 2005, 2-3pm, at 1249 Boylston St., second floor demo room.

'''Topic:''' Recap of the NA-MIC meeting

'''Present:''' Steve Pieper, Nicole Aucoin, Haiying Liu, Sonja Pujol, Katie Hayes, Mike Halle.

* the remodel of the 1249 Boylston office space is going to go ahead
* Andy Cedilnik should be here on Monday to work on redoing Slicer's build process, Steve will confirm
* Level sets for segmentation?
** Karl did VTK level sets
** Karl and Raul did itk, it's going into ITK
** fast marching by Eric Pichon, moving inot ITK as well
** seed based (with fiducials) segmentation with underlying ITK
** preview window for filters?
*** use subvolume module?
*** framework for itk filters is needed
* NA-MIC: set up dti, then frmi in ITK
* DTI class done by Jessica Turner at UCI, Michelle Perry at UCSD
* Qball in Slicer now for ODF visualisation
* spatial objects
* Matlab integration issues
** Core 1 and 3 of NA-MIC use it, 2 doesn't use it
** conversion path?
** conventions
** [http://www.octave.org/ Octave]? not as much support
** what do they use it for most?
** MEX to get C code for distributable Matlab binaries, need Matlab install of the demo version in order to run your binary
** can ship ITK images/code to Matlab
* vnl in slicer via ITK (templated), Raul's module for tensor reconstruction (Lauren doing clustering, direct)
* things the NA-MIC toolkit can offer:
** inherently parallel
** works for large memory requirement problems
** database access

'''Future Slicer Projects'''

* Mike: Michelle Porkin from Harvard/Smithsonian Astrophysics Observatory
** wants an astrophysics data reader for itk
** then put astro data in slicer for visualisation
** namic project
** support multichannel (multi wavelength) data
** from Chandra X-ray Observatory, pipeline to transfer coordinate systems
* Katie: Jeremy interested in using for visualising sonar data
** use itk
** proprocess from polar coordiantes for autonomous submarine surveys
* NA-MIC driving applications now rather than core
** stereo matching could go in
** star matching
* Sylvain put his uplaoded data in Nrrd format, readable by ITK IO factory
** they updated the Nrrd reader with spacing via direction vectors
** need orientation matrix
** right now adding mask bit (for example) in Nrrd format is hard to propagate into ITK - overhead, has to exist in ITK via the generic interface

<br /> [[Slicer:Developer_Meetings|Back to Meetings]]]

@@ Line 37: / Line 37: @@
 '''Future Slicer Projects'''
-* Mike: Michelle Porkin from Harvard/Smithsonian Astrophysics Observatory
+* Mike: Michelle Borkin from Harvard/Smithsonian Astrophysics Observatory
 ** wants an astrophysics data reader for itk
 ** then put astro data in slicer for visualisation
@@ Line 54: / Line 54: @@
 ** right now adding mask bit (for example) in Nrrd format is hard to propagate into ITK - overhead, has to exist in ITK via the generic interface
-<br /> [[Slicer:Developer_Meetings|Back to Meetings]]]
+[[Slicer:Developer_Meetings|Back to Meetings]]

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Slicer:Developer Meetings:20050301 - Revision history

Marianna at 18:34, 21 May 2008

Marianna: 1 revision

Andy: Update from Wiki