Modules:Volumes-Documentation - Revision history

Kikinis at 13:43, 8 June 2008

2008-06-08T13:43:45Z

2008-04-29T15:34:43Z

2008-04-28T20:47:53Z

2008-04-28T20:44:59Z

2008-04-28T20:44:42Z

2008-04-22T19:54:25Z

2008-04-22T01:37:53Z

2008-04-22T01:33:41Z

2008-04-12T00:50:53Z

2008-04-12T00:49:53Z

@@ Line 15: / Line 15: @@
 ** Window/Level can be set manually or automatically.
 ** Threshold is a way to make the background black disappear in the 3D view, when slices are turned to visible.
 ** For labelmaps you can select here the proper look-up table through the Color Select pull-down.
 ** For DWI volumes you can select a component of the volume to visualize.

@@ Line 22: / Line 22: @@
 * [[Modules:Volumes:Diffusion_Editor-Documentation| Diffusion Editor]]
 ** For DWI
-*** you can edit gradients manually or load existing gradients from file (.txt or .nhdr).
+*** editing gradients manually or load existing gradients from file (.txt or .nhdr).
-*** you can edit the measurement frame manually or simply rotate/swap/negate columns by selecting them.
+*** editing the measurement frame manually or simply rotate/swap/negate columns by selecting them.
-*** you can do some testing with the parameters by estimating a tensor and displaying glyphs and tracts.
+*** testing the parameters by estimating a tensor and displaying glyphs and tracts.
 ** For DTI
-*** you can edit the measurement frame as described above.
+*** editing the measurement frame as described above.
-*** you can do some testing by displaying glyphs and tracts.
+*** testing by displaying glyphs and tracts.
 * Glyph On Slices Display editor
 ** Controls the tensor glyphs visibility on individual slices in both 3D and 2D viewers.

@@ Line 20: / Line 20: @@
 ** For DTI volumes you can select a scalar drived component of the tensor volume (such as FA) to visualize.
 ** For DTI volumes you can control the tensor glyphs visualization on the slice planes using the Glyph On Slices Display editor described below.
-* Diffusion Editor
+* [[Modules:Volumes:Diffusion_Editor-Documentation| Diffusion Editor]]
 ** For DWI
 *** you can edit gradients manually or load existing gradients from file (.txt or .nhdr).
@@ Line 27: / Line 27: @@
 ** For DTI
 *** you can edit the measurement frame as described above.
-*** you can do some testing with displaying glyphs and tracts.
+*** you can do some testing by displaying glyphs and tracts.
 * Glyph On Slices Display editor
 ** Controls the tensor glyphs visibility on individual slices in both 3D and 2D viewers.

@@ Line 1: / Line 1: @@
   [[Documentation|Return to Slicer Documentation]]
-[[Image:VolumesModule.jpg|thumb|350px|right|overview]]
+[[Image:VolumesModule.jpg|right|overview]]
 * The Volumes Module loads, saves and adjusts display parameters of volume data.

@@ Line 1: / Line 1: @@
   [[Documentation|Return to Slicer Documentation]]
-[[Image:VolumesModule.png|thumb|350px|right|overview]]
+[[Image:VolumesModule.jpg|thumb|350px|right|overview]]
 * The Volumes Module loads, saves and adjusts display parameters of volume data.

@@ Line 7: / Line 7: @@
 ** select the volume that you want to load
 ** If needed edit the name that will be displayed for this volume inside slicer
-** If your volume is not a nrrd or dicom format, try loading with "centered" selected instead of from file.
+** If your volume is not a nrrd or dicom format, select "centered" for image origin, else select "from file".
 ** If this is a label map, click the box
 ** Active Volume: determines which volume is manipulated by the Display section. '''Make sure that you select the Volume that you intend to work on!'''