Modules:Transforms-Documentation-3.6 - Revision history

Alexy at 18:54, 30 April 2010

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2010-04-29T16:11:12Z

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Alexy: Created page with 'Return to Slicer 3.6 Documentation NOTOC ===Module Name=== Transforms The Data Module == General Infor…'

2010-03-30T15:39:34Z

Created page with 'Return to Slicer 3.6 Documentation __NOTOC__ ===Module Name=== Transforms thumb|350px|right|The Data Module == General Infor…'

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[[Documentation-3.6|Return to Slicer 3.6 Documentation]]

__NOTOC__
===Module Name===
Transforms
[[Image:TrnasformModule.png|thumb|350px|right|The Data Module]]

== General Information ==
===Module Type & Category===

Type: Interactive

Category: Base

===Authors, Collaborators & Contact===
* Alex Yarmarkovich, Isomics, SPL
* Contact: Alex Yarmarkovich, alexy@bwh.harvard.edu

===Module Description===
Create and edit transformations.

== Usage ==
Using Transforms module you can performs the following actions:
* Load transformations from the file. The file format is the ITK transformation
file format.
* Create new Transformation Nodes.
* Select existing Transformation Nodes for editing.
* Edit individual elements of the 4 by 4 transformation matrix.
* Specify the LR, PA, and IS translation components (mm).
* Specify the LR, PA, and IS rotation angles (degrees).
* Switch between different coordinate frames: local or global.
* Set the transformation matrix to identity.
* Invert the transformation matrix.

===Examples, Use Cases & Tutorials===
* Tutorial about [http://wiki.na-mic.org/Wiki/index.php/Slicer3:Training
loading and viewing data].

===Quick Tour of Features and Use===
* '''Load:''' Load transformations from the file. The file format is the ITK transformation
file format.
* '''Transform Editor:''' Edit a selected transformation node.

== Development ==

===Dependencies===

===Known bugs===

Follow this [http://na-mic.org/Mantis/main_page.php link] to the Slicer3 bug tracker.

===Usability issues===

Follow this [http://na-mic.org/Mantis/main_page.php link] to the Slicer3 bug tracker. Please select the '''usability issue category''' when browsing or contributing.

Follow this [http://viewvc.slicer.org/viewcvs.cgi/trunk/Base/GUI/ link] to
the vtkSlicerTransformsGUI and vtkSlicerTransformEditorWidget source code in ViewVC.

[http://www.na-mic.org/Slicer/Documentation/Slicer3-doc/html/classes.html Documentation] generated by doxygen.

== More Information ==

===Acknowledgment===

===References===

@@ Line 20: / Line 20: @@
 ===Module Description===
-The Transformations module creates and edits slicer Transformation nodes.
+The Transformations module creates and edits slicer Transformation nodes. Transformation nodes are used in Slicer to define spacial relationships between different nodes (such as volumes, models, fiducials, ROI's, or other Transform nodes) or between the nodes and the global RAS space. You can establish these relations by dragging the nodes under the Transformation nodes in the Data module.
 == Usage ==
 The Transforms module is used for interactive editing of Transformation nodes.
-Transformation nodes are used in Slicer to define spacial relationships between different nodes (such as volumes, models, fiducials, ROI's, or other Transform nodes) or between the nodes and the global RAS space. You can establish these relations by dragging the nodes under the Transformation nodes in the Data module. Transformation nodes can be both linear (expressed as 4 by 4 matrix) or non-linear warp transformations. The transformation module allow you to edit only linear Transformation nodes. The module can e used for example for manual registering of two images of the same subject accrued at different times or using different modalities. Automatic registration modules are also available in Slicer under the Registration category.
+Transformation nodes can be both linear (expressed as 4 by 4 matrix) or non-linear warp transformations. The transformation module allow you to edit only linear Transformation nodes. The module can e used for example for manual registering of two images of the same subject accrued at different times or using different modalities. Automatic registration modules are also available in Slicer under the Registration category.
 Using  Transforms module you can performs the following actions:

@@ Line 22: / Line 22: @@
 == Usage ==
 The Transforms module is used for interactive editing of Transformation nodes.
-Transformation nodes are used in Slicer to define spacial relationships between different nodes (such as volumes, models, fiducials, ROI's, or other Transform nodes) or between the nodes and the global RAS space. You can establish the spacial relations by dragging the nodes under the Transformation nodes in the Data module.
+Transformation nodes are used in Slicer to define spacial relationships between different nodes (such as volumes, models, fiducials, ROI's, or other Transform nodes) or between the nodes and the global RAS space. You can establish these relations by dragging the nodes under the Transformation nodes in the Data module. Transformation nodes can be both linear (expressed as 4 by 4 matrix) or non-linear warp transformations. The transformation module allow you to edit only linear Transformation nodes. The module can e used for example for manual registering of two images of the same subject accrued at different times or using different modalities. Automatic registration modules are also available in Slicer under the Registration category.
 Using  Transforms module you can performs the following actions:

@@ Line 4: / Line 4: @@
 ===Module Name===
 Transforms
-[[Image:TrnasformModule.png|thumb|350px|right|The Data Module]]
+{|
 == General Information ==

@@ Line 34: / Line 34: @@
 ===Examples, Use Cases & Tutorials===
-* Tutorial about [http://wiki.na-mic.org/Wiki/index.php/Slicer3:Training
+* Tutorial about [http://wiki.na-mic.org/Wiki/index.php/Slicer3:Training loading and viewing data].
 ===Quick Tour of Features and Use===

Modules:Transforms-Documentation-3.6 - Revision history

Alexy at 18:54, 30 April 2010

Alexy: /* Module Description */

Alexy: /* Module Name */

Alexy: /* Usage */

Alexy: /* Usage */

Kikinis: /* Examples, Use Cases & Tutorials */

Alexy: Created page with 'Return to Slicer 3.6 Documentation __NOTOC__ ===Module Name=== Transforms The Data Module == General Infor…'

Alexy: Created page with 'Return to Slicer 3.6 Documentation NOTOC ===Module Name=== Transforms The Data Module == General Infor…'