Modules:RegisterImages-Documentation-3.6 - Revision history

Grundlett: Text replacement - "\[http:\/\/www\.slicer\.org\/slicerWiki\/index\.php\/([^ ]+) ([^]]+)]" to "$2"

2019-11-27T02:23:46Z

Text replacement - "\[http:\/\/www\.slicer\.org\/slicerWiki\/index\.php\/([^ ]+) ([^]]+)]" to "$2"

2010-04-26T02:26:50Z

2010-03-28T17:48:24Z

New Features in 3.6

2010-03-28T17:46:39Z

New Features in 3.6

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Module Description

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Major Features

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Usage

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Wishlist

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Source code & documentation

2010-03-28T16:54:50Z

Advanced Initial Registration Parameters

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 *[[Media:Rigid registration of aligned images-03-2009.txt|some email about initialization]]
 *[http://www.na-mic.org/Wiki/index.php/ITK_Registration_Optimization ITK Registration optimization]
-*[http://www.slicer.org/slicerWiki/index.php/Slicer3:LinearRegistrationUseCases Slicer2 vs Slicer3 registration validation]
+*[[Slicer3:LinearRegistrationUseCases|Slicer2 vs Slicer3 registration validation]]
 *[http://www.batchmake.org/Wiki/Batchmake_slicer Using BatchMake with Slicer RegisterImages module]

← Older revision		Revision as of 02:26, 26 April 2010
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−	[Documentation-3.6\|Return to Slicer 3.6 Documentation]]	+	[[Documentation-3.6\|Return to Slicer 3.6 Documentation]]

	[[Announcements:Slicer3.6#Highlights\|Gallery of New Features]]		[[Announcements:Slicer3.6#Highlights\|Gallery of New Features]]

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 * Integration of transform nodes instead of reading/writing to files
 * Integration of landmark module for specifying initialization
 * Exposed metrics besides Mutual Information
 * Simplified parameters

@@ Line 29: / Line 29: @@
 ==== New Features in 3.6 ====
 * Integration of transform nodes instead of reading/writing to files
-* Integration of landmark module for specifying intialization
+* Integration of landmark module for specifying initialization
 * Exposed metrics besides Mutual Information
 * Simplified parameters

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 ===Module Description===
 This Module is an integrated framework providing access to ITK registration technologies. Algorithms can be run in single mode or pipelined. Depending on the size of the data sets, a significant amount of memory is needed. There is an option to trade off speed for memory. Most of the code is parallelized and will take advantage of multicore capabilities, if available.
 ==== Major Features ====

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 * SampleFromOverlap option allows images of vastly different sizes to be registered
 ** Helps to avoid (but does not completely eliminate) the annoying ITK exception, "too many samples falls outside of the image"
 * Based on an extensible and re-usable class structure.

← Older revision		Revision as of 17:06, 28 March 2010
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	* If you are planning to use the b-spline registration, be sure to read the [[Modules:RegisterImages-Documentation-3.4#Advanced_BSpline_Parameters\|discussion of parameter setting]] in the section below.		* If you are planning to use the b-spline registration, be sure to read the [[Modules:RegisterImages-Documentation-3.4#Advanced_BSpline_Parameters\|discussion of parameter setting]] in the section below.

		+	===Use Cases, Examples===
		+	See [http://na-mic.org/Wiki/index.php/Projects:RegistrationDocumentation:UseCaseInventory Registration Use Case project]

	===Quick Tour of Features and Use===		===Quick Tour of Features and Use===

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 ===Wishlist===
 *include moving filename into default names of results
 *display fixed and moving results in compareview with proper LUTs (different colors for fixed and result, apply w/l from moving to results volume

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 ===Source code & documentation===
-Customize following [http://viewvc.slicer.org/viewcvs.cgi/ links] for your module.
+Customize following [http://viewvc.slicer.org/viewcvs.cgi/trunk/Applications/CLI/RegisterImagesModule/ links] for your module.
 [http://www.na-mic.org/Slicer/Documentation/Slicer3-doc/html/ Links] to documentation generated by doxygen.

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 ** Two fiducial lists of corresponding points in the fixed and moving images.  Only selected fiducials are used and the fixed and moving landmarks must have the same number of landmarks in the same order.
 ** If supplied, then choose "Landmarks" as the initial registration method (see discussion on registration pipeline)
-|[[Image:RegisterImagesAdvancedInitialFiducials.png|thumb|380px|Initialization of rigid registration]]
+|[[Image:RegisterImagesAdvancedInitialFiducials-3.6.png|thumb|380px|Initialization of rigid registration]]
 |}