Modules:PolyDatToLabelMap-Documentation-3.6 - Revision history

Taox: /* Acknowledgment */

2010-04-30T15:11:17Z

Acknowledgment

Taox: /* Usability issues */

2010-04-30T14:10:56Z

Usability issues

Taox: /* Examples, Use Cases & Tutorials */

2010-04-30T01:49:02Z

Examples, Use Cases & Tutorials

Taox: /* Quick Tour of Features and Use */

2010-04-30T01:48:35Z

Quick Tour of Features and Use

Taox: /* Examples, Use Cases & Tutorials */

2010-04-30T01:42:31Z

Examples, Use Cases & Tutorials

Taox: /* Module Name */

2010-04-30T01:37:37Z

Module Name

Taox: /* Source code & documentation */

2010-04-30T01:27:48Z

Source code & documentation

Taox: /* Source code & documentation */

2010-04-30T01:25:43Z

Source code & documentation

Taox: /* Quick Tour of Features and Use */

2010-04-30T01:00:55Z

Quick Tour of Features and Use

Taox: Created page with 'Return to Slicer 3.6 Documentation NOTOC ===Module Name=== PolyData to LabelMap {| |GUI panel |[[Im…'

2010-04-30T00:59:57Z

Created page with 'Return to Slicer 3.6 Documentation __NOTOC__ ===Module Name=== PolyData to LabelMap {| |thumb|280px|GUI panel |[[Im…'

New page

[[Documentation-3.6|Return to Slicer 3.6 Documentation]]
__NOTOC__
===Module Name===
PolyData to LabelMap

{|
|[[Image:PolyDataToLabelMap-UI-3-6.png|thumb|280px|GUI panel]]
|[[Image:PolyDataToLabelMap-ViewingPanel-3-6.png|thumb|280px|Surface model and label map]]
|}

== General Information ==
===Module Type & Category===

Type: CLI

Category: Surface Models

===Authors, Collaborators & Contact===
* Author: Xiaodong Tao and Nicole Aucoin
* Contact: taox at research.ge.com

===Module Description===

This module creates a label map of the interior of an input model within a reference volume. The module first label voxels that intersects the surface as foreground, then use a flood fill to label all interior.

== Usage ==

===Examples, Use Cases & Tutorials===

* This module may be thought of as the inverse of Marching Cubes.

* A command line example:

===Quick Tour of Features and Use===
* '''Input/Output panels:'''

[[Image:CreateaDicomSeries-IOPanels-3-6.png|thumb|right|280px|Input/Output panels]]

* '''Parameters panel:'''
[[Image:CreateaDicomSeries-PatientPanels-3-6.png|thumb|right|280px|Patient Parameters]]

== Development ==

===Dependencies===

This module depends only on the core "Volumes" module of slice for data IO.

===Known bugs===

None.

===Usability issues===

None.

===Source code & documentation===

Source Code: [http://www.na-mic.org/ViewVC/index.cgi/trunk/Applications/CLI/PolyDataToLabelMap.cxx?view=annotate PolyDataToLabelmap.cxx]

XML Description: [http://www.na-mic.org/ViewVC/index.cgi/trunk/Applications/CLI/PolyDataToLabelmap.xml?view=co PolyDataToLabelmap.xml]

Test: [http://viewvc.na-mic.org/viewcvs.cgi/trunk/Applications/CLI/Testing/PolyDataToLabelmapTest.cxx?rev=11537&view=log PolyDataToLabelmapTest.cxx]

Usage:
<pre>
</pre>

== More Information ==

===Acknowledgment===
This work is part of the National Alliance for Medical Image
Computing (NAMIC), funded by the National Institutes of Health
through the NIH Roadmap for Medical Research, Grant U54 EB005149.
Information on the National Centers for Biomedical Computing
can be obtained from [http://www.ncbcs.org/ National Centers for Biomedical Computing].

===References===

@@ Line 34: / Line 34: @@
 <pre>
 ./PolyDataToLabelmap --distance 1.0
-                                          InputReferenceVolume.nrrd
+    InputReferenceVolume.nrrd
-                                          InputSurfaceModel.vtp
+    InputSurfaceModel.vtp
-                                          OutputLabelMap.nrrd
+    OutputLabelMap.nrrd
   </pre>

@@ Line 43: / Line 43: @@
 [[Image:PolyDatToLabelMap-IOPanels-3-6.png|thumb|right|280px|Input/Output panels]]
 * '''Parameters panel:'''
 [[Image:PolyDataToLabelMap-ParametersPanels-3-6.png|thumb|right|280px|Parameters Parameters]]
 == Development ==

@@ Line 64: / Line 64: @@
 Usage:
 <pre>
 </pre>

@@ Line 141: / Line 141: @@
 Information on the National Centers for Biomedical Computing
 can be obtained from [http://www.ncbcs.org/ National Centers for Biomedical Computing].
 ===References===

@@ Line 61: / Line 61: @@
 ===Usability issues===
-None.
+When the object has a geometry such that the centroid of all vertices lie outside of the object, the module will fail to generate the correct label for the object.
 ===Source code & documentation===

@@ Line 31: / Line 31: @@
 * This module may be thought of as the inverse of Marching Cubes.
 * A command line example:
 ===Quick Tour of Features and Use===

@@ Line 6: / Line 6: @@
 {|
 |[[Image:PolyDataToLabelMap-UI-3-6.png|thumb|280px|GUI panel]]
-|[[Image:PolyDataToLabelMap-ViewingPanel-3-6.png|thumb|280px|Surface model and label map]]
+|[[Image:PolyDataToLabelMap-ViewingPanel-3-6.png|thumb|280px|Surface model overlaid on ref image]]
 |}

@@ Line 56: / Line 56: @@
 ===Source code & documentation===
-Source Code: [http://www.na-mic.org/ViewVC/index.cgi/trunk/Applications/CLI/PolyDataToLabelMap.cxx?view=annotate  PolyDataToLabelmap.cxx]
+Source Code: [http://viewvc.slicer.org/viewcvs.cgi/trunk/Applications/CLI/PolyDataToLabelmap.cxx?rev=12452&view=log  PolyDataToLabelmap.cxx]
-XML Description: [http://www.na-mic.org/ViewVC/index.cgi/trunk/Applications/CLI/PolyDataToLabelmap.xml?view=co  PolyDataToLabelmap.xml]
+XML Description: [http://viewvc.slicer.org/viewcvs.cgi/trunk/Applications/CLI/PolyDataToLabelmap.xml?rev=9268&view=log  PolyDataToLabelmap.xml]
 Test: [http://viewvc.na-mic.org/viewcvs.cgi/trunk/Applications/CLI/Testing/PolyDataToLabelmapTest.cxx?rev=11537&view=log PolyDataToLabelmapTest.cxx]

Modules:PolyDatToLabelMap-Documentation-3.6 - Revision history

Taox: /* Acknowledgment */

Taox: /* Usability issues */

Taox: /* Examples, Use Cases & Tutorials */

Taox: /* Quick Tour of Features and Use */

Taox: /* Examples, Use Cases & Tutorials */

Taox: /* Module Name */

Taox: /* Source code & documentation */

Taox: /* Source code & documentation */

Taox: /* Quick Tour of Features and Use */

Taox: Created page with 'Return to Slicer 3.6 Documentation __NOTOC__ ===Module Name=== PolyData to LabelMap {| |GUI panel |[[Im…'

Taox: Created page with 'Return to Slicer 3.6 Documentation NOTOC ===Module Name=== PolyData to LabelMap {| |GUI panel |[[Im…'